Metagenome / Metatranscriptome Family F095850

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F095850
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	106 residues
Representative Sequence	MSYLTGLARYSLAAQGTQMPAGPSQPARPDPAASRRKRVARGIILAWFIRWPLDRRFWHAMVMLGIALGAARASGRDSRARMVAWDIRQRERQMKATAAHPARAARRA
Number of Associated Samples	79
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.95 %
% of genes near scaffold ends (potentially truncated)	24.76 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.143 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.97% β-sheet: 0.00% Coil/Unstructured: 36.03%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07883	Cupin_2	26.67
PF03860	DUF326	3.81
PF13672	PP2C_2	1.90
PF06736	TMEM175	1.90
PF00903	Glyoxalase	1.90
PF02687	FtsX	0.95
PF06441	EHN	0.95
PF00196	GerE	0.95
PF00463	ICL	0.95
PF13411	MerR_1	0.95
PF00528	BPD_transp_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.90
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.95
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.38 %
Unclassified	root	N/A	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	12.38 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.90 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.95 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	11.43 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.90 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.95 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Nesterenkonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia	11.43 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.90 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.95 %
Janibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter	0.95 %
Prauserella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.62 %
Nesterenkonia muleiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	11.43 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.90 %
Prauserella shujinwangii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella → Prauserella shujinwangii	0.95 %
Actinoplanes globisporus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	0.95 %
Janibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100436208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	955	Open in IMG/M
3300004633\|Ga0066395_10139585	Not Available	1216	Open in IMG/M
3300005332\|Ga0066388_101389709	Not Available	1218	Open in IMG/M
3300005332\|Ga0066388_103759588	Not Available	774	Open in IMG/M
3300005332\|Ga0066388_105079315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	668	Open in IMG/M
3300005436\|Ga0070713_100198112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1812	Open in IMG/M
3300005450\|Ga0066682_10608505	Not Available	685	Open in IMG/M
3300005540\|Ga0066697_10606118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	607	Open in IMG/M
3300005587\|Ga0066654_10800712	Not Available	535	Open in IMG/M
3300005713\|Ga0066905_100995804	Not Available	739	Open in IMG/M
3300005764\|Ga0066903_100962848	Not Available	1554	Open in IMG/M
3300005764\|Ga0066903_103921098	Not Available	798	Open in IMG/M
3300005764\|Ga0066903_107389417	Not Available	567	Open in IMG/M
3300005983\|Ga0081540_1005883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes globisporus	9064	Open in IMG/M
3300006175\|Ga0070712_100969805	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300006796\|Ga0066665_11062258	Not Available	618	Open in IMG/M
