Metagenome / Metatranscriptome Family F096059

Basic Information
Family ID	F096059
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	40 residues
Representative Sequence	QRRASEAELAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Number of Associated Samples	99
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Most Common Taxonomy
Group	Bacteria (72.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.524 % of family members)
Environment Ontology (ENVO)	Unclassified (29.524 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.57% β-sheet: 0.00% Coil/Unstructured: 61.43%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02575	YbaB_DNA_bd	59.05
PF13662	Toprim_4	23.81
PF02132	RecR	6.67
PF03193	RsgA_GTPase	2.86
PF00633	HHH	2.86
PF04366	Ysc84	1.90
PF00929	RNase_T	0.95
PF02896	PEP-utilizers_C	0.95
PF13011	LZ_Tnp_IS481	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	59.05
COG0353	Recombinational DNA repair protein RecR	Replication, recombination and repair [L]	6.67
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	2.86
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.38 %
Unclassified	root	N/A	27.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.38 %
Unclassified	root	N/A	27.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.38 %
Unclassified	root	N/A	27.62 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.48 %
Unclassified	root	N/A	27.62 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	59.05 %
Unclassified	root	N/A	27.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.62 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	11.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.62 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886006\|SwRhRL3b_contig_2730924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	937	Open in IMG/M
3300005163\|Ga0066823_10109754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	575	Open in IMG/M
3300005363\|Ga0008090_15759491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	689	Open in IMG/M
3300005435\|Ga0070714_101431679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	675	Open in IMG/M
3300005541\|Ga0070733_10540871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	780	Open in IMG/M
3300005548\|Ga0070665_100727948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1005	Open in IMG/M
3300006034\|Ga0066656_10206938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1251	Open in IMG/M
3300006164\|Ga0075441_10143212	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
3300006354\|Ga0075021_10333736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	944	Open in IMG/M
3300006806\|Ga0079220_10532753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	813	Open in IMG/M
3300010049\|Ga0123356_10223220	All Organisms → cellular organisms → Bacteria → Proteobacteria	1942	Open in IMG/M
3300010358\|Ga0126370_11525617	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300010359\|Ga0126376_11829132	Not Available	646	Open in IMG/M
3300010360\|Ga0126372_11167896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	792	Open in IMG/M
3300010371\|Ga0134125_11131954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	856	Open in IMG/M
3300010373\|Ga0134128_12416604	Not Available	579	Open in IMG/M
3300010375\|Ga0105239_10917561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1005	Open in IMG/M
3300010387\|Ga0136821_1251141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1396	Open in IMG/M
3300010866\|Ga0126344_1327888	Not Available	523	Open in IMG/M
3300012361\|Ga0137360_11763997	Not Available	525	Open in IMG/M
3300012469\|Ga0150984_111632445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	834	Open in IMG/M
3300012930\|Ga0137407_12048520	Not Available	546	Open in IMG/M
