NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096221

Metagenome Family F096221

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096221
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 66 residues
Representative Sequence MKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKDLSKKTKSLKEDEIWTTYYN
Number of Associated Samples 70
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 16.19 %
% of genes from short scaffolds (< 2000 bps) 79.05 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (69.524 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(55.238 % of family members)
Environment Ontology (ENVO) Unclassified
(60.952 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(68.571 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.64%    β-sheet: 20.21%    Coil/Unstructured: 69.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF12843QSregVF_b 29.52
PF00118Cpn60_TCP1 0.95
PF08279HTH_11 0.95
PF14743DNA_ligase_OB_2 0.95
PF00166Cpn10 0.95
PF00856SET 0.95
PF05565Sipho_Gp157 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 0.95
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A69.52 %
All OrganismsrootAll Organisms30.48 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001450|JGI24006J15134_10017472All Organisms → Viruses → Predicted Viral3363Open in IMG/M
3300001974|GOS2246_10164902All Organisms → Viruses → Predicted Viral1610Open in IMG/M
3300005658|Ga0066842_10095811Not Available554Open in IMG/M
3300006735|Ga0098038_1106511Not Available963Open in IMG/M
3300006737|Ga0098037_1072671Not Available1215Open in IMG/M
3300006738|Ga0098035_1079946All Organisms → Viruses → Predicted Viral1157Open in IMG/M
3300006751|Ga0098040_1029800All Organisms → Viruses → Predicted Viral1745Open in IMG/M
3300006752|Ga0098048_1089760Not Available934Open in IMG/M
3300006754|Ga0098044_1137244All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.985Open in IMG/M
3300006754|Ga0098044_1246530Not Available693Open in IMG/M
3300006789|Ga0098054_1022412All Organisms → Viruses → Predicted Viral2508Open in IMG/M
3300006789|Ga0098054_1059252Not Available1458Open in IMG/M
3300006789|Ga0098054_1107922All Organisms → Viruses → Predicted Viral1040Open in IMG/M
3300006789|Ga0098054_1163553Not Available819Open in IMG/M
3300006789|Ga0098054_1219512Not Available690Open in IMG/M
3300006793|Ga0098055_1211642Not Available735Open in IMG/M
3300006921|Ga0098060_1003668All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium5572Open in IMG/M
3300006921|Ga0098060_1067418Not Available1038Open in IMG/M
3300006923|Ga0098053_1105890Not Available566Open in IMG/M
3300006928|Ga0098041_1198754Not Available642Open in IMG/M
3300006929|Ga0098036_1070687All Organisms → Viruses → Predicted Viral1077Open in IMG/M
3300008050|Ga0098052_1140880Not Available959Open in IMG/M
3300008050|Ga0098052_1173470Not Available846Open in IMG/M
3300008050|Ga0098052_1254208Not Available671Open in IMG/M
3300008050|Ga0098052_1351422Not Available552Open in IMG/M
3300008416|Ga0115362_100002544All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU1572317Open in IMG/M
3300008416|Ga0115362_102204197Not Available919Open in IMG/M
3300008417|Ga0115363_10476146Not Available664Open in IMG/M
3300008470|Ga0115371_10371253Not Available732Open in IMG/M
3300009103|Ga0117901_1072315All Organisms → Viruses → Predicted Viral2153Open in IMG/M
3300009432|Ga0115005_11248482Not Available605Open in IMG/M
3300009481|Ga0114932_10820158Not Available539Open in IMG/M
3300009488|Ga0114925_10636396Not Available757Open in IMG/M
3300009488|Ga0114925_10690667Not Available728Open in IMG/M
3300009488|Ga0114925_10914736Not Available635Open in IMG/M
3300009488|Ga0114925_11189302Not Available559Open in IMG/M
3300009529|Ga0114919_10068572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium2604Open in IMG/M
3300009593|Ga0115011_10022505All Organisms → Viruses → Predicted Viral4211Open in IMG/M
3300009593|Ga0115011_10046939All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium2944Open in IMG/M
3300009593|Ga0115011_10446560All Organisms → Viruses → Predicted Viral1016Open in IMG/M
3300009593|Ga0115011_10519939Not Available947Open in IMG/M
3300009593|Ga0115011_10628365Not Available869Open in IMG/M
3300009790|Ga0115012_10849754Not Available743Open in IMG/M
3300010149|Ga0098049_1185938Not Available638Open in IMG/M
3300010149|Ga0098049_1214738Not Available588Open in IMG/M
3300010151|Ga0098061_1070388Not Available1332Open in IMG/M
3300010151|Ga0098061_1170957Not Available780Open in IMG/M
3300010153|Ga0098059_1052907All Organisms → Viruses → Predicted Viral1630Open in IMG/M
3300010153|Ga0098059_1061734All Organisms → Viruses → Predicted Viral1498Open in IMG/M
3300010153|Ga0098059_1350257Not Available561Open in IMG/M
3300010392|Ga0118731_114515896Not Available710Open in IMG/M
3300010883|Ga0133547_10334965Not Available3123Open in IMG/M
3300011013|Ga0114934_10489475Not Available544Open in IMG/M
3300011126|Ga0151654_1012911Not Available945Open in IMG/M
3300012920|Ga0160423_10026943All Organisms → Viruses → Predicted Viral4278Open in IMG/M
3300012920|Ga0160423_11036937Not Available549Open in IMG/M
3300012953|Ga0163179_10011404All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.5810Open in IMG/M
3300012953|Ga0163179_11025230Not Available721Open in IMG/M
3300013098|Ga0164320_10190576Not Available944Open in IMG/M
3300013098|Ga0164320_10244299Not Available846Open in IMG/M
3300013101|Ga0164313_10495753Not Available1016Open in IMG/M
3300013103|Ga0164318_10908747Not Available730Open in IMG/M
3300014903|Ga0164321_10675430Not Available538Open in IMG/M
3300014903|Ga0164321_10757038Not Available512Open in IMG/M
3300014913|Ga0164310_10381435Not Available832Open in IMG/M
3300017764|Ga0181385_1143406Not Available726Open in IMG/M
3300020345|Ga0211706_1110699Not Available550Open in IMG/M
3300020457|Ga0211643_10403218Not Available672Open in IMG/M
3300020472|Ga0211579_10004864All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon9632Open in IMG/M
3300021389|Ga0213868_10194133Not Available1222Open in IMG/M
3300024432|Ga0209977_10293442Not Available783Open in IMG/M
3300024432|Ga0209977_10487003Not Available576Open in IMG/M
3300024433|Ga0209986_10024329Not Available4000Open in IMG/M
(restricted) 3300024518|Ga0255048_10322191Not Available749Open in IMG/M
(restricted) 3300024521|Ga0255056_10519877Not Available558Open in IMG/M
3300025086|Ga0208157_1014524All Organisms → Viruses → Predicted Viral2514Open in IMG/M
3300025099|Ga0208669_1000118Not Available34630Open in IMG/M
3300025103|Ga0208013_1052504All Organisms → Viruses → Predicted Viral1104Open in IMG/M
3300025110|Ga0208158_1001738All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon6942Open in IMG/M
3300025118|Ga0208790_1034905All Organisms → Viruses → Predicted Viral1645Open in IMG/M
3300025118|Ga0208790_1206573Not Available514Open in IMG/M
3300025128|Ga0208919_1066293All Organisms → Viruses → Predicted Viral1208Open in IMG/M
3300025128|Ga0208919_1157980Not Available699Open in IMG/M
3300025131|Ga0209128_1014647Not Available3669Open in IMG/M
3300025131|Ga0209128_1104553Not Available908Open in IMG/M
3300025133|Ga0208299_1022650Not Available2753Open in IMG/M
3300025133|Ga0208299_1082944All Organisms → Viruses → Predicted Viral1120Open in IMG/M
3300025133|Ga0208299_1178631Not Available645Open in IMG/M
3300025141|Ga0209756_1039977All Organisms → Viruses → Predicted Viral2403Open in IMG/M
3300025156|Ga0209834_10390033Not Available502Open in IMG/M
3300025168|Ga0209337_1000158Not Available54412Open in IMG/M
(restricted) 3300027856|Ga0255054_10642665Not Available512Open in IMG/M
3300027858|Ga0209013_10195288All Organisms → Viruses → Predicted Viral1228Open in IMG/M
(restricted) 3300027868|Ga0255053_10515413Not Available578Open in IMG/M
3300027906|Ga0209404_10000631Not Available27060Open in IMG/M
3300027906|Ga0209404_10060569All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium2162Open in IMG/M
3300027906|Ga0209404_10300974All Organisms → Viruses → Predicted Viral1023Open in IMG/M
3300027906|Ga0209404_11193556Not Available524Open in IMG/M
(restricted) 3300028045|Ga0233414_10346814Not Available685Open in IMG/M
3300031773|Ga0315332_10134751All Organisms → Viruses → Predicted Viral1604Open in IMG/M
3300031775|Ga0315326_10362129Not Available945Open in IMG/M
3300032011|Ga0315316_10441428Not Available1092Open in IMG/M
3300032011|Ga0315316_11459744Not Available539Open in IMG/M
3300032278|Ga0310345_10164845All Organisms → Viruses → Predicted Viral1988Open in IMG/M
3300032820|Ga0310342_101091423Not Available940Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine55.24%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface7.62%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment6.67%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.81%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater3.81%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.86%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment2.86%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.90%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater1.90%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.90%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.90%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.95%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.95%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.95%
Marine Hydrothermal VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Hydrothermal Vent0.95%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.95%
MarineEnvironmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine0.95%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater0.95%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001974Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031EnvironmentalOpen in IMG/M
3300005658Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF86AEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008416Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12BEnvironmentalOpen in IMG/M
3300008417Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12TEnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009103Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7umEnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009488Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaGEnvironmentalOpen in IMG/M
3300009529Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaGEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300011126Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, 0.02EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300013101Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cmEnvironmentalOpen in IMG/M
3300013103Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay9, Core 4571-4, 0-3 cmEnvironmentalOpen in IMG/M
3300014903Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay12, Core 4567-28, 21-24 cmEnvironmentalOpen in IMG/M
3300014913Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay1, Core 4569-9, 0-3 cmEnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300020345Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX556079-ERR599137)EnvironmentalOpen in IMG/M
3300020457Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300024432Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024433Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300024521 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_1EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025156Marine hydrothermal vent microbial communities from Guaymas Basin, Gulf of California to study Microbial Dark Matter (Phase II) - Marker 14 Mat core 4569-2 3-6 cm metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300027856 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23EnvironmentalOpen in IMG/M
3300027858Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)EnvironmentalOpen in IMG/M
3300027868 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24006J15134_1001747283300001450MarineMKKKLKYICPQCRSKFETPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN*
GOS2246_1016490253300001974MarineMKKKLKYICPECRAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0066842_1009581113300005658MarinePECRAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0098038_110651113300006735MarineMKKKLKYICPQCRSKFESPQGITPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKE
Ga0098037_107267173300006737MarineMKKKLKYICPQCRSKFESPQGITPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0098035_107994643300006738MarineMKKKLKYICPECRAMYESHQGATPYIISWDDGHFCVPKLVGEEEIKKLSTKTKGLVEDEIWTTYYN*
Ga0098040_102980033300006751MarineMKKKLKYICPECRAMYESHQGATPYIISWDDGHFCVPKLVGEKEIKKLSNKTKGLVEDEIWTTYYN*
Ga0098048_108976023300006752MarineMKKKLKYICPQCRSKFESPQGITPFIVAWDDGHFCTPRLIGEEEVKDLSKKTNSLKEDEIWTTYYN*
Ga0098044_113724423300006754MarineMKKKLKYICGECKGEYEVPAGAVPYIISWSDGHFCAPVLIGEEEVKKLSNKTKNLAKDELWTTYYN*
Ga0098044_124653033300006754MarineMVYLQRINFYNKMKKNLKYICCECKGEYKVPAGGVPYIISWSDGHFCVPKLVGEEEVKELSKKTKTLKEDALWTTYYN*
Ga0098054_102241273300006789MarineMKKNLKYICCECKGEYKVPAGSLPYIISWNDGHFCVPKLVGEEEIKKLSEKTKTLEEDALWTTYYN*
Ga0098054_105925213300006789MarineMKKKLKYVCTQCRAIYEAESGAVPYIVSWSDGHFCAPKLIGEEEVKKLSNKTKNLAEDEL
Ga0098054_110792233300006789MarineMKKKLKYVCPECRAMYESAQGAVPYIISWSDGHFCVPKLIGEEEVKKLSNKTKNLAEDELWITYYN*
Ga0098054_116355323300006789MarineMKKKLKYVCLECRAMYESAQGAVPYIISWSDGHFCVPKLIGEEEVKKLSDKTKKLAESELWTTYYN*
Ga0098054_121951213300006789MarineMKKNLKYICCECKGEYKVPAGGVPYIISWSDGHFCVPKLVGEEEVKELSKKTKTLKEDALWTTYYN*
Ga0098055_121164233300006793MarineMKKNLKYICCECKGEYKVPAGSLPYIISWNDGHFCVPKLVGEEEIKKLSEKTKALEEDALWTTYYN*
Ga0098060_1003668223300006921MarineMKKKLKYICPQCRSKFESPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0098060_106741813300006921MarineMKKKLKYICPECRSMYESPAGATPFIVSWTDGHFCVPKLVGEEEVKDLSKKTKTLRDDEIWTTYYN*
Ga0098053_110589013300006923MarineMVYLQRINFYNKMKKNLKYICCECKGEYKVPAGGVPYIISWSDGHFCVPQLVGEEEVKKLSDKTKSLIDDDLWTTYYN*
Ga0098041_119875413300006928MarineMKKKLKYICPECKAMYEGPQGATPYIVSWNNGHFCTPRLVGEEEVKKLSDKTKDLKQDELWTTYYN*
Ga0098036_107068753300006929MarineMKKKLKYICPECRAMYESHQGATPYIISWNDGHFCVPKLVGEEEIKKLSNKTKSLVEDELWTTYYN*
Ga0098052_114088043300008050MarineMKKKLKYICGECKGVYESPAGAIPYIISWSDGHFCAPKLIGEEEIKELSEKTKTLEKDILWTTFYN*
Ga0098052_117347033300008050MarineMKKKLKYVCTQCRAIYEAESGAVPYIVSWSDGHFCAPKLIGEEEVKKLSNKTKNLAKDELWTTYYN*
Ga0098052_125420833300008050MarineMKKNLKYICCECKGEYKVPAGGVPYIISWSDGHFCVPQLVGEEEVKKLSDKTKSLIDDDLWTTYYN*
Ga0098052_135142233300008050MarineMKKKLKYICPECNARYEGPQGATPFIVAWNNGHFCEPKLIGEQEIKKLSNKTKELVEAELWTTYYN*
Ga0115362_10000254453300008416SedimentMKKKLKYICPEXXAMYEGPQGATPXIVSWXXGHFCTPRLXGEEEVKXXSXKTKXLXXDXXWTTYYN*
Ga0115362_10220419713300008416SedimentMKKKLKYICPECKAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKKLSDKTKDLKQDELWTTYYN*
Ga0115363_1047614623300008417SedimentMKKKLKYICPECRAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKDLSEKTKSLKEDEIWTTYYN*
Ga0115371_1037125313300008470SedimentMKKKLKYICGECKGVYESEAGAIPYIISWSDGHFCAPKLIGEEEIKELSEKTKGLEKDSLWLTFYN*
Ga0117901_107231513300009103MarineMKKKLKYVCPECRAMYESQQGATPYIISWDDGHFCVPKLIGEEEVKELSDKTKELVDDDLWTTYYN*
Ga0115005_1124848233300009432MarineCPECRSMYEAPQGAKPYIISWDDGHFCVPKLIGEEEVKELSNKTKSLKEDDLWITYYN*
Ga0114932_1082015823300009481Deep SubsurfaceNLMKKKLKYICPECKAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKKLSDKTESLRYDELWTTYYN*
Ga0114925_1063639623300009488Deep SubsurfaceMKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCTPRLIGEEEIKDLSEQTKSLKEDEIWTTYYN*
Ga0114925_1069066723300009488Deep SubsurfaceMKKKLKYVCPQCRARYESHQGAVPYIVSWSDGHFCTPRLIGEEEVKKLSDKTKSLVEDELWTTYYN*
Ga0114925_1091473623300009488Deep SubsurfaceMIKKLKYVCPECKAMYEGPQGATPFIVSWSDGHFCTPRLVGEEEVKNLSKKTQSLEEDDIWTTYYN*
Ga0114925_1118930233300009488Deep SubsurfaceMKKKLKYICPECRSRFESPQGVTPYIVAWDDGHFCTPRLIGEEEVKDLSKKTKTLKDDELWT
Ga0114919_1006857273300009529Deep SubsurfaceMKKKLKYICGECKGVYESPQGAIPYIISWSDGHFCAPKLIGEEEIKELSEKTKTLKEDDLWTTFYN*
Ga0115011_1002250583300009593MarineMKKKLKYMCPECKAMYEGPQGATPYIVAWNDGHFCTPRLVGEEEVKKLSDKTESLKHDELWTTYYN*
Ga0115011_10046939113300009593MarineMKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0115011_1044656043300009593MarineMKKKLKYICPQCRAMYESHQGATPYIISWDDGHFCTPRLIGEEEIKKLSDKTKSLKEDELWTTYYN*
Ga0115011_1051993923300009593MarineMKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCAPQLIGEEEVKDLSKKTKTLKDDELWTTYYN*
Ga0115011_1062836513300009593MarineMKKKLKYICPECKAMYEAPQGATPFIVSWNDGHFCTPRLVGEEEVKKLSDKTKSLKQDELWTTYYN*
Ga0115012_1084975423300009790MarineMKKKLKYIWPECRAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKDLSEKTNSLKEDEIWTTYYN*
Ga0098049_118593813300010149MarineYICPECRAMYESPAGATPFIVSWTDGHFCVPKLVGEEEVKDLSKKTKTLRDDEIWTTYYN
Ga0098049_121473833300010149MarineMKKKLKYICPECKAMYEGPQGATPFIVAWNDGHFCTPRLVGEEEVKKLSDKTKDLKQ
Ga0098061_107038843300010151MarineMKKKLKYICPECRGVYESPQGAVPYIVSWSDGHFCAPKLIGEEEVKKLSNKTKELAEAELWTTYYN*
Ga0098061_117095713300010151MarineMKKKLKYICGECKGVYESPAGAIPYIISWSDGHFCVPKLIGEEEIKELSEKTKTLKKDNLWTTFYN*
Ga0098059_105290743300010153MarineMKKKLKYICPECRAMYESPAGATPFIVSWTDGHFCVPKLVGEEEVKDLSKKTKTLRDDEIWTTYYN*
Ga0098059_106173463300010153MarineMKKKLKYICSECNARYEGPQGATPFIVAWNDGHFCEPKLIGEQEIKKLSNKTKELVEAELWTTYYN*
Ga0098059_135025713300010153MarineMKKKLKYICPQCRAMYESAQGAVPYIISWSDGHFCVPKLIGEEEVKKLSSKTKSLAEDDLWITY
Ga0118731_11451589623300010392MarineMKKKLKYICPECRSRFESPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKDDELWTTYYN*
Ga0133547_1033496593300010883MarineMKKKLKYICGECKGEYESPQGAIPYIISWDDGHFCVPKLIGEEEVKELSDKTKSLKEDSLWTTFYN*
Ga0114934_1048947523300011013Deep SubsurfaceMKKKLKYICPECRAMYESPAGATPFIVSWTDGHFCIPKLVGEEEVKDLSKKTKTLRDDEIWTTYYN*
Ga0151654_101291143300011126MarineMKKKLKYICPQCRSKFESPQGITPFIVSWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0160423_10026943153300012920Surface SeawaterMKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKDLSEKTKSLEEDEIWTTYYN*
Ga0160423_1103693723300012920Surface SeawaterMKKKLKYICPECKAMYEGPQGATPFIVSWNNGHFCTPRLVGEEEVKKLSDKTKSLKQDELWTTYYN*
Ga0163179_10011404103300012953SeawaterMKKKLKYICPECKAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKKLSNKTESLKYDELWTTYYN*
Ga0163179_1102523033300012953SeawaterMKKKLKYICGECKGEYEVPAGAIPYIISWSDGHFCAPVLIGEEEVKKLSNKTKSLVKDDLWTTYYN*
Ga0164320_1019057633300013098Marine SedimentMKKKLKYICPECKAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKKLSDKTKSLKHDELWTTYYN*
Ga0164320_1024429953300013098Marine SedimentMKKKLKYICPECRAMYEGPQGATPFIVSWSDGHFCTPRLIGEEEVKDLSKKTKSLQDDEIWTTYYN*
Ga0164313_1049575353300013101Marine SedimentMKKKLKYICPQCRSKFESPQGITPFIVAWDDGHFCTPRLIGEEEVKDLSKKTRSLKEDEIWTTYYN*
Ga0164318_1090874733300013103Marine SedimentMIKKLKYVCPECRAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKDLSEKTKSLEEDEIWTTYYN*
Ga0164321_1067543013300014903Marine SedimentQPLVQLQRSKLYNLMKKKLKYICPQCRSKFESPQGITPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0164321_1075703823300014903Marine SedimentMIKKLKYVCPECKAMYEGPQGATPFIISWNDGHFCTPRLVGEEEVKKLSEKTKSLKNDELWTTYYN*
Ga0164310_1038143513300014913Marine SedimentRSKLYNLMKKKLKYICPECRSRYEGPQGTTPFIVSWNDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN*
Ga0181385_114340613300017764SeawaterVQLQRSKLYNLMKKKLKYICPQCRSKFESPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTRSLKEDEIWTTYYN
Ga0211706_111069923300020345MarineMKKKLKYICPECRAKFESPQGVTPYIVAWDDGHFCTPRLIGEEEVKDLSKKTKTLKDDELWTTYYN
Ga0211643_1040321813300020457MarinePLVQLQRSNLYYLMKKKLKYICPECRAKFESPQGVTPYIVAWDDGHFCTPRLIGEEEVKNLSKKTKTLKDDELWTTYYN
Ga0211579_10004864183300020472MarineMKKKLKYICPECKAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKDLSKKTKSLKEDEIWTTYYN
Ga0213868_1019413313300021389SeawaterMKKKLKYICPKCRSRFESPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKDDELWTTYYN
Ga0209977_1029344223300024432Deep SubsurfaceMIKKLKYVCPECKAMYEGPQGATPFIVSWSDGHFCTPRLVGEEEVKNLSKKTQSLEEDDIWTTYYN
Ga0209977_1048700323300024432Deep SubsurfaceMKKKLKYICPECRSRFESPQGVTPYIVAWDDGHFCTPRLIGEEEVKDLSKKTKTLKDDELWTTYYN
Ga0209986_1002432983300024433Deep SubsurfaceMKKKLKYICGECKGVYESPQGAIPYIISWSDGHFCAPKLIGEEEIKELSEKTKTLKEDDLWTTFYN
(restricted) Ga0255048_1032219133300024518SeawaterMQKKLKYICSECRGIYESHQGATPYIISWDDGHFCVPKLIGEEEIKELSDKTKSLKEDDLWTTYYN
(restricted) Ga0255056_1051987723300024521SeawaterPECRSMYETPQGAKPYIISWDDGHFCVPKLIGEEEVKELSNKTKDLKEDDLWTTYYN
Ga0208157_1014524103300025086MarineMKKKLKYICPECKAMYEGPQGATPFIVAWNDGHFCTPRLVGEEEVKKLSDKTKDLKQDELWTTYYN
Ga0208669_1000118533300025099MarineMKKKLKYICPQCRSKFESPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN
Ga0208013_105250443300025103MarineMKKKLKYVCPECRAMYESAQGAVPYIISWSDGHFCVPKLIGEEEVKKLSNKTKNLAEDELWITYYN
Ga0208158_1001738133300025110MarineMKKKLKYICPECRSMYESPAGATPFIVSWTDGHFCVPKLVGEEEVKDLSKKTKTLRDDEIWTTYYN
Ga0208790_103490543300025118MarineMKKKLKYICPECRAMYESHQGATPYIISWDDGHFCVPKLVGEKEIKKLSNKTKGLVEDEIWTTYYN
Ga0208790_120657313300025118MarineMKKKLKYICGECKGEYEVPAGAVPYIISWSDGHFCAPVLIGEEEVKKLSNKTKNLAKDELWTTYYN
Ga0208919_106629313300025128MarineMKKKLKYICPECRAMYESHQGATPYIISWNDGHFCVPKLVGEEEIKKLSNKTKSLVEDELWTTYYN
Ga0208919_115798013300025128MarineMKKKLKYICPQCRSKFESPQGITPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN
Ga0209128_101464763300025131MarineMKKNLKYICCECKGEYKVPAGGVPYIISWSDGHFCVPKLVGEEEVKELSKKTKTLKEDALWTTYYN
Ga0209128_110455333300025131MarineMKKKLKYICGECKGVYESPAGAIPYIISWSDGHFCAPKLIGEEEIKELSEKTKTLKEDDLWTTFYN
Ga0208299_102265053300025133MarineMKKNLKYICCECKGEYKVPAGSLPYIISWNDGHFCVPKLVGEEEIKKLSEKTKTLEEDALWTTYYN
Ga0208299_108294433300025133MarineMKKKLKYVCTQCRAIYEAESGAVPYIVSWSDGHFCAPKLIGEEEVKKLSNKTKNLAKDELWTTYYN
Ga0208299_117863123300025133MarineMKKKLKYICGECKGVYESPAGAIPYIISWSDGHFCVPKLIGEEEIKELSEKTKTLKEDDLWTTFYN
Ga0209756_103997793300025141MarineMKKKLKYICPECRAMYESHQGATPYIISWDDGHFCVPKLVGEEEIKKLSTKTKGLVEDELWTTYYN
Ga0209834_1039003313300025156Marine Hydrothermal VentPECKAMYEGPQGATPFIVSWNDGHFCTPRLVGEEEVKKLSDKTKSLKHDELWTTYYN
Ga0209337_1000158683300025168MarineMKKKLKYICPQCRSKFETPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN
(restricted) Ga0255054_1064266513300027856SeawaterMKKKLKYICGECKGVYESPQGAIPYIISWSDGHFCAPKLIGEEEIKELSEKTKTL
Ga0209013_1019528843300027858MarineMKKKLKYICPECRSRFESPQGVTPFIVAWDDGHFCTPRLIGEEEVKDLSKKTKSLKEDEIWTTYYN
(restricted) Ga0255053_1051541333300027868SeawaterMQKKLKYICSECRGIYESHQGATPYIISWDDGHFCVPKLIGEEEIKELSDKTK
Ga0209404_10000631463300027906MarineMKKKLKYMCPECKAMYEGPQGATPYIVAWNDGHFCTPRLVGEEEVKKLSDKTESLKHDELWTTYYN
Ga0209404_1006056923300027906MarineMKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKDLSKKTKSLKEDEIWTTYYN
Ga0209404_1030097423300027906MarineMKKKLKYICPQCRAMYESHQGATPYIISWDDGHFCTPRLIGEEEIKKLSDKTKSLKEDELWTTYYN
Ga0209404_1119355623300027906MarineMKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCAPQLIGEEEVKDLSKKTKTLKDDELWTTYYN
(restricted) Ga0233414_1034681423300028045SeawaterMKKKLKYVCPECRAMYESAQGAVPYIISWSDGHFCVPKLIGEEEVKKLSNKTKNLAEDELWTTYYN
Ga0315332_1013475143300031773SeawaterMKKKLKYICPECRAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKNLSEKTKSLKEDEIWTTYYN
Ga0315326_1036212913300031775SeawaterMKKKLKYICPECKAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKNLSEKTKSLKEDEIWTTYYN
Ga0315316_1044142823300032011SeawaterMKKKLKYVCPECKAMYEGPQGATPFIVSWDDGHFCTPRLVGEEEVKDLSEKTKSLKEDEIWTTYYN
Ga0315316_1145974413300032011SeawaterMKKKLKYICPQCRSKFESPQGITPFIVAWDDGHFCTPRLIGEEEVKDLSKKTNSLKEDEIWTTYYN
Ga0310345_1016484573300032278SeawaterMKKKLKYICPECRGMYESPQGAVPYIISWNNGHFCVPKLVGEEEVKKLSNKTKELTEAELWTTYYN
Ga0310342_10109142323300032820SeawaterMKKKLKYICPECRGMYESPQGAVPYIVSWSDGHFCVPKLVGEEEVKKLSNKTKELTEAELWTTYYN


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