Metagenome Family F095641

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095641
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	93 residues
Representative Sequence	VAKTGEKLAGASATSKFPFSTALPGVSSGFVDVYEEYVPRLVPRGPRSVSKRGRTDGSSSGLPASKKSRKPSTLPGTPVVASMLLGEHI
Number of Associated Samples	57
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	45.71 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (92.381 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (93.333 % of family members)
Environment Ontology (ENVO)	Unclassified (93.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (93.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.42% β-sheet: 0.00% Coil/Unstructured: 96.58%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04195	Transposase_28	3.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
All Organisms	root	All Organisms	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
cellular organisms	root	All Organisms → cellular organisms	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	6.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Panicodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae	3.81 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Paniceae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae	3.81 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Saccharinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae	2.86 %
Panicinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae	2.86 %
Cenchrinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Miscanthus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus	2.86 %
Panicum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum	2.86 %
Setaria	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae → Setaria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Miscanthus lutarioriparius	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	2.86 %
Panicum sect. Hiantes	section	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes	2.86 %
Setaria viridis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae → Setaria → Setaria viridis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.38 %
Panicum virgatum	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2.86 %
Miscanthus lutarioriparius	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	2.86 %
Setaria viridis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae → Setaria → Setaria viridis	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006237\|Ga0097621_101534381	Not Available	632	Open in IMG/M
3300011119\|Ga0105246_11773447	Not Available	589	Open in IMG/M
3300013297\|Ga0157378_11704535	Not Available	677	Open in IMG/M
3300013297\|Ga0157378_12588257	Not Available	560	Open in IMG/M
3300015269\|Ga0182113_1050994	Not Available	613	Open in IMG/M
3300015275\|Ga0182172_1006374	Not Available	993	Open in IMG/M
3300015275\|Ga0182172_1032510	Not Available	644	Open in IMG/M
3300015276\|Ga0182170_1077981	Not Available	500	Open in IMG/M
3300015277\|Ga0182128_1006576	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	996	Open in IMG/M
3300015277\|Ga0182128_1032813	Not Available	649	Open in IMG/M
3300015279\|Ga0182174_1017974	Not Available	784	Open in IMG/M
3300015281\|Ga0182160_1015109	Not Available	810	Open in IMG/M
3300015285\|Ga0182186_1061658	Not Available	550	Open in IMG/M
3300015286\|Ga0182176_1016864	Not Available	839	Open in IMG/M
3300015287\|Ga0182171_1067829	Not Available	545	Open in IMG/M
3300015289\|Ga0182138_1007968	Not Available	985	Open in IMG/M
3300015289\|Ga0182138_1017076	Not Available	801	Open in IMG/M
3300015291\|Ga0182125_1046285	Not Available	622	Open in IMG/M
3300015294\|Ga0182126_1018772	Not Available	804	Open in IMG/M
3300015296\|Ga0182157_1022507	Not Available	784	Open in IMG/M
3300015298\|Ga0182106_1015146	Not Available	883	Open in IMG/M
3300015299\|Ga0182107_1014301	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae → Setaria → Setaria viridis	896	Open in IMG/M
3300015299\|Ga0182107_1015472	Not Available	877	Open in IMG/M
3300015299\|Ga0182107_1023729	Not Available	779	Open in IMG/M
3300015300\|Ga0182108_1021870	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	803	Open in IMG/M
3300015302\|Ga0182143_1013375	Not Available	909	Open in IMG/M
3300015302\|Ga0182143_1030958	Not Available	720	Open in IMG/M
3300015302\|Ga0182143_1037715	Not Available	682	Open in IMG/M
3300015303\|Ga0182123_1008478	Not Available	989	Open in IMG/M
3300015303\|Ga0182123_1076775	Not Available	543	Open in IMG/M
3300015307\|Ga0182144_1055346	Not Available	618	Open in IMG/M
3300015308\|Ga0182142_1000758	Not Available	2103	Open in IMG/M
3300015308\|Ga0182142_1113506	Not Available	505	Open in IMG/M
3300015314\|Ga0182140_1079379	Not Available	567	Open in IMG/M
3300015322\|Ga0182110_1038405	Not Available	721	Open in IMG/M
3300015322\|Ga0182110_1119037	Not Available	510	Open in IMG/M
3300015323\|Ga0182129_1052126	Not Available	640	Open in IMG/M
3300015323\|Ga0182129_1101929	Not Available	524	Open in IMG/M
3300015341\|Ga0182187_1093255	Not Available	661	Open in IMG/M
3300015341\|Ga0182187_1150677	Not Available	558	Open in IMG/M
3300015341\|Ga0182187_1159050	Not Available	547	Open in IMG/M
3300015344\|Ga0182189_1159061	Not Available	578	Open in IMG/M
3300015346\|Ga0182139_1155986	Not Available	600	Open in IMG/M
3300015346\|Ga0182139_1235033	Not Available	511	Open in IMG/M
3300015346\|Ga0182139_1238218	Not Available	508	Open in IMG/M
3300015347\|Ga0182177_1026500	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	1142	Open in IMG/M
3300015351\|Ga0182161_1179307	Not Available	591	Open in IMG/M
3300017407\|Ga0182220_1001260	Not Available	1716	Open in IMG/M
3300017407\|Ga0182220_1037462	Not Available	676	Open in IMG/M
3300017409\|Ga0182204_1034189	Not Available	732	Open in IMG/M
3300017409\|Ga0182204_1036350	Not Available	719	Open in IMG/M
3300017410\|Ga0182207_1107312	Not Available	596	Open in IMG/M
3300017411\|Ga0182208_1089381	Not Available	566	Open in IMG/M
3300017411\|Ga0182208_1117233	Not Available	519	Open in IMG/M
3300017413\|Ga0182222_1053211	Not Available	605	Open in IMG/M
3300017413\|Ga0182222_1079499	Not Available	545	Open in IMG/M
3300017415\|Ga0182202_1043562	Not Available	725	Open in IMG/M
3300017415\|Ga0182202_1044635	Not Available	720	Open in IMG/M
3300017415\|Ga0182202_1079192	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	603	Open in IMG/M
3300017415\|Ga0182202_1127231	Not Available	517	Open in IMG/M
3300017420\|Ga0182228_1106023	Not Available	541	Open in IMG/M
3300017425\|Ga0182224_1039335	Not Available	788	Open in IMG/M
3300017425\|Ga0182224_1047794	Not Available	744	Open in IMG/M
3300017427\|Ga0182190_1007778	Not Available	1359	Open in IMG/M
3300017427\|Ga0182190_1056059	Not Available	726	Open in IMG/M
3300017427\|Ga0182190_1129760	Not Available	547	Open in IMG/M
3300017427\|Ga0182190_1159129	Not Available	508	Open in IMG/M
3300017430\|Ga0182192_1045702	Not Available	794	Open in IMG/M
3300017430\|Ga0182192_1131030	Not Available	555	Open in IMG/M
3300017433\|Ga0182206_1034812	Not Available	810	Open in IMG/M
3300017433\|Ga0182206_1119749	Not Available	551	Open in IMG/M
3300017433\|Ga0182206_1156240	Not Available	505	Open in IMG/M
3300017436\|Ga0182209_1081115	Not Available	643	Open in IMG/M
3300017436\|Ga0182209_1108832	Not Available	586	Open in IMG/M
3300017436\|Ga0182209_1138459	Not Available	542	Open in IMG/M
3300017438\|Ga0182191_1051814	Not Available	764	Open in IMG/M
3300017442\|Ga0182221_1027452	Not Available	875	Open in IMG/M
3300017442\|Ga0182221_1080324	Not Available	636	Open in IMG/M
3300017442\|Ga0182221_1086438	Not Available	621	Open in IMG/M
3300017442\|Ga0182221_1110277	Not Available	577	Open in IMG/M
3300017443\|Ga0182193_1004959	Not Available	1548	Open in IMG/M
3300017443\|Ga0182193_1087040	Not Available	666	Open in IMG/M
3300017680\|Ga0182233_1071043	Not Available	625	Open in IMG/M
3300017680\|Ga0182233_1075801	Not Available	607	Open in IMG/M
3300017681\|Ga0182226_1010973	Not Available	1604	Open in IMG/M
3300017681\|Ga0182226_1033943	Not Available	912	Open in IMG/M
3300017682\|Ga0182229_1023556	Not Available	1114	Open in IMG/M
3300017684\|Ga0182225_1013918	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	1052	Open in IMG/M
3300017684\|Ga0182225_1126978	Not Available	524	Open in IMG/M
3300017684\|Ga0182225_1144848	Not Available	502	Open in IMG/M
3300017685\|Ga0182227_1086238	Not Available	597	Open in IMG/M
3300017685\|Ga0182227_1131275	Not Available	509	Open in IMG/M
3300017686\|Ga0182205_1075166	Not Available	663	Open in IMG/M
3300017686\|Ga0182205_1120033	Not Available	568	Open in IMG/M
3300017686\|Ga0182205_1143893	Not Available	534	Open in IMG/M
3300017686\|Ga0182205_1148458	Not Available	528	Open in IMG/M
3300017689\|Ga0182231_1072266	Not Available	655	Open in IMG/M
3300017690\|Ga0182223_1026385	Not Available	767	Open in IMG/M
3300017690\|Ga0182223_1056247	Not Available	627	Open in IMG/M
3300017690\|Ga0182223_1086228	Not Available	557	Open in IMG/M
3300025942\|Ga0207689_10113372	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum	2229	Open in IMG/M
3300025942\|Ga0207689_11613375	Not Available	539	Open in IMG/M
3300026089\|Ga0207648_10120611	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	2305	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	93.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.86%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	93.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	93.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	93.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017681	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0097621_1015343811	3300006237	Miscanthus Rhizosphere	VAETGDKLAGTSATSKSPPSTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSSLPVSKKPRKPSTPSGTPVVASMLLGEHI*
Ga0105246_117734472	3300011119	Miscanthus Rhizosphere	ETGDRLAGTSTISKSEAFTALPGVSFRFVDVYEEYVPRLVPRGPRSVPKRGRMDGSSSGLPVSKKPRKPSTPSGTPVVASMLLGEHI*
Ga0157378_117045352	3300013297	Miscanthus Rhizosphere	VVNTGENLAGASVTSKFPITTVFPGVSSRFVDVYKEYVPRPVPRGPRSVSKRGRTDGSSSGLPASKKSCKPSTRPGTLVVASMLLGEHINTLCPFVFLFLS*
Ga0157378_125882571	3300013297	Miscanthus Rhizosphere	VTNTGEKLAGASATSKFPISTVFPRVSSGFVDVYEEYVPRLVPQGPRSVSKRGRMDGSSSGLPASKKSHKPSTPPGTPVVASMLL
Ga0182113_10509942	3300015269	Miscanthus Phyllosphere	VAETGDKLAGAPIISKFPTPTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKPRKPSTLSGTPVVASMLLGEHI*
Ga0182172_10063743	3300015275	Miscanthus Phyllosphere	MAKTREKLAGASATSKFPISTALPGVSSRFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI*
Ga0182172_10325101	3300015275	Miscanthus Phyllosphere	VKTGKELAVASATSKSPISTAFPRVSSGFVDVYEEYVPRLVPCGPHSVSKRGRTNGSSSGLPTSKKSRKPSTPLGTPVVA
Ga0182170_10779811	3300015276	Miscanthus Phyllosphere	VANTGKKLAGASATSKFPISIAFPGVSFGFVDVYEEYVPRLVPHGPRSVPKRGRTDGSSSSLPVSKKSHKPSTLPGTPVVASKLLGEHI*
Ga0182128_10065761	3300015277	Miscanthus Phyllosphere	MAETRDKLAGTSVTSKFPTSTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLSGTPVVASMLLGEHI*
Ga0182128_10328132	3300015277	Miscanthus Phyllosphere	MVNTGENLAGASVTSKFQITTVFPRVSSRVVDVYEAYVPRPVPRGPRSVSKRGRADGSSSGLPASKKSRQPSTHLGTPVIGSVLLGEHINMFGLSVICLCL*
Ga0182174_10179741	3300015279	Miscanthus Phyllosphere	MVNTREDLAGASVISKFQITTSFPGVSSVVLDVYEEYVPRPVPRGPHSVSKRGRTDGSSSGLPASKKPRKPSTHPGTPVVASMLLGEHINTLCPFVFLFLS*
Ga0182160_10151091	3300015281	Miscanthus Phyllosphere	LAKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI*
Ga0182186_10616581	3300015285	Miscanthus Phyllosphere	VVNTRENLAGASVTSKFPITTVFPRVSSRVVDVYEEYVPRPVPRGPRSVSKRGRADGSSSGLPISKKSHQPSTHPGTLVIGSVLLGEHINMFW
Ga0182176_10168643	3300015286	Miscanthus Phyllosphere	PIPLDVLPAFAKAGEKLAGAPTTSKFPFSKVLPGVSSGFIDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI*
Ga0182171_10678291	3300015287	Miscanthus Phyllosphere	VVNTRERLAGASVASKSPISTAFPRVSSGFVDVYEEYVPRLVPRGPHSVSKRGQMDGSSSSLPASKKSRKPSTPPGTPVVASMLLG
Ga0182138_10079682	3300015289	Miscanthus Phyllosphere	MAETGDKLAGTSITSKFPTSTALPGVSSEFVDVYEEYVPRLVPCGPRSVPKRGRTDGSSSGLPVSKKPHKPSTLSGTPVVASMLLGEHI*
Ga0182138_10170761	3300015289	Miscanthus Phyllosphere	LAGASTTSKFPFSIVLPRVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLLGTPVVASMLLGEHI*
Ga0182125_10462852	3300015291	Miscanthus Phyllosphere	VAETRDKLAGTSATSKSPTSTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKPRKPSTLSGTPVVASMLLGEH
Ga0182126_10187722	3300015294	Miscanthus Phyllosphere	MVNTGENLAGASVISKFQITTAFPGVSSGVVDVYEEYVPRLVPRGPHSVSKRGRADGSLSGLPTSKKSRQPSTRPGTPVVASMLLGEHINTLCPFVFLFLS*
Ga0182157_10225072	3300015296	Miscanthus Phyllosphere	VAKTGEKLAGASATSKFPFSTALNRVSSGFIDVYEEYVPRLVSRGPRSVPKRGRTDGSSSGLPASKKSRKPSTLLGTLVVASMLLGEHI*
Ga0182106_10151462	3300015298	Miscanthus Phyllosphere	VANTGEKLAGASATSKFPISTVFPGVSSGFIDVYEEYVPRLVPRGPRSVSKRGRTDGSSSGLPASKKSRKPSTRPGTPVVASMLLGEHINTLCPFVFLFLS*
Ga0182107_10143012	3300015299	Miscanthus Phyllosphere	VAETGDKLAGTSRTSKSPPSTALPGLSSRFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKPRKPSTPSGTLVVASMLLGERI*
Ga0182107_10154723	3300015299	Miscanthus Phyllosphere	NFVDPIPLDVLPVLAKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI*
Ga0182107_10237291	3300015299	Miscanthus Phyllosphere	VVNTRENLAGASVISKFQITTSFPGVSSGVVDVYEEYVPRPVPRGPHSVSKRGRADGSSSGLPASKKSRQPSTHPGTPVVASMLLGEHINTLCPFVFLFLS*
Ga0182108_10218702	3300015300	Miscanthus Phyllosphere	LGRNFVDPIPLDVLPAVVSTGENLAGASVTSKFPIAIVFPGVSSRFVDVYEEYVPRPVPRGPRSVPKRERTNGSSSGLPASKKSHKPSTRPGTPVVASMLLGEHI*
Ga0182143_10133752	3300015302	Miscanthus Phyllosphere	LAKAGEKLAGASATSKFPFSTVLPGVSSRFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI*
Ga0182143_10309581	3300015302	Miscanthus Phyllosphere	GENLARASIICKFQITTAFPGVSSGVVDVYEEYVPRLVPRGPHSVSKRGRADGSSSGLPASKKSRQPSTHPGTPVIGSVLLGEHINMFGLSVIYLCL*
Ga0182143_10377152	3300015302	Miscanthus Phyllosphere	MVNTGENLAGASITSKFPITTVFPGVSSRVVDVYEEYVPRPVPRGPRSVSKRGRADGSSSGLPASKKSRQPSTHPGTPVVASMLLGEHINTLCPFVFLFLS*
Ga0182123_10084783	3300015303	Miscanthus Phyllosphere	VLPTVVNPRENLVGASVTSKFPIAIVFPRVSSGFVDVYEEYVPRPVPRSPCSVSKRGQMDGSSSGLPASKKSRKPSTHLGTPVVASMLLGEHI*
Ga0182123_10767753	3300015303	Miscanthus Phyllosphere	EKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSHKPSTLLGTPVVASMLLGEHI*
Ga0182144_10553462	3300015307	Miscanthus Phyllosphere	VAKIGEKLAGASATSKFPISIALPGVSSGFVDVYEEYVPRLVPRGPRSVSKRGRTDGSSSGLPASKKSHKPSTPLGTLVVASMLLGEHIYTLCPFVFLFLS*
Ga0182142_10007582	3300015308	Miscanthus Phyllosphere	VFGHNFVDPIPLDVLPVLAKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLHVSKKSRKPSTLLGTPVVASMLLGEHI*
Ga0182142_11135061	3300015308	Miscanthus Phyllosphere	VVNTRENLAGASVTSKFPIATVFPRVSSRFVDVYEEYVPRLVPRGPRSVSKRGQTDGSSSGLPASKKSHKPSTHPGTPVVASMLLGEHINTLCPFV
Ga0182140_10793791	3300015314	Miscanthus Phyllosphere	VVKTRKELAVASTTSKSSISIAFPGVSSGFVDVYEEYVPRLVPRGPRSVSKRGRMDGSSSGLPASKKSHKPSTPPGTPVVASMLLG
Ga0182127_11122451	3300015321	Miscanthus Phyllosphere	SIVFPGVSSGFVDVYEEYVPHLVPHGPRSVSKRGRTDGSSPSLPASKKSRKPSTPPGTPVVASMLLGEHIYTLCPFVFLFLS*
Ga0182110_10384052	3300015322	Miscanthus Phyllosphere	VAKTGEKLAGASATSKFPFSTALPGVSSGFVDVYEEYVPRLVPYGPRSVPKRGRTDGSSSGLPASKKSRKPSTLPGTLVVAS
Ga0182110_11190371	3300015322	Miscanthus Phyllosphere	MVNTGENLAGASVTSKFPITIVFPRVSSGFVDVYEEYVPRPVPRGPRSISKRGRADGPSSGLPSSKKSRQPSTHPGTTVVASMLLGEHINT
Ga0182129_10521261	3300015323	Miscanthus Phyllosphere	MVNTRENLAGASVTSKFPITIVFPGVSFGVVDVYEEYVPRPVPRGPRSVSKRGRADGSSSGLPASKKSRQPSTHPGTPVVASMLLGEHINTLCPFVFLFLS*
Ga0182129_11019292	3300015323	Miscanthus Phyllosphere	VANIGEKLAGASATSKFPISTAFPGVSSGFVDVYEEYVSRLVPRGPHSVSKRGRTDESSSGLPASKKSRKPSTPPGTPVVASMLLGEHIYTLCPFVFLLLS*
Ga0182187_10932553	3300015341	Miscanthus Phyllosphere	RNFVDPIPLDVLPVLAKAGEKLAGASATSKFLFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLLGTPVVASMLLGEHI*
Ga0182187_11506771	3300015341	Miscanthus Phyllosphere	VVKTGEKLAGASATSKFPISTALPGVSSGFVDVYEEYVPRLVPRGPHSVSKRGRTDGSSSGLPASKKSRKPSTRPGTLVVASMLLGEHINTLCPFVFLFLS*
Ga0182187_11590501	3300015341	Miscanthus Phyllosphere	VAETGDRLVGTSAISKSQTSTALPGVSSGFADVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKPRKPSTLPGTPVVASMLLGEHI*
Ga0182189_11590611	3300015344	Miscanthus Phyllosphere	VAKTGEKLAGASTTSKFPFSTALPGVSSGFVDVYEEYVPRLVPHGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI*
Ga0182139_11559861	3300015346	Miscanthus Phyllosphere	VANTREKLARASATSKFPISTVFPRVSSGFVDVYEEYVPRLVPRGPHSVSKRGRTDGSSSSLPTSKKSRKPSTRPGTPVVASML
Ga0182139_12350332	3300015346	Miscanthus Phyllosphere	GRNFVDPIPLDVLPAVVNTGENLAGSSVTSKFPIAIVFPGVSSRFVDVYEEYVPRPVPRGPRSVPKRERTNGSSSGLPASKKSR*
Ga0182139_12382181	3300015346	Miscanthus Phyllosphere	PIPLDVLPVLAKAGEKLAEASATSKFPFSTVLPRVSFEFVDVYEEYVPHLVPRGPRSVPKRGQTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI*
Ga0182177_10265001	3300015347	Miscanthus Phyllosphere	LEKAREKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPHGPRSVPKRGQTDGSSSDLPVSKKSHKPSTLPGTPVVASMLLGEHI*
Ga0182161_11793071	3300015351	Miscanthus Phyllosphere	MVNTGENLAGASVTSKFPITIVFPRVSSGFVDVYEEYVPCLVPRGPRSVSKRGRADGSSSGLPASKKSHQLSTRPGTPVVASKLLGEHINTLCPFVILFLS*
Ga0182220_10012603	3300017407	Miscanthus Phyllosphere	LAKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSSLPISKKSHKPSTLPGTPVVASMLLGEHI
Ga0182220_10374621	3300017407	Miscanthus Phyllosphere	LGRNFVDPIPLDVLPTVVNTGENLAGASVTSKFLIATVFPRVSSGFVDVYEEYVPRLVPRGPRSVSKRGRTDGSSSSLPTSKKSRKPSTRPSTPVVASMLLGEHI
Ga0182204_10341891	3300017409	Miscanthus Phyllosphere	MIPLDVLPAVANTGEKLAGASATSKFPISTALPGVSSGFVDVYEEYVPRLVPRGPRSVSKRGRTDGSSSGLPASKKSRKPSTPPGTPVVASMLLGEHIHTLCPFVFLFLS
Ga0182204_10363502	3300017409	Miscanthus Phyllosphere	VVNTGENLAGASVTSKFPIAIMFPGVSSKFVDVYEEYVPRLVPQSPHSVSKRGRADGSSSSLPASKKSCQPSTRPGTPVVASMLLGEHINTLCPFVFLFLS
Ga0182207_11073121	3300017410	Miscanthus Phyllosphere	MANTRKELAGASATSKSPISTAFPGVSSGFVDVYEEYVPRLVPYGPRSVPKRGRMDGSSSSLPASKKSRKPSTLLGTPVVASMLLGEHI
Ga0182208_10893812	3300017411	Miscanthus Phyllosphere	VAETGDRLAGTSAISKSQTSTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRMDGSSSGLPVSKKPRKPSTPSGTPVVASMLLGE
Ga0182208_11172331	3300017411	Miscanthus