Metagenome / Metatranscriptome Family F096011

Basic Information
Family ID	F096011
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	68 residues
Representative Sequence	MAATSQQLYYVDQNAYAGDTTDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC
Number of Associated Samples	50
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (49.524 % of family members)
Environment Ontology (ENVO)	Unclassified (50.476 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.810 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.14% β-sheet: 22.45% Coil/Unstructured: 70.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04240	Caroten_synth	15.24
PF01040	UbiA	2.86
PF01850	PIN	0.95
PF07690	MFS_1	0.95
PF06941	NT5C	0.95
PF05199	GMC_oxred_C	0.95
PF13560	HTH_31	0.95
PF13751	DDE_Tnp_1_6	0.95
PF13450	NAD_binding_8	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2324	Uncharacterized membrane protein	Function unknown [S]	15.24
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.95
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	0.95

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.57%
Host-Associated	Host-Associated	11.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.90%
Plants	Host-Associated → Plants	11.43%
Aquatic	Environmental → Aquatic	6.67%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.62%
Freshwater	Environmental → Aquatic → Freshwater	6.67%
Phylloplane	Host-Associated → Plants → Phylloplane	2.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.62%
Ice	Environmental → Aquatic → Freshwater → Ice	6.67%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	2.86%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.86%
Loam	Environmental → Terrestrial → Soil → Loam	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	73.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.62%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	49.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.67%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.86%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.90%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.95%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.95%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034135	Biocrust microbial communities from Mojave Desert, California, United States - 25HNC	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_102625771	3300000858	Soil	EAKDAAAMAQLRMAATSQKLHFVDQNAYAGNATDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITPDMGRPVSGAC*
C688J35102_1186163831	3300002568	Soil	NAFAANATDLEYYGFRQGGQQVTVVAADASTYCMQAPGGTEIFKMTQDTGRPVSGTC*
JGI25406J46586_102339471	3300003203	Tabebuia Heterophylla Rhizosphere	DQYAASTIDLEAYGFRQGEQQVTVKAAGAGTYCMQAPGGSGTFKITADAGTPDAGSCPVS
Ga0058697_105018572	3300005562	Agave	NYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQNAYAGNATDLQAYGFRQGEQVVTVAAADASTYCMQAPGGGGTFRITQDTGRPVLGAC*
Ga0082029_17070201	3300006169	Termite Nest	GFRQGGQWVTVVAAGAATYCMQAPGGTDTFKMTHDTARPLPGTC*