3300006797\|Ga0066659_11508861	Not Available	563	Open in IMG/M
3300009137\|Ga0066709_100890342	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300009792\|Ga0126374_10018043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3021	Open in IMG/M
3300010043\|Ga0126380_10015132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3572	Open in IMG/M
3300010043\|Ga0126380_10954877	Not Available	717	Open in IMG/M
3300010046\|Ga0126384_11075563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300010047\|Ga0126382_10200628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1419	Open in IMG/M
3300010154\|Ga0127503_10039799	Not Available	573	Open in IMG/M
3300010154\|Ga0127503_10811607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300010358\|Ga0126370_10056724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2520	Open in IMG/M
3300010358\|Ga0126370_11576819	Not Available	627	Open in IMG/M
3300010360\|Ga0126372_10031541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	3335	Open in IMG/M
3300010361\|Ga0126378_13263915	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010362\|Ga0126377_12962131	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010376\|Ga0126381_101773449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300010376\|Ga0126381_102292339	Not Available	776	Open in IMG/M
3300010398\|Ga0126383_10493987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1281	Open in IMG/M
3300010398\|Ga0126383_13274648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300012198\|Ga0137364_10388818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	1043	Open in IMG/M
3300012198\|Ga0137364_10750930	Not Available	737	Open in IMG/M
3300012200\|Ga0137382_10785994	Not Available	684	Open in IMG/M
3300012201\|Ga0137365_10004881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10754	Open in IMG/M
3300012202\|Ga0137363_11549257	Not Available	554	Open in IMG/M
3300012208\|Ga0137376_10221898	Not Available	1638	Open in IMG/M
3300012208\|Ga0137376_10316148	Not Available	1355	Open in IMG/M
3300012210\|Ga0137378_11497635	Not Available	586	Open in IMG/M
3300012211\|Ga0137377_10409471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	1294	Open in IMG/M
3300012285\|Ga0137370_10759979	Not Available	602	Open in IMG/M
3300012359\|Ga0137385_10945552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	712	Open in IMG/M
3300012948\|Ga0126375_10527778	Not Available	886	Open in IMG/M
3300012957\|Ga0164303_10848682	Not Available	634	Open in IMG/M
3300012989\|Ga0164305_10877276	Not Available	752	Open in IMG/M
3300016371\|Ga0182034_10211097	Not Available	1508	Open in IMG/M
3300017939\|Ga0187775_10018032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Prauserella → Prauserella shujinwangii	1900	Open in IMG/M
3300017947\|Ga0187785_10003938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4867	Open in IMG/M
3300017947\|Ga0187785_10054470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1508	Open in IMG/M
3300017966\|Ga0187776_10398620	Not Available	920	Open in IMG/M
3300017966\|Ga0187776_10968790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	623	Open in IMG/M
3300017999\|Ga0187767_10247085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter	586	Open in IMG/M
3300018029\|Ga0187787_10029734	Not Available	1518	Open in IMG/M
