Metagenome Family F095789

Basic Information
Family ID	F095789
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	49 residues
Representative Sequence	MQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS
Number of Associated Samples	85
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (50.476 % of family members)
Environment Ontology (ENVO)	Unclassified (51.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.952 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 34.67% Coil/Unstructured: 65.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF11994	DUF3489	16.19
PF07519	Tannase	1.90
PF01408	GFO_IDH_MocA	1.90
PF13676	TIR_2	0.95
PF13620	CarboxypepD_reg	0.95
PF13546	DDE_5	0.95
PF01797	Y1_Tnp	0.95
PF05717	TnpB_IS66	0.95
PF01344	Kelch_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.95
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.95

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.29%
Host-Associated	Host-Associated	5.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.43%
Plants	Host-Associated → Plants	5.71%
Aquatic	Environmental → Aquatic	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%
Sediment	Environmental → Aquatic → Sediment	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.95%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.95%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	50.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_102426223	3300001593	Forest Soil	MQVETKFLRLCQPAALGEQIDGWKVYWVGGWGRDRLFFYVMVARVKS*
JGI25617J43924_101363783	3300002914	Grasslands Soil	MDVCGGAQTMQVETKFLRLCQPAALGEQIDGWKVYWVGGWGKDRLFYYVMVARVKR*
Ga0062389_1024471831	3300004092	Bog Forest Soil	MQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKNRRFYYVMVERVKS*
Ga0066675_111340621	3300005187	Soil	MAVETKFLRLYQPATLGEQIDGWKVCWLGGWGKDRLFYWVMVIRVKS*
Ga0065705_101540251	3300005294	Switchgrass Rhizosphere	MQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARGKCCKYDL*
Ga0070690_1013472972	3300005330	Switchgrass Rhizosphere	MDVSGADRPMQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0066388_1009543812	3300005332	Tropical Forest Soil	MEVETKYLRLCQPAALGDYIDGWKVHWVGGWGKNQLFFYVMVARVRS*
Ga0068868_1019835401	3300005338	Miscanthus Rhizosphere	MQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKSRY*
Ga0070691_107606832	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MCVWSGQTMQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0070694_1010415482	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0066702_104112503	3300005575	Soil	RLYQPATLGEQIDGWRVCWLGGWGKGRLFYWVMVTRVKS*
Ga0068861_1013508702	3300005719	Switchgrass Rhizosphere	GQTMQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0068860_1013231532	3300005843	Switchgrass Rhizosphere	MRLETKFLRLRQSVGLGEYIAGWEVCWLGGWDKNGLFYWVMVVRSEGGRGHPVMP*
Ga0080026_101491621	3300005952	Permafrost Soil	RLRQEAKLGAEIEGWRVCWLGGWGRGRLRFYVMVFRIGRPDR*
Ga0066656_107637022	3300006034	Soil	MPLETKFLRLYQPATLGEQIDGWRVCWLGGWGKGRLFYWVMVTRVKS*
Ga0070765_1009068692	3300006176	Soil	MEVETKYLRLCQPAALGDVIDGWKVHWVGGWGKNKLFFYVMVARVKS*