3300012982\|Ga0168317_1030291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1482	Open in IMG/M
3300014325\|Ga0163163_11530235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	728	Open in IMG/M
3300015373\|Ga0132257_100182960	All Organisms → cellular organisms → Bacteria → Proteobacteria	2473	Open in IMG/M
3300015374\|Ga0132255_103315614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	686	Open in IMG/M
3300016341\|Ga0182035_11749074	Not Available	562	Open in IMG/M
3300016357\|Ga0182032_11829611	Not Available	531	Open in IMG/M
3300017947\|Ga0187785_10505921	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300017961\|Ga0187778_10346209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	967	Open in IMG/M
3300017970\|Ga0187783_10772610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	693	Open in IMG/M
3300017974\|Ga0187777_10550827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	809	Open in IMG/M
3300018001\|Ga0187815_10326709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	651	Open in IMG/M
3300018090\|Ga0187770_10055421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2866	Open in IMG/M
3300020070\|Ga0206356_10508536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1108	Open in IMG/M
3300020150\|Ga0187768_1127150	Not Available	585	Open in IMG/M
3300020581\|Ga0210399_10538179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	969	Open in IMG/M
3300021180\|Ga0210396_11329361	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300021402\|Ga0210385_10750446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	748	Open in IMG/M
3300021406\|Ga0210386_10685105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	884	Open in IMG/M
3300021439\|Ga0213879_10245009	Not Available	541	Open in IMG/M
3300021476\|Ga0187846_10188677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	866	Open in IMG/M
3300022528\|Ga0242669_1105140	Not Available	552	Open in IMG/M
3300025915\|Ga0207693_10118284	All Organisms → cellular organisms → Bacteria → Proteobacteria	2081	Open in IMG/M
3300025924\|Ga0207694_10451567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1073	Open in IMG/M
3300025929\|Ga0207664_10366856	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300025941\|Ga0207711_10084722	Not Available	2775	Open in IMG/M
3300026142\|Ga0207698_10793090	Not Available	949	Open in IMG/M
3300026342\|Ga0209057_1034705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2590	Open in IMG/M
3300027014\|Ga0207815_1048778	Not Available	508	Open in IMG/M
3300027521\|Ga0209524_1015216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1567	Open in IMG/M
3300027537\|Ga0209419_1077055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	658	Open in IMG/M
3300027546\|Ga0208984_1008495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1918	Open in IMG/M
3300027714\|Ga0209815_1146557	Not Available	755	Open in IMG/M
3300027855\|Ga0209693_10574581	Not Available	534	Open in IMG/M
3300027867\|Ga0209167_10113531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1397	Open in IMG/M
3300027867\|Ga0209167_10198745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1067	Open in IMG/M
3300027874\|Ga0209465_10056148	Not Available	1891	Open in IMG/M
3300027882\|Ga0209590_10814827	Not Available	592	Open in IMG/M
3300027889\|Ga0209380_10389304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	818	Open in IMG/M
3300027908\|Ga0209006_10989672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	670	Open in IMG/M
3300027910\|Ga0209583_10726787	Not Available	520	Open in IMG/M
3300028906\|Ga0308309_10110086	All Organisms → cellular organisms → Bacteria → Proteobacteria	2149	Open in IMG/M
3300030618\|Ga0311354_10145941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2588	Open in IMG/M
3300030737\|Ga0302310_10121768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1593	Open in IMG/M
3300031184\|Ga0307499_10219781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	593	Open in IMG/M
3300031507\|Ga0307509_10550948	Not Available	831	Open in IMG/M
3300031544\|Ga0318534_10069827	All Organisms → cellular organisms → Bacteria → Proteobacteria	1987	Open in IMG/M
3300031564\|Ga0318573_10098145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1500	Open in IMG/M
3300031573\|Ga0310915_10704455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	713	Open in IMG/M
3300031708\|Ga0310686_114285367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3944	Open in IMG/M
3300031713\|Ga0318496_10431556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	728	Open in IMG/M
3300031723\|Ga0318493_10144955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1225	Open in IMG/M
3300031744\|Ga0306918_10499455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	952	Open in IMG/M
3300031770\|Ga0318521_10503245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	728	Open in IMG/M
3300031782\|Ga0318552_10204551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	999	Open in IMG/M
3300031794\|Ga0318503_10083820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1002	Open in IMG/M
3300031796\|Ga0318576_10105221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1291	Open in IMG/M
3300031796\|Ga0318576_10172716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1013	Open in IMG/M
3300031798\|Ga0318523_10060875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1796	Open in IMG/M
3300031805\|Ga0318497_10036349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2485	Open in IMG/M
3300031805\|Ga0318497_10436009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	733	Open in IMG/M
3300031819\|Ga0318568_10086637	Not Available	1861	Open in IMG/M
3300031880\|Ga0318544_10430617	Not Available	513	Open in IMG/M
3300031894\|Ga0318522_10054561	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300031910\|Ga0306923_10272125	All Organisms → cellular organisms → Bacteria → Proteobacteria	1937	Open in IMG/M
3300031941\|Ga0310912_10261864	Not Available	1333	Open in IMG/M
3300031946\|Ga0310910_10791286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	747	Open in IMG/M
3300031962\|Ga0307479_10390605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1376	Open in IMG/M
3300031962\|Ga0307479_11552945	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300032009\|Ga0318563_10420835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	723	Open in IMG/M
3300032009\|Ga0318563_10787850	Not Available	509	Open in IMG/M
3300032010\|Ga0318569_10205366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	913	Open in IMG/M
3300032025\|Ga0318507_10476552	Not Available	543	Open in IMG/M
3300032055\|Ga0318575_10210795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	977	Open in IMG/M
3300032065\|Ga0318513_10364142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	705	Open in IMG/M
3300032068\|Ga0318553_10550668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	604	Open in IMG/M
3300032180\|Ga0307471_100484344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1382	Open in IMG/M
3300032180\|Ga0307471_103840352	Not Available	531	Open in IMG/M
3300032261\|Ga0306920_101763656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	875	Open in IMG/M
3300032892\|Ga0335081_10787855	Not Available	1138	Open in IMG/M
3300032896\|Ga0335075_10586196	Not Available	1108	Open in IMG/M
3300032955\|Ga0335076_10392297	Not Available	1273	Open in IMG/M
3300033158\|Ga0335077_10361760	Not Available	1569	Open in IMG/M
3300033289\|Ga0310914_11292158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.52%
Host-Associated	Host-Associated	10.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.81%
Plants	Host-Associated → Plants	9.52%
Aquatic	Environmental → Aquatic	5.71%
Arthropoda	Host-Associated → Arthropoda	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Freshwater	Environmental → Aquatic → Freshwater	1.90%
Marine	Environmental → Aquatic → Marine	1.90%
Sediment	Environmental → Aquatic → Sediment	1.90%
Peat	Environmental → Terrestrial → Peat	1.90%
Roots	Host-Associated → Plants → Roots	1.90%
Cave	Environmental → Terrestrial → Cave	0.95%
Geologic	Environmental → Terrestrial → Geologic	0.95%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.05%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.95%
Mine	Environmental → Terrestrial → Geologic → Mine	0.95%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	0.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.95%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.95%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.90%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.95%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.95%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.95%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.95%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.95%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886006	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010387	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 k-mer 51	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027714	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL3b_0930.00001570	2162886006	Switchgrass Rhizosphere	SLEEVEAAKRALEADPGAQALRERFGATLLPDTVRPLKN
Ga0066823_101097542	3300005163	Soil	AQRRASDSELAQARQAFEEDAGVKGLRERFGASVLPDSVRPVK*
Ga0008090_157594913	3300005363	Tropical Rainforest Soil	ASEAELAAARRAFEEDPAVKGLRERFGATVLPETVRPVK*
Ga0070714_1014316791	3300005435	Agricultural Soil	DQRVSQQELESARQAFDSDPGVQGLRERFGATLLPDTVRPVK*
Ga0070733_105408711	3300005541	Surface Soil	DQRVSQEEAESARRAFESDPGVQGFRDRFGATMVPETIRPVK*
Ga0070665_1007279483	3300005548	Switchgrass Rhizosphere	NLEELDSARQALESDPGVQALREKFGATLLPDSVRPLK*
Ga0066656_102069384	3300006034	Soil	ARRVSEQELAAARRTFEAEPGVQGLRERFGATVLPDSVRPVK*
Ga0075441_101432123	3300006164	Marine	AEQRASLEDLDSARRAFESDPGVQGLKERFGATLLPETVRPVK*
Ga0075021_103337361	3300006354	Watersheds	AQRRAAEQELAQARRAFDTDPGVKGLRERFGATVLPETVRPVK*
Ga0079220_105327531	3300006806	Agricultural Soil	PAQADQRVSQEEAEAARRAFESDPGVQGFRERFGATPVPETIRPVK*
Ga0123356_102232201	3300010049	Termite Gut	SPAQAAQSASQLELEAARRAFDTDPGVQGLRDRFGATVLPESVRPVK*
Ga0126370_115256173	3300010358	Tropical Forest Soil	ASEAELASARRAFEEDAGVKGLRDRFGATVLPDTVRPVK*
Ga0126376_118291321	3300010359	Tropical Forest Soil	RRASEAELTAARHAFDEDAGVKGLRERFGAAVLPETVRPVK*
Ga0126372_111678963	3300010360	Tropical Forest Soil	RATQQELSEARRAFDADPGVQGLRERFGATVLPDTVRPVK*
Ga0134125_111319543	3300010371	Terrestrial Soil	ERSSLEEIESARRAFEADPGVQGLRERFGATLLPDTVRPLKS*
Ga0134128_124166043	3300010373	Terrestrial Soil	SQQELEAARQAFESDPGVQGLRERFGATLLPDTVRPVK*
Ga0105239_109175611	3300010375	Corn Rhizosphere	DSARRALEADPGVQGLRERFGATLLPDTVRPLKSQE*
Ga0136821_12511414	3300010387	Sediment	QADAARQAFESDPGVRGFREQFAAEVMPETIRPQK*
Ga0126344_13278882	3300010866	Boreal Forest Soil	LDVARQAFETDPGVKSLRERFGATLLPDTIRPVK*
Ga0137360_117639971	3300012361	Vadose Zone Soil	QELDCARRAFEADPGVQGLRERFGATLLPETVRPVK*
Ga0150984_1116324453	3300012469	Avena Fatua Rhizosphere	EKRAVVEELDSARQLLESDPAVRALRDTFGATLLPDSVRPLK*
Ga0137407_120485202	3300012930	Vadose Zone Soil	AEQRASMEDLDAARRAFESDPGVQGLRERFGATLLPDTIRPVK*
Ga0168317_10302911	3300012982	Weathered Mine Tailings	QRVSQAELEAARQAFESDPGAQGLRERFGATLLPDTVRPVK*
Ga0163163_115302353	3300014325	Switchgrass Rhizosphere	VEELDSARQSLESDPAVRALRETFGATLLPDSVRPLK*
Ga0132257_1001829601	3300015373	Arabidopsis Rhizosphere	RRAARRAFEEDAGVKGLRERFGATVLPDTVRPVK*
Ga0132255_1033156141	3300015374	Arabidopsis Rhizosphere	PAQAQRSASEAELAAARRAFEDDAGVQSLRERFGATVLPDTVRPVK*
Ga0182035_117490741	3300016341	Soil	PAQAQRRASEAELTAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0182032_118296111	3300016357	Soil	SEAELGAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0187785_105059213	3300017947	Tropical Peatland	QRRASEEELAAARRAFEADPGVQGLRERFGATVLPESVRPVK
Ga0187778_103462091	3300017961	Tropical Peatland	EAELSAARRAFEEDPGVKGLRERFGATVLPDTVRPVK
Ga0187783_107726101	3300017970	Tropical Peatland	QRRASEAELVAARRAFEEDPAVKGLRERFGATVLPDTVRPVK
Ga0187777_105508271	3300017974	Tropical Peatland	AQRRASEEELAAARRAFEADPGVQGLRERFGATVLPESVRPLK
Ga0187815_103267091	3300018001	Freshwater Sediment	AGERASQEELEAARRAFESDPAVQGFRERFGAAPLPETIRPVK
Ga0187770_100554216	3300018090	Tropical Peatland	PALLARRASEAELAAAQRAFADDPGVRGLRERFGATVLSETVRPVK
Ga0206356_105085361	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	PAQAGERATQEEAEAARRAFESDPGVQGFRERFGATPLPETIRPLK
Ga0187768_11271502	3300020150	Tropical Peatland	RATQQELTEARRAFEADPGVQGLRERFGATVLPDTVRPVK
Ga0210399_105381793	3300020581	Soil	ELAAARRAFEADPGVQGLRERFGATVLPDSVRPVK
Ga0210396_113293611	3300021180	Soil	ELSVARRAFEADPNVQGLRERFGATVLPDTVRPVK
Ga0210385_107504461	3300021402	Soil	DEELASARRAFEDDAGVKGLRERFGATVLPDTVRPLK
Ga0210386_106851051	3300021406	Soil	RASQQELEAARQAFETDPGVKGLRERFGATLLPNTIRPVK
Ga0213879_102450091	3300021439	Bulk Soil	AQRASQQELAVARSAFEADPGVQGLRERFGATVLPDTVRPVK
Ga0187846_101886773	3300021476	Biofilm	AHAAQRASQQELTQARRAFETDPGVQGLRERFGATVLPDTVRPVK
Ga0242669_11051402	3300022528	Soil	AQRASQQELSSARRAFEADPGVQGLRERFGATVLPDTVRPLK
Ga0207693_101182844	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AQRRASEAELAAARRAFEEDAGVKGLRERFGATVLPDTVRPVK
Ga0207694_104515673	3300025924	Corn Rhizosphere	AEQRASQQELDNARQSFEADPGVQGLRERFGATLLPDTVRPVK
Ga0207664_103668564	3300025929	Agricultural Soil	AQRRASDTELAQARQAFEEDAGVKGLRERFGATVLPDSVRPVK
Ga0207711_100847225	3300025941	Switchgrass Rhizosphere	RASDTELAQARQAFEEDAGVKGLRERFGATVLPDSVRPVK
Ga0207698_107930901	3300026142	Corn Rhizosphere	SSQEEIDSARRALEADPGVQGLRERFGATLLPDTVRPLKSQE
Ga0209057_10347056	3300026342	Soil	VSEQELAAARRAFEADPGVQGLRERFGATVLPESVRPVK
Ga0207815_10487781	3300027014	Tropical Forest Soil	SETELAGARRAFEEDAGVKGLRERFGATVLPDTVRPVK
Ga0209524_10152161	3300027521	Forest Soil	EQELAAARRAFEADPGVQGLRERFGAAVLPDTVRPVK
Ga0209419_10770551	3300027537	Forest Soil	RRASEQELAAARRAFEADPGVQGLRERFGATVLPDSVRPVK
Ga0208984_10084954	3300027546	Forest Soil	RASEQELAAARRAFEADPGVQGLRERFGAAVLPDTVRPVK
Ga0209815_11465572	3300027714	Marine	AEQRASLEDLDSARRAFESDPGVQGLKERFGATLLPETVRPVK
Ga0209693_105745812	3300027855	Soil	DEELSVARRAFEEDAGVKGLRERFGATVLPDTVRPVK
Ga0209167_101135314	3300027867	Surface Soil	SDADLAVARQAFQEDPGVRGLRERFGATVLPETVRPVK
Ga0209167_101987453	3300027867	Surface Soil	ELTEVRRAFEADPGVQGLRERFGATVLPETVRPVK
Ga0209465_100561481	3300027874	Tropical Forest Soil	PAQAQRRATEAELSVARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0209590_108148272	3300027882	Vadose Zone Soil	RRARRVSEQELAAARRAFEADPGVQGLRERFGATVLTDSVRPVK
Ga0209380_103893041	3300027889	Soil	QAQRRASEAELAAARLAFEEDPAVKGLRERFGATVLPDTVRPVK
Ga0209006_109896723	3300027908	Forest Soil	ASMEDLDAARRAFESDPGVQGFRERFGATLLPDTVRPVK
Ga0209583_107267871	3300027910	Watersheds	LARRAAEAEQAAAQRAFEEDPGVRGLRERFGATVLPETVRPVK
Ga0308309_101100864	3300028906	Soil	RASDEELSVARRAFEEDAGVKGLRERFGATVLPDTVRPVK
Ga0311354_101459415	3300030618	Palsa	QLASARESLESDPGVQALRERFGATLLPDSVRPIK
Ga0302310_101217681	3300030737	Palsa	HASLAQLTAARESLESDPGVQALRERFGATLLTDTVRPIK
Ga0307499_102197811	3300031184	Soil	QRAVVEEFDSARQALETDPAVRALRETFGATLLPDSVRPLK
Ga0307509_105509481	3300031507	Ectomycorrhiza	MEDLDAARRAFESDPGVQGLKERFGATLLPETIRPVK
Ga0318534_100698274	3300031544	Soil	PDHAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0318573_100981451	3300031564	Soil	ASEAELGAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0310915_107044553	3300031573	Soil	RRASEAELTAARRAFEEDPAVKGLRERFGATVLPETVRPVK
Ga0310686_1142853671	3300031708	Soil	QRASQQELDVARQAFETDPGVKTLRERFGATLLPDTVRPIK
Ga0318496_104315561	3300031713	Soil	QRRASEAELAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0318493_101449551	3300031723	Soil	SQRRASEAELAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0306918_104994551	3300031744	Soil	ASEAELTSARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0318521_105032451	3300031770	Soil	QAQRRASEAELATARRAFDEDAGVKGLRERFGASVLPDTVRPLK
Ga0318552_102045513	3300031782	Soil	APAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0318503_100838201	3300031794	Soil	AETPAQAQRRASEAELGAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0318576_101052211	3300031796	Soil	EAELGAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0318576_101727161	3300031796	Soil	QAQRRASEAELASARRAFEEDAGVKGLRERFGATVLPDTVRPVK
Ga0318523_100608754	3300031798	Soil	AELSAARRAFDEDAGVKGLREHFGAAVLPETVRPVK
Ga0318497_100363491	3300031805	Soil	VAALAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0318497_104360093	3300031805	Soil	AELASARRAFEEDAGVKGLRERFGATVLPDTVRPVK
Ga0318568_100866374	3300031819	Soil	AQRRASEAELAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0318544_104306171	3300031880	Soil	AQRRASEAELSSARRAFDEDAGVKGLRDRFGAAVLPETVRPVK
Ga0318522_100545614	3300031894	Soil	ASEAELTAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0306923_102721254	3300031910	Soil	APPPRRARAAAPAAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0310912_102618641	3300031941	Soil	AQRRASEAELATARRAFEEDAGVKGLRERFGATVLPDTVRPVK
Ga0310910_107912861	3300031946	Soil	KRASEAELATARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0307479_103906054	3300031962	Hardwood Forest Soil	SEAELTAARRSFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0307479_115529453	3300031962	Hardwood Forest Soil	QRRASEAELAAARLAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0318563_104208351	3300032009	Soil	QAQRRAEEARLAKARQAFEADPGVQGLRERFGATVLPDTVRPLK
Ga0318563_107878502	3300032009	Soil	AELTAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0318569_102053661	3300032010	Soil	AQRRASEAELATARRAFDEDAGVKGLRERFGASVLPDTVRPVK
Ga0318507_104765522	3300032025	Soil	ELTSARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0318575_102107951	3300032055	Soil	RASEAELATARRAFDEDAGVRGLRERFGATVLPETVRPVK
Ga0318513_103641423	3300032065	Soil	RMHAARRAFEEDAGVKGLRERFGATVLPETVRPVK
Ga0318553_105506681	3300032068	Soil	SEAELTAARRAFDEDAGVKGLRERFGAAVLPETVRPVK
Ga0307471_1004843444	3300032180	Hardwood Forest Soil	LLARRLTEAELAAARRAFESDPGVQGLRERFGATVLPESVRPVK
Ga0307471_1038403521	3300032180	Hardwood Forest Soil	QAQRRASEQDLAAARRAFDADPGVATLRERFGAAVLPDTVRPVK
Ga0306920_1017636561	3300032261	Soil	ELESARRALEADPGVQGLRERFGATLLPETVRPVKS
Ga0335081_107878553	3300032892	Soil	ASDEELAAARRAFEDDAGVKGLRERFGATVLPETVRPVK
Ga0335075_105861963	3300032896	Soil	QEEIESARRAFEADPGVQGFRDRFGATPLAETIRPVK
Ga0335076_103922971	3300032955	Soil	LEDRDTARRAFESDPGVQGLRDRFGATLLPETVRPVK
Ga0335077_103617601	3300033158	Soil	GDAETPALIARRASEAELAAARRAFEDDPGVKGLRERFGASVLPETVRPVK
Ga0310914_112921583	3300033289	Soil	ELAAARRAFEDDPAVKGLRERFGATVLPDSVRPVK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096059

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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