Metagenome Family F096422

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F096422
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	56 residues
Representative Sequence	MRRREFITLLGGAAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPV
Number of Associated Samples	63
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.00 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	91.35 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.731 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.192 % of family members)
Environment Ontology (ENVO)	Unclassified (73.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04392	ABC_sub_bind	51.92
PF03401	TctC	12.50
PF02668	TauD	4.81
PF09084	NMT1	0.96
PF01258	zf-dskA_traR	0.96
PF00196	GerE	0.96
PF08734	GYD	0.96
PF03928	HbpS-like	0.96
PF00211	Guanylate_cyc	0.96
PF07110	EthD	0.96
PF11306	DUF3108	0.96
PF02518	HATPase_c	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	51.92
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	12.50
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.81
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.96
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.96
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.96
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.96
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.73 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.73 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.73 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.92 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	43.27 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.85 %
Unclassified	root	N/A	18.27 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.92 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.27 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	17.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.96 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	15.38 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Haematobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter	0.96 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.27 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	4.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.96 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.96 %
Haematobacter missouriensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter → Haematobacter missouriensis	0.96 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	18.27 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	4.81 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.92 %
Bradyrhizobium sp. Gha	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	0.96 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.96 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.96 %
Haematobacter missouriensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter → Haematobacter missouriensis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100272412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2335	Open in IMG/M
3300005332\|Ga0066388_101156820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1317	Open in IMG/M
3300005332\|Ga0066388_102159971	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300005332\|Ga0066388_102900446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	876	Open in IMG/M
3300005332\|Ga0066388_103853393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300005332\|Ga0066388_106262355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300005713\|Ga0066905_100116954	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300005713\|Ga0066905_100671906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	885	Open in IMG/M
3300005713\|Ga0066905_101903423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300005713\|Ga0066905_102325528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Haematobacter → Haematobacter missouriensis	501	Open in IMG/M
3300005764\|Ga0066903_101292173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1362	Open in IMG/M
3300005764\|Ga0066903_101444023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1295	Open in IMG/M
3300005764\|Ga0066903_101586369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1240	Open in IMG/M
3300005764\|Ga0066903_101946712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1127	Open in IMG/M
3300005764\|Ga0066903_105175689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	690	Open in IMG/M
3300009792\|Ga0126374_10941124	Not Available	673	Open in IMG/M
