NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095955

Metagenome / Metatranscriptome Family F095955

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095955
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 53 residues
Representative Sequence ASLAQRTLSTPVRQARREAGTTAGTEPLERALRLLTWATVALAVALVAARLR
Number of Associated Samples 94
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.30 %
% of genes near scaffold ends (potentially truncated) 71.43 %
% of genes from short scaffolds (< 2000 bps) 65.71 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (95.238 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.381 % of family members)
Environment Ontology (ENVO) Unclassified
(39.048 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.762 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.00%    β-sheet: 0.00%    Coil/Unstructured: 45.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.66
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13742tRNA_anti_2 5.71
PF00027cNMP_binding 0.95
PF13692Glyco_trans_1_4 0.95
PF00534Glycos_transf_1 0.95
PF02595Gly_kinase 0.95
PF08245Mur_ligase_M 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1929Glycerate kinaseCarbohydrate transport and metabolism [G] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A95.24 %
All OrganismsrootAll Organisms4.76 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459016|G1P06HT01CNV8BNot Available716Open in IMG/M
3300001538|A10PFW1_10080561Not Available1024Open in IMG/M
3300001686|C688J18823_10622956Not Available688Open in IMG/M
3300002568|C688J35102_120343520Not Available1002Open in IMG/M
3300004081|Ga0063454_100980587Not Available677Open in IMG/M
3300004081|Ga0063454_101082177Not Available653Open in IMG/M
3300004153|Ga0063455_100435567Not Available789Open in IMG/M
3300005187|Ga0066675_11222249Not Available557Open in IMG/M
3300005337|Ga0070682_101073102Not Available673Open in IMG/M
3300005354|Ga0070675_101860595Not Available555Open in IMG/M
3300005435|Ga0070714_102008334Not Available564Open in IMG/M
3300005436|Ga0070713_101861307Not Available584Open in IMG/M
3300005455|Ga0070663_100233403Not Available1449Open in IMG/M
3300005455|Ga0070663_100234717Not Available1445Open in IMG/M
3300005529|Ga0070741_10245528Not Available1709Open in IMG/M
3300005529|Ga0070741_11164788Not Available652Open in IMG/M
3300005530|Ga0070679_100588534Not Available1056Open in IMG/M
3300005533|Ga0070734_10023882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3976Open in IMG/M
3300005539|Ga0068853_101770221Not Available599Open in IMG/M
3300005539|Ga0068853_101954997Not Available569Open in IMG/M
3300005563|Ga0068855_102185641Not Available556Open in IMG/M
3300005587|Ga0066654_10483690Not Available678Open in IMG/M
3300006173|Ga0070716_100368014Not Available1023Open in IMG/M
3300006175|Ga0070712_100379227Not Available1164Open in IMG/M
3300006175|Ga0070712_101755772Not Available543Open in IMG/M
3300006358|Ga0068871_100962781Not Available793Open in IMG/M
3300006806|Ga0079220_10812706Not Available709Open in IMG/M
3300009137|Ga0066709_104407251Not Available514Open in IMG/M
3300010045|Ga0126311_10305885Not Available1198Open in IMG/M
3300010375|Ga0105239_10450602Not Available1460Open in IMG/M
3300012200|Ga0137382_10686483Not Available733Open in IMG/M
3300012685|Ga0137397_10093081Not Available2203Open in IMG/M
3300012915|Ga0157302_10315609Not Available613Open in IMG/M
3300012944|Ga0137410_10332554Not Available1210Open in IMG/M
3300012960|Ga0164301_10029965Not Available2578Open in IMG/M
3300012961|Ga0164302_10969036Not Available660Open in IMG/M
3300012987|Ga0164307_10541476Not Available887Open in IMG/M
3300012987|Ga0164307_11212611Not Available626Open in IMG/M
3300012989|Ga0164305_10013401All Organisms → cellular organisms → Bacteria4048Open in IMG/M
3300013296|Ga0157374_10220834Not Available1859Open in IMG/M
3300013768|Ga0120155_1076063Not Available958Open in IMG/M
3300013770|Ga0120123_1055942Not Available853Open in IMG/M
3300014827|Ga0120171_1046115Not Available1367Open in IMG/M
3300015241|Ga0137418_10135721Not Available2180Open in IMG/M
3300018060|Ga0187765_10889244Not Available602Open in IMG/M
3300020070|Ga0206356_10445210Not Available749Open in IMG/M
3300020081|Ga0206354_10294013Not Available907Open in IMG/M
3300020081|Ga0206354_11430016Not Available534Open in IMG/M
3300024347|Ga0179591_1125443Not Available1681Open in IMG/M
3300025909|Ga0207705_10438700Not Available1012Open in IMG/M
3300025915|Ga0207693_10982718All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Limnohabitans → unclassified Limnohabitans → Limnohabitans sp. JirII-31645Open in IMG/M
3300025919|Ga0207657_11163907Not Available587Open in IMG/M
3300025921|Ga0207652_10649777Not Available943Open in IMG/M
3300025924|Ga0207694_11257840Not Available626Open in IMG/M
3300025926|Ga0207659_11606847Not Available555Open in IMG/M
3300025931|Ga0207644_10291568Not Available1312Open in IMG/M
3300026067|Ga0207678_10058710Not Available3310Open in IMG/M
3300026088|Ga0207641_10643234All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300026552|Ga0209577_10205297Not Available1511Open in IMG/M
3300028784|Ga0307282_10228639Not Available892Open in IMG/M
3300028792|Ga0307504_10060483Not Available1110Open in IMG/M
3300028878|Ga0307278_10409098Not Available596Open in IMG/M
3300028885|Ga0307304_10159479Not Available945Open in IMG/M
3300031781|Ga0318547_10326040Not Available935Open in IMG/M
3300031782|Ga0318552_10004276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5474Open in IMG/M
3300031793|Ga0318548_10650766Not Available512Open in IMG/M
3300031912|Ga0306921_10945863Not Available975Open in IMG/M
3300031939|Ga0308174_11078992Not Available683Open in IMG/M
3300031959|Ga0318530_10294770Not Available670Open in IMG/M
3300031996|Ga0308176_11331997Not Available763Open in IMG/M
3300032044|Ga0318558_10110333Not Available1296Open in IMG/M
3300032068|Ga0318553_10021125Not Available3031Open in IMG/M
3300032074|Ga0308173_12117315Not Available531Open in IMG/M
3300032074|Ga0308173_12280717Not Available511Open in IMG/M
3300032782|Ga0335082_11315137Not Available592Open in IMG/M
3300032805|Ga0335078_11773819Not Available673Open in IMG/M
3300034268|Ga0372943_1090348Not Available533Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.67%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.71%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.76%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.76%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.81%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.95%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.95%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.95%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.95%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.95%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.95%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.95%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459016Litter degradation ZMR2EngineeredOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
2ZMR_009744502170459016Switchgrass, Maize And Mischanthus LitterFALAASLAQRALSTPVREARRREGTTAGTEPLERALRLLTWGMVALAVGLVAARLR
A10PFW1_1008056113300001538PermafrostAFTASLAQRALSTPVRRARRTDETTAGIEPLERALRLLTWASLAVAVALVAARLR*
C688J18823_1062295613300001686SoilASLAQRTLSTPVRRARRHDATTAGIEPLEHALRLLTWGIVALAVALVAARLR*
C688J35102_12034352013300002568SoilGYFVEAQTLRVEAVAIAAYAFGLSLVQRALSTPVRRARREDGTTEGVETLERALKLLTWASVALAVALVAARLR*
Ga0063454_10098058723300004081SoilFVEAQTVRIEAVVAAAYGAILILAQRTLSTPVRNARRTLGTTEGTEPMERALRLMSWAAIALGVALVAARLR*
Ga0063454_10108217723300004081SoilALYAFALSLAQRALSTPVRRARRESGTTAGTEPLERALRLLTVAAVALSVALVAARLR*
Ga0063455_10043556713300004153SoilVEAVAIAAYAFGLSLVQRALSTPVRRARREDGTTEGVETLERALKLLTWASVALAVALVAARLR*
Ga0066675_1122224913300005187SoilTLSTPVRRARRAESTTTGIEPLERALRLLVWAMVALAVAAVAARLP*
Ga0070658_1064721323300005327Corn RhizosphereLSTPVRRARRESATTTGTEPLERALRWLTLAAVAIAVALVAARLR*
Ga0070683_10002279813300005329Corn RhizosphereSTPVRRARRESATTTGTEPLERALRWLTLAAVAIAVALVAARLR*
Ga0070682_10107310213300005337Corn RhizosphereCATSLAQRQLSTPVRQARRQEGTTAGTEPLERALRLLTWAMVALAVALVAARLR*
Ga0070675_10186059513300005354Miscanthus RhizosphereVAFYAFALSLAQRALSTPVRRARRESATTTGTEPLERALRWLTLAAVAIAVALVAARLR*
Ga0070714_10200833423300005435Agricultural SoilAAAYAFALTLTQRTLSTPVRQARRQQGTTVGTEPLERALLLLTWASVALAVALVAARLR*
Ga0070713_10186130723300005436Corn, Switchgrass And Miscanthus RhizosphereEAVAAAVYATLLSLAQRTLSTPVRQSRRVHGTTEGVEQLERALRLLTWAAVVLAVALVAARLR*
Ga0070663_10023340313300005455Corn RhizosphereAASLAQRKLSTPVRQARRQEGTTAGTEPLERALRLLTWAMVALAVALVAARLR*
Ga0070663_10023471713300005455Corn RhizosphereLAQRALSTPVREARRREGTTAGTEPLERALRLLTWGMVALAVGLVAARLR*
Ga0070741_1024552843300005529Surface SoilTALSLAQRALSTPVRDARRSRGTTEGIETLERALRLLTLAATAVAVAAVTARLT*
Ga0070741_1116478823300005529Surface SoilLILAQRTLSTPVRRARRDLGTTAGVEQFERALRLLTWAAVALAVALVAARLR*
Ga0070679_10058853423300005530Corn RhizosphereFALSYAQRTLSTPVRRARRERATTDGIQPLERALRALVWASAALGAALVAARLR*
Ga0070734_1002388213300005533Surface SoilFAAASYACLLSLAQRTLSTPVRDARRRQGTTAGVEPLERALRLLTWAAVAIALGLVAARLR*
Ga0068853_10177022113300005539Corn RhizosphereASLAQRTLSTPVRQARREAGTTAGTEPLERALRLLTWATVALAVALVAARLR*
Ga0068853_10195499723300005539Corn RhizosphereAAFALAASLAQRALSTPAREARRREGTTAGTEPLERALRLLTWGMVALAVGLVAARLR*
Ga0068855_10218564113300005563Corn RhizosphereLILAQRTLSTPVREARRSRNTLEGTAAFERALRLMTIAIVLLAVGLVAGRLT*
Ga0068854_10073038613300005578Corn RhizosphereRRARREQRTTAGTEPLEHALRLLTWASVALAVGLVAARLR*
Ga0066654_1037809223300005587SoilRELGTTTGVEALERALRALTWASVALAVALVAARLR*
Ga0066654_1048369013300005587SoilAQRALSTPVRRARRELGTTDGVETLERALRLLTWASVALAVALVAARLR*
Ga0068858_10154476913300005842Switchgrass RhizosphereRLSTPVRRARRERGDTAGTEPLEAALRACTWAAVLLAAALVVARLT*
Ga0070716_10036801423300006173Corn, Switchgrass And Miscanthus RhizosphereEAVAIAAYAFGSSLAQRTLSTPVRRARREHGTTEGVETLERALRLLTWTSVALAVALVAARLR*
Ga0070712_10037922713300006175Corn, Switchgrass And Miscanthus RhizosphereALSLAQRALSTPVRAARRERSTTAGTEELERALRLLAGASTLIAVALVAARLR*
Ga0070712_10175577213300006175Corn, Switchgrass And Miscanthus RhizosphereAIAAYAAALSLAQRTLSTPVRRARRSQGTLEGTETIERTLRWLTCAATAIAVGVVAARLR
Ga0068871_10096278123300006358Miscanthus RhizosphereSLAQRTLSTPVRRARREHGTTEGVETLERALRLLTWTSVALAVALVAARLR*
Ga0079220_1081270623300006806Agricultural SoilAQTIRLEAVAVALFAFTTSVAQRTLSTPVRQARRRHATVEGIEALERSLQLLSLAFVLLAVALVAARLR*
Ga0066709_10204826423300009137Grasslands SoilSLVQRRLSTPVRRARRELGTLEGTRRRETALRALTAAAVLLAATLVAARLT*
Ga0066709_10440725113300009137Grasslands SoilRPLSTPVRHARRADETTTGIEPLERALQLLTWASVALAVALVAARLR*
Ga0126313_1066992223300009840Serpentine SoilGGTTAGTEPLEAALRALAWALPLLAAAIVTARLT*
Ga0126309_1059613023300010039Serpentine SoilARRAEATTAGTEPLEHALRALAWAMPLLAAAIVTARLT*
Ga0126311_1030588523300010045Serpentine SoilAAFAACVSVAQRRLSTPVREARRRGGTTAGTEPLEAALRALAWALPLLAAAIVTARLT*
Ga0105239_1045060233300010375Corn RhizosphereFAFAASLAQRALSTPVRQARRLEGTTAGTEPLERALRLLTWGMVALAVALVAARLR*
Ga0134126_1052611113300010396Terrestrial SoilTPVRQARRQAGTTAGTEPLERALRLLTWATVALAVALVAARLR*
Ga0137382_1068648313300012200Vadose Zone SoilRALSTPVRRARREDATTVGIEPLERTLRLLTWASVALAVALVAARLR*
Ga0137372_1093619623300012350Vadose Zone SoilSTPVRRARRELGSLEGTEQLERTLRAGAWAAVLIASALVTARLT*
Ga0137397_1009308143300012685Vadose Zone SoilGLSLAQRALSTPVRRARREHETTEGIEALERTLRVLTWSSVALAVALVAARLR*
Ga0157302_1031560913300012915SoilDAIAVAFYAFALSLAQRALSTPVRRARRESATTTGTEPLERALRWLTLAAVAIAVALVAARLR*
Ga0137396_1009748413300012918Vadose Zone SoilTPVRRARRERETTEGIEALERTLRLLTWSSVALAVALVAARLR*
Ga0137410_1033255413300012944Vadose Zone SoilLSLAQRALSTPVRLARREHETTAGVEPLERALRLLTWASVALAVALVAARLR*
Ga0164300_1094918313300012951SoilRARREHATVEGIGTLERALRLLTWATVALAVALVAARLR*
Ga0164303_1067510513300012957SoilRRARREHATVEGIGTLERALRLLTWATVALAVALVAARLR*
Ga0164301_1002996513300012960SoilLSTPVRRARREAGSTSGTEPLERALRLLTAAAVLVAAALVAARLR*
Ga0164302_1096903613300012961SoilQTLRVEAVAIAAYAFGSSLAQRTLSTPVRRTRREHGTTEGVETLERALRLLTWTSVALAVALVAARLR*
Ga0164307_1054147623300012987SoilAIVVAIYAFALSLAQRALSTHVRRARRETGTTTGTEPLERALRLLTLAAVALSVALVAARLR*
Ga0164307_1121261113300012987SoilRTLSTPVRRARREHGTTEGVETLERALRLLTWTSIALAVALVAARLR*
Ga0164306_1007866643300012988SoilRARRETGTTAGTEPLERALRLLTLAAVALSVALVAARLR*
Ga0164305_1001340173300012989SoilSITTVEAVAIAAYAFGSSLAQRTLSTPVRRARREHGTTEGVETLERALRLLTWTSVALAVALVAARLR*
Ga0157374_1022083413300013296Miscanthus RhizosphereAFACATSFAQRQLSTPVRQARRQEGTTAGTEPLERALRLLTWAMVALAVALVAARLR*
Ga0157372_1105992613300013307Corn RhizosphereLEGTTAGTEPLERALRLLTWGMVALAVALVAARLR*
Ga0120155_107606323300013768PermafrostPAQGTLLTPVRRARREQDTVEGTETFERTLRWLTCAAIVLAVAVVAARLR*
Ga0120123_105594213300013770PermafrostSLAQRALSTPGRHARRTDETTAGIEPLERALRLLTWASVALAVALVAARLR*
Ga0120171_104611513300014827PermafrostLAQRTLSTAVRRARRAEGTLAGTETIERTLRWLTWASVMLAVAVVAARLR*
Ga0137418_1013572133300015241Vadose Zone SoilLHSFVAGYAFALSLAQRALSTPVRRARREHETTAGVEPLERALRLLTWASVALAVALVAARLR*
Ga0182006_131812413300015261RhizosphereRREAGSTRGTAPLERALRLLTIAAVLVGVALVAARLR*
Ga0187765_1088924413300018060Tropical PeatlandRAQRALSTPARRARRELGTTAGIGATETALRSLTWASVALAVALVASRLR
Ga0206356_1044521023300020070Corn, Switchgrass And Miscanthus RhizosphereFALSLAQRVLSTPVRRARREQRTTAGTEPLEHALRLLTWASVALAVGLVAARLR
Ga0206354_1029401323300020081Corn, Switchgrass And Miscanthus RhizosphereAAAGYAFTLSYAQRTLSTPVRRARRERATTDGIQPLERALRALVWASAALGAALVAARLR
Ga0206354_1143001623300020081Corn, Switchgrass And Miscanthus RhizosphereAGYAFALSYAQRALSTPVRQARRERATTDGIQPLERALRALVWASAALAAALVAARLR
Ga0179591_112544333300024347Vadose Zone SoilATALSLAQRALSTPVRRARRTQGTVEGTETIERTLRALTCATTLLGVALVAARLR
Ga0207705_1043870023300025909Corn RhizosphereALSLAQRALSTPVRRARRESATTTGTEPLERALRWLTLAAVAIAVALVAARLR
Ga0207695_1141928513300025913Corn RhizosphereSTPAREARRREGTTAGTEPLERALRLLTWGMVALAVGLVAARLR
Ga0207693_1098271823300025915Corn, Switchgrass And Miscanthus RhizosphereQSIRFEAMAIAAYAAALSLAQRTLSTPVRRARRSQGTLEGTETIERTLRWLTCAATAIAVGVVAARLR
Ga0207657_1116390723300025919Corn RhizosphereAAAGYAFALSYAQRTLSTPVRRARRERATTDGIQPLERALRALVWASAALGAALVAARLR
Ga0207652_1064977713300025921Corn RhizosphereIAAAAYAFALTLTQRTLSTPVRHARRKQGTTEGTEPLERALRLLTWGSVVLAVALVAARL
Ga0207652_1087363623300025921Corn RhizosphereRQARRQEGTTAGTEPLERALRLLTWAMVALAVALVAARLR
Ga0207694_1125784013300025924Corn RhizosphereFALAASLAQRALSTPAREARRREGTTAGTEPLERALRLLTWGMVALAVGLVAARLR
Ga0207659_1160684723300025926Miscanthus RhizosphereVAFYAFALSLAQRALSTPVRRARRESATTTGTEPLERALRWLTLAAVAIAVALVAARLR
Ga0207687_1132145623300025927Miscanthus RhizospherePVRRARRESATTTGTEPLERALRWLTLAAVAIAVALVAARLR
Ga0207644_1029156823300025931Switchgrass RhizosphereAQTLRVEAVAIAAYAFGSSLAQRTLSTPVRRARREHGTTEGVETLERALRLLTWTSVALAVALVAARLR
Ga0207640_1111509013300025981Corn RhizospherePVRRARREQRTTAGTEPLEHALRLLTWASVALAVGLVAARLR
Ga0207639_1182301813300026041Corn RhizosphereVRHARRKQGTTEGTEPLERALRLLTWGSVVLAVALVAARLR
Ga0207678_1005871053300026067Corn RhizosphereLAQRALSTPVREARRREGTTAGTEPLERALRLLTWGMVALAVGLVAARLR
Ga0207641_1064323423300026088Switchgrass RhizosphereVEAQTLRLDAIAVAIYAFALSLAQRALSTPVRRARRETGTTAGTEPLERALRLLTLAAVALSVALVAARLR
Ga0209577_1020529723300026552SoilFTGYFVEAQTVRVEAVAVAAYAFGLSLAQRALSTPVRRARRERETTDGIEALERTLRLLTWASVALAVALVAARLR
Ga0268266_1064563713300028379Switchgrass RhizosphereARRQEGTTAGTEPLERALRLLTWAMVALAVALVAARLR
Ga0307282_1022863923300028784SoilSTPVRQARREHATIEGIAPLERSLRLLAWALVALGVAIVAARLR
Ga0307504_1006048323300028792SoilAVAIAAYAFALSLGQRALSTPAREARRRRQTTVGIATHERALRLLTLASVLLSVALVAVRLR
Ga0307278_1040909813300028878SoilTALSLAQRRLSTPVREARRVRGTTTGTESLERALRAGTWAAVLIAAALVVARLDR
Ga0307304_1015947913300028885SoilAIAAALYAFLLTLVQRTLSTPVREARRKHATTAGTEPLERALRLLTWGSVALAVALVAARLR
Ga0311366_1166491413300030943FenRRERSTTEGTQPLERALRLLSLASTLIAVALVAARLR
Ga0318547_1032604023300031781SoilTALSLAQRTLSTPVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0318552_1000427683300031782SoilYATALSLAQRTLSTPVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0318548_1065076623300031793SoilTLRVEAIGAAAYATALSLAQRTLSTPVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0306921_1094586323300031912SoilATALSLAQRTLSTPVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0308174_1107899223300031939SoilYAFLLSLAQRTLSTPVRRARREQSTTAGIEPLERALRLLTWAAVALAVGLVAARLR
Ga0318530_1029477023300031959SoilSDRPEATAAATALSLAQRTLSTPVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0307409_10194602613300031995RhizosphereRAERTTAGTEPLEHALRALTSAMALLAAAVVAARLT
Ga0308176_1133199713300031996SoilLAQRALSTPVRQARRQDATTAGTEPLERALRLLTWGMVALAVAVVAARLR
Ga0318558_1011033313300032044SoilVEAIGAAAYATALSLAQRTLSTPVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0318553_1002112513300032068SoilRTLSTPVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0308173_1211731523300032074SoilLLSAAQRTLSTPVRRARREQATTAGVEAPERALRLLGWAATALGCALVLARLT
Ga0308173_1228071713300032074SoilQTLRLEAVAVAAYAFLLSLAQRALSTPVRRARREQATTAGIEPLERALRLLTWAAVALAVGLVAARLR
Ga0335082_1131513723300032782SoilALYALLLSRAQRALSTPARRARRELGTTAGIGATETTLRCLTWASVALAVALVASRLR
Ga0335078_1177381923300032805SoilEAVAAAAYGAILIMAQRTLSTPVRHARRTVGTTAGTEPLERALRLMCWASVALGIAAVAARLR
Ga0335083_1120945013300032954SoilVRRSRRELGSTDGTAPLEHALRALTWAAVAVAAALVASRLR
Ga0335076_1109075913300032955SoilVRRARRERATTAGTKPLETALRAFTWAIVALAVALVAARLR
Ga0310914_1084196613300033289SoilVREARRARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0318519_1055530023300033290SoilARNTTTGTAPLERALRLLTVATVLLAVGLVAGRLT
Ga0372943_1090348_329_5323300034268SoilTLRLAAIAAAGYATALSLTQHALSTPVREARRKRSTTAGVEPLERALRLLCFASTLIAVALVAARLR


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