Basic Information | |
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Family ID | F095876 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 105 |
Average Sequence Length | 90 residues |
Representative Sequence | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVDSFAEKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNVHGE |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 70.48 % |
% of genes near scaffold ends (potentially truncated) | 37.14 % |
% of genes from short scaffolds (< 2000 bps) | 80.00 % |
Associated GOLD sequencing projects | 83 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.37 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (61.905 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.333 % of family members) |
Environment Ontology (ENVO) | Unclassified (47.619 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (67.619 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 65.25% β-sheet: 0.00% Coil/Unstructured: 34.75% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.37 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 105 Family Scaffolds |
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PF09361 | Phasin_2 | 21.90 |
PF00196 | GerE | 5.71 |
PF13545 | HTH_Crp_2 | 1.90 |
PF00027 | cNMP_binding | 1.90 |
PF02518 | HATPase_c | 1.90 |
PF07883 | Cupin_2 | 1.90 |
PF03401 | TctC | 0.95 |
PF00072 | Response_reg | 0.95 |
PF00106 | adh_short | 0.95 |
PF02624 | YcaO | 0.95 |
PF13921 | Myb_DNA-bind_6 | 0.95 |
PF02472 | ExbD | 0.95 |
PF03480 | DctP | 0.95 |
PF12728 | HTH_17 | 0.95 |
PF03992 | ABM | 0.95 |
PF13188 | PAS_8 | 0.95 |
PF13557 | Phenol_MetA_deg | 0.95 |
PF03313 | SDH_alpha | 0.95 |
PF13353 | Fer4_12 | 0.95 |
PF00325 | Crp | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
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COG0848 | Biopolymer transport protein ExbD | Intracellular trafficking, secretion, and vesicular transport [U] | 0.95 |
COG1760 | L-serine deaminase | Amino acid transport and metabolism [E] | 0.95 |
COG1944 | Ribosomal protein S12 methylthiotransferase accessory factor YcaO | Translation, ribosomal structure and biogenesis [J] | 0.95 |
COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 0.95 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 61.90 % |
Unclassified | root | N/A | 38.10 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300002244|JGI24742J22300_10026576 | Not Available | 1001 | Open in IMG/M |
3300003861|Ga0031654_10047590 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 1208 | Open in IMG/M |
3300005093|Ga0062594_100117558 | Not Available | 1644 | Open in IMG/M |
3300005093|Ga0062594_100865631 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 847 | Open in IMG/M |
3300005293|Ga0065715_10970055 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 554 | Open in IMG/M |
3300005328|Ga0070676_10086241 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47 | 1915 | Open in IMG/M |
3300005330|Ga0070690_100044974 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47 | 2804 | Open in IMG/M |
3300005330|Ga0070690_100806751 | Not Available | 728 | Open in IMG/M |
3300005331|Ga0070670_100849364 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 826 | Open in IMG/M |
3300005333|Ga0070677_10074146 | Not Available | 1439 | Open in IMG/M |
3300005334|Ga0068869_100244117 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium valentinum | 1432 | Open in IMG/M |
3300005347|Ga0070668_100206704 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1613 | Open in IMG/M |
3300005353|Ga0070669_100391098 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1136 | Open in IMG/M |
3300005355|Ga0070671_101023590 | Not Available | 724 | Open in IMG/M |
3300005356|Ga0070674_100014816 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 4852 | Open in IMG/M |
3300005356|Ga0070674_100769507 | Not Available | 829 | Open in IMG/M |
3300005436|Ga0070713_100143296 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2118 | Open in IMG/M |
3300005438|Ga0070701_10153224 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1329 | Open in IMG/M |
3300005439|Ga0070711_100020386 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 4272 | Open in IMG/M |
3300005441|Ga0070700_100100363 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1906 | Open in IMG/M |
3300005456|Ga0070678_100508337 | Not Available | 1064 | Open in IMG/M |
3300005543|Ga0070672_100016024 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 5356 | Open in IMG/M |
3300005546|Ga0070696_101176111 | Not Available | 647 | Open in IMG/M |
3300005617|Ga0068859_100468904 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1355 | Open in IMG/M |
3300005718|Ga0068866_10029583 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2621 | Open in IMG/M |
3300005719|Ga0068861_100004197 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 9663 | Open in IMG/M |
3300005719|Ga0068861_100882845 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum | 845 | Open in IMG/M |
3300005843|Ga0068860_102577571 | Not Available | 528 | Open in IMG/M |
3300006057|Ga0075026_100612930 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 641 | Open in IMG/M |
3300006057|Ga0075026_100614940 | All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium | 640 | Open in IMG/M |
3300006175|Ga0070712_100010793 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 5775 | Open in IMG/M |
3300006354|Ga0075021_10855619 | Not Available | 589 | Open in IMG/M |
3300009092|Ga0105250_10568753 | Not Available | 522 | Open in IMG/M |
3300009101|Ga0105247_11363676 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 572 | Open in IMG/M |
3300009174|Ga0105241_10358900 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1268 | Open in IMG/M |
3300009177|Ga0105248_10142008 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011 | 2709 | Open in IMG/M |
3300009545|Ga0105237_12473501 | Not Available | 530 | Open in IMG/M |
3300009553|Ga0105249_10050713 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3783 | Open in IMG/M |
3300010375|Ga0105239_11328315 | Not Available | 830 | Open in IMG/M |
3300010375|Ga0105239_11383309 | Not Available | 812 | Open in IMG/M |
3300011119|Ga0105246_12064176 | Not Available | 551 | Open in IMG/M |
3300012955|Ga0164298_10515922 | Not Available | 802 | Open in IMG/M |
3300012958|Ga0164299_10249251 | Not Available | 1060 | Open in IMG/M |
3300012961|Ga0164302_10502768 | Not Available | 856 | Open in IMG/M |
3300012985|Ga0164308_12057498 | Not Available | 532 | Open in IMG/M |
3300012988|Ga0164306_11160227 | Not Available | 646 | Open in IMG/M |
3300012989|Ga0164305_10287985 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1207 | Open in IMG/M |
3300013296|Ga0157374_11935662 | Not Available | 615 | Open in IMG/M |
3300013297|Ga0157378_12654450 | Not Available | 553 | Open in IMG/M |
3300013306|Ga0163162_11905118 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011 | 680 | Open in IMG/M |
3300013308|Ga0157375_10137175 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2571 | Open in IMG/M |
3300014325|Ga0163163_12340844 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 593 | Open in IMG/M |
3300014745|Ga0157377_10888348 | Not Available | 665 | Open in IMG/M |
3300014969|Ga0157376_10172671 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 1970 | Open in IMG/M |
3300018028|Ga0184608_10130283 | Not Available | 1073 | Open in IMG/M |
3300018067|Ga0184611_1097467 | Not Available | 1020 | Open in IMG/M |
3300018072|Ga0184635_10136148 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia piptadeniae | 979 | Open in IMG/M |
3300018081|Ga0184625_10397822 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens | 711 | Open in IMG/M |
3300018469|Ga0190270_11148392 | Not Available | 812 | Open in IMG/M |
3300018476|Ga0190274_10053771 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2931 | Open in IMG/M |
3300018476|Ga0190274_11105007 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 872 | Open in IMG/M |
3300018476|Ga0190274_13802981 | Not Available | 511 | Open in IMG/M |
3300019377|Ga0190264_12368781 | Not Available | 501 | Open in IMG/M |
3300019889|Ga0193743_1210324 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 608 | Open in IMG/M |
3300021478|Ga0210402_10002091 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 19777 | Open in IMG/M |
3300021510|Ga0222621_1116454 | Not Available | 568 | Open in IMG/M |
3300022530|Ga0242658_1140817 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 614 | Open in IMG/M |
3300022756|Ga0222622_10124086 | Not Available | 1628 | Open in IMG/M |
3300025315|Ga0207697_10060979 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47 | 1569 | Open in IMG/M |
3300025893|Ga0207682_10180921 | Not Available | 963 | Open in IMG/M |