3300018058\|Ga0187766_10408702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	899	Open in IMG/M
3300018060\|Ga0187765_10062822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1942	Open in IMG/M
3300018060\|Ga0187765_10696166	Not Available	667	Open in IMG/M
3300018064\|Ga0187773_10025656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2564	Open in IMG/M
3300018064\|Ga0187773_10306542	Not Available	888	Open in IMG/M
3300018064\|Ga0187773_10310356	Not Available	884	Open in IMG/M
3300018089\|Ga0187774_10313028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300020581\|Ga0210399_11164355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300021478\|Ga0210402_10365563	Not Available	1339	Open in IMG/M
3300021478\|Ga0210402_11967739	Not Available	510	Open in IMG/M
3300021560\|Ga0126371_10839010	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300025906\|Ga0207699_10435076	Not Available	939	Open in IMG/M
3300027874\|Ga0209465_10097585	Not Available	1439	Open in IMG/M
3300031543\|Ga0318516_10366464	Not Available	831	Open in IMG/M
3300031640\|Ga0318555_10260053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	938	Open in IMG/M
3300031736\|Ga0318501_10525968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	646	Open in IMG/M
3300031751\|Ga0318494_10824327	Not Available	544	Open in IMG/M
3300031778\|Ga0318498_10154344	Not Available	1045	Open in IMG/M
3300031782\|Ga0318552_10497221	Not Available	622	Open in IMG/M
3300031795\|Ga0318557_10435314	Not Available	603	Open in IMG/M
3300031797\|Ga0318550_10347192	Not Available	719	Open in IMG/M
3300031799\|Ga0318565_10045091	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300031819\|Ga0318568_10553705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300031845\|Ga0318511_10282996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300031859\|Ga0318527_10219803	Not Available	806	Open in IMG/M
3300032001\|Ga0306922_10505474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	1288	Open in IMG/M
3300032010\|Ga0318569_10151204	Not Available	1068	Open in IMG/M
3300032044\|Ga0318558_10064833	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1649	Open in IMG/M
3300032054\|Ga0318570_10080942	Not Available	1396	Open in IMG/M
3300032174\|Ga0307470_10385037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300032205\|Ga0307472_101269980	Not Available	707	Open in IMG/M
3300032261\|Ga0306920_101410661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	998	Open in IMG/M
3300032770\|Ga0335085_10008648	All Organisms → cellular organisms → Bacteria	15505	Open in IMG/M
3300032770\|Ga0335085_10015260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11153	Open in IMG/M
3300032770\|Ga0335085_10066989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4768	Open in IMG/M
3300032770\|Ga0335085_10155699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2859	Open in IMG/M
3300032782\|Ga0335082_10695995	Not Available	878	Open in IMG/M
3300032783\|Ga0335079_10241082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1991	Open in IMG/M
3300032783\|Ga0335079_10285077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	1806	Open in IMG/M
3300032783\|Ga0335079_10873605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Nesterenkonia → Nesterenkonia muleiensis	926	Open in IMG/M
3300032805\|Ga0335078_10098457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4227	Open in IMG/M
3300032892\|Ga0335081_11238767	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300032892\|Ga0335081_11394830	Not Available	783	Open in IMG/M
3300032954\|Ga0335083_10180952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300033158\|Ga0335077_10004224	All Organisms → cellular organisms → Bacteria	17509	Open in IMG/M
3300033158\|Ga0335077_10243181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1998	Open in IMG/M
3300033158\|Ga0335077_10400654	Not Available	1474	Open in IMG/M
3300033158\|Ga0335077_10900345	Not Available	891	Open in IMG/M
3300033803\|Ga0314862_0088879	Not Available	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.14%
Aquatic	Environmental → Aquatic	1.90%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.14%
Freshwater	Environmental → Aquatic → Freshwater	1.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	29.52%
Loam	Environmental → Terrestrial → Soil → Loam	11.43%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	29.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	15.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	13.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1004362081	3300004479	Soil	MTNLAGLTRYALAAQGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFVRWPLDRRFWHLLAMLGIAVGAARASARDNQARVVAWDARTRERQMKAIAARARATKRA*
Ga0066395_101395851	3300004633	Tropical Forest Soil	MSYLTGLARFTTLAAQGTQMPAGPSQPARPDPVAGRRKRVTRGIILWWFLRWPLDRRFWHVMAMLAIALGAARASGRDSRARMVAWDIKQRERAMKAAASHAAHRTRRA*
Ga0066388_1013897091	3300005332	Tropical Forest Soil	MTNLAGLARHAPAAPGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFFRWPLDRRFWHLLVMLGIAVGAARASGRDSRARMVAWDIRQRERQMKAIAARDARAAKRT*
Ga0066388_1037595881	3300005332	Tropical Forest Soil	MTNLAGLTRYALAAQGTQMAAGPRQPSRPDPTASRRKRVTRGIILAWFVRWPLDRRFWHLLVMLGIAVGAARASGRDSRARMVAWDIRQRER
Ga0066388_1050793151	3300005332	Tropical Forest Soil	MGYLTGLARFAAAAQATQMPAGPGQPARPVPPASHRRHVVRTIILAWLARWPFDRRFWHAMAMLGIAVGAARASGRDSRARMVAWDIRQRERHTKAMAARTARSARRA*
Ga0070713_1001981122	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGYLTGLARFAVAAQATQMPAGPSQPARPDPVASRRKRVARGVILAWLFRWPLDRRFWHAVAMLGIAVGAARASGRDSRARMVAWDIRQRERQMKAMAARAGRSARRA*
Ga0066682_106085052	3300005450	Soil	MSYLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDTRQRERQMKAIAARAARTGRRA*
Ga0066697_106061182	3300005540	Soil	MSYLTGLVRLTTLAAQGTQMSAGPSQPARPAPTASRRKRVARGIILAWLIRWPLDRRFWHAVAMLGIALGAARASGRDSRARMVAWDIRQRERQMKAAAAQAAHRTPRA*
Ga0066654_108007122	3300005587	Soil	MSYLTGLARLTTLAAQGTQMSAGPSQPARPDPAASRRKRVARGIILAWFFRWPLDRRFWHAVAMLGIAVGAARASGRDSRARMVAWDIRQRERQM
Ga0066905_1009958042	3300005713	Tropical Forest Soil	MTNLAGLTRYALAAQGTQMAAGPRQPSRPDPTASRRKRVTRGIILAWFVRWPLDRRFWHLLVMLGIAVGAARASGRDSRARMVAWDIRQRERHMKAIAARDAHAARRA*
Ga0066903_1009628482	3300005764	Tropical Forest Soil	MTNLAGLARHALAAPGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFFRWPLDRRFWHLLVMLGIAVGAARASGRDSRARMVAWDIRQRERQMKAIAARDARAAKRA*
Ga0066903_1039210981	3300005764	Tropical Forest Soil	MTNLAGLSRYALAAQGTQMAAGSGQPARPDPAVGRRKRVARGIILAWLIRWPLDRRFWKAMAMLGIALGAARASGRDSRARMVAWDIRQRERQMKAAAAHARAARRA*
Ga0066903_1073894171	3300005764	Tropical Forest Soil	MSYLTVLARFTTLAAQGTQMSAGPSQPARPDPVAGRRKRVTRGVILWWFLRWPMDRRFWHAVVMLGIALGAARASGRDSRARMVAWDIRQRER
Ga0081540_100588310	3300005983	Tabebuia Heterophylla Rhizosphere	MTNLAGLTRYALAAQGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFVRWPLDRRFWHLVVMLGIAVGAARSSGRDSRARMVAWDIRQRERQMKAIAARDARAGRRP*
Ga0070712_1009698052	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGYLTGLARFAVAAQATQMPAGPSQPTRPDPVASRRKRVARGVILAWFFRWPLDRRFWHAVAMLGIALGAARASGRDSRTRMVAWDIRQRERAMKAAAAHAAHGARGA*
Ga0066665_110622582	3300006796	Soil	MSYLTGLARFTTLAAQGPQMPAGPRQPARPDPAASRRKRVARGIILAWFFRWPLDRRFWHAVAVLGIAVGAARASGRDSRARMVAWDIRQRERQMKAMAARTGRAGRRA*
Ga0066659_115088611	3300006797	Soil	MSYLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDTRQRERQMKAIAARAARAGRRA*
Ga0066709_1008903421	3300009137	Grasslands Soil	MSYLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVARGIILAWFFRCPLDRRFWHAVAMLGIAVGAARASGRDSRARMVAWDIRQRERQMKAMAARTGRAGRRA*
Ga0126374_100180433	3300009792	Tropical Forest Soil	MTNLAGLARHALAAPGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFVRWPLDRRFWHLLVMLGIAVGAARASGRDSRARMVAWDIRQRERQMKAIAARDARAAKRA*
Ga0126380_100151322	3300010043	Tropical Forest Soil	MSYLTGLARFAVAAQATRMPAGPGQPARPVPPASHRRHVVRTIILAWLARWPFDRRFWHAMAMLGIAVGAARASGRDSRARMVAWDIRQRERHTKAMAARTARSARRA*
Ga0126380_109548771	3300010043	Tropical Forest Soil	MTNLAGLSRYAVAAQGTQMAAGSGPPSRPDPAVGRRRRVARGIILAWFIRWPLDRRFWKAMAMLGIALGAARASGRDSRARMVAWDIRQRERHMKATAAHAARAARRA*
Ga0126384_110755631	3300010046	Tropical Forest Soil	MTNLAGLARHALAAPGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFVRWPLDRRFWHILAMLGIALGAARASGRDSRARMVAWDIRQRERHTKATAARAARTARRP*
Ga0126382_102006281	3300010047	Tropical Forest Soil	YLTGLARFTVAAQATRMPAGPGQPARPVPPAGHRKHVVRTIFLAWLARWPFDRRFWHAMAMLGLAVGAARASGRDSRARMVAWDIRQRERHTKAMATWTARSARRA*
Ga0127503_100397991	3300010154	Soil	MSYLAGLARFITLAAQGTQMPAGPSQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAIAARAARAGRRA*
Ga0127503_108116071	3300010154	Soil	MGYLNGLARFAVAAQATQMPAGPGQPARPVPAAGRRKRVARGIILAWLFRWPLDRRFWHAVAMVAIAAGAARASGRDSRARMVAWDIRQRERQMKAMAARATHSARRA*
Ga0126370_100567244	3300010358	Tropical Forest Soil	MTNLAGLSRYALAAQGTQMAAGSGQPSRPDPAVGRRKRVARGIILAWLIRWPLDRRFWKAMAMLGIALGAARASGRDSRARMVAWDIRQRERQMKAAAAHARAARRA*
Ga0126370_115768191	3300010358	Tropical Forest Soil	MSYLTGLARFTTLAAQGTQMPAGPSQPARPDPVAGRRKRVTRGIILWWFLRWPLDRRFWHVMAMLAIALGAARASGRDSRARMVAWDIKQRERALKAAAAHAAHRTRRA*
Ga0126372_100315412	3300010360	Tropical Forest Soil	MGYLTDLARFAVAAQATQIPAGPGQPARPDPVASRRKRVARGIILAWLFRWPLDRRFWHAMALLAIALGAARASGRDSRARMVAWDIRQRERQTKATAARAARTARRA*
Ga0126378_132639151	3300010361	Tropical Forest Soil	LTGLARFTTLAAQGTQMPAGPSQSARPDPVAGRRKRVTRGIFLWWFLRWPLDRRFWHVMAMLAIALGAARASGRDQRARMVAWDIKQRERALKAAAAHAAHRTHRA*
Ga0126377_129621312	3300010362	Tropical Forest Soil	MSYLTGLARFTTLTAQGTQMPAGPSQPARPDPVAGRRKRVTRGIILWWFLRWPLDRRFWHIMAMLAIALGAARASGRDSRARMVAWDIKQRERAMKAAASHAAHRTRRA*
Ga0126381_1017734491	3300010376	Tropical Forest Soil	MSYLTGLARFTTLAAQGTQMPAGPSQSARPDPVAGRRKRVTRGIFLWWFLRWPLDRRFWHVMAMLAIALGAARASGRDQRARMVAWDIKQRERALKAAAAHAAHRTHRA*
Ga0126381_1022923391	3300010376	Tropical Forest Soil	MSYLTGLARFTTLAAQGTQMPAGPSQPARPDPVAGRRKRVTRGIILWWFLRWPLDRRFWHVMAMLAIALGAARASGRDSRARMVAWDIKQRERAMRAAASHAAHRTRRA*
Ga0126383_104939871	3300010398	Tropical Forest Soil	MTNLAGLARHALAAPGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFVRWPLDRRFWHILAMLGIALGAARASGRDSRARMVAWDIRQRERHMKAIAARDTRAGRGA*
Ga0126383_132746482	3300010398	Tropical Forest Soil	MPAGPGQPARPDPVASRRKRVARGIILAWLFRWPLDRRFWHAMALLAIALGAARASGRDSRARMVAWDIRQRERHTKATAARAARTARRA*
Ga0137364_103888182	3300012198	Vadose Zone Soil	MSYLTGLARLTTLAAQGTQMSAGPSQPARPAPTASRRKRVARGIILAWLIRWPLDRRFWHAVAMLGIALGAARASGRDSRARMVAWDIRQRERQMKAAAAQAAHRPPRA*
Ga0137364_107509302	3300012198	Vadose Zone Soil	MSYLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAIAARAARAGRRA*
Ga0137382_107859941	3300012200	Vadose Zone Soil	VIYLTGLSRFTTLAAQGTQMPAGPSRPARPDPAASRRRRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAIAARAARAGRRA*
Ga0137365_100048816	3300012201	Vadose Zone Soil	MSYLTGLARFTTLAAQGTQMPAGPSQPARPDPAASRRKRVGRGIMLAWLFRWALDRRFWHAVVMLVIALGAARASAHDSQARMVAWDARQRERQMKAPAARAARAGPRA*
Ga0137363_115492571	3300012202	Vadose Zone Soil	RFTTLAVQGTQMPVGPSQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAIAARAARAGRRA*
Ga0137376_102218981	3300012208	Vadose Zone Soil	MSYLTGLARFTTLAAQGTQMPAGPSQPARPDPAASRRKRVGRGILLAWLFRWTLDRRFWHAVVMLAIALGAARASAHDSQARMVAWDARQRERQMKAMAARAGRRA*
Ga0137376_103161482	3300012208	Vadose Zone Soil	MSHLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAIAARAARTGRRA*
Ga0137378_114976351	3300012210	Vadose Zone Soil	MSYLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLAIALGSARASAHDSQARMVAWDARQRERQMKAIAARAARTGRRA*
Ga0137377_104094711	3300012211	Vadose Zone Soil	MSYLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLAIALGSARASAHDSQARMVAWDARQRERQMKAIAARSARAGRRA*
Ga0137370_107599791	3300012285	Vadose Zone Soil	MSHLTGLARFTTLAAQGTQMPAGPRQPARPDPAASRRKRVGRGILLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAIAARAARAGRRA*
Ga0137385_109455521	3300012359	Vadose Zone Soil	TGLARFTTLAAQGTQMSAGPSQPARPDPAASRRKRVARGIMLAWLFRWPLDRRFWYAVAMLAIALGSARASAHDSQARMVAWDTRQRERQMKAIAARAARAGRRA*
Ga0126375_105277782	3300012948	Tropical Forest Soil	MSYLTGLARFAVTAQETQMSTGPSGPARPVPPAGHRRHVVRTIILAWLARWPFDRRFWHAMAMLGIAVGAARASGRDSRARMVAWDIRQRERHTKAMAARTARSARRA*
Ga0164303_108486821	3300012957	Soil	MGYLTGLGRFAVAAQATQMPAGPSQPARPDPAVSRRKRVARGIMLAWLFRWPLDRRFWHAVAILGIAVGAARASGRDSRARMVAWDIRQRERQMKAMAARAGRSARRA*
Ga0164305_108772762	3300012989	Soil	MGYLTGLARFAVAAQATQMPAGPSQPARPDPAVSRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAMAARATRAGRRA*
Ga0182034_102110971	3300016371	Soil	MSYLTGLGRFATLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRA
Ga0187775_100180323	3300017939	Tropical Peatland	MSYLTGLARYSLAAQGTQMPAGPSQPARPDPAASRRKRVARGIILAWFIRWPLDRRFWHAMVMLGIALGAARASGRDSRARMVAWDIRQRERQMKATAAHPARAARRA
Ga0187785_100039384	3300017947	Tropical Peatland	MTNLAGPSRYALAAQGTQMAAGSRPPARPDPTASRRKHVARGIILAWFARWPFDRRFWRALVMLAILLGAARASGRDSRARMVAWDIRQRERQMKATAAHATRAARRA
Ga0187785_100544702	3300017947	Tropical Peatland	MSYLTGLARFAVAAPGTQMPAGPSQSARPDPVAGRRKRVTRGVILWWFLRWPLDRRFWHAVVMLGIALGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRPRRS
Ga0187776_103986202	3300017966	Tropical Peatland	MTNLAGLTRYALAAQGTQMAAGSRQPSRPDPTASRRKRVARGIILAWFARWPFDRRFWHAMALLAIAVGAARASGRDSRARMVAWDIRQRERHMKAAAPRGGRAARRA
Ga0187776_109687902	3300017966	Tropical Peatland	SRYALAAQGTQLAAGSRQPSRPDPAVGRRKRVARGIILAWFLRWPLDRRFWKAMAMLGIALGAARASGRDSRARMVAWDIRQRERQMKATAAHPARAARRA
Ga0187767_102470851	3300017999	Tropical Peatland	MSYLTGLARFSLAAPGTQMPAGPGQPARPDPTASRRKRVARGIILAWLLRWPLDRRFWHTLAMLGIAVAAARASGRDSRARMVAWDIRQRERQMKAMAHRATRTARRA
Ga0187787_100297342	3300018029	Tropical Peatland	MTNLAGLTRYALAAQGTQMAAGSRQPSRPDPTASRRKRVARGIILAWFARWPFDRRFWHAMALLAIAVGAARASGRDSRARMVAWDIRQRERHMKAVAARGGGAARRA
Ga0187766_104087021	3300018058	Tropical Peatland	MSYLTGLARFTALSAQGTQMSAGPSQAARPDPTASRRKRVARGIILAWLLRWPLDRRFWHLVAMLVIALGAARASGRDSRARMVAWDIKQRERQMKAMAHRAARSARRA
Ga0187765_100628222	3300018060	Tropical Peatland	MSYLTGLTRFAALSAQGTQMSAGPSQAARPDPTASRRKRVARGIILAWFLRWPLDRRFWHLVAMLVIALGAARASGRDSRARMVAWDIKQRERQMKAMAHRAARGARRA
Ga0187765_106961661	3300018060	Tropical Peatland	MSYLTGLTRFAVAAQGTQMSAGPGQQARPDPVAGRRKHVTRTIILAWVVRWPFDRRFWHAMAMLAIAVGAARASGRDSRARMVAWDIKQRERQMKAIAARAARTGRRA
Ga0187773_100256563	3300018064	Tropical Peatland	MTNPAGLSRYALAAQGTQLAAGSRQPSRPDPAVGRRKRVARGIILAWFLRWPLDRRFWKAMAMLGIALGAARASGRDSRARMVAWDIRQRERQMKATAAHPARAARRA
Ga0187773_103065421	3300018064	Tropical Peatland	MSYLTGLARYSLAAQGTQMPAGPSLPARPDPAASRRKRVARGIILAWFIRWPLDRRFWHAMVMLGIALGAARASGRDSRARMVAWDIRQRERQMKAAANRAARTARRA
Ga0187773_103103562	3300018064	Tropical Peatland	MTNLAGLTRYALAAQGTQMAAGSRQPSRPDPTASRWKRVARGIILAWFARWPFDRRFWHAMALLAIAVGAARASGRDSRARMVAWDIRQRERHMKAAAAQGGRAARRA
Ga0187774_103130281	3300018089	Tropical Peatland	MSYLTGLARYSLAAQGTQMPAGPSQPGRPDPAASRRKRVARGIILAWFIRWPLDRRFWHAMVMLGIALGAARASGRDSRARMVAWDIRQRERQMKAAANRAARTARRA
Ga0210399_111643551	3300020581	Soil	MGYLTGLARFTTLATQGTQMSAGPGQPARPDPAAGRRKRVARGIILAWFFRWPLDRRFWHLVAMLAIAAGAARASGRDSRGRMVAWDIRQRERQMKAMAARGARSARRA
Ga0210402_103655632	3300021478	Soil	MGYLTGLGRFAVAAQATQMPAGPSQPARPDPAVSRRKRVARGIMLAWLFRWPLDRRFWYAVAMLVIALGSARASAHDSQARMVAWDARQRERQMKAMAARATRAGRRA
Ga0210402_119677391	3300021478	Soil	MGYLNGLARFAVAAPATQMPAGPGQPARPVPAAGRRKRVARGIILAWLFRWPLDRRFWHAVAMVAIAAGAARASGRDNRARMVAWDIR
Ga0126371_108390102	3300021560	Tropical Forest Soil	MSYLTGLARFTTLAAQGTQMPAGPSQPARPDPVAGRRKRVTRGIILWWFLRWPMDRRFWHAVVMLGIALGAARASGRDSRARMVAWDIKQRERAMKAAAAHAAHRTRRA
Ga0207699_104350762	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGYLTGLARFAVAAQATQMPAGPSQPARPDPVASRRKRVARGVILAWLFRWPLDRRFWHAVAMLGIAVGATRASGRDSRARMVAWDIRQRERQMKAMAARAGRSARRA
Ga0209465_100975852	3300027874	Tropical Forest Soil	MSYLTGLARFTTLAAQGTQMPAGPSQPARPDPVAGRRKRVTRGIILWWFLRWPLDRRFWHVMAMLAIALGAARASGRDSRARMVAWDIKQRERAMKAAAAHAAHRARR
Ga0318516_103664642	3300031543	Soil	MSYLTGLGRFATLAAQGTQMSAGPSQPARSDPVAIRRKRVTRGIILWWFLRWPLDRRFWKAMAMLAIALGAARASGRDSRARMVAWDIRQRE
Ga0318555_102600532	3300031640	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRA
Ga0318501_105259681	3300031736	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHAMVMLAIALGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRA
Ga0318494_108243271	3300031751	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRER
Ga0318498_101543442	3300031778	Soil	MSYLTGLGRFATLAAQGTQMSAGPSQPARSDPVAIRRKRVTRGIILWWFLRWPLDRRFWKAMAMLAIALGAARASGRDSRARMVAWDIRQRERAMK
Ga0318552_104972211	3300031782	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMK
Ga0318557_104353141	3300031795	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRAR
Ga0318550_103471922	3300031797	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKA
Ga0318565_100450914	3300031799	Soil	MGYLTGLARFAVAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRA
Ga0318568_105537052	3300031819	Soil	MGYLTGLARFAVAAQGTQMSVGSSQPARPDPAASRRKRVARGVILAWFFRWALDRRFWHAVVMLAIAAGAARASGRDSRARMVAWDIRQRERQMKAMAARAARSARRA
Ga0318511_102829962	3300031845	Soil	MSYLTGLGRFATLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRT
Ga0318527_102198031	3300031859	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAARAAHRGRRA
Ga0306922_105054742	3300032001	Soil	MSYLTGLARFTTLAAQGTQMSAGSSQPARSDPVAGRRKRVTRGIILWWFLRWPLDRRFWHAMAMLVIALGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRA
Ga0318569_101512042	3300032010	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAA
Ga0318558_100648334	3300032044	Soil	SYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRA
Ga0318570_100809422	3300032054	Soil	MSYLTGLGRFTTLAAQGTQMSAGPSQPARSDTVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMKAAAAHAAHRARRA
Ga0307470_103850371	3300032174	Hardwood Forest Soil	LTGLARFAVAAQATQLPAGPSQPARPDPVASRRKRVARGVILAWLFRWPLDRRFWHAVAMLGIAVGAARASGRDSRARMVAWDIRQRERQMKAMAARTGGSARRA
Ga0307472_1012699801	3300032205	Hardwood Forest Soil	MTKLAGLSRYALAAQGTQMAVGSRPPSRPGPTAGRRKRVARGIILAWFIRWPLDRRFWHAMAILGIALGAARASGRDSRARMVAWDIRQRERQMKATATRARAARRA
Ga0306920_1014106612	3300032261	Soil	MSYLTGLARFTTLAAQGTQMSAGPSQPARSDPVASRRKRVTIGIVLWWFLRWPLDRRFWHTMAMLAIAFGAARASGRDSRARMVAWDIRQRERAMRARRA
Ga0335085_100086483	3300032770	Soil	MSYLTGLARFSLAAPGTQMSAGPGQPARPDPTASRRKRVARGIILAWLLRWPLDRRFWHTMAILGIAVAAARASGRDSRARMVAWDIRQRERQTKAMAHRAARTARRA
Ga0335085_1001526010	3300032770	Soil	MTNLAGLTRYALAAQGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFARWPFDRRFWHAMALLAIAVGAARASGRDSRARMVAWDIRQRERHTKAVAARGGRAARRA
Ga0335085_100669892	3300032770	Soil	MSYLTGLARFSLAVQGTQMSAGPGQPARPDPTASRRKRVARGIILAWLLRWPLDRRFWHTMAMLGIALAAARASGRDSRARMVAWDIRQRERQMKAMAHRAARTARRA
Ga0335085_101556994	3300032770	Soil	MTNLAGLARYALAAQGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFVRWPLDRRFWKLLAMLGIAVGAARASARDNQARVVAWDARTRERQMKAISARAARAAKRT
Ga0335082_106959951	3300032782	Soil	MTNLAGLARYALAAQGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFVRWPLDRRFWKLLAMLGIAVGAARASARDNQARVVAWDARTRERQMKAITA
Ga0335079_102410821	3300032783	Soil	TQRPAGPGQPARPSPAAGRRKHVIRTLLIAWLVRWPLDRRFWHAVVLLGIALGAARASARDNQARVVAWDTRQRQRQMKALAARASRAARRA
Ga0335079_102850773	3300032783	Soil	MSYLTGLTRFAVAAQGTQMSAGPGQPARPDPVAGRRKHVTRTIILAWIVRWPFDRRFWHAVAMLGIAVGAARASGRDSRARMVAWDIRQRERQMKAMAARAARTGHRT
Ga0335079_108736052	3300032783	Soil	MSYLTGLARFSLAAPGTQMSAGPGQPARPDPTASRRKRVARGIILAWLLRWPLDRRFWHLVAMLVIALGAARASGRDSRARMVAWDIKQRERQMKAMAHRAARSARRA
Ga0335078_100984575	3300032805	Soil	MTYLAGLAQTAQGTQRPAGPGQPARPSPAAGRRKHVIRTLLIAWLVRWPLDRRFWHAVVLLGIALGAARASARDNQARVVAWDTRQRQRQMKALAARASRAARRA
Ga0335081_112387672	3300032892	Soil	MSYLTGLARFSLAAPGTQMSAGPGQPARPDPTASRRKRVARGIILAWLLRWPLDRRFWHTMAILGIAVAAARASGRDSRARMVAWDIRQRERQMKAMAHRTARAARRA
Ga0335081_113948302	3300032892	Soil	MTYLAGLAQTAQGTQRPAGPGQPARPSPAAGRRKHVIRTLLIAWLVRWPLDRRFWHAVVLLGIALGAARASARDNQARVVAWDTRQRQRQMKALAARASRAAR
Ga0335083_101809521	3300032954	Soil	LAGLTRYALAAQGTQMAAGPRQPSRPDPTASRRKRVARGIILAWFARWPFDRRFWHAMALLAIAVGAARASGRDSRARMVAWDIRQRERHTKAVAARGGRAARRA
Ga0335077_1000422415	3300033158	Soil	MTYLAGLAQTAQGTQRPADPGQPARPSPAAGRRKHVIRTLLIAWLVRWPLDRRFWHAVVLLGIALGAARASARDNQARVVAWDTRQRQRQMKALAARASRAARRA
Ga0335077_102431814	3300033158	Soil	MSYLTGLARFSLAAPGTQMSAGPGQPARPDPTASRRKRVARGILLAWLLRWPLDRRFWHTMAVFGIALAAARASGRDSRARMVAWDIRQRERQTKAMAHRAARTARRA
Ga0335077_104006541	3300033158	Soil	MSYLTGLARFTALSAQGTQMSAGPSQAARPDPTASRRKRVARGIILAWLLRWPLDRRFWHLVAMLVIALGAARASGRDSRARMVAWDIKQRERQMKAMAHRAA
Ga0335077_109003452	3300033158	Soil	SYLTGLARFTALSAQGTQMSAGPSQAARPDPTASRRKRVARGIILAWLLRWPLDRRFWHLVAMLVIALGAARASGRDSRARMVAWDIKQRERQMKAMAHRAARSARRA
Ga0314862_0088879_6_335	3300033803	Peatland	MSYLTGLARFTALSAQGTQMSAGPSQAARPDPTASRRKRVARGVILAWFLRWPLDRRFWHLVAMLAIALGAARASGRDSRARMVAWDIRQRERQMKAMAHRATRTARRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095850

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences