NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F096027

Metagenome Family F096027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096027
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 63 residues
Representative Sequence MIDRTEEETLYRRIDKVEKLLRQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY
Number of Associated Samples 63
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 74.29 %
% of genes near scaffold ends (potentially truncated) 20.95 %
% of genes from short scaffolds (< 2000 bps) 83.81 %
Associated GOLD sequencing projects 45
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (57.143 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(72.381 % of family members)
Environment Ontology (ENVO) Unclassified
(93.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(95.238 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.91%    β-sheet: 0.00%    Coil/Unstructured: 44.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF137592OG-FeII_Oxy_5 20.95
PF00856SET 8.57
PF136402OG-FeII_Oxy_3 6.67
PF08534Redoxin 1.90
PF01612DNA_pol_A_exo1 0.95
PF00011HSP20 0.95
PF00271Helicase_C 0.95
PF00476DNA_pol_A 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.95
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.14 %
All OrganismsrootAll Organisms42.86 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001731|JGI24514J20073_1008026All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1227Open in IMG/M
3300006166|Ga0066836_10931810All Organisms → cellular organisms → Bacteria → Proteobacteria524Open in IMG/M
3300006736|Ga0098033_1093666All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium857Open in IMG/M
3300006738|Ga0098035_1220529Not Available629Open in IMG/M
3300006738|Ga0098035_1234170Not Available607Open in IMG/M
3300006750|Ga0098058_1134755Not Available657Open in IMG/M
3300006750|Ga0098058_1191562Not Available533Open in IMG/M
3300006751|Ga0098040_1038067Not Available1521Open in IMG/M
3300006751|Ga0098040_1041328All Organisms → cellular organisms → Bacteria → Proteobacteria1451Open in IMG/M
3300006752|Ga0098048_1191080All Organisms → cellular organisms → Bacteria → Proteobacteria605Open in IMG/M
3300006753|Ga0098039_1015151Not Available2805Open in IMG/M
3300006753|Ga0098039_1088354Not Available1070Open in IMG/M
3300006753|Ga0098039_1138380Not Available834Open in IMG/M
3300006753|Ga0098039_1235168Not Available618Open in IMG/M
3300006754|Ga0098044_1201457All Organisms → cellular organisms → Bacteria → Proteobacteria783Open in IMG/M
3300006754|Ga0098044_1217641Not Available747Open in IMG/M
3300006754|Ga0098044_1258405Not Available673Open in IMG/M
3300006754|Ga0098044_1393485Not Available522Open in IMG/M
3300006789|Ga0098054_1023728All Organisms → cellular organisms → Bacteria → Proteobacteria2430Open in IMG/M
3300006789|Ga0098054_1023834All Organisms → cellular organisms → Bacteria → Proteobacteria2425Open in IMG/M
3300006789|Ga0098054_1028348Not Available2197Open in IMG/M
3300006789|Ga0098054_1068710Not Available1342Open in IMG/M
3300006789|Ga0098054_1300509Not Available574Open in IMG/M
3300006789|Ga0098054_1337837Not Available536Open in IMG/M
3300006793|Ga0098055_1064299Not Available1459Open in IMG/M
3300006793|Ga0098055_1128724All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300006793|Ga0098055_1311125Not Available588Open in IMG/M
3300006793|Ga0098055_1408039All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300006902|Ga0066372_10570867Not Available671Open in IMG/M
3300006921|Ga0098060_1112792Not Available765Open in IMG/M
3300006921|Ga0098060_1205588All Organisms → cellular organisms → Bacteria → Proteobacteria537Open in IMG/M
3300006922|Ga0098045_1075126All Organisms → cellular organisms → Bacteria → Proteobacteria812Open in IMG/M
3300006923|Ga0098053_1105593Not Available567Open in IMG/M
3300006924|Ga0098051_1100983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium774Open in IMG/M
3300006924|Ga0098051_1130046Not Available669Open in IMG/M
3300006924|Ga0098051_1132456Not Available662Open in IMG/M
3300006924|Ga0098051_1141130Not Available638Open in IMG/M
3300006925|Ga0098050_1054452All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300006925|Ga0098050_1100260All Organisms → cellular organisms → Bacteria → Proteobacteria741Open in IMG/M
3300006926|Ga0098057_1053932All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.985Open in IMG/M
3300006927|Ga0098034_1120457Not Available746Open in IMG/M
3300006928|Ga0098041_1271674Not Available540Open in IMG/M
3300006929|Ga0098036_1043630All Organisms → cellular organisms → Bacteria → Proteobacteria1398Open in IMG/M
3300007963|Ga0110931_1084235Not Available959Open in IMG/M
3300008050|Ga0098052_1030405All Organisms → cellular organisms → Bacteria2460Open in IMG/M
3300008050|Ga0098052_1284669All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium627Open in IMG/M
3300008050|Ga0098052_1291956All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium617Open in IMG/M
3300008050|Ga0098052_1407822Not Available504Open in IMG/M
3300008216|Ga0114898_1010869All Organisms → cellular organisms → Bacteria3508Open in IMG/M
3300008216|Ga0114898_1021332Not Available2252Open in IMG/M
3300008216|Ga0114898_1098350Not Available877Open in IMG/M
3300008216|Ga0114898_1148159All Organisms → cellular organisms → Bacteria → Proteobacteria677Open in IMG/M
3300008217|Ga0114899_1001339Not Available14622Open in IMG/M
3300008220|Ga0114910_1030155All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300009412|Ga0114903_1014529All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.2139Open in IMG/M
3300009412|Ga0114903_1125542Not Available563Open in IMG/M
3300009481|Ga0114932_10001636Not Available25062Open in IMG/M
3300009593|Ga0115011_10759945Not Available799Open in IMG/M
3300009593|Ga0115011_11176890All Organisms → cellular organisms → Bacteria → Proteobacteria659Open in IMG/M
3300009603|Ga0114911_1064875All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300009603|Ga0114911_1083553Not Available948Open in IMG/M
3300009604|Ga0114901_1072347All Organisms → cellular organisms → Bacteria1135Open in IMG/M
3300009620|Ga0114912_1023074All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.1736Open in IMG/M
3300009790|Ga0115012_10902247All Organisms → cellular organisms → Bacteria → Proteobacteria723Open in IMG/M
3300009790|Ga0115012_12041589Not Available509Open in IMG/M
3300010149|Ga0098049_1085118All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium994Open in IMG/M
3300010150|Ga0098056_1022867Not Available2220Open in IMG/M
3300010150|Ga0098056_1103427Not Available971Open in IMG/M
3300010150|Ga0098056_1106367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium956Open in IMG/M
3300010150|Ga0098056_1297143Not Available532Open in IMG/M
3300017775|Ga0181432_1015720Not Available1905Open in IMG/M
3300017775|Ga0181432_1043242All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.1243Open in IMG/M
3300017775|Ga0181432_1114133Not Available813Open in IMG/M
3300017775|Ga0181432_1127642Not Available771Open in IMG/M
3300024344|Ga0209992_10000356Not Available62168Open in IMG/M
3300025045|Ga0207901_1008366Not Available1468Open in IMG/M
3300025066|Ga0208012_1003959All Organisms → cellular organisms → Bacteria3172Open in IMG/M
3300025072|Ga0208920_1093000Not Available559Open in IMG/M
3300025084|Ga0208298_1056692All Organisms → cellular organisms → Bacteria → Proteobacteria757Open in IMG/M
3300025085|Ga0208792_1091971Not Available533Open in IMG/M
3300025098|Ga0208434_1101931All Organisms → cellular organisms → Bacteria → Proteobacteria560Open in IMG/M
3300025103|Ga0208013_1055899Not Available1060Open in IMG/M
3300025108|Ga0208793_1081694Not Available931Open in IMG/M
3300025110|Ga0208158_1062785Not Available902Open in IMG/M
3300025110|Ga0208158_1070858Not Available838Open in IMG/M
3300025114|Ga0208433_1103225Not Available705Open in IMG/M
3300025118|Ga0208790_1127093Not Available721Open in IMG/M
3300025128|Ga0208919_1220103All Organisms → cellular organisms → Bacteria → Proteobacteria562Open in IMG/M
3300025131|Ga0209128_1098783All Organisms → cellular organisms → Bacteria → Proteobacteria945Open in IMG/M
3300025132|Ga0209232_1035760All Organisms → Viruses → Predicted Viral1882Open in IMG/M
3300025133|Ga0208299_1035924All Organisms → cellular organisms → Bacteria2010Open in IMG/M
3300025133|Ga0208299_1058049Not Available1441Open in IMG/M
3300025141|Ga0209756_1129104All Organisms → cellular organisms → Bacteria → Proteobacteria1045Open in IMG/M
3300025251|Ga0208182_1004833All Organisms → cellular organisms → Bacteria → Proteobacteria4533Open in IMG/M
3300025251|Ga0208182_1007315All Organisms → cellular organisms → Bacteria3386Open in IMG/M
3300025264|Ga0208029_1040536Not Available1025Open in IMG/M
3300025274|Ga0208183_1030986Not Available1150Open in IMG/M
3300025274|Ga0208183_1066411All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.696Open in IMG/M
3300025277|Ga0208180_1108346Not Available607Open in IMG/M
3300025301|Ga0208450_1139863Not Available503Open in IMG/M
(restricted) 3300027881|Ga0255055_10128272Not Available1394Open in IMG/M
3300027906|Ga0209404_10618325Not Available726Open in IMG/M
3300029448|Ga0183755_1020479All Organisms → cellular organisms → Bacteria → Proteobacteria2202Open in IMG/M
3300031774|Ga0315331_10351817All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300032360|Ga0315334_11637950Not Available549Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine72.38%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean18.10%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater3.81%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.90%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface1.90%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.95%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006754Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006921Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaGEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300008220Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908EnvironmentalOpen in IMG/M
3300009412Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s2EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009603Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904EnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009620Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010150Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025110Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025118Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025133Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025264Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)EnvironmentalOpen in IMG/M
3300025274Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51 (SPAdes)EnvironmentalOpen in IMG/M
3300025277Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16 (SPAdes)EnvironmentalOpen in IMG/M
3300025301Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)EnvironmentalOpen in IMG/M
3300027881 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24514J20073_100802633300001731MarineMSDIENTLYKRMDKVDELLRRDLSPEARRIWIKHARALKEIRWEQANERIEALARLGGAFLEQ*
Ga0066836_1093181023300006166MarineMMKTEEETLYARIEKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFIEF*
Ga0098033_109366643300006736MarineMTELEENTLYARIEKVDRLLQQDLSQGARRIWIRHARALREIRWQKANERIEALARVGGCCME*
Ga0098035_122052933300006738MarineMVEMEMEEQTLYTRIEKVEKLLRQDLSQSARYIWTNKLRDLKELRWQKANERIETLARFGGAYME*
Ga0098035_123417023300006738MarineMMEEEQTLYARIDKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARYGGAFLEY*
Ga0098058_113475523300006750MarineMEEEQTLYARIDKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARYGGAFLEY*
Ga0098058_119156223300006750MarineMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWATKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098040_103806723300006751MarineMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWTTKLRDLKELRWQKANERIEALARFGGAVLEQ*
Ga0098040_104132863300006751MarineMIDRTEEETLYKRIGKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIQA
Ga0098048_119108013300006752MarineMIDRTEEETLYKRIGKVEKLLRQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAF
Ga0098039_101515163300006753MarineMTDTEEQTLYTRIDKVEKLLKQDMSQGARRIWINKLRALKEIRWQKANERIEALARAGGAFLEY*
Ga0098039_108835423300006753MarineMTDTEEQTLYARIDKVEKLLRQDLSQSARYIWATKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098039_113838043300006753MarineNMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWTTKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098039_123516823300006753MarineMIDRTEEETLYRRIDKVEKLLRQDLSQGARRIWAGKLRALQELRWHKANERIEALARFGGAFLEY*
Ga0098044_120145713300006754MarineMIDRTEEETLYRRIDKVEKLLRQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY*
Ga0098044_121764123300006754MarineMMKTEEETLYARIEKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARFGGAFIEF*
Ga0098044_125840513300006754MarineRIDKIDGLLRSDLSQEARYIWTKHARALKEIRWQKANERIQSLARFGGAYLE*
Ga0098044_139348523300006754MarineMTELEENTLYARIEKVDRLLQQDLSQGARRIWIRHARALREIRWQKANERIEALARFGGAFLEQ*
Ga0098054_102372833300006789MarineMMKTEEETLYARIDKVEKLLKQDLSQGARRIWAGKLRALQELRWHKANERIEALARYGGAFLEY*
Ga0098054_102383423300006789MarineMIDRTEEETLYKRIEKVEKLLKQDLSQGARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF*
Ga0098054_102834873300006789MarineMVEMEMEEQTLYTRIEKVEKLLRQDLSQGARRIWTNKLRDLKELRWQKANERIEALARFGGAFLEQE*
Ga0098054_106871033300006789MarineMMEEEQTLYVRIDKVEKLLRQDLSQGARRIWTGKLRALQELRWHKANERIEALARFGGAFLEY*
Ga0098054_130050923300006789MarineMTDTDEQTLYTRIDKVEKLLRQDLSQSARYIWATKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098054_133783713300006789MarineINYSSTMIDRTEEETLYKRIGKVEKLLRQDLSQGARRIWANKLRDLQELRWHKANERIQALARFGGSYLEH*
Ga0098055_106429913300006793MarineMIDRTEEETLYRRIDKVEKLLRQDLSQGARRIWANKLRDLQELRWHKANERIEALARYGGAFLEY*
Ga0098055_112872413300006793MarineMIDRTEEETLYRRIDKVEKLLRQDLSQGARRIWAGKLRALQELRWHKANERIEALARFGGAFIEF*
Ga0098055_131112533300006793MarineMKTEEETLYARIEKVEKLLKQDLSQGARRIWTGKLRALRELRWHKANERIEALARFGGAFIEF*
Ga0098055_140803933300006793MarineMIDRTEEETLYKRIDKVEKLLKQDLSQGARRIWAGKLSALQELRWHKANERIEALARFGGAF
Ga0066372_1057086723300006902MarineMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWTTKLRDLKELRWQKANERIQSLARFGGAYLE*
Ga0098060_111279223300006921MarineMEEEQTLYVRIDKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARYGGAFLEY*
Ga0098060_120558813300006921MarineMIDRTEEETLYRRIDKVGKLLRQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY*
Ga0098045_107512623300006922MarineMIDRTEEETLYKRIGKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY*
Ga0098053_110559333300006923MarineEMEEQTLYTRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIEALARYGGAFLEQE*
Ga0098051_110098323300006924MarineMIDRTEEETLYKRIDKVEKLLKQDLSQGARRIWAGKLSALQELRWHKANERIEALARYGGAFLEY*
Ga0098051_113004623300006924MarineMIDRTEEETLYRRIDKVEKLLRQDLSQGARRIWAGKLRALQELRWHKANERIEALARVGGAFLEYE*
Ga0098051_113245623300006924MarineMIDRTEEETLYKRIGKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIQALARFGGSYLEH*
Ga0098051_114113023300006924MarineMVEMEMEEQTLYTRIEKVEKLLRQDLSQGARRIWTNKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098050_105445233300006925MarineMMKTEEETLYARIEKVEKLLKQDLSQGARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF*
Ga0098050_110026033300006925MarineMIDRTEEETLYRRIDKVEKLLRQELSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY*
Ga0098057_105393213300006926MarineDTEEQTLYTRIDKVEKLLRQDISQSARYIWATKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098034_112045713300006927MarineMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWTNKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098041_127167423300006928MarineMEEEQTLYARIDKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARYGG
Ga0098036_104363043300006929MarineMIDRTEEETLYKRIDKVENLLRQDLSQGARRIWTDKLRALQELRWQKANERIEALARFGGAFIEF*
Ga0110931_108423533300007963MarineMIDRTEEDTLYARIDKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF*
Ga0098052_103040533300008050MarineMVEMEMEEQTLYTRIEKVENFLLQDLSQDARRIWINKLRDLKELRWQKANERIEALARYGGAFLEQE*
Ga0098052_128466933300008050MarineMTETEEQTLYTRIDKVEKLLRQDLSQSARYIWTNKLRDLKELRWQKANERIEALARFGGAYME*
Ga0098052_129195633300008050MarineMTNEEQTLYTRMEKVDKLLRSDLSQEARYIWTKHARALKEIRWQKANERIQSLARMGGCY
Ga0098052_140782213300008050MarineMIDRTEEETLYKRIEKVEKLLKQDLSQGARRIWTNKLRDLQELRWHKANERIEALARFGGAF
Ga0114898_101086913300008216Deep OceanMTNEEQTLYTRMEKVDKLLRSDLSQEARYIWTKHARALKEIRWQKANERIQSLARMGGCYLE*
Ga0114898_102133223300008216Deep OceanMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWATKLRDLKELRWQKANERIEALTRFGGAYMK*
Ga0114898_109835023300008216Deep OceanMVEMEREEQTLYTRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIQSLARFGGAYME*
Ga0114898_114815923300008216Deep OceanMIDRTEEDTLYKRIDKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF*
Ga0114899_1001339193300008217Deep OceanMVKMEMEEQTLYTRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIQSLARFGGAYME*
Ga0114910_103015563300008220Deep OceanMTNEEQTLYTRMDKVDKLLRSDLSQEARYIWTKHARALKEIRWQKANERIQSLARMGGCYLE*
Ga0114903_101452923300009412Deep OceanMTNEEQTLYTRMEKVDKLLRSDLSQEARYIWTKHARALKEIRWQKANERIQSLARFGGAYLE*
Ga0114903_112554213300009412Deep OceanMIDRTEEDTLYKRIDKVEKLLKQELSQGARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF*
Ga0114932_10001636223300009481Deep SubsurfaceMIDRTDEETLYKRIEKVEKLLRQDLSQGARRIWTGKLRDLQELRWQKANERIEALARFGGAFIEF*
Ga0115011_1075994523300009593MarineMMEEEQTLYRRIDKVENLLKQDLSQGARRIWAGKLRALQELRWHKANERIEALARYGGAFLEY*
Ga0115011_1117689013300009593MarineMIDRTEEETLYRRIDKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY*
Ga0114911_106487543300009603Deep OceanMIDRTEEDTLYKRIDKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGGAFI
Ga0114911_108355313300009603Deep OceanIDKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF*
Ga0114901_107234733300009604Deep OceanMIDRTEEDTLYKRIDKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGG
Ga0114912_102307453300009620Deep OceanGGNMVKMEMEEQTLYTRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIQSLARFGGAYME*
Ga0115012_1090224733300009790MarineMIDRTEEETLYKRIDKVEKLLKQDLSQGARRIWAGKLSALQELRWHKANERIEALARFGGAFLEY*
Ga0115012_1204158913300009790MarineMMEEEQTLYVRIDKVEKLLRQDLSQGARRIWTGKLRALQELRWHKANERIEALARYGGAFLEY*
Ga0098049_108511853300010149MarineMKTEEETLYARIEKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALA
Ga0098056_102286753300010150MarineYARIDKVEKLLKQDLSQGARRIWAGKLRALQELRWHKANERIEALARYGGAFLEY*
Ga0098056_110342743300010150MarineRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIEALARYGGAFLEQE*
Ga0098056_110636713300010150MarineQINYSSTMIDRTEEETLYKRIDKVEKLLKQDLSQGARRIWAGKLSALQELRWHKANERIEALARYGGAFLEY*
Ga0098056_129714313300010150MarineMKTEEETLYARIEKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARFGGAFIEF*
Ga0181432_101572043300017775SeawaterMTDTEEQTLYARIDKVEKLLRQDLSQSARYIWTNKLRDLKELRWQKANERIEALARFGGAYMG
Ga0181432_104324223300017775SeawaterMTDTEERTLYARMDKVDKLLRSDLSQEARYIWTKHARALKELRWQKANERIQSLARFGGAYLE
Ga0181432_111413313300017775SeawaterMTDTEEQTLYARMDKVDEMLQRDLSQSARYIWTKHARALKEIRWQKANERIEALARFGGAFMEF
Ga0181432_112764233300017775SeawaterMTDTEERTLYARMDKVDELLRSDLSQSARYIWAKHARSLKEIRWQKANERIEALARFGGAYME
Ga0209992_10000356593300024344Deep SubsurfaceMIDRTDEETLYKRIEKVEKLLRQDLSQGARRIWTGKLRDLQELRWQKANERIEALARFGGAFIEF
Ga0207901_100836633300025045MarineMSDIENTLYKRMDKVDELLRRDLSPEARRIWIKHARALKEIRWEQANERIEALARLGGAFLEQ
Ga0208012_100395913300025066MarineMMEEEQTLYVRIDKVEKLLRQDLSQGARRIWTGKLRALQELRWHKANERIEALARFGGAFLEY
Ga0208920_109300023300025072MarineMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWATKLRDLKELRWQKANERIEALARFGGAYME
Ga0208298_105669223300025084MarineMMKTEEETLYARIEKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARFGGAFIEF
Ga0208792_109197113300025085MarineMIDRTEEETLYRRIDKVEKLLRQELSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY
Ga0208434_110193113300025098MarineMIDRTEEETLYRRIDKVEKLLRQDLSQGARRIWAGKLRALQELRWHKANERIEALARFGGAFLEY
Ga0208013_105589933300025103MarineMVEMEMEEQTLYTRIEKVEKLLRQDLSQSARYIWTNKLRDLKELRWQKANERIETLARFGGAYME
Ga0208793_108169413300025108MarineMEEEQTLYARIDKVEKLLKQDLSQGARRIWTGKLRALQELRWHKANERIEALARYGGAFLEY
Ga0208158_106278523300025110MarineMIDRTEEETLYKRIGKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIQALARFGGSYLEH
Ga0208158_107085813300025110MarineMIDRTEEETLYKRIEKVEKLLKQDLSQGARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF
Ga0208433_110322523300025114MarineMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWTNKLRDLKELRWQKANERIETLARFGGAYME
Ga0208790_112709323300025118MarineMVEMEMEEQTLYTRIEKVEKLLRQDLSQGARRIWTNKLRDLKELRWQKANERIEALARFGGAFLEQE
Ga0208919_122010323300025128MarineMIDRTEEETLYKRIDKVENLLRQDLSQGARRIWTDKLRALQELRWQKANERIEALARFGGAFIEF
Ga0209128_109878323300025131MarineMIDRTEEETLYRRIDKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFLEY
Ga0209232_103576043300025132MarineMIDRTEEETLYRRIDKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFIEF
Ga0208299_103592423300025133MarineMVEMEMEEQTLYTRIEKVENFLLQDLSQDARRIWINKLRDLKELRWQKANERIEALARYGGAFLEQE
Ga0208299_105804923300025133MarineMVEMEMEEQTLYTRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIEALARFGGAFLEQE
Ga0209756_112910433300025141MarineMMKTEEETLYARIEKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIEALARFGGAFIEF
Ga0208182_100483333300025251Deep OceanMIDRTEEDTLYKRIDKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF
Ga0208182_100731533300025251Deep OceanMVKMEMEEQTLYTRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIQSLARFGGAYME
Ga0208029_104053633300025264Deep OceanMIDRTEEDTLYARIDKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF
Ga0208183_103098613300025274Deep OceanMTDTEEQTLYTRIDKVEKLLRQDLSQSARYIWATKLRDLKELRWQKANERIEALARFG
Ga0208183_106641133300025274Deep OceanGNMVKMEMEEQTLYTRIEKVEKFLRQDLSQDARRIWINKLRDLKELRWQKANERIQSLARFGGAYME
Ga0208180_110834623300025277Deep OceanMTNEEQTLYTRMEKVDKLLRSDLSQEARYIWTKHARALKEIRWQKANERIQSLARFGGAYLE
Ga0208450_113986333300025301Deep OceanQTLYTRMEKVDKLLRSDLSQEARYIWTKHARALKEIRWQKANERIQSLARMGGCYLE
(restricted) Ga0255055_1012827223300027881SeawaterMKTEEETLYSRIDKVEKLLKQDLSQGARRIWVGKLRDLQELRWHKANERIEALARFGGAFIEF
Ga0209404_1061832523300027906MarineMMEEEQTLYRRIDKVENLLKQDLSQGARRIWAGKLRALQELRWHKANERIEALARYGGAFLEY
Ga0183755_102047923300029448MarineMMKTEEETLYTRINKVEKLLKQDLSQDARRIWTNKLRDLQELRWHKANERIEALARFGGAFIEF
Ga0315331_1035181713300031774SeawaterMMKTEEETLYARIEKVEKLLKQDLSQGARRIWANKLRDLQELRWHKANERIEALARYGGAFLEY
Ga0315334_1163795033300032360SeawaterMTDTEERTLYARMDKVDELLRSDLSQSARYIWAKHARSLKEIRWQKANERIEALARFGGAYMG


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