3300025898|Ga0207692_10052600 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 2071 | Open in IMG/M |
3300025901|Ga0207688_10030999 | All Organisms → cellular organisms → Bacteria | 2950 | Open in IMG/M |
3300025901|Ga0207688_10472066 | Not Available | 784 | Open in IMG/M |
3300025903|Ga0207680_10063038 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47 | 2267 | Open in IMG/M |
3300025903|Ga0207680_10229821 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1275 | Open in IMG/M |
3300025908|Ga0207643_10680135 | Not Available | 664 | Open in IMG/M |
3300025925|Ga0207650_10661401 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 881 | Open in IMG/M |
3300025926|Ga0207659_10445859 | Not Available | 1089 | Open in IMG/M |
3300025930|Ga0207701_10073315 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 3107 | Open in IMG/M |
3300025930|Ga0207701_10281994 | All Organisms → cellular organisms → Bacteria | 1445 | Open in IMG/M |
3300025931|Ga0207644_10319677 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1255 | Open in IMG/M |
3300025931|Ga0207644_10469943 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1035 | Open in IMG/M |
3300025936|Ga0207670_10588623 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 912 | Open in IMG/M |
3300025937|Ga0207669_10044991 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2598 | Open in IMG/M |
3300025972|Ga0207668_11582926 | Not Available | 591 | Open in IMG/M |
3300026035|Ga0207703_10290766 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1487 | Open in IMG/M |
3300026095|Ga0207676_12513313 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 512 | Open in IMG/M |
3300026118|Ga0207675_101036352 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 839 | Open in IMG/M |
3300026121|Ga0207683_10817952 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 865 | Open in IMG/M |
3300027897|Ga0209254_10803139 | Not Available | 636 | Open in IMG/M |
3300027902|Ga0209048_10019594 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 5887 | Open in IMG/M |
3300028379|Ga0268266_10042907 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 3864 | Open in IMG/M |
3300028381|Ga0268264_10678087 | Not Available | 1022 | Open in IMG/M |
3300028786|Ga0307517_10157492 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011 | 1536 | Open in IMG/M |
3300028811|Ga0307292_10340530 | Not Available | 632 | Open in IMG/M |
3300031057|Ga0170834_105033698 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 503 | Open in IMG/M |
3300031231|Ga0170824_110951778 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 535 | Open in IMG/M |
3300031231|Ga0170824_124172672 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1077 | Open in IMG/M |
3300031455|Ga0307505_10536001 | Not Available | 566 | Open in IMG/M |
3300031507|Ga0307509_10187174 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1927 | Open in IMG/M |
3300031938|Ga0308175_100850909 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1001 | Open in IMG/M |
3300031939|Ga0308174_10381622 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1131 | Open in IMG/M |
3300032013|Ga0310906_10625124 | Not Available | 745 | Open in IMG/M |
3300032074|Ga0308173_10731621 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 906 | Open in IMG/M |
3300033180|Ga0307510_10047014 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 4630 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 13.33% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 10.48% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 7.62% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 7.62% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 6.67% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 4.76% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.81% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 3.81% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 3.81% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.81% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 3.81% |
Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 2.86% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 2.86% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 2.86% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 2.86% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.86% |
Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 2.86% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.90% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.90% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 1.90% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.90% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.90% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.95% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.95% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.95% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300002244 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 | Host-Associated | Open in IMG/M |
3300003861 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Host-Associated | Open in IMG/M |
3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Environmental | Open in IMG/M |
3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Host-Associated | Open in IMG/M |
3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
3300006354 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 | Environmental | Open in IMG/M |
3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Host-Associated | Open in IMG/M |
3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
3300018072 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2 | Environmental | Open in IMG/M |
3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300019377 | Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T | Environmental | Open in IMG/M |
3300019889 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2 | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021510 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex | Environmental | Open in IMG/M |
3300022530 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027897 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes) | Environmental | Open in IMG/M |
3300027902 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Host-Associated | Open in IMG/M |
3300028811 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149 | Environmental | Open in IMG/M |
3300031057 | Oak Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031455 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S | Environmental | Open in IMG/M |
3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Host-Associated | Open in IMG/M |
3300031938 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1 | Environmental | Open in IMG/M |
3300031939 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2 | Environmental | Open in IMG/M |
3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
3300032074 | Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1 | Environmental | Open in IMG/M |
3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI24742J22300_100265761 | 3300002244 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALIIAAMTIFVFGXFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0031654_100475902 | 3300003861 | Freshwater Lake Sediment | MRKALSIAAMMIFVLGFIWQFGRWLLRWAGYGLGLRGLPGSYNAFVESFAAKIVNEGSVAWIAGPWLLISIGLIALIILRSRTTERRAHRE* |
Ga0062594_1001175582 | 3300005093 | Soil | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKVAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0062594_1008656311 | 3300005093 | Soil | IGATMMRKALTIAAMTIFVLGFFWQFGRWLLRCSGYGLGLRTRPDSYHDVVESLAEKIAGEASVGWIAGPWLLMSLGLMTLIILRARTTAVNVHSK* |
Ga0065715_109700552 | 3300005293 | Miscanthus Rhizosphere | MMRKALTIAAMTIFVLGFFWQFGRWLLRWSGYGLGLRTRPDSYHDVVESLAEKIAGEASVGWIAGPWLLMSLGLMTLIILRARTTAVNVHSK* |
Ga0070676_100862413 | 3300005328 | Miscanthus Rhizosphere | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWVLMSIGLMTLIILRSWTAEKSVHGE* |
Ga0070690_1000449745 | 3300005330 | Switchgrass Rhizosphere | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0070690_1008067512 | 3300005330 | Switchgrass Rhizosphere | MHKALCVAAMTISVFGFTWQFGRWLFRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE* |
Ga0070670_1008493642 | 3300005331 | Switchgrass Rhizosphere | LCVAAMTISVFGFTWQFGRWLFRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE* |
Ga0070677_100741463 | 3300005333 | Miscanthus Rhizosphere | MRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0068869_1002441175 | 3300005334 | Miscanthus Rhizosphere | MRKLLSIAATAIFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0070668_1002067042 | 3300005347 | Switchgrass Rhizosphere | MRKLLSIAATTIFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE* |