3300010043\|Ga0126380_10260200	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300010360\|Ga0126372_13247141	Not Available	505	Open in IMG/M
3300010361\|Ga0126378_10528384	All Organisms → cellular organisms → Bacteria → Proteobacteria	1295	Open in IMG/M
3300010362\|Ga0126377_10405282	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300010366\|Ga0126379_10119214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2392	Open in IMG/M
3300012349\|Ga0137387_10247842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1284	Open in IMG/M
3300012948\|Ga0126375_12049049	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012971\|Ga0126369_10610345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1162	Open in IMG/M
3300012971\|Ga0126369_11707958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	719	Open in IMG/M
3300016270\|Ga0182036_10538962	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300016270\|Ga0182036_10761664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	787	Open in IMG/M
3300016294\|Ga0182041_11535863	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300016294\|Ga0182041_12210760	Not Available	514	Open in IMG/M
3300016319\|Ga0182033_10215904	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300016319\|Ga0182033_10347997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1239	Open in IMG/M
3300016319\|Ga0182033_11084038	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300016341\|Ga0182035_11851737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300016357\|Ga0182032_10217758	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300016371\|Ga0182034_10748546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Gha	834	Open in IMG/M
3300016371\|Ga0182034_11060368	Not Available	702	Open in IMG/M
3300016371\|Ga0182034_11952873	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300016387\|Ga0182040_10251453	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300016387\|Ga0182040_10423328	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300016387\|Ga0182040_10631890	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300016404\|Ga0182037_10653837	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300016445\|Ga0182038_12087933	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300018468\|Ga0066662_10449560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1153	Open in IMG/M
3300031543\|Ga0318516_10107035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1584	Open in IMG/M
3300031543\|Ga0318516_10154697	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300031543\|Ga0318516_10574211	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031544\|Ga0318534_10379439	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300031545\|Ga0318541_10165214	All Organisms → cellular organisms → Bacteria → Proteobacteria	1218	Open in IMG/M
3300031545\|Ga0318541_10622279	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031572\|Ga0318515_10389672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300031724\|Ga0318500_10675926	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031736\|Ga0318501_10647048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	581	Open in IMG/M
3300031744\|Ga0306918_10195742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1521	Open in IMG/M
3300031763\|Ga0318537_10069126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1293	Open in IMG/M
3300031770\|Ga0318521_10176856	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300031780\|Ga0318508_1189762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031792\|Ga0318529_10527314	Not Available	549	Open in IMG/M
3300031793\|Ga0318548_10055186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1825	Open in IMG/M
3300031796\|Ga0318576_10213360	Not Available	909	Open in IMG/M
3300031821\|Ga0318567_10146435	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300031833\|Ga0310917_10230993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1243	Open in IMG/M
3300031833\|Ga0310917_10249024	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300031879\|Ga0306919_10142058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1742	Open in IMG/M
3300031879\|Ga0306919_10413035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1036	Open in IMG/M
3300031890\|Ga0306925_11471522	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300031890\|Ga0306925_12177789	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031894\|Ga0318522_10056882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1392	Open in IMG/M
3300031894\|Ga0318522_10357301	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300031896\|Ga0318551_10819330	Not Available	541	Open in IMG/M
3300031910\|Ga0306923_11316281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	765	Open in IMG/M
3300031942\|Ga0310916_10221936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1586	Open in IMG/M
3300031942\|Ga0310916_11184084	Not Available	632	Open in IMG/M
3300031946\|Ga0310910_10061445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2683	Open in IMG/M
3300031946\|Ga0310910_11437399	Not Available	530	Open in IMG/M
3300031947\|Ga0310909_10424520	Not Available	1116	Open in IMG/M
3300031947\|Ga0310909_10489418	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300031981\|Ga0318531_10072481	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300031981\|Ga0318531_10114695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1193	Open in IMG/M
3300031981\|Ga0318531_10271152	Not Available	766	Open in IMG/M
3300032001\|Ga0306922_10366558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1544	Open in IMG/M
3300032039\|Ga0318559_10346250	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300032041\|Ga0318549_10316295	Not Available	704	Open in IMG/M
3300032044\|Ga0318558_10190813	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300032044\|Ga0318558_10329039	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300032044\|Ga0318558_10644703	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300032055\|Ga0318575_10193076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1021	Open in IMG/M
3300032055\|Ga0318575_10522639	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300032059\|Ga0318533_10098671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2018	Open in IMG/M
3300032059\|Ga0318533_10171993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1541	Open in IMG/M
3300032064\|Ga0318510_10237731	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300032065\|Ga0318513_10319054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300032076\|Ga0306924_10165272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2537	Open in IMG/M
3300032076\|Ga0306924_10441296	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300032076\|Ga0306924_12248777	Not Available	554	Open in IMG/M
3300032091\|Ga0318577_10139623	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300032091\|Ga0318577_10422740	Not Available	636	Open in IMG/M
3300032094\|Ga0318540_10059887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1728	Open in IMG/M
3300032261\|Ga0306920_101031316	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300032261\|Ga0306920_101820724	Not Available	858	Open in IMG/M
3300033289\|Ga0310914_10174240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1911	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.58%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	73.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1002724124	3300005332	Tropical Forest Soil	VKRHAFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDC
Ga0066388_1011568203	3300005332	Tropical Forest Soil	VKRRQFITLLGDAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDCFP
Ga0066388_1021599711	3300005332	Tropical Forest Soil	MPFDQLYRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLARCGKIDCFPVACDQLV
Ga0066388_1029004461	3300005332	Tropical Forest Soil	VKRRNFITLIGATAAAWPLGALLIIAALVVAIPALAHSWYPLACCGNMDCFPVACD
Ga0066388_1038533931	3300005332	Tropical Forest Soil	MAFDQLKRRDFITLLGGAAAAWPLGALLIIAALVVAIPALAHSWYPLACCGNMDCFPVAC
Ga0066388_1062623551	3300005332	Tropical Forest Soil	MRRREFITLLGGAAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPV
Ga0066905_1001169541	3300005713	Tropical Forest Soil	MKRRELITLLGGAAAWPLAALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACD
Ga0066905_1006719062	3300005713	Tropical Forest Soil	MAQATAPVLDSTSRAFITLLGGAVAWPLAALLIVAALVAAIPALAHSWYPLACCGNMDCF
Ga0066905_1019034231	3300005713	Tropical Forest Soil	VKRREFITLLGGASVAWPLAALLIIAALVAAIPALAHSWYPLACCGNMD
Ga0066905_1023255281	3300005713	Tropical Forest Soil	MTVTIGRRELLVALGGAGATWPLAALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACD
Ga0066903_1012921731	3300005764	Tropical Forest Soil	VKRREFISLLGGSEAAWPLVALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACDQLV
Ga0066903_1014440233	3300005764	Tropical Forest Soil	VRRREFITLFGGSLAAAWPLAALLIIAALVAAVPALAHSWYPLACCGNMDCFPVAC
Ga0066903_1015863694	3300005764	Tropical Forest Soil	MRRREFITLLGGAAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMD
Ga0066903_1019467121	3300005764	Tropical Forest Soil	MRCREFILALGSVAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPV
Ga0066903_1051756892	3300005764	Tropical Forest Soil	MASYSARRKFLATLVGGAAAAWPLAALLIIAALVVAIPALAHSWYPLACCGNMDCFPVA
Ga0126374_109411241	3300009792	Tropical Forest Soil	MKRREFITLLGGASAAWPLATLLIVAALVAAIPGLAHSWYPLACCGNMDCFPVACDQLVETG
Ga0126380_102602001	3300010043	Tropical Forest Soil	MKRRDFITLLGGAAAWPLAALLIVAALVAAIPGLAHSWYPLVCCGNMDCF
Ga0126372_132471412	3300010360	Tropical Forest Soil	MPFDQLYRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLARCGKIDCFPVAC
Ga0126378_105283841	3300010361	Tropical Forest Soil	MIAKLKCRDFITLIGGAAAASPLRALLIIAALVVAIPALAHSWYPLACCGRIDCFPVACDQLVE
Ga0126377_104052823	3300010362	Tropical Forest Soil	MQFDQLRRREFITLLGGAAAAWPLAALLIIAALVVAIPALAHSWYPLACCGNMDCFPVACDQLVET
Ga0126379_101192141	3300010366	Tropical Forest Soil	VRRRAFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDCF
Ga0137374_103665061	3300012204	Vadose Zone Soil	MVFDQLKRREFITLLGGAAAAWPLAALLIVAALVAAIPALAHSWYPLA
Ga0137387_102478423	3300012349	Vadose Zone Soil	MKRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGQMDCFPIACDQLVETVS
Ga0126375_120490492	3300012948	Tropical Forest Soil	MSAKIKRRDFITLLGGAAAAWPLAALLIIAALVVAIPALAHSWYPLACCGNMDCFPVACDQLVETGS
Ga0126369_106103451	3300012971	Tropical Forest Soil	VKRRTFITLLGGAAATWPLAALLIVAALVGAIPALAHSWYPLACCGKID
Ga0126369_117079581	3300012971	Tropical Forest Soil	MIGRREFITLLGGAAATWPLAALLIIAALIAAIPALAHSWYPLACCGKID
Ga0182036_105389622	3300016270	Soil	MSRPKFITLLGGAAAAWPLAALLIIAALVAAIPALAHSWYPLACCGNMDCSPVACD
Ga0182036_107616642	3300016270	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFPVACDQL
Ga0182041_115358631	3300016294	Soil	MIAKLKRRDFITLIGGAAAASPLRALLIIAALVVAIPALAHSWYPLACCGNMDCFP
Ga0182041_122107601	3300016294	Soil	VKRREFISLVGGATAAWPLAALLIIAALVVAIPALAHSWYPLACCGNMDC
Ga0182033_102159041	3300016319	Soil	MSTRREFITLLGGTVAGWPIAALLIVAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVETGS
Ga0182033_103479973	3300016319	Soil	MTRRAFITLLGGVAAWPLAALLIVAALVAAIPALAHSWYPLACCGNIDCFP
Ga0182033_110840382	3300016319	Soil	MRRREFITLLGGGAAAWPLGALLIIAARVVAIPALAYSWYPLACCGKMDCFPVACDQLVETGSGWFYV
Ga0182035_118517372	3300016341	Soil	MKPREFVSLLGGAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVE
Ga0182032_102177582	3300016357	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFPVACDQLVET
Ga0182034_107485462	3300016371	Soil	MTATMRRREFITLLGGAAAWPLMALLIVAALVAAIPALAHSWYPLACCGNM
Ga0182034_110603683	3300016371	Soil	MRRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKMDCF
Ga0182034_119528731	3300016371	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFPVACDQLVETG
Ga0182040_102514533	3300016387	Soil	MTRRKFILALGSAAAWPLAAFLIVAALVAAIQALEHPWYPLACCGKMDCFPVACDQLVE
Ga0182040_104233281	3300016387	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIECF
Ga0182040_106318902	3300016387	Soil	MSRPKFITLLGGAAAAWPLAALLIIAALVAAIPALAHSWYPLACCGNMDCSP
Ga0182037_106538371	3300016404	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFPVACDQLVETGS
Ga0182038_120879332	3300016445	Soil	VKRRTFISLLGGAAGAWPLAALLIVAALVAAIPALAHSWYPLACCGNMDCF
Ga0066662_104495601	3300018468	Grasslands Soil	MKRRAFITLLGGAAAWPLAALFIVAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVET
Ga0209648_108100401	3300026551	Grasslands Soil	VSAHVRRREFITLVGGAAACPLAALLIVATLVAAIPALAHSWYPLACC
Ga0318516_101070351	3300031543	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGK
Ga0318516_101546973	3300031543	Soil	MTRRKFILALGSAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKMD
Ga0318516_105742112	3300031543	Soil	PLRTRREFITLLGGTVAGWPIAALLIVAALVAAIPALAHSWYPLACCGNMDCFPVACDQLAQLTRRRPR
Ga0318534_103794392	3300031544	Soil	MTATMKRRTFITLLGSAAAWPVAALLIVAALVAAIPALAHSWYPLACCGNIDCFP
Ga0318541_101652141	3300031545	Soil	MRRREFITLLGGGAAAWPLGALLIIAARVVAIPALAHSWYPLACCGKMDCFPVAC
Ga0318541_106222791	3300031545	Soil	MTRRKFILALGSAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKMDCFQVACDQ
Ga0318515_103896721	3300031572	Soil	MMRRREFIALLGGAAAAWPLAALLIIAALVAAIPALAHSWYPLACCGNMDCSPVACD
Ga0318500_106759261	3300031724	Soil	VKRRTFISLLGGAAGAWLLAALLIVAALVAAIPALAHSWYPLACCGNM
Ga0318501_106470482	3300031736	Soil	VKRRAFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDC
Ga0306918_101957423	3300031744	Soil	MKPREFVSLLGGAAAWPRGALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVET
Ga0318492_107839522	3300031748	Soil	VKRRTFISLLGGAAGAWPLAALLIVAALVAAIPALAHSWYPLACCG
Ga0318537_100691263	3300031763	Soil	VTRRAFITLLGGTVAAWPIAALLIVAALVAAIPALAHSWYPLACCGNMDCFPVACDQSVE
Ga0318521_101768561	3300031770	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHFWYPLACCGNMDCFP
Ga0318508_11897622	3300031780	Soil	MKPREFVSLLGGAAAWPLGALLIIAALVAAIPALAHSWYPLACCGKIDCFP
