NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F096012

Metagenome / Metatranscriptome Family F096012

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F096012
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 71 residues
Representative Sequence MPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVVRRRE
Number of Associated Samples 83
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 28.57 %
% of genes near scaffold ends (potentially truncated) 39.05 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (60.952 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(14.286 % of family members)
Environment Ontology (ENVO) Unclassified
(48.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.58%    β-sheet: 16.84%    Coil/Unstructured: 51.58%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.4.5.0: automated matchesd5ffxa_5ffx0.78644
a.4.5.0: automated matchesd6pcoa_6pco0.78532
a.4.5.0: automated matchesd4lmya_4lmy0.7785
a.4.5.0: automated matchesd2xiga_2xig0.77481
a.4.5.0: automated matchesd5nbca_5nbc0.77348

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00072Response_reg 20.95
PF09844DUF2071 6.67
PF04392ABC_sub_bind 4.76
PF03328HpcH_HpaI 3.81
PF11604CusF_Ec 1.90
PF16268DUF4921 0.95
PF01381HTH_3 0.95
PF05532CsbD 0.95
PF07045DUF1330 0.95
PF01145Band_7 0.95
PF13462Thioredoxin_4 0.95
PF03083MtN3_slv 0.95
PF08402TOBE_2 0.95
PF03450CO_deh_flav_C 0.95
PF05598DUF772 0.95
PF00528BPD_transp_1 0.95
PF00892EamA 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 4.76
COG0469Pyruvate kinaseCarbohydrate transport and metabolism [G] 3.81
COG2301Citrate lyase beta subunitCarbohydrate transport and metabolism [G] 3.81
COG38362-keto-3-deoxy-L-rhamnonate aldolase RhmACarbohydrate transport and metabolism [G] 3.81
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 0.95
COG4095Sugar transporter, SemiSWEET family, contains PQ motifCarbohydrate transport and metabolism [G] 0.95
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.95

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.90 %
UnclassifiedrootN/A38.10 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664022|INPgaii200_c1030874Not Available502Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_10694172All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium665Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101096943Not Available522Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101313238All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300000955|JGI1027J12803_108308680Not Available849Open in IMG/M
3300004156|Ga0062589_100521435Not Available1008Open in IMG/M
3300004157|Ga0062590_102350084All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300004463|Ga0063356_105521888Not Available543Open in IMG/M
3300004479|Ga0062595_101166233All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium680Open in IMG/M
3300004480|Ga0062592_102606373Not Available510Open in IMG/M
3300004643|Ga0062591_101726837Not Available636Open in IMG/M
3300005093|Ga0062594_101414960All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium707Open in IMG/M
3300005293|Ga0065715_10063893Not Available709Open in IMG/M
3300005332|Ga0066388_100312716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales2216Open in IMG/M
3300005347|Ga0070668_100404864All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300005353|Ga0070669_100984761Not Available723Open in IMG/M
3300005353|Ga0070669_101492158All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300005355|Ga0070671_101210953All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300005365|Ga0070688_100327365All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1115Open in IMG/M
3300005367|Ga0070667_102130939All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium528Open in IMG/M
3300005440|Ga0070705_100548918All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium886Open in IMG/M
3300005455|Ga0070663_101019327All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium720Open in IMG/M
3300005455|Ga0070663_101626725All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005457|Ga0070662_100214931All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1532Open in IMG/M
3300005457|Ga0070662_100704150All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300005530|Ga0070679_101038796All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium764Open in IMG/M
3300005539|Ga0068853_102234119Not Available530Open in IMG/M
3300005543|Ga0070672_100143061All Organisms → cellular organisms → Bacteria1974Open in IMG/M
3300005543|Ga0070672_100626011Not Available939Open in IMG/M
3300005617|Ga0068859_101929261All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300005617|Ga0068859_101943146Not Available650Open in IMG/M
3300005719|Ga0068861_100981704Not Available805Open in IMG/M
3300006049|Ga0075417_10285238All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300006049|Ga0075417_10343886Not Available730Open in IMG/M
3300006049|Ga0075417_10593273Not Available563Open in IMG/M
3300006169|Ga0082029_1673472Not Available518Open in IMG/M
3300006844|Ga0075428_100648437All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1126Open in IMG/M
3300006852|Ga0075433_10268674All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1511Open in IMG/M
3300006853|Ga0075420_100369691All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1240Open in IMG/M
3300006881|Ga0068865_101442456Not Available615Open in IMG/M
3300006904|Ga0075424_100668940All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300006918|Ga0079216_10469764All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium818Open in IMG/M
3300007076|Ga0075435_100106231All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2331Open in IMG/M
3300009098|Ga0105245_10861474All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300009100|Ga0075418_11670698Not Available692Open in IMG/M
3300009100|Ga0075418_12296261Not Available588Open in IMG/M
3300009100|Ga0075418_13076124Not Available508Open in IMG/M
3300009148|Ga0105243_10594048All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1065Open in IMG/M
3300009174|Ga0105241_10379589All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300009545|Ga0105237_12158565All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium566Open in IMG/M
3300010397|Ga0134124_10002677All Organisms → cellular organisms → Bacteria14339Open in IMG/M
3300010397|Ga0134124_12692986Not Available541Open in IMG/M
3300010399|Ga0134127_12806151Not Available567Open in IMG/M
3300012685|Ga0137397_10143697All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1766Open in IMG/M
3300012685|Ga0137397_10587357All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria829Open in IMG/M
3300012685|Ga0137397_11030213All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium604Open in IMG/M
3300012922|Ga0137394_10467556All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1072Open in IMG/M
3300012922|Ga0137394_10651958All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300012927|Ga0137416_10075354All Organisms → cellular organisms → Bacteria2462Open in IMG/M
3300013306|Ga0163162_10813406Not Available1051Open in IMG/M
3300013306|Ga0163162_10916081All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium989Open in IMG/M
3300013306|Ga0163162_12859743Not Available555Open in IMG/M
3300015371|Ga0132258_11070511All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2038Open in IMG/M
3300018027|Ga0184605_10039697Not Available1974Open in IMG/M
3300018075|Ga0184632_10492088Not Available504Open in IMG/M
3300021073|Ga0210378_10157723Not Available875Open in IMG/M
3300025318|Ga0209519_10744340Not Available523Open in IMG/M
3300025912|Ga0207707_10664994Not Available877Open in IMG/M
3300025917|Ga0207660_10052784All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2895Open in IMG/M
3300025923|Ga0207681_10591251Not Available916Open in IMG/M
3300025927|Ga0207687_11114817All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium678Open in IMG/M
3300025934|Ga0207686_10530666All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium917Open in IMG/M
3300025935|Ga0207709_10231191Not Available1339Open in IMG/M
3300025935|Ga0207709_10540856All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300025936|Ga0207670_10837647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria768Open in IMG/M
3300025940|Ga0207691_10096718All Organisms → cellular organisms → Bacteria2640Open in IMG/M
3300025961|Ga0207712_11075776Not Available715Open in IMG/M
3300025972|Ga0207668_10360677All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300026118|Ga0207675_102270973Not Available557Open in IMG/M
3300027886|Ga0209486_10188182All Organisms → Viruses → Predicted Viral1161Open in IMG/M
3300027909|Ga0209382_10000463All Organisms → cellular organisms → Bacteria67088Open in IMG/M
3300027909|Ga0209382_10001927All Organisms → cellular organisms → Bacteria31382Open in IMG/M
3300027909|Ga0209382_10093688All Organisms → cellular organisms → Bacteria3526Open in IMG/M
3300027909|Ga0209382_10617067All Organisms → cellular organisms → Bacteria1178Open in IMG/M
3300028536|Ga0137415_10115603All Organisms → cellular organisms → Bacteria2530Open in IMG/M
3300030006|Ga0299907_10227876All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1534Open in IMG/M
3300030606|Ga0299906_10015239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6157Open in IMG/M
3300031092|Ga0308204_10273258Not Available556Open in IMG/M
3300031548|Ga0307408_100088876All Organisms → cellular organisms → Bacteria2328Open in IMG/M
3300031548|Ga0307408_100420356Not Available1152Open in IMG/M
3300031548|Ga0307408_100786504All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium862Open in IMG/M
3300031820|Ga0307473_10064760All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1804Open in IMG/M
3300031847|Ga0310907_10183515Not Available987Open in IMG/M
3300032003|Ga0310897_10384983All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium660Open in IMG/M
3300032005|Ga0307411_11110291All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium713Open in IMG/M
3300032012|Ga0310902_10020681All Organisms → cellular organisms → Bacteria2880Open in IMG/M
3300032013|Ga0310906_10213218All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1180Open in IMG/M
3300032179|Ga0310889_10657847Not Available544Open in IMG/M
3300032211|Ga0310896_10734141All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium561Open in IMG/M
3300033407|Ga0214472_10766372Not Available871Open in IMG/M
3300033417|Ga0214471_10017972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5599Open in IMG/M
3300033550|Ga0247829_11416760Not Available574Open in IMG/M
3300033551|Ga0247830_10135660All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1781Open in IMG/M
3300034667|Ga0314792_249224Not Available518Open in IMG/M
3300034817|Ga0373948_0169911All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium554Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere14.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil8.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.86%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.86%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.86%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.90%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.90%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.95%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030606Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033407Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034667Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPgaii200_103087422228664022SoilMPVEIEAFLXAYKPKXICLXCLXQVTAREXADVKTVVDALLATRRAESQDHG
ICChiseqgaiiFebDRAFT_1069417223300000363SoilMPVEIEAFLSAYAPKLICLECLAAVTSRTEADVRSTVQMLLAERRAETQVGECLNCNATEFVVRHRARA*
INPhiseqgaiiFebDRAFT_10109694313300000364SoilVLTTQAADAHSRSTMPVELEAFLTAYKPKFICLGCLSRVTEREAEHVKIAMDALLITRRAECQVAECLNCNAVSFVVRRR*
INPhiseqgaiiFebDRAFT_10131323813300000364SoilMPVQIEAFLDAYTPKFICICCLAAVTSRDEADVRGTVQMLLAERRAETRVGECMNCNGEAFV
JGI1027J12803_10830868013300000955SoilMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVVRRRER
Ga0062589_10052143523300004156SoilVLTLGGLTSSTSAGKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT*
Ga0062590_10235008423300004157SoilIEIESFLNAYRPKFICLPCLSAVTSRDQEDVRGAVNALLAERRAETDVAECLNCNAMAFVVRRLVR*
Ga0063356_10552188823300004463Arabidopsis Thaliana RhizosphereMSREIDAFLAAYKPKYICLVCLGEVTARDPADVKQAVDSLIAERRAETQVAECLNCNATA
Ga0062595_10116623313300004479SoilVIEIESFLNAYAPKFICIPCLATVTARSEADVRSVVMTLLAERRAGTQEGECLNCNARAFVVRRR*
Ga0062592_10260637313300004480SoilQIEAFLNAYAPKFICIHCLAAVTSREEDDVRGTVQMLLAERRAETRVAECLNCNTTAFVVRHRVR*
Ga0062591_10172683723300004643SoilVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT*
Ga0062594_10141496013300005093SoilFLNAYRPKFICLPCLSAVTSRDQEDVRVAVNALLAERRAETDVAECLNCNAMAFVVRRLVR*
Ga0065715_1006389323300005293Miscanthus RhizosphereVLTLGGLTSSISAXKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT*
Ga0066388_10031271643300005332Tropical Forest SoilMIEIQAFLSRYAPKFICVTCLAAVTSRQEGEVRNVVNALLAERRAESQVAECFNCNATAFVVRQRVTRQ*
Ga0070668_10040486423300005347Switchgrass RhizosphereMPVEIEAFLEAYKPKYICLACLSQVTAREAADVKTTVETLLATRRAESRVAECLNCNAMAFVVRRREPRPPPPRP*
Ga0070669_10098476113300005353Switchgrass RhizosphereLTTPAPPRILVPTMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR*
Ga0070669_10149215823300005353Switchgrass RhizosphereMPVEIQAFLEAYKPKYICLACLSQVTAREAADVKTTVETLLATRRAESRVAECLNCNAMAFVVRRREPRPPPPRP*
Ga0070671_10121095313300005355Switchgrass RhizosphereMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAM
Ga0070688_10032736533300005365Switchgrass RhizosphereNAYRPKFICLPCLSAVTSRDQEDVRGAVNALLAERRAETDVAECLNCNAMAFVVRRLVR*
Ga0070667_10213093913300005367Switchgrass RhizosphereMPIEIEAFLEAYKPKYICLACLSQVTAREAADVKTTVETLLATRRAESRVAECLNCNAMAFVVRRRERRPPPPRP*
Ga0070705_10054891833300005440Corn, Switchgrass And Miscanthus RhizosphereAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT*
Ga0070663_10101932713300005455Corn RhizosphereAVIQIDAFLAAYRPKFICLACLGAVTGRDEADVRATVNALLAERRAETEAAECLNCNAKAFVVRRRVQ*
Ga0070663_10162672523300005455Corn RhizosphereSAVAAAAVDDASAGAHARPPMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVVRRRERRPPPPRP*
Ga0070662_10021493133300005457Corn RhizosphereMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCN
Ga0070662_10070415033300005457Corn RhizosphereMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVVRRRE
Ga0070679_10103879633300005530Corn RhizosphereTATHDVLTLGGLTSSISARKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT*
Ga0068853_10223411913300005539Corn RhizosphereMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESGVAECLNCNAMAFVVRRRERRPPPPRP*
Ga0070672_10014306143300005543Miscanthus RhizosphereMPIEIEAFLEAYKPKYICLACLSQVTAREAADVKTTVETLLATRRAESRVAECLNCNAMAFVVRRREPRPPPPRP*
Ga0070672_10062601133300005543Miscanthus RhizosphereILVPTMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR*
Ga0068859_10192926123300005617Switchgrass RhizosphereMVEIESFLAAYWPKFICLPCLAKVTSRDEGDVRNVVMTLMAERRVETQAAECLNCNVSAFVVRRRRDGGVGLGA*
Ga0068859_10194314613300005617Switchgrass RhizosphereDRPTRPPAVHGDGFRARSRALTTPAPPRILVPTMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR*
Ga0068861_10098170423300005719Switchgrass RhizosphereMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR*
Ga0075417_1028523823300006049Populus RhizosphereMPVQIDAFLSAYSPKFICIYCLASVTSRQEADVRATVHMLLAERRAETRVGECLNCNVKAFVVRHRAG*
Ga0075417_1034388633300006049Populus RhizosphereMVEIESFLNAYWPKLICLPCLAKVTSRAEGDVRNVVMTLMTERRVETQAAECLNCNVTAFVVRRRRDG*
Ga0075417_1059327313300006049Populus RhizosphereMSVQIDAFLSAHSPRFICINCLAAVTSREEADVRATVQMLFAERRAETRVEKCPNCSVTAFVVRHRGQ*
Ga0082029_167347213300006169Termite NestMPVQIEAFLDAYRPKFICISCLATVTGREEADVRTTVQALLAERRAETQVAECMNCSVSAFVVRRRVRSTF*
Ga0075428_10064843713300006844Populus RhizosphereASRKWVDDPLPMRALSWLPMAQEIDAFLAAYKPKYICLPCLCDVTAREPADVKQAVDALILGGRAETQVSECLNCNATAFVVRRR*
Ga0075433_1026867443300006852Populus RhizosphereMVEIESFLNAYWPKFICLPCLAKVTSRAEGDVRNVVMTLMTERRVETQAAECLNCNVTAFVVRRRRDG*
Ga0075420_10036969133300006853Populus RhizosphereDDPLPMRALSWLPMAQEIDAFLAAYKPKYICLPCLCDVTAREPADVKQAVDALILGGRAETQVSECLNCNATAFVVRRR*
Ga0068865_10144245623300006881Miscanthus RhizosphereRPPAVHGDGFRARSRALTTPAPPRILVPTMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR*
Ga0075424_10066894023300006904Populus RhizosphereMVEIESFLTAYWPKFICLPCLAKVTSRDEGDVRNVVMTLMAERRVETQAAECLNCNVTAFVVRRRRDGGLGLGA*
Ga0079216_1046976423300006918Agricultural SoilMPYEIEAFLTAYNGKLICQPCLAAVTGRDETDVRSTVQMLIAERRAEPQVGECMNCNVTAFTVRRRVR*
Ga0075435_10010623123300007076Populus RhizosphereMVEIESFLTAYWPKFICLPCLAKVTSRAEGDVRNVVMTLMTERRVETQAAECLNCNVTAFVVRRRRDG*
Ga0105245_1086147423300009098Miscanthus RhizosphereMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVVRRRERRPPPPRP*
Ga0075418_1167069813300009100Populus RhizosphereMAQEIDAFLAAYKPKYICLPCLCDVTAREPADVKQAVDALILGGRAETQVSECLNCNATAFVVRRR*
Ga0075418_1229626123300009100Populus RhizosphereMPVQIDAFLSAYSPKFICINCLASVTSRQEADVRATVHMLLAERRAETRVGECLNCNVKAFVVRHRAG*
Ga0075418_1307612413300009100Populus RhizosphereAPTAHRAPSTTTEPNRVMPVEIEAFLSAYAPKLICLECLAAVTSRTEADVRSTVQMLLAERRAETQVGECLNCNATEFVVRHRARA*
Ga0105243_1059404813300009148Miscanthus RhizosphereVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAET
Ga0105241_1037958923300009174Corn RhizosphereMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVV
Ga0105237_1215856513300009545Corn RhizosphereAYRPKFICLACLGAVTGRDEADVRATVNALLAERRAETEVAECLNCNAKAFVVRRRVQ*
Ga0134124_10002677153300010397Terrestrial SoilLTSSISAGKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT*
Ga0134124_1269298623300010397Terrestrial SoilVRDVIEIESFLNAYRPKFICLPCLSAVTSRDQEDVRVAVNALLAERRAETDVAECLNCNAMAFVVRRLVR*
Ga0134127_1280615113300010399Terrestrial SoilVFAVIQIDAFLAAYGPKFICLACLGAVTGRDEADVRATVNALLAERRAETEVAECLNCNAKAFVVRRRVQ
Ga0137397_1014369723300012685Vadose Zone SoilMIEIESCLTAYSPKFICVPCLATVTSRTESDVRTVVTRLLAERRAETQVGECLNCNAIAFVVRRR*
Ga0137397_1058735713300012685Vadose Zone SoilMIEIESFLTAYSPKFICVPCLATVTSRTESDVRKVATRLLAERRAETQVGDCLNCNAIAFVLRRR*
Ga0137397_1103021323300012685Vadose Zone SoilMIEIESFLTAYSPKFMCVPCLATVTSRTESDVRTVVTRLLAERRAETQVGECLNCNAIAFVVRRR*
Ga0137394_1046755623300012922Vadose Zone SoilMIEIESFLAAYAPKVICVPCLATVTSRTESDVRSVITRLLAERRAETQAGECLNCNAMAFVVRRR*
Ga0137394_1065195823300012922Vadose Zone SoilLPVEIEAFLHAYKPKFICLPCLSQVTAREPADVKTVVDALLATRRAESQVAECLNCNARAFVVRRREQRP
Ga0137416_1007535443300012927Vadose Zone SoilMIEIESFLTAYSPKFICVPCLATVTSRTESDVRTVVTRLLAERRAETQVGECLNCNAIAFVVRRR*
Ga0163162_1081340633300013306Switchgrass RhizosphereMPVEIEGFLAAYRPKYICLACLSQVTARRSADVKTVVVALLATRRAEARIAECLNCNAMAFVVRRC*
Ga0163162_1091608133300013306Switchgrass RhizosphereVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNC
Ga0163162_1285974313300013306Switchgrass RhizosphereMPGEIDAFLAAYKPKFICLSCLSLVTGRAAEDVRIAVDALLVTRRAESQVAECLNCNATAFVVRRL*
Ga0132258_1107051143300015371Arabidopsis RhizosphereMPVELEAFLAAYKPKFICLGCLSRVTEREAEHVKIAVAALLITRRAECQVAECLNCNAVSFVVRRR*
Ga0184605_1003969723300018027Groundwater SedimentVATEIDAFLVAYKPKFICLACLSRVTAREPSDVKGAVDELLITRRAESQVAECLNCNTTAFVVRRR
Ga0184632_1049208823300018075Groundwater SedimentMAAEIEAFLVAYKPKFICLACLGLVTAREPADVKAVVDALLGTRRAESHVAECLNCNA
Ga0210378_1015772313300021073Groundwater SedimentQIEAFLVAYKPKFICLACLGLVTAREPADVKAVVDALLGTRRAESHVAECLNCNATAFVVRRR
Ga0209519_1074434013300025318SoilLGFLMAVELDAFLAAYKPKFICLSCLGEVTAREPADVKRAVDTLLAERRAETQVAECLNC
Ga0207707_1066499423300025912Corn RhizosphereVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT
Ga0207660_1005278453300025917Corn RhizosphereVLTLGGLTSSISAGKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT
Ga0207681_1059125123300025923Switchgrass RhizosphereMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR
Ga0207687_1111481723300025927Miscanthus RhizosphereMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVVRRRERRPPPPRP
Ga0207686_1053066643300025934Miscanthus RhizosphereAHARPPMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMAFVVRRRERRPPPPRP
Ga0207709_1023119113300025935Miscanthus RhizosphereMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKSAVDALLITLRAESQVAECLNCNAMAFVVRRR
Ga0207709_1054085613300025935Miscanthus RhizosphereMPVEIEAFLGAYKPKFICLPCLCQVTAREPADVKTVVDALLATRRAESRVAECLNCNAMA
Ga0207670_1083764723300025936Switchgrass RhizosphereMPSDSSGAGLQDSWTPTATHDVLTLGGLTSSISARKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT
Ga0207691_1009671813300025940Miscanthus RhizosphereAVLYMPPAEVRAQRLEYPRILVPTMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR
Ga0207712_1107577613300025961Switchgrass RhizosphereLTTPAPPRILVPTMPVELEAFLVAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR
Ga0207668_1036067713300025972Switchgrass RhizosphereMPVEIEAFLEAYKPKYICLACLSQVTAREAADVKTTVETLLATRRAESRVAECLNCNAMAFVVRRRERRPPPPRP
Ga0207675_10227097323300026118Switchgrass RhizosphereLEAFLMAYKPKFICLACLGRVTGREAEDVKIAVDALLITLRAESQVAECLNCNAMAFVVRRR
Ga0209486_1018818223300027886Agricultural SoilMPYEIEAFLTAYNGKLICQPCLAAVTGRDETDVRSTVQMLIAERRAEPQVGECMNCNVTAFTVRRRVR
Ga0209382_10000463403300027909Populus RhizosphereMSVQIDAFLSAHSPRFICINCLAAVTSREEADVRATVQMLFAERRAETRVEKCPNCSVTAFVVRHRGQ
Ga0209382_10001927153300027909Populus RhizosphereMPVQIDAFLSAYSPKFICIYCLASVTSRQEADVRATVHMLLAERRAETRVGECLNCNVKAFVVRHRAG
Ga0209382_1009368853300027909Populus RhizosphereMAQEIDAFLAAYKPKYICLPCLCDVTAREPADVKQAVDALILGGRAETQVSECLNCNATAFVVRRR
Ga0209382_1061706723300027909Populus RhizosphereVIQIDAFLAAYRPKFICLVCLAVVTGRDEADVRATVNALLAERRAQTAVAECLNCNATAFVVRRCVQ
Ga0137415_1011560343300028536Vadose Zone SoilMIEIESFLTAYSPKFICVPCLATVTSRTESDVRTVVTRLLAERRAETQVGECLNCNAIAFVVRRR
Ga0299907_1022787643300030006SoilMPVQVDAFLSAYSPKFICINCLASVTSRQEADVRATVHMLVAERRAETRVGECLNCNVKAFVVRHRAG
Ga0299906_1001523973300030606SoilMAVELDAFLAAYKPKFICLSCLGEVTAREPADVKRAVDTLLAERRAETQVAECLNCNVTAFVVRRR
Ga0308204_1027325813300031092SoilMPIEIEAFLSAYTPKLICINCLAAVTSREEADVRSTVQMLLAERRAETQVGECLNCNATAFVVRHRVR
Ga0307408_10008887613300031548RhizosphereMPVEIDAFLAAYQPKFICIACLGAVTARDEADVRRTVEMLLAERRVETQVAECLNCNQTAFVVRQRVR
Ga0307408_10042035623300031548RhizosphereMPVEIEAFLAAHRPKFICIACLGAMTARAEPDVRSTVQMLLAERRVETQVAECLNCNETAFVVRHRVR
Ga0307408_10078650423300031548RhizosphereMPYEIEAFLSAYKGKFICLPCLGAVTGRDEADVRSTVQMLLAERRAETQAGECLNCNAT
Ga0307473_1006476033300031820Hardwood Forest SoilMVEIESFLTAYWPKFICLPCLAKVTGRVEDDVRNVVMTLMAERRVETQAAECLNCNVTAFVVRRRRDGGLGLGA
Ga0310907_1018351523300031847SoilVLTLGGLTSSISAGKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNVKAFVVRRRAT
Ga0310897_1038498323300032003SoilVLTLGGLTSSISARKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT
Ga0307411_1111029113300032005RhizosphereMPVEIDAFLAAYQPKFICIACLGAVTARDEADVRRTVEMLLAERRVETQVAECLN
Ga0310902_1002068163300032012SoilLTSSISAGKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT
Ga0310906_1021321823300032013SoilLTSSISAGKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNVKAFVVRRRAT
Ga0310889_1065784733300032179SoilWTPTATHDVLTLGGLTSSISARKVGAVIEIEAFLNAYRPRFICLPCLAAVTSREDADVRVTVDALLAERRAETAVAECLNCNAKAFVVRRRAT
Ga0310896_1073414113300032211SoilRRKVFAVIQIDAFLAAYGPKFICLACLGAVTGRDEADVRATVNALLAERRAETEVAECLNCNAKAFVARRRVQ
Ga0214472_1076637223300033407SoilDALAQGAISGLLMAVELDAFLAAYKPKFICLSCLGEVTAREPADVQQAVDALLAERRAETQVAECLNCNATAFVVRRR
Ga0214471_1001797233300033417SoilMAVELDAFLAAYKPKFICLSCLGEVTAREPADVQQAVDALLAERRAETQVAECLNCNATAFVVRRR
Ga0247829_1141676013300033550SoilMSREIDAFLAAYKPKYICLVCLGEVTARDPADVKQAVDSLIAERRAETQVAECLNCNATAFVVRRR
Ga0247830_1013566023300033551SoilVAPMSREIDAFLAAYKPKYICLVCLGEVTARDPADVKQAVDSLIAERRAETQVAECLNCNATAFVVRRR
Ga0314792_249224_75_2873300034667SoilVFAVIQIDAFLAAYGPKFICLACLGAVTGRDEADVRATVNALLAERRAETEVAECLNCNAKAFVARRRVQ
Ga0373948_0169911_363_5543300034817Rhizosphere SoilDAFLAAYRPKFICLACLGAVTGRDEADVRATVNALLAERRAETEAAECLNCNAKAFVVRRRVQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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