Ga0070669_1003910982 | 3300005353 | Switchgrass Rhizosphere | MRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE* |
Ga0070671_1010235902 | 3300005355 | Switchgrass Rhizosphere | QTPRIKAKFLGRRIMIKAQIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0070674_10001481610 | 3300005356 | Miscanthus Rhizosphere | MRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWAAEKNVHGE* |
Ga0070674_1007695072 | 3300005356 | Miscanthus Rhizosphere | MRKALSIAAMTVFVVGLVWQVGRWLLRWSGYGVGLRSRPGYYDLVESFAAKIASGDANIGWIIGPWLLMSIGFMALIVVRSRTTK* |
Ga0070713_1001432964 | 3300005436 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALTIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVETFAEKIASGPSVGWIAGPWLLMSIGLMA |
Ga0070701_101532241 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | SNGGCMMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0070711_1000203862 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALTIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVETFAEKIASGPNVGWIAGPWLLMSIGLMALIVLRSGATEKSVHGE* |
Ga0070700_1001003633 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALIIAAMTIFVFGYFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0070678_1005083372 | 3300005456 | Miscanthus Rhizosphere | MRKALSIAAMTVFVVGLVWQVGRWLLRWSGYGVGLRSRPGYYDLVESFAAKIASGDASIGWIIGPWLLMSIGFMALIVVRSRTTK* |
Ga0070672_1000160244 | 3300005543 | Miscanthus Rhizosphere | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0070696_1011761112 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | CMMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0068859_1004689043 | 3300005617 | Switchgrass Rhizosphere | MMRKLLSIAATTIFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE* |
Ga0068866_100295831 | 3300005718 | Miscanthus Rhizosphere | MRKALIIAAMTAFVLGCFWQFGRWLLRWSGYGLGLRSRPGGYYDFVDSFAENIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0068861_10000419717 | 3300005719 | Switchgrass Rhizosphere | MMRKLLSIAATAIFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0068861_1008828452 | 3300005719 | Switchgrass Rhizosphere | MRKALIIAAMTAFVLGCFWQFGRWLLRWSGYGLGLRSRPGGYYDFVDSFAENIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKSVHGE* |
Ga0068860_1025775712 | 3300005843 | Switchgrass Rhizosphere | SVMRKALIIAAMTAFVLGCFWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFAENIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKSVHGE* |
Ga0075026_1006129302 | 3300006057 | Watersheds | MMRKLLIGAAMTIFAVGCFWQFGRWLLRWSGYGLGLRSLPGGYQDFVESFAEKIASGSSILWIAGPWLLISIGLMILIVLRSWTTENNVRGG* |
Ga0075026_1006149402 | 3300006057 | Watersheds | RKALSIAAMAIFVSGFVWQCGRWLLRWAGYGLGLRGLPSSYNSFVESVAAKIANEVSIAWIVGPWLLMSIGLIALIILRSRTTEERAHGE* |
Ga0070712_1000107934 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALTIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVETFAEKIASGPSVGWIAGPWLLMSIGLMALIVLRSGATEKSVHGE* |
Ga0075021_108556192 | 3300006354 | Watersheds | RLGLQASGHMIMRKALSIAAMAIFVSGFVWQCGRWLLRWAGYGLGLRGLPSSYNSFVESVAAKIANEVSIAWIVGPWLLMSIGLIALIILRSRTTEERAHGE* |
Ga0105250_105687531 | 3300009092 | Switchgrass Rhizosphere | MMRKLLSIAATAIFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0105247_113636762 | 3300009101 | Switchgrass Rhizosphere | MMRKALTIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAQKSVHGE* |
Ga0105241_103589003 | 3300009174 | Corn Rhizosphere | MRKALIIAAMTIFVFGYFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAEKIAGASVGWIAGPWLLMSIGLMTL |
Ga0105248_101420086 | 3300009177 | Switchgrass Rhizosphere | SVAAMTIFVFGFTWQFVRWLFKWSGYGLGSRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0105237_124735011 | 3300009545 | Corn Rhizosphere | TSSTAFAHRPRIRTSRHLLQAKSQTPRIKAKFLGRRIMRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAETSVHGE* |
Ga0105249_100507135 | 3300009553 | Switchgrass Rhizosphere | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKSAHGE* |
Ga0105239_113283152 | 3300010375 | Corn Rhizosphere | MHKALSVAAMTIFVFGFTWQFGRWLFRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE* |
Ga0105239_113833091 | 3300010375 | Corn Rhizosphere | MRKALIIAAMTIFVFGYFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNA |
Ga0105246_120641762 | 3300011119 | Miscanthus Rhizosphere | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWT |
Ga0164298_105159221 | 3300012955 | Soil | MTIFVFGFFWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE* |
Ga0164299_102492513 | 3300012958 | Soil | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0164302_105027681 | 3300012961 | Soil | MRKALIIAAMTAFVLGCFWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKSVHGE* |
Ga0164308_120574981 | 3300012985 | Soil | MRKALSIAAMMVFVVGLVWQVGRWLLRWSGYGVGLRSRPGYYDLVESFAAKIASGDASIGWIIGPWLLMSIGFMALIVVRSRTTK* |
Ga0164306_111602271 | 3300012988 | Soil | IIAAMTAFVLGCFWQFGRWLLRWPGYGLGLRSRPGGYYDFVDSFAENIAGASVGWIAVPWLLMSIGLMTLMILRSWTAEKSVHGE* |
Ga0164305_102879852 | 3300012989 | Soil | MMRKALSIAAMSIFVFGFIWQFGRWLLRWSGYGLGLRSLPGGYRDFVESFAEKIANGAGVVWIAGPWLLMSIGLMTLIILRSRTAEENVRGE* |
Ga0157374_119356621 | 3300013296 | Miscanthus Rhizosphere | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIVGPWLLMSIGLMTLIILRSWTAQKSVHDE* |
Ga0157378_126544501 | 3300013297 | Miscanthus Rhizosphere | LGKLQTSSTAFAHRPRIRTSRHLLQAKSQTPRIKAKFLGRRIMRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0163162_119051181 | 3300013306 | Switchgrass Rhizosphere | MMRKLLSIAATTIFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKRVHGE* |
Ga0157375_101371753 | 3300013308 | Miscanthus Rhizosphere | TSRHLLQAKSQTPRIKAKFLGRRIMRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE* |
Ga0163163_123408441 | 3300014325 | Switchgrass Rhizosphere | IFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE* |
Ga0157377_108883482 | 3300014745 | Miscanthus Rhizosphere | MHKALCVAAMTISVFGFTWQFGRWLFRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTSKKSIHGE* |
Ga0157376_101726715 | 3300014969 | Miscanthus Rhizosphere | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLM |
Ga0184608_101302833 | 3300018028 | Groundwater Sediment | MRKVLSVAAMTIFVFGFTWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIIVRSWTTKESVHGE |
Ga0184611_10974671 | 3300018067 | Groundwater Sediment | MRKVLSVAAMTIFVFGFTWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTPEERVHGE |
Ga0184635_101361481 | 3300018072 | Groundwater Sediment | MRKALIIAAMTIFVVGCFWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLMTLIILRSWTPEERVHGE |
Ga0184625_103978222 | 3300018081 | Groundwater Sediment | IAAMTIFVFGFVWHVGRRLLRWSGYGLGFRSLPGGYYDFVESFAAKIASGARIGWIAGPWLLMSIGLMTLIIPRSRERASTKCRYKA |
Ga0190270_111483923 | 3300018469 | Soil | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVDSFAEKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNVHGE |
Ga0190274_100537713 | 3300018476 | Soil | MRKALSIAAMTVFVVGLVWQVGRWLLRWSGYGVGLRSRPGYYDLVESFAAKIASGDANIGWIIGPWLLMSIGFMALIVVRSRTTK |
Ga0190274_111050072 | 3300018476 | Soil | MRKLLSIAATTIFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE |
Ga0190274_138029811 | 3300018476 | Soil | MRKALSIAAMTIFAFGLVWQVGRWLLRWSGYGLGLRSLPGGYHDFVESFAAKIASEASIGWIAGPWLLMSIGLMTLVVL |
Ga0190264_123687811 | 3300019377 | Soil | MGDVMNKALSVFAMTIFVFGGIWQFGRWLLMWSGYGLGLRSQSGGYYDFVQSFADKIASGPSVGWIAGPWLLMSIGLMTLVILRSRTTSG |
Ga0193743_12103241 | 3300019889 | Soil | GFFWQFGRWLLRWSGYGLGLRSLPGGYHDFVETLAAKVASGPSIGWIAGPWLLMSIGLMTLIILRSWTIERNVHSE |
Ga0210402_1000209122 | 3300021478 | Soil | MRKALSIAAATIFVFGFIWQFGRWLLKWSGYGLGLRSLPGGYYDFVESFAAKIASGASIGWIAGPWLLMSIGLMTLIILRSWTTEENVHGE |
Ga0222621_11164541 | 3300021510 | Groundwater Sediment | MRKVLSVAAMTIFVFGVTWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTTKESVHGE |
Ga0242658_11408171 | 3300022530 | Soil | MRKALTIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVETFAEKIASGPSVGWIAGPWLLMSIGLMALIVL |
Ga0222622_101240863 | 3300022756 | Groundwater Sediment | MRKVLSVAAMTIFVFGFTWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTTKESVHGE |
Ga0207697_100609793 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRS |
Ga0207682_101809213 | 3300025893 | Miscanthus Rhizosphere | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE |
Ga0207692_100526004 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALTIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVETFAEKIASGPNVGWIAGPWLLMSIGLMALIVLRSGATEKSVHGE |
Ga0207688_100309992 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MMRKLLSIAATAIFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE |
Ga0207688_104720662 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MRKALIIAAMTIFVFGYFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE |
Ga0207680_100630381 | 3300025903 | Switchgrass Rhizosphere | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE |
Ga0207680_102298211 | 3300025903 | Switchgrass Rhizosphere | HHLPLQAKSQAPKMSDSWRCLMHKALCVAAMTISVFGFTWQFGRWLFRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE |
Ga0207643_106801352 | 3300025908 | Miscanthus Rhizosphere | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE |
Ga0207650_106614011 | 3300025925 | Switchgrass Rhizosphere | KALCVAAMTISVFGFTWQFGRWLFRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE |
Ga0207659_104458593 | 3300025926 | Miscanthus Rhizosphere | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAEKIAGASVGWIAGPWLMMSFRLDDINYSSFVDGRKE |
Ga0207701_100733153 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MMRKALTIAAMTIFVLGFFWQFGRWLLRWSGYGLGLRTRPDSYHDVVESLAEKIAGEASVGWIAGPWLLMSLGLMTLIILRARTTAVNVHSK |
Ga0207701_102819944 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | FGCFGQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE |
Ga0207644_103196774 | 3300025931 | Switchgrass Rhizosphere | MRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE |
Ga0207644_104699432 | 3300025931 | Switchgrass Rhizosphere | MMRKLLSIAATTIFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE |
Ga0207670_105886232 | 3300025936 | Switchgrass Rhizosphere | TIFVFGYFWQFGRWLLRWSGYGLGLRSLPGGYHEFVDSFAERIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKNAHGE |
Ga0207669_100449912 | 3300025937 | Miscanthus Rhizosphere | MMRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWAAEKNVHGE |
Ga0207668_115829262 | 3300025972 | Switchgrass Rhizosphere | MRKLLSIAATALFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHG |
Ga0207703_102907663 | 3300026035 | Switchgrass Rhizosphere | TTIFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE |
Ga0207676_125133132 | 3300026095 | Switchgrass Rhizosphere | MRKALIIAGMAIFVFGCFWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLLMSIGLMTLVILRS |
Ga0207675_1010363522 | 3300026118 | Switchgrass Rhizosphere | MRKLLSIAATTILVFGCFWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE |
Ga0207683_108179521 | 3300026121 | Miscanthus Rhizosphere | CLWQFGRWLLRWSGYGLGLRSQPGGYYELVESFAEKIASGPSIGWIAGPWLLMSIGLITLIVLRSGTAEKSFHGE |
Ga0209254_108031391 | 3300027897 | Freshwater Lake Sediment | MRNALSIAALIVFASGFIWQCGRWLLRWAGYGLGLRAIPGSYSSFVESLAAKIANEVSIAWIVGPWLLMGTGLIALIILRSRTIEKRVRGE |
Ga0209048_100195949 | 3300027902 | Freshwater Lake Sediment | MRKALSIAAMMIFVLGFIWQFGRWLLRWAGYGLGLRGLPGSYNAFVESFAAKIVNEGSVAWIAGPWLLISIGLIALIILRSRTTERRAHRE |
Ga0268266_100429073 | 3300028379 | Switchgrass Rhizosphere | MHKALCVAAMTISVFGFTWQFGRWLFRWSGYGLGLRSQPGGYYDFVDSFAEKIAGTSVGWIAGPWLLMSIGLMTLIILRSWTAKKSIHGE |
Ga0268264_106780872 | 3300028381 | Switchgrass Rhizosphere | MRKLLSIAATAIFVFGCFWQFERWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE |
Ga0307517_101574923 | 3300028786 | Ectomycorrhiza | MMRKLLSIAATTIFVFGCLWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTAEKRVHGE |
Ga0307292_103405302 | 3300028811 | Soil | MRKVLSVAAMTIFVFGFTWQFGRWLLRRSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIIVRSWTTKESVHGE |
Ga0170834_1050336982 | 3300031057 | Forest Soil | VFGFFWQFGRWLLRWSGYGLGLRNLPGGYYDLVESFAERIASGAGVGWIAGPWLLMSIGLMILIILHSWTAEENARGE |
Ga0170824_1109517781 | 3300031231 | Forest Soil | KALAIAAMAIFVFGFFWQFGRWLLRWSGYGLGLRNLPGGYYDLVESFAERIASGASVGWIAGPWLLMSIGLMILIILHSWTAEENARGE |
Ga0170824_1241726721 | 3300031231 | Forest Soil | MMRKALIIVAMTIFVFGCFWQFGRWLLRWSGYGLGLRTLPGGYYAFVESFAEKIASGPSVGWIAGPWLLISIGLTGLIILYSWTTEKNARGK |
Ga0307505_105360011 | 3300031455 | Soil | MRKALIIAAMTIFVFGYFWQFGRWLLRWSGYGLGLRSLPGGYYDFVESFLAKTASGASIGWIAGPWMLMSIGLMALIILRSRTTEKNIHGK |
Ga0307509_101871741 | 3300031507 | Ectomycorrhiza | MRKALSVAAMTIFMLGFIWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTTKESVHGEFTHSEAAN |
Ga0308175_1008509091 | 3300031938 | Soil | MRKVLISAAMTIFVIGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVESFAEKISNGPGVGWFAGPWLLIGIGLLTLIILRSWTTESNVRRG |
Ga0308174_103816222 | 3300031939 | Soil | MRKVLISAAMTIFVIGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVESFAEKIANAPGVGWIAGPWLLIGIGLLTLIILRSWTTESNVRRG |
Ga0310906_106251242 | 3300032013 | Soil | MRKALIIAAMTIFVFGCFWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFAEKIAGASVGWIAGPWLMMSFGLMTLIILRSWTAEKNVHGE |
Ga0308173_107316212 | 3300032074 | Soil | MRKVLISAAMTIFVIGCFWQFGRWLLRWSGYGLGLRSLPGGYYDFVESFAEKIANGPGVGWIAGPWLLIGIGLLTLIILRSWTTESNVRRG |
Ga0307510_100470143 | 3300033180 | Ectomycorrhiza | MRKALSVAAMTIFMLGFIWQFGRWLLRWSGYGLGLRSQPGGYYDFVDSFADKIAGASVGWIAGPWLLMSIGLMTLIILRSWTTKESVHGE |
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