Ga0318529_105273142	3300031792	Soil	MQFGQLKRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGNIDCFP
Ga0318548_100551863	3300031793	Soil	VKRRTFISLLGGAAGAWLLAALLIVAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVE
Ga0318576_102133601	3300031796	Soil	MRRREFILALGSVAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVDGFGLVLRPDQQLVQA
Ga0318567_101464351	3300031821	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFPVACDQLVETGSG
Ga0310917_102309933	3300031833	Soil	MKPREFVSLLGGAAAWPRGALLIIAALVAAIPALAHSWYPLACCGNMD
Ga0310917_102490242	3300031833	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLAC
Ga0318495_103346842	3300031860	Soil	VKRRAFITLIGGAATWPLAALLIVAALVSAIPALAHSWYPLACCGN
Ga0306919_101420581	3300031879	Soil	MTAKMNRRSFITALGGAAAAWPLAALLIIAALVAAIPALAHSWYPLACCGN
Ga0306919_104130351	3300031879	Soil	VKRRAFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDCFP
Ga0306925_114715222	3300031890	Soil	MTATMRRREFITLLGGAAAWPLMALLIVAALVAAIPALAHSWYPLACCGNMDCF
Ga0306925_121777891	3300031890	Soil	MMKRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGNIDCF
Ga0318522_100568823	3300031894	Soil	VKRRTFISLLGGAAGAWLLAALLIVAALVAAIPALAHSWYPLACCGNMDC
Ga0318522_103573012	3300031894	Soil	MRRREFITLLGGGAAAWPLGALLIIAARVVAIPALAHSWYPLACCGNM
Ga0318551_108193302	3300031896	Soil	MRRAFITLLGGTVAAWPIAALLIVASLVAAIPALAHSWYPLACCGNMDCFPVACDQLVET
Ga0306923_113162812	3300031910	Soil	MSTRREFITLLGGTVAGWPIAALLIVAALVAAIPALAHSWYPLACCGNMDCFPVACDQLAQLTRRRPR
Ga0310916_102219363	3300031942	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFPVACDQLV
Ga0310916_111840842	3300031942	Soil	MSRPKFITLLGGAAAAWPLAALLIIAALVAAIPALAHSWYPLACCGNMDCSPVAC
Ga0310910_100614451	3300031946	Soil	MIAKLKRRDFITLIGGAAAASPLRALLIIAALVVAIPALAHSWYPLACCGNMDCFPVACDQLVETG
Ga0310910_114373991	3300031946	Soil	MPFDQLYRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLARCGKIDCLPVACDQLVETGSGWFYVP
Ga0310909_104245201	3300031947	Soil	MSRPKFITLLGGAAAAWPLAALLIIAALVAAIPALAHSWYPLACCGN
Ga0310909_104894182	3300031947	Soil	VKRREFITLLGSAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVET
Ga0318531_100724811	3300031981	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDC
Ga0318531_101146951	3300031981	Soil	VTRRAFITLLGGTVAAWPIAALLIVASLVAAIPALAHSWYPLACCGNMDCFPVACDQLV
Ga0318531_102711521	3300031981	Soil	MQFGQLKRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGNIDC
Ga0306922_103665581	3300032001	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCF
Ga0318559_103462502	3300032039	Soil	MRRREFITLLGGGAAAWPLGALLIIAARVVAIPALAHSWYPLACCGKMDCFPVACDQLV
Ga0318549_103162952	3300032041	Soil	MQFGQLKRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGNI
Ga0318558_101908131	3300032044	Soil	MRRREFITLLGGAAAAWPLGALLIIAALVVAIPALAHSWYPLACCGNMDCFPVACDQLVETG
Ga0318558_103290392	3300032044	Soil	MSRPKFITLLGGAAAAWPLAALLIIAALVAAIPALAHSWYPLACCGNMDCSPVACDQLVE
Ga0318558_106447032	3300032044	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGNMDCFP
Ga0318575_101930761	3300032055	Soil	VKRRTFISLLGGAAGAWLLAALLIVAALVAAIPALAHSWYPLACCGNMDCFPVACDQLAQ
Ga0318575_105226392	3300032055	Soil	VKRREFITLLGSAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACD
Ga0318533_100986716	3300032059	Soil	VRRREFITLLGGAAAAWPLAALLIVAALVAAIPALAHSWYPLACCGNMD
Ga0318533_101719934	3300032059	Soil	MKPREFVSLLGGAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFP
Ga0318510_102377312	3300032064	Soil	MRRREFITLFGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDCFP
Ga0318513_103190542	3300032065	Soil	MKPREFVSLLGGAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVETGSG
Ga0306924_101652721	3300032076	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFPVACDQLVE
Ga0306924_104412962	3300032076	Soil	VTRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDCFP
Ga0306924_122487771	3300032076	Soil	MKRMSLPLRTRREFITLLGGTVAGWPIAALLIVAALVAAIPALAHSWYPLACCGNMDCFPVAC
Ga0318577_101396232	3300032091	Soil	VTRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCGKIDCF
Ga0318577_104227401	3300032091	Soil	MQFGQLKRREFITLLGGAAAWPLAALLIVAALVAAIPALAHSWYPLACCG
Ga0318540_100598871	3300032094	Soil	MPFDQLYRRTFITLIGGAAAAWSLGALLIIAALVAAIPALAHSWYPLACCGKIDCFP
Ga0306920_1010313162	3300032261	Soil	MIAKLKRRDFITLIGGAAAASPLRALLIIAALVVAIPALAHSWYPLACCGNMDCFPVACD
Ga0306920_1018207241	3300032261	Soil	MASHIERRKFLATLGGAAAAWPLGALLIIAALVVAIPALAHSWYPLACCGNMDCFP
Ga0310914_101742401	3300033289	Soil	MKPREFVSLLGGAAAWPLGALLIIAALVAAIPALAHSWYPLACCGNMDCFPVACDQLVET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F096422

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences