NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095747

Metagenome Family F095747

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095747
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 62 residues
Representative Sequence MTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Number of Associated Samples 75
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 15.24 %
% of genes near scaffold ends (potentially truncated) 31.43 %
% of genes from short scaffolds (< 2000 bps) 69.52 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (72.381 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(24.762 % of family members)
Environment Ontology (ENVO) Unclassified
(84.762 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.524 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 79.37%    β-sheet: 0.00%    Coil/Unstructured: 20.63%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF08299Bac_DnaA_C 46.67
PF027395_3_exonuc_N 10.48
PF04466Terminase_3 8.57
PF00145DNA_methylase 3.81
PF02195ParBc 1.90
PF08291Peptidase_M15_3 0.95
PF04404ERF 0.95
PF12518DUF3721 0.95
PF10145PhageMin_Tail 0.95
PF04542Sigma70_r2 0.95
PF04860Phage_portal 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 46.67
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 10.48
COG1783Phage terminase large subunitMobilome: prophages, transposons [X] 8.57
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 3.81
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.95
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.95
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.95
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A72.38 %
All OrganismsrootAll Organisms27.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10009458Not Available6395Open in IMG/M
3300000101|DelMOSum2010_c10107997Not Available1132Open in IMG/M
3300000115|DelMOSum2011_c10209788Not Available538Open in IMG/M
3300000116|DelMOSpr2010_c10057278All Organisms → Viruses → Predicted Viral1661Open in IMG/M
3300001349|JGI20160J14292_10137455Not Available788Open in IMG/M
3300001589|JGI24005J15628_10013659All Organisms → cellular organisms → Bacteria3651Open in IMG/M
3300002488|JGI25128J35275_1000069All Organisms → Viruses28593Open in IMG/M
3300002488|JGI25128J35275_1066825All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300002930|Water_100145All Organisms → cellular organisms → Bacteria → Proteobacteria16555Open in IMG/M
3300002930|Water_101092All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium5283Open in IMG/M
3300004097|Ga0055584_102566973Not Available513Open in IMG/M
3300004457|Ga0066224_1055723Not Available849Open in IMG/M
3300006029|Ga0075466_1080960Not Available905Open in IMG/M
3300006190|Ga0075446_10017911Not Available2400Open in IMG/M
3300006191|Ga0075447_10020200Not Available2650Open in IMG/M
3300006191|Ga0075447_10249753All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage575Open in IMG/M
3300006803|Ga0075467_10136949All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300006919|Ga0070746_10136050Not Available1205Open in IMG/M
3300006947|Ga0075444_10414820Not Available504Open in IMG/M
3300007229|Ga0075468_10065007Not Available1208Open in IMG/M
3300007229|Ga0075468_10235247Not Available523Open in IMG/M
3300007229|Ga0075468_10248140Not Available505Open in IMG/M
3300007540|Ga0099847_1180643Not Available620Open in IMG/M
3300007540|Ga0099847_1255722Not Available502Open in IMG/M
3300007542|Ga0099846_1017036All Organisms → Viruses → Predicted Viral2838Open in IMG/M
3300007640|Ga0070751_1281633Not Available624Open in IMG/M
3300008221|Ga0114916_1005242Not Available5843Open in IMG/M
3300009071|Ga0115566_10318198Not Available914Open in IMG/M
3300009071|Ga0115566_10390133All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage804Open in IMG/M
3300009076|Ga0115550_1002799Not Available11742Open in IMG/M
3300009076|Ga0115550_1260911Not Available565Open in IMG/M
3300009077|Ga0115552_1086137All Organisms → Viruses → Predicted Viral1375Open in IMG/M
3300009077|Ga0115552_1418505Not Available528Open in IMG/M
3300009172|Ga0114995_10391004Not Available763Open in IMG/M
3300009193|Ga0115551_1519290Not Available507Open in IMG/M
3300009420|Ga0114994_10075304All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2306Open in IMG/M
3300009428|Ga0114915_1099809Not Available865Open in IMG/M
3300009495|Ga0115571_1342188Not Available591Open in IMG/M
3300009496|Ga0115570_10199187Not Available906Open in IMG/M
3300009496|Ga0115570_10485120Not Available517Open in IMG/M
3300009512|Ga0115003_10132735All Organisms → Viruses → Predicted Viral1518Open in IMG/M
3300009593|Ga0115011_10298455Not Available1224Open in IMG/M
3300009785|Ga0115001_10917095All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage526Open in IMG/M
3300010316|Ga0136655_1120836Not Available786Open in IMG/M
3300010368|Ga0129324_10148141Not Available980Open in IMG/M
3300010368|Ga0129324_10294310Not Available639Open in IMG/M
3300010392|Ga0118731_111024070All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300010883|Ga0133547_10518642Not Available2403Open in IMG/M
3300011118|Ga0114922_11221379Not Available607Open in IMG/M
3300012919|Ga0160422_10472177Not Available787Open in IMG/M
3300013010|Ga0129327_10019894All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides → Parabacteroides goldsteinii3549Open in IMG/M
3300017697|Ga0180120_10378181Not Available558Open in IMG/M
3300017697|Ga0180120_10452467Not Available501Open in IMG/M
3300017720|Ga0181383_1018484Not Available1871Open in IMG/M
3300017748|Ga0181393_1003674Not Available5130Open in IMG/M
3300017768|Ga0187220_1023035Not Available1874Open in IMG/M
3300020166|Ga0206128_1051695All Organisms → Viruses → Predicted Viral1995Open in IMG/M
3300020185|Ga0206131_10003521Not Available17948Open in IMG/M
3300020185|Ga0206131_10024264All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4825Open in IMG/M
3300020438|Ga0211576_10678257Not Available506Open in IMG/M
3300021375|Ga0213869_10008343Not Available6345Open in IMG/M
3300021375|Ga0213869_10021383All Organisms → cellular organisms → Bacteria3652Open in IMG/M
3300021375|Ga0213869_10221678Not Available841Open in IMG/M
3300022053|Ga0212030_1026571Not Available795Open in IMG/M
3300022053|Ga0212030_1037385Not Available681Open in IMG/M
3300022061|Ga0212023_1008598Not Available1281Open in IMG/M
3300022072|Ga0196889_1035720Not Available994Open in IMG/M
3300022072|Ga0196889_1105251Not Available511Open in IMG/M
3300022178|Ga0196887_1090195Not Available701Open in IMG/M
3300022178|Ga0196887_1132307Not Available525Open in IMG/M
(restricted) 3300024059|Ga0255040_10061175All Organisms → Viruses → Predicted Viral1409Open in IMG/M
(restricted) 3300024062|Ga0255039_10502791Not Available529Open in IMG/M
3300025127|Ga0209348_1019417Not Available2562Open in IMG/M
3300025132|Ga0209232_1000521Not Available23351Open in IMG/M
3300025266|Ga0208032_1002283Not Available7642Open in IMG/M
3300025508|Ga0208148_1000519Not Available14842Open in IMG/M
3300025508|Ga0208148_1044867Not Available1119Open in IMG/M
3300025508|Ga0208148_1048565Not Available1058Open in IMG/M
3300025543|Ga0208303_1010567Not Available2868Open in IMG/M
3300025543|Ga0208303_1013491All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2458Open in IMG/M
3300025543|Ga0208303_1061991Not Available875Open in IMG/M
3300025543|Ga0208303_1088409Not Available674Open in IMG/M
3300025620|Ga0209405_1001979Not Available13929Open in IMG/M
3300025620|Ga0209405_1015000All Organisms → Viruses → Predicted Viral3464Open in IMG/M
3300025626|Ga0209716_1001424Not Available18059Open in IMG/M
3300025626|Ga0209716_1029075All Organisms → Viruses → Predicted Viral2075Open in IMG/M
3300025626|Ga0209716_1187193Not Available508Open in IMG/M
3300025645|Ga0208643_1010433All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides → Parabacteroides goldsteinii3581Open in IMG/M
3300025806|Ga0208545_1159812Not Available531Open in IMG/M
3300025809|Ga0209199_1076076All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1489Open in IMG/M
3300025809|Ga0209199_1082735All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1392Open in IMG/M
3300025849|Ga0209603_1073304All Organisms → Viruses → Predicted Viral1651Open in IMG/M
3300025886|Ga0209632_10336142Not Available740Open in IMG/M
3300027522|Ga0209384_1098266Not Available700Open in IMG/M
3300027668|Ga0209482_1065823Not Available1259Open in IMG/M
3300027672|Ga0209383_1000442Not Available29709Open in IMG/M
3300027813|Ga0209090_10039199Not Available2696Open in IMG/M
3300027906|Ga0209404_10230350Not Available1160Open in IMG/M
(restricted) 3300027996|Ga0233413_10379558Not Available616Open in IMG/M
3300028125|Ga0256368_1026012Not Available1041Open in IMG/M
3300031519|Ga0307488_10183299All Organisms → Viruses → Predicted Viral1434Open in IMG/M
3300031519|Ga0307488_10532367All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage695Open in IMG/M
3300031519|Ga0307488_10598530Not Available640Open in IMG/M
3300031658|Ga0307984_1080333Not Available970Open in IMG/M
3300032047|Ga0315330_10006142Not Available8174Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous24.76%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine17.14%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine12.38%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.62%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.71%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.76%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.81%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean2.86%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.86%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine2.86%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.86%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine2.86%
Estuary WaterEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water1.90%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.95%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.95%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.95%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.95%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.95%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.95%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002488Marine viral communities from the Pacific Ocean - ETNP_2_60EnvironmentalOpen in IMG/M
3300002930Estuary water microbial communities from Pearl Estuary, Zhujiang, ChinaEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004457Marine viral communities from Newfoundland, Canada MC-1EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009076Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025266Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025620Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025809Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1000945893300000101MarineMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
DelMOSum2010_1010799733300000101MarineMTEXEKNASDXAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
DelMOSum2011_1020978813300000115MarineSDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLS*
DelMOSpr2010_1005727863300000116MarineMTEKEKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
JGI20160J14292_1013745523300001349Pelagic MarineMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYRYQIEFWTEVKRYLS*
JGI24005J15628_1001365933300001589MarineMTDREKNANDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK*
JGI25128J35275_1000069163300002488MarineMTDREKEANDKAQKLISRFIRECDVDEDSAKKGSLILIDELFKWGLPYKYQIEFWTDVKRYLK*
JGI25128J35275_106682513300002488MarineMTDREKNASDQAQKLISRFISECNVDEDSAKKASLILIDELFKWGLPYKYQIEFWTEVKRYLK*
Water_100145153300002930Estuary WaterMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYKYQIEFWTEVKRYLK*
Water_10109223300002930Estuary WaterMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK*
Ga0055584_10256697313300004097Pelagic MarineMTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0066224_105572343300004457MarineMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEMFKWGLPYRYQIEFWTEVKRYLK*
Ga0075466_108096033300006029AqueousMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLS*
Ga0075446_1001791133300006190MarineMTEKEKNASNKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0075447_1002020013300006191MarineMTEKEKNASNKAQQLISRHISECGIDEYASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0075447_1024975323300006191MarineMTEKEKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0075467_1013694953300006803AqueousMTEKEKNASDKAQKLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLS*
Ga0070746_1013605053300006919AqueousASDQAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0075444_1041482023300006947MarineMTEKEKNASDKAQQLISRHISECGIDEDSAKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0075468_1006500713300007229AqueousKKKKMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0075468_1023524713300007229AqueousDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0075468_1024814013300007229AqueousMTEREKNASDKAQQLISRHISECGIDEDSSKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0099847_118064313300007540AqueousMTDKEKNASDQAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYRYQIEFWTEVKRYLK*
Ga0099847_125572223300007540AqueousLKKKKMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0099846_101703673300007542AqueousDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0070751_128163313300007640AqueousMTEREKNASDQAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0114916_100524263300008221Deep OceanMTDKEKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0115566_1031819823300009071Pelagic MarineMTEREKNASNKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0115566_1039013323300009071Pelagic MarineMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYRYQIEFWTEVKRYLK*
Ga0115550_1002799163300009076Pelagic MarineMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEMFKWALPYRYQIEFWTEVKRYLK*
Ga0115550_126091133300009076Pelagic MarineMTEREKNASDKAQQLISRHIRECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0115552_108613743300009077Pelagic MarineMTEREKNASDKAQQLISRHIRECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYL
Ga0115552_141850523300009077Pelagic MarineMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYRYQVEFWKEVKRYLK*
Ga0114995_1039100443300009172MarineMTEKEKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQVEFWT
Ga0115551_151929023300009193Pelagic MarineMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYL
Ga0114994_1007530443300009420MarineMTEREKNASDQAQKLISRYISECSVDEDSAKKGVLILIDELFKWGLPYRYQIEFWTEVKRYLK*
Ga0114915_109980923300009428Deep OceanMTENEKNASDKAQQLISRHISECGIDEDSAKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0115571_134218813300009495Pelagic MarineKKKKMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYRYQIEFWTEVKRYLS*
Ga0115570_1019918743300009496Pelagic MarineMTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRY*
Ga0115570_1048512023300009496Pelagic MarineMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYRYQIE
Ga0115003_1013273533300009512MarineMTEKEKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQVEFWTEVKRYLK*
Ga0115011_1029845533300009593MarineMTEREKNASDKAQKLISRYISECNIDEESAKKGSLILIDELFKWGLPYKYQIEFWTEVKRYLK*
Ga0115001_1091709533300009785MarineMTDREKNASDQAQKLISRYIRECGVDEDSAKKGVLILVDEIFKWGLPYTYQIEFWTEVKRYLK*
Ga0136655_112083633300010316Freshwater To Marine Saline GradientMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK*
Ga0129324_1014814143300010368Freshwater To Marine Saline GradientEKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK*
Ga0129324_1029431013300010368Freshwater To Marine Saline GradientEKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYTYQIEFWTEVKRYLK*
Ga0118731_11102407033300010392MarineMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWT
Ga0133547_1051864283300010883MarineMTEKEKRAHDKAQKLISRFISECDVDEDAAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK*
Ga0114922_1122137913300011118Deep SubsurfaceMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYTYQIEFWTEVKRYLK*
Ga0160422_1047217713300012919SeawaterMTDREKEASDKAQKLISRFISECDVDEDSAKKASLILIDELFKWGLPYKYQIECWTDVKRYLK*
Ga0129327_1001989483300013010Freshwater To Marine Saline GradientDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLS*
Ga0180120_1037818113300017697Freshwater To Marine Saline GradientEKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK
Ga0180120_1045246713300017697Freshwater To Marine Saline GradientKEKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYRYQIEFWTEVKRYLK
Ga0181383_101848463300017720SeawaterMTDREKNASDKAQKLISRFISECNVDEDSAKKASLILIDELFKWGLPYKYQIEFWTEVKRYLK
Ga0181393_100367493300017748SeawaterMTDREKNANDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK
Ga0187220_102303563300017768SeawaterMTDREKNASDKAQKLISRFISECDVDEDSAKKASLILIDELFKWGLPYKYQIEFWTEVKRYLK
Ga0206128_105169543300020166SeawaterMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYRYQIEFWTEVKRYLK
Ga0206131_10003521153300020185SeawaterMTEREKNASDKAQQLISRHIRECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLS
Ga0206131_10024264103300020185SeawaterTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0211576_1067825723300020438MarineMTDREKNASDQAQKLISRYISECSVDEDSAKKGVLILVDEIFKWGLPYKYQIEFWTEVKRYLK
Ga0213869_1000834323300021375SeawaterMTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0213869_1002138383300021375SeawaterMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK
Ga0213869_1022167813300021375SeawaterMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWTEVKRYLK
Ga0212030_102657133300022053AqueousMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLS
Ga0212030_103738523300022053AqueousMTEKEKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0212023_100859833300022061AqueousMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYRYQIEFWTEVKRYLK
Ga0196889_103572013300022072AqueousREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0196889_110525113300022072AqueousREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYTYQIEFWTEVKRYLK
Ga0196887_109019513300022178AqueousMTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEV
Ga0196887_113230723300022178AqueousMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYNYQIEFWTEVKRYLS
(restricted) Ga0255040_1006117553300024059SeawaterMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYRYQIEFWTEVKRYL
(restricted) Ga0255039_1050279123300024062SeawaterMTDREKNANDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYRYQIEFWTEVKRYLK
Ga0209348_101941753300025127MarineMTDREKEANDKAQKLISRFIRECDVDEDSAKKGSLILIDELFKWGLPYKYQIEFWTDVKRYLK
Ga0209232_1000521163300025132MarineMTDREKNASDQAQKLISRFISECNVDEDSAKKASLILIDELFKWGLPYKYQIEFWTEVKRYLK
Ga0208032_100228383300025266Deep OceanMTDKEKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0208148_1000519143300025508AqueousMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0208148_104486743300025508AqueousMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYTYQIEFWTEVKRYLK
Ga0208148_104856513300025508AqueousMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIE
Ga0208303_101056713300025543AqueousMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYRYQIEFWT
Ga0208303_101349123300025543AqueousMTEREKNASDQAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0208303_106199133300025543AqueousMTDKEKNASDQAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYRYQIEFWTEVKRYLK
Ga0208303_108840923300025543AqueousMTDKEKNASDQAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0209405_1001979273300025620Pelagic MarineMTEREKNASDKAQQLISRHIRECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0209405_101500073300025620Pelagic MarineMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDEIFKWGLPYRYQVEFWKEVKRYLK
Ga0209716_1001424233300025626Pelagic MarineMTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYKYQIEFWTEVKRYLK
Ga0209716_102907533300025626Pelagic MarineMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYRYQIEFWTEVKRYLS
Ga0209716_118719333300025626Pelagic MarineMTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWTEVK
Ga0208643_101043383300025645AqueousTMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLS
Ga0208545_115981213300025806AqueousMTEREKNASDKAQQLISRHISECGIDEDSSKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0209199_107607653300025809Pelagic MarineMTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEFWT
Ga0209199_108273513300025809Pelagic MarineMTEREKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQIEF
Ga0209603_107330463300025849Pelagic MarineMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWT
Ga0209632_1033614213300025886Pelagic MarineMTEREKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYRYQIEF
Ga0209384_109826623300027522MarineMTEKEKNASNKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0209482_106582343300027668MarineMTEKEKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0209383_1000442193300027672MarineMTEKEKNASNKAQQLISRHISECGIDEYASKKASLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0209090_1003919973300027813MarineMTEREKNASDQAQKLISRYISECSVDEDSAKKGVLILIDELFKWGLPYRYQIEFWTEVKRYLK
Ga0209404_1023035023300027906MarineMTEREKNASDKAQKLISRYISECNIDEESAKKGSLILIDELFKWGLPYKYQIEFWTEVKRYLK
(restricted) Ga0233413_1037955833300027996SeawaterTDREKNASDQAQKLISRYISECGVDEDSAKKGVLILVDEIFKWGLPYKYQIEFWTEVKRYLK
Ga0256368_102601233300028125Sea-Ice BrineMQEKKRNNRYKIMTEKEKRAHDKAQKLISRFISECDVDEDAAKKAGLILIDELFKWGLPYTYQIEFWTEVKRYLK
Ga0307488_1018329943300031519Sackhole BrineMTEREKNASDQAQKLISRYISECGVDEDSAKKGVLILIDELFKWGLPYRYQIEFWTEVKRYLK
Ga0307488_1053236723300031519Sackhole BrineMTEKEKNASDKAQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQVEFWTEVKRYLK
Ga0307488_1059853013300031519Sackhole BrineQKLISRFISECEVDEDSAKKAGLILIDELFKWGLPYTYQVEFWTEVKRYLK
Ga0307984_108033333300031658MarineMTDKEKNASDKAQQLISRHISECGIDEDASKKASLILIDELFKWGLPYTYQIEFWKEVKRYLK
Ga0315330_1000614233300032047SeawaterMIDRDKEASDKAQKLISRFISECNVDEDSAKKASLILIDELFKWGLPYKYQIEFWTDVKRYLK


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