Ga0068865_1009872661	3300006881	Miscanthus Rhizosphere	MEVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0073928_111518971	3300006893	Iron-Sulfur Acid Spring	MQLETKFLRLRQSVKLGDEIAGWRVCWLGGWGRGSLRFYVMVFRIGGTDR*
Ga0099791_102529912	3300007255	Vadose Zone Soil	MQVETKFLRLCQPIKLGEEIDGWQVCWLGGWGKNRLFYYVMVARVKG*
Ga0099794_104757152	3300007265	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWRVCWLGGWGKGRLFYWVMVTRVKT*
Ga0099794_105687561	3300007265	Vadose Zone Soil	MPVETKFLRLCQPATLGEQIDGWRVCWLGGWGKDRLFYWVMVTRVKS*
Ga0099795_101168442	3300007788	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWRVCWLGGWGKGRLFYWVMVTRVKS*
Ga0066710_1047972321	3300009012	Grasslands Soil	MAVETKFLRLYQPATLGEQIDGWRVCWLGGWGKGRLFY
Ga0099829_115037311	3300009038	Vadose Zone Soil	MDVTGAIMQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPER*
Ga0099830_101662992	3300009088	Vadose Zone Soil	MDVSGAIMQLETKFLRLRQEVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPER*
Ga0099830_105931222	3300009088	Vadose Zone Soil	MQVETKFLRLCQPIALGEEIDGWQVCWLGGWGKNRLFYYVMVARMKGQTRFAKS*
Ga0099830_111084241	3300009088	Vadose Zone Soil	MAVETKFLRLGQPATLGEQIDGWRVCWLGGWGKDRLFYWVMVSRVKS*
Ga0099828_117149771	3300009089	Vadose Zone Soil	MDVTGDILQLETKLLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPER*
Ga0099827_108814542	3300009090	Vadose Zone Soil	MQVETKFLRLCQPIALGKKIDGWLVCWLGGWGKNRLFYYVMVARVKG*
Ga0099827_120046791	3300009090	Vadose Zone Soil	MEVETKYLRLCQPAALGEQIDGWKVYWVGGWGRDRLFFYVMVARVKS*
Ga0099792_102383612	3300009143	Vadose Zone Soil	MAVETKFLRLYQPATLGGQIDGWRVCWLGGWGKDRLFYWVMVSRVKS*
Ga0099792_105507871	3300009143	Vadose Zone Soil	LYQPATLGEQIDGWKVCWLGGWGKDRLFYWVMVTRVKS*
Ga0116218_12111931	3300009522	Peatlands Soil	VWRGQTLQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKNRRFYYVMVEKVKS*
Ga0116217_103348623	3300009700	Peatlands Soil	LCQPAVLGEQIDGWRVSWLGGWGKNRLFYYVMGSRVKS*
Ga0099796_100989381	3300010159	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWKVCWLGGWGKGRLFYWVMVTRVKS*
Ga0134063_100840312	3300010335	Grasslands Soil	MAVETKFLRLYQPATLGEQIDGWKVCWLGGWGKERLFYWVMVTRVKS*
Ga0134062_101712611	3300010337	Grasslands Soil	MSVETKFLRLYQPATLGEQIDGWRVCWLGGWGKDRLFYWVM
Ga0126370_118113741	3300010358	Tropical Forest Soil	VWSVTDMEVETKYLRLCQPAALGDYIDGWKVHWVGGWGKNKLFFYVMVARVKS*
Ga0126381_1020294501	3300010376	Tropical Forest Soil	VWSVTDMEVETKYLRLCQPAALGDYIDGWKVHWVGGWGKNQLFFYVMVARVRS*
Ga0136449_1009157183	3300010379	Peatlands Soil	MQVETKFLRLYQPAALGEQIDGWRVCWLGGWGKNRRFYYVMVERVKS*
Ga0136449_1025731252	3300010379	Peatlands Soil	MQVETKYLHLCQPAVLGEQIDGWRVSWLGGWGKNRLFYYVMVSRLKS*
Ga0134127_127811192	3300010399	Terrestrial Soil	DVSGADRPMQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0134122_119644602	3300010400	Terrestrial Soil	GADRPMQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0137392_101847161	3300011269	Vadose Zone Soil	KFLRLRQAVKLGEQIDGWRVCWLDGWSKGRLFYFVMVVRAGGPER*
Ga0137392_110335482	3300011269	Vadose Zone Soil	MDVTGAIMQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPDR*
Ga0137392_113037562	3300011269	Vadose Zone Soil	MPVETKFLRLYQPATLGEQIDGWKVCWLGGWGKGRLFYWVMVTR
Ga0137391_103916102	3300011270	Vadose Zone Soil	MEVETRYLRLCQPAAWGEVIDGWKVHWVGGWGKNKLFFYVLVARLNS*
Ga0137393_107016612	3300011271	Vadose Zone Soil	MEVETRYLRLCQPAAWGEVIDGWKVHWVGGWGKNKLFFYVLVARVNS*
Ga0137389_114535861	3300012096	Vadose Zone Soil	MQVETKFLRLCQPIELGKQIDGWQVCWLGGWGKNRLFYYVMVARVKG*
Ga0137389_117863632	3300012096	Vadose Zone Soil	MDVCVLAQTMQVETKFLRVCKPVQLGQEIGGWRVTWLGGWGKDRLFYYVMVVRVNDGTKPSLRQS
Ga0137388_114315721	3300012189	Vadose Zone Soil	MDVTGAIMQLETKFLRLREAMKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPER*
Ga0137382_104449492	3300012200	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWKVCWLGGWGKDRLFYWVMVTRVKS*
Ga0137399_102575312	3300012203	Vadose Zone Soil	MPVETKFLRLYQPATLGEQIDGWKVCWLGGWGKGRLFYWVMVTRVKN*
Ga0137399_109736501	3300012203	Vadose Zone Soil	MCVEGQTMQVETKFLRLCQPAALGEQVDGWKVYWVGGWGKDRLFYYVMVARVKS*
Ga0137376_104005031	3300012208	Vadose Zone Soil	MQVETKYLRLCQPAALGEQIDGWKVYWVGGWGRDRLFFYVMVAR
Ga0137376_112765841	3300012208	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWRVCWLGGWGKGRLFYWVMVTRVKN*
Ga0137376_116698312	3300012208	Vadose Zone Soil	MDVSGAIMQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVIRAGGPDG*
Ga0137378_104836712	3300012210	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIEGWRVCWLGGWGKGRLFYWVMVTRVKS*
Ga0137378_109658411	3300012210	Vadose Zone Soil	MQVETKYLRLCQPAALGEQIDGWKVYWVGGWGRDRLFFYVMVGQG*
Ga0137377_105524431	3300012211	Vadose Zone Soil	HGCVWSGQTMPLETKFLRLYQPANLGEQIDGWRVCWLGGWGKDRLFYWVMVTRVKN*
Ga0137386_101381192	3300012351	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWKVCWLGGWGKDRLFYWVMVSRVKS*
Ga0137386_105411991	3300012351	Vadose Zone Soil	MDVSGAIMQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPER*
Ga0137384_105142592	3300012357	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWRVSWLGGWGKGRLFYWVMVTRVKS*
Ga0137384_106051502	3300012357	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIEGWRVCWLGGWGKGRLFYWVMVTRLKS*
Ga0137384_108605161	3300012357	Vadose Zone Soil	MPLETKFLRLYQPANLGEQIDGWRVCWLGGWGKDRLFYWVMVTRVKS*
Ga0137368_104902661	3300012358	Vadose Zone Soil	LRLYQPATLGEQIDGWRVCWLGGWGKGRLFYWVMVTRVKS*
Ga0137368_104915182	3300012358	Vadose Zone Soil	MPVETKFLRLYQPATLGEQIDVWKVCWLGGWGKDRLFYWVMVTRVKS*
Ga0137360_117109141	3300012361	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWKVCWLGGWGKDRLFYWVM
Ga0137361_116078132	3300012362	Vadose Zone Soil	MDVSGAIMQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPDG*
Ga0137390_110126651	3300012363	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWRVCWLGGWGKDRLFYWVMVTRVK
Ga0137398_103444401	3300012683	Vadose Zone Soil	MQVETKYLRLCQPAALGEQIDGWKVYWVGGWGRDRLFFY
Ga0137396_103930282	3300012918	Vadose Zone Soil	MPVETKFLRLCQPATLGEQIDGWRVCWLGGWGKDRLFYWVMVARVKS*
Ga0137413_102384422	3300012924	Vadose Zone Soil	MAVETNFLRLYQPATLGQQIDGWRVCWLGGWGKDRLFYWVMVTRVKT*
Ga0137419_105956321	3300012925	Vadose Zone Soil	MQVETKFLRLCQPAALGEQIDGWKVYWVGGWGKDRLFYYVMVARVKS*
Ga0137419_109347082	3300012925	Vadose Zone Soil	MAVETKFLRLYQPASLGEQIDGWKVCWLGGWGKDRLFYWVMVTRVKS*
Ga0137416_116771952	3300012927	Vadose Zone Soil	MAVETKFLRLYQPATLGEQIDGWRVCWLGGWGKDRLFYWVMVSRVKS*
Ga0134110_103246071	3300012975	Grasslands Soil	RLYQPATLGEQIDGWKVCWLGGWGKGRLFYWVMVTRVKN*
Ga0157378_106450901	3300013297	Miscanthus Rhizosphere	MQVETKFLRLCQPAALGEQIDGWSVCWLGGWGKKRMFYYVMVARVKS*
Ga0163162_107190561	3300013306	Switchgrass Rhizosphere	TKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS*
Ga0137418_108922152	3300015241	Vadose Zone Soil	MAVETKFLRLYQPASLGEQIEGWKVCWLGGWGKGRLFYWVMVTRVKS*
Ga0137409_102295841	3300015245	Vadose Zone Soil	MAVETKFLRLGQPATLGEQIDGWRVCWLGGWGKGRLFYWVMVIRVKS*
Ga0134089_103387201	3300015358	Grasslands Soil	MDVTGAIMQLETKFLRLRQPVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPNR*
Ga0184623_102404113	3300018056	Groundwater Sediment	MQVETKFLQLSQPAAVGEQIDGWRVCWLGGWGKSRRFYYVMVARVKS
Ga0210403_110248381	3300020580	Soil	MEVETKYLRLCQPAALGELIDGWKVHWVGGWGKNKLFFYVMVARVKS
Ga0210399_114237801	3300020581	Soil	MQVETKFLRLCQPAALGEQIDGWKVYWVGGWGKDRLFYYVMVARVKR
Ga0179596_105828992	3300021086	Vadose Zone Soil	MQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYLVMVVRAGGPER
Ga0210405_102401844	3300021171	Soil	MEVETKYLRLCQPAALGDVIDGWKVHWVGGWGKNKLFFYVMVARVKS
Ga0210405_111541562	3300021171	Soil	MQVETKYLCLRQEIALGEEIDGWRVCWRGGWGRDRLFYFVMVARVKI
Ga0210397_114368322	3300021403	Soil	MQLETKFLRLSQEAKLGAEIEGWRVCWLGGWGRGRLRFYVMVFRIGGPDR
Ga0126371_135107861	3300021560	Tropical Forest Soil	VWSVTDMEVETKYLRLCQPAALGDYIDGWKVHWVGGWGKNQLFFYVMVARVRS
Ga0137417_14416653	3300024330	Vadose Zone Soil	MPVETKFLRLYKPASLGEQIDGWKVCWLGGWGKDRLFYWVMVTRVKT
Ga0207701_102949582	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKKRLFYYVMVARVKS
Ga0209155_11520171	3300026316	Soil	TKFLRLYQPATLGEQIDGWKVCWLGGWGKDRLFYWVMVIRVKS
Ga0209648_102143883	3300026551	Grasslands Soil	MDVCGGAQTMQVETKFLRLCQPAALGEQIDGWKVYWVGGWGKDRLFYYVMVARVKR
Ga0209648_103642491	3300026551	Grasslands Soil	MQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPER
Ga0209219_10471693	3300027565	Forest Soil	MQVETKFLRLCQPAALGEQIDGWKVYWVGGWGKDRLFYYVMVARVKS
Ga0209220_11527432	3300027587	Forest Soil	KFLRLCQPAALGEQIDGWKVYWVGGWGKDRLFYYVMVARVKR
Ga0209180_103797751	3300027846	Vadose Zone Soil	MEVETRYLRLCQPAAWGEVIDGWKVHWVGGWGKNKLFFYVLVARVNS
Ga0209701_102129001	3300027862	Vadose Zone Soil	MQLETKFLRLRQAVKLGEQIDGWRVCWLGGWSKGRLFYFVMVVRAGGPDG
Ga0209415_101457384	3300027905	Peatlands Soil	MQVETKFLRLCQPAALGEQIDGWRVCWLGGWGKNRRFYYVMVERVKS
Ga0209526_102499243	3300028047	Forest Soil	MDVCGGAQTMQVETKFLRLCQPAALGEQIDGWKVYWVGGWGKDRLFYYVMVARVKS
Ga0307468_1023278352	3300031740	Hardwood Forest Soil	AGKRDGCQWTGETMQVETKLLRLCHAVELGIEIDGWRVSWLGGWGKHRLFYLVMVMRVKG
Ga0307475_105192842	3300031754	Hardwood Forest Soil	MEVETKYLRLCQPAALGDVIDGWKVHWVGGWGKNKLFFYVMVARVKA
Ga0307479_107064081	3300031962	Hardwood Forest Soil	EVETKYLRLCRPAALGEVIDGWRVHWVGGWGKNKLFFYVMVARVKA
Ga0311301_121012161	3300032160	Peatlands Soil	MQVETKYLHLCQPAVLGEQIDGWRVSWLGGWGKNRLFYYVMGSRVKS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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