Ga0079217_103981342	3300006876	Agricultural Soil	TDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITPDMGRPVSGAC*
Ga0079216_101422083	3300006918	Agricultural Soil	LEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0111538_126701441	3300009156	Populus Rhizosphere	YGFRQGGQLVTVVAADASTYCMEAPGGTYTFKMTQDTGRPVSGTC*
Ga0126307_106743001	3300009789	Serpentine Soil	AANVTDLEAYGFRQGGQQVRVVAADASTYCMQAPGGTDIFKMTQDTGRPVSGTC*
Ga0126307_109417842	3300009789	Serpentine Soil	AKDSAAMAQLRSAATSQDLYHAKLNTFAANTTDLEAYGFRQGGQQVTVVAADASTYCMQAPGGTDTFKMTQHTGTPVSGSC*
Ga0126307_109576971	3300009789	Serpentine Soil	PNYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQNAYAGDTTDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126307_113374641	3300009789	Serpentine Soil	KDAAAMAQLRMAATSQQLYYVNQNTYAGNVTDLQPYGFRQGAQMVTVRAADASTYCMQAPGGGDTFRITQDTGRPVAGAC*
Ga0126307_115557541	3300009789	Serpentine Soil	AIPNYIGQQDKAKDAAAMAQLRMAATSQQLYYVDRHAYAGDTTDLEAYGFRQGAQPVTVGAADGSTYCMQALGGAGTFRITQDTGRPVAGAC*
Ga0126313_100008371	3300009840	Serpentine Soil	GFRQGEQEVTVMAADTSSYCMEAAGGGGATFRITQDTGRPLAGGC*
Ga0126313_100369285	3300009840	Serpentine Soil	YHAKLNAFAANTTDLKAYGFRQGGQQVTVVAADASTYCMQSPGATDTFKMTQDMGRPVPGPC*
Ga0126313_103704402	3300009840	Serpentine Soil	VDQNAYAGDTTDLEAYGFRQGEQMVTVRAADASTYCMQVPGGGGTFRITQDTGRPVSGAC
Ga0126313_107671451	3300009840	Serpentine Soil	MAATSQQLYYVDQNAYATNATDLEAYGFRQGEQVVTVGAADASSYCMQAPGGGDTFRITQDTGRPLSGAC*
Ga0126313_108347302	3300009840	Serpentine Soil	DLEAYGFRQGEQQVTVEAASAGTYCMKAPGGSGTFKITADAGRPESGSC*
Ga0126313_108929761	3300009840	Serpentine Soil	IAIPNYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQNAYAGNATDLEVYGFRQGEQFVTVGMADASTYCMQAPGGGGTFRITQDTGRPVSGVC*
Ga0126313_109331041	3300009840	Serpentine Soil	IPNYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQNAYAGNATDLEAYGFRQGEQVVTVGAADASTYCMKAPGGGGTFRITQDTGRPVSGAC*
Ga0126305_101319013	3300010036	Serpentine Soil	DTTDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126305_101638661	3300010036	Serpentine Soil	AARSEDRLVAQQAVVAATKAQLRTTATSQQLYYAKQDEYAANATDLEAYGFRQGEQQVTVEAASAGTYCMKAPGGSGTFKITADAGRPESGSC*
Ga0126305_107407311	3300010036	Serpentine Soil	YGFRQGEQEVTVGAADATTYCMEAPGGGGTFMITQDTGRPVSGTC*
Ga0126305_110875211	3300010036	Serpentine Soil	AYGFRQGDQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPEAGAC*
Ga0126304_100297355	3300010037	Serpentine Soil	IGQQDKAKDAAAMAQLRMAATSQQLYYVDQNVYAGNSTDLEAYGFRQGEQVVTVGAADASNYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126304_101932233	3300010037	Serpentine Soil	YIGQQDKAKDAAAMAQLRMAATSQQLYYVDHNAYAGNATDLEAYGFKQGEQVVTVGAADASTYCMQAPGGGGTFMITQDTGRPLSGAC*
Ga0126304_102021352	3300010037	Serpentine Soil	MAATSQQLYYVDQNAYAGNATDLEAYGFRQGEQVVTVGAADASTYCMKAPGGGGTFRITQDTGRPVSGAC*
Ga0126304_110440242	3300010037	Serpentine Soil	QNAYAGTVADLEAYGFRQGEQVVAVGAADASTYCMEAPGGEGTFKITEETGRPVPGEC*
Ga0126315_100685691	3300010038	Serpentine Soil	AMAQLRMAATSQQLYYVDQNAYAGNATDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFMITQDTGRPVSGAC*
Ga0126315_105260291	3300010038	Serpentine Soil	MAATSQQLYYVDQNAYAGNATDLEAYGFRQGEQVVTVGTADASTYCMQAPGGGGTFMITQDTGRPVSGAC*
Ga0126315_112050931	3300010038	Serpentine Soil	QLRSAATSQDLYHAKLNAFAANTTDLKAYGFRQGGQQVTVVAADASTYCMQAPGGTDTFKMTQDTGRPVSGTC*
Ga0126309_100490074	3300010039	Serpentine Soil	FRQGGQRVTVVAADAGTYCMQAPGGTDTFKMTQNTGRPVSGTC*
Ga0126309_105177991	3300010039	Serpentine Soil	LYYVEQNAYAGTATELEAYGFRQGEQEVTVMAADTSSYCMEAPGGGGATFRITQDTGGPEAGGC*
Ga0126309_105549641	3300010039	Serpentine Soil	ATELEAYGFRQGEQEVTVMAADASSYCMEAPGGGGATFRITQDTGRPEAGGC*
Ga0126309_108053072	3300010039	Serpentine Soil	ATELEAYGFRQGEQEVTVMAADASSYCMEAPGGGGATFRITQDAGRVEAGGC*
Ga0126309_108176701	3300010039	Serpentine Soil	MAQLRMAATSQQLYYVDQNAYAGNATDLQAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126309_108499501	3300010039	Serpentine Soil	LRSAATSQELYYARQDAFAATVTALEASGFRQGGQLVTVVAAGASTYCMQAQGGNGTFKMTQDTGRPVPGVC*
Ga0126309_110236121	3300010039	Serpentine Soil	QDKAKDAAAMAQLRTAATSQQLHYVDQNAYAGTATDLEAYGFRQGEQEVTVGAADATTYCMEAPGGGGTFRITQDTGRPEAGTC*
Ga0126308_100546054	3300010040	Serpentine Soil	AIPNYIGQQDKAKDAAAMAQLRMAATSQQLFYVDQNAYASNATDLEAYGFRQGEQVVTVGAADATTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126308_108441642	3300010040	Serpentine Soil	AIPNYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQNAYASDTTDLEAYGFRQREQVVTVGASDASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126312_100134167	3300010041	Serpentine Soil	DQNAYAGTATDLEAYGFRQGEQEVTVGAADATTYCMEAPGGGGTFRITQDTGRPEAGTC*
Ga0126312_100537251	3300010041	Serpentine Soil	LRTAATSQQLYFVEQNAYAGTATELEAYGFRQGEQEVTVVAADTGSYCMEAAGGGGATVRITQDTRPVAGGC*
Ga0126312_106336012	3300010041	Serpentine Soil	AAMAQLRMAATSQQLYYVDQNAYATNATDLEAYGFRQGEQVVTVGAADASSYCMQAPGGGDTFRITQDTGRPLSGAC*
Ga0126312_111103861	3300010041	Serpentine Soil	QQDKAIDAAAMAQLRTAATSQQLYYVEHNAYAGTATELEAYGFRQGEQEVTVMTADTSSYCMEAPGGGGATFRITQDTGRPVAGGC*
Ga0126312_111412541	3300010041	Serpentine Soil	AYAGDATDLEDYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126314_104718021	3300010042	Serpentine Soil	MYHAKQDIFTGNASDFEAYDFRQGGQLAKVVAAVASTYCMQAPGGTNTFKMTQDTGLPVFGTC*
Ga0126314_106096921	3300010042	Serpentine Soil	DSAAMAQLRAAATSQDLYHAKQNAFADSAIDLEAYGFRQGGQPVAVVDSDAGSYCMQAAGGTATYKMTQDMGRPVAGTC*
Ga0126314_108827412	3300010042	Serpentine Soil	NAYAGNATDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFMITQDTGRPVSGAC*
Ga0126314_110365371	3300010042	Serpentine Soil	AALAIPNYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQHAYASDTTDLEAYGFRQGAQPVTVGAADGSTFCMQAPGGAGTFRITQDTGRPVAGGC*
Ga0126314_113984461	3300010042	Serpentine Soil	DLYHAKQNAFADDTNDLEAYGFRQGGQQVRVVAADASTYCMQAPGGTDIFKMTQDTGRPVSGTC*
Ga0126310_103023512	3300010044	Serpentine Soil	MAATSQQLYYVDQNAYAGNATDLEAYGFRQGEQVVTVGAADANTYCMEAPGGGGRFRITQDTGGPVSGAC*
Ga0126310_104296591	3300010044	Serpentine Soil	MAATSQQLYYVDQNAYAGNATDLEAYGFRQGEQVVTVGAADASTYCMKAPGGGGTFRITQDTGRPVSG
Ga0126310_113285761	3300010044	Serpentine Soil	DLEAYGFRQGEQVVTVGAADASTYCMKAPGGGGTFRITQDTGRPVSGAC*
Ga0126311_103384141	3300010045	Serpentine Soil	LRMAATSQQLYYVDQNVYAGNATDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126311_107326661	3300010045	Serpentine Soil	ANTTDLKAYGFRQGGQQVTVVAADASTYCMQSTGATDTFKMTQDMGRPVPGTC*
Ga0126306_107042022	3300010166	Serpentine Soil	MAATSQQLYYVDQNAYAGDTTDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC*
Ga0126306_110055701	3300010166	Serpentine Soil	AAMAQLRMAATSQQLYYVDRHAYAGDTTDLEAYGFRQGAQPVTVGAADGNTYCMQAPGGAGTFRITQDTGRPVAGAC*
Ga0126306_111392122	3300010166	Serpentine Soil	TVVAADASTYCMQAPGGTDTFKMTQHTGTPVSGSC*
Ga0126306_116400441	3300010166	Serpentine Soil	DAAAKAQLRTAATSQQLYFAEQDAYATNATDLDAYGFRQGEQQVTVKAASASTYCMQAPGGSGTFKITEDTGIPESGSC*
Ga0126306_117024641	3300010166	Serpentine Soil	VDQNAYAGDTTDLEAYGFRQGEQMVAVRVADASTYCMQAPGGGGTFRITQDTGRPVSGAC
Ga0136623_100392901	3300012045	Polar Desert Sand	IPNYIGQQDKAKDAAAMAQLRTAATSQQLYYVDQNAYAGTTTELEAYGFRQGAQEVTVVAADASTYCMEAPGGGGTFRITQDTGRPESGTC*
Ga0136610_11052011	3300012184	Polar Desert Sand	DAAAMAQLRTAATSQQLYYVDQNAYAGTATELEAYGFRQGEQEVTVGAADASTYCMEAPGGGGTFKITQDTGRPESGTC*
Ga0136618_102747141	3300012188	Polar Desert Sand	LYYVDQNAYAGTATELEAYGFRQGEQEVTVGAADASTYCMEAPGGGGTFKITQDTGRPESGTC*
Ga0136613_100300835	3300012681	Polar Desert Sand	TTELEAYGFRQGAQEVTVVAADASTYCMEAPGGGGTFRITQDTGRPESGTC*
Ga0136613_106732741	3300012681	Polar Desert Sand	TTELEAYGFRQGAQEVTVVAADASTYCMEAPGGGGITFRITQDTGRPESGTC*
Ga0162650_1000402141	3300012939	Soil	MAATSQQLYYVDQNAYAGNATDLEAYGFRQGAQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPEAGTC*
Ga0182000_101186111	3300014487	Soil	NYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQNAYAGDATDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGSTFRITQDTGRPEAGIC*
Ga0182000_102382511	3300014487	Soil	LRMAATSQQLYYVDQNAYAGNATDLEAYGFRQGEQFVTIGMADASTYCMQAPGGGGTFRITQDTGRPVSGVC*
Ga0136617_111088772	3300017789	Polar Desert Sand	DQNAYAGTTTELEAYGFRQGAQEVTVVAADASTYCMEAPGGGGTFRITQDTGRPESGTC
Ga0190275_100643485	3300018432	Soil	MAQLRMAATSQQLYYVDQHAYASDTTDLEAYGFRQGAQPVTVGAADVSTYCMQAPGGTGMFRITQDTGRPVAGAC
Ga0190275_103098171	3300018432	Soil	MAQLRTAATSQDLYHAKQNAFAANATDLEAYGFRQGGQQVTVVAADTSTYCMQAPGGTDTFRMTQDTGKPVSGTC
Ga0190275_125066521	3300018432	Soil	VTVVAAGASTYCMQAPGGTDTFKMTEQTGRPVSGTC
Ga0190275_130014972	3300018432	Soil	FRQGGQQVTVVAADTSTYCMQSPGGTNTFRITQETGRPVSGTC
Ga0190275_131122911	3300018432	Soil	YIGQQDKARDAAAMAQLSTAATSQQLYHVDQNAYAGTATELEAYGFRQGEQEVTVGAADASTYCMEAPGGGGTFKITQDMGRPESGMC
Ga0190275_134619581	3300018432	Soil	IPNYLGQQEEARDSAAMAQLRAAATSQDLYHAKQNAFAANATDLEAYGFRQGGQQVTIVAADTSTYCMQAPGGTDTFRMTQDTGRPVSGTC
Ga0190268_110984561	3300018466	Soil	FAGDTTALEACCFRQGGQPVTVVVAGTSTYCMQAPGGTDTFKMTQDTGRPVSGPC
Ga0190268_113126941	3300018466	Soil	DLEDYGFRQGEQVVTVGAADASTYCMQAPGGGGTFMITQDTGRPVSGAC
Ga0190268_114378342	3300018466	Soil	YIGQQDKARDAAAMAQLRTAATSQQLYHVDQNAFAGTATELEAYGFRQGEQEVTVGAADASTYCMEAPGGGGTFKITQDMGRPESGMC
Ga0190270_113887772	3300018469	Soil	SQQLYYVDQNAYAGDATDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPEAGTC
Ga0190270_113982262	3300018469	Soil	SQQLHYVDQNSYAGDATDLEAYGFRQGEQTVTVLAGDVSSYCMQAPGGGGVTFKFTPDMGRPLPGAC
Ga0190270_122447002	3300018469	Soil	LRMAATSQQLYYVDRHAYAGDTTDLEAYGFRQGAQPVTVGAADGSTYCMQAPGGAGTFRITQDTGRPVAGAC
Ga0190264_100015923	3300019377	Soil	MAQLRMAATSQQLYYVDQNAYAGNVTDLEAYGFRQVEQVVTVGVADASTYCMEAPGGGGRFRITQDTGRPVSGAC
Ga0190264_100054645	3300019377	Soil	MAQLRSAATSQQLYYARQDAFADTVAELEAFGFRQGGQQVAVVAASDSTYCMQAPGGNGEFKITQDTGRPIPGEC
Ga0190267_106374572	3300019767	Soil	SQDLYHAKQDAFAGNATALEAYGFRQGGQWVTVVAADAGTYCMQAPGGTNIFKMTQDTGRPVSGTC
Ga0190267_112071691	3300019767	Soil	NYIGQQDKAKDAAAMAQLRMAATSQQLYYVDQNAYAGAATDLEDYGFRQGEQVVTIGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC
Ga0208612_10342885	3300027638	Polar Desert	ATELEAYGFRQGEQEVTVGAADASTYCMEAPGGGGTFKITQDTGRPESGTC
Ga0307276_101094162	3300028705	Soil	TIPNYIGQQKEAKDSAAMAQLRTAATSQELYHAKQDAFAGNATDLEAYGFRQGRQLVKVVAAVAITYCMQAPGGTNTFKMTQDTGLPVSGTC
Ga0307315_102893172	3300028721	Soil	GNATDLEGYGFRQGGQWVTVVAADASTYCMQAPGGTSTFKMTQDTGRPVSGTC
Ga0307297_100295973	3300028754	Soil	RQGGQLVTVVAAGASTYCMQAQGGNGTFKMTHDTGRPVPGTC
Ga0268243_10001661	3300030510	Soil	SQQLYYVDQNAYAGDATDLGDYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC
Ga0308201_103383382	3300031091	Soil	DLEAYGFRQGGQLVTVVTADTSTYCMQASGGTDTFKMTHDTGRPVSGTC
Ga0308204_103421041	3300031092	Soil	VDQNAYAGNATDLEAYGFRQGAQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPEAGTC
Ga0307413_109919342	3300031824	Rhizosphere	NYIGQQDKARDAAAMAQLRMAATSQQLYYVNQNAYAGNVTDLQAYGFRQGAQMVTVRAADASTYCMQAPGGGDTFRITQDTGRPVAGAC
Ga0307413_114962132	3300031824	Rhizosphere	QQLYFAEQDAYATNATDLEAYGFRQGEQQVTVKAASASTYCMQAPGGSGTFKITEDTGMPESGSC
Ga0307410_105608482	3300031852	Rhizosphere	PTYVGQQDEAKDAAAEAQLRTAATSQQLYYARQDEYATNATDLEAYGFRQGEQVVTVATASGSTYCMQAPGGTGTFKITADAGRPESGTC
Ga0307406_118496702	3300031901	Rhizosphere	QQLYYVDQNAYAGDTTDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC
Ga0307407_114056141	3300031903	Rhizosphere	QNAYAGNATDLEAYGFRQGEQFVTVGMANASTYCMQAPGGGDTFRITQDTGRPVAGAC
Ga0307411_116718322	3300032005	Rhizosphere	QLRMAATSQQLYYVDQNAYASDTTDLEAYGFRQGEQVVTVGAADASTYCMQAPGGGGTFRITQDTGRPVSGAC
Ga0307415_1015656212	3300032126	Rhizosphere	QQLYYVDQNAYAGNATDLEAYGFRQGEQFVTVGMADSSTYCMQAPGGGGTFRITQDTGRPVSGVC
Ga0268251_100668331	3300032159	Agave	MAQLRMAATSQQLYYVDQNAYAANATDLQAYGFRQGEQVVMVVAADASTYCMQAPGGGGTFTITQDTGRPVTGAC
Ga0268251_105623842	3300032159	Agave	MAQLRMAATSQQLYYVDQNAYATNATDLQAYGFRQGEQVVTVAAADASSYCMQAPGGGGTFSSTQDTGRPVSGAC
Ga0334930_017283_776_1003	3300034005	Sub-Biocrust Soil	MAQLRTAATSQELYYARQDAFAATATALEAFGFRQGGQLVTVVAAGASTYCMQAQGGNGTFKMTQDTGRPVPGAC
Ga0334936_143783_301_501	3300034007	Biocrust	SQELYYARQDAFAATATALEAFGFRQGGQLVTVVAAGASTYCMQAQGGNGAFKMTQDTGRPVPGTC
Ga0334929_105984_3_137	3300034135	Hypolithic Biocrust	GFRQGGQLVTVVAAGASTYCMQAQGGNGAFKMTQDTGRPVPGTC
Ga0334937_062302_672_929	3300034221	Biocrust	VVVIIGILAAMAQLRTAATSQELYYARQDAFAATATALEAFGFRQGGQLVTVVAAGASTYCMQAQGGNGTFKMTQDTGRPVPGAC

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F096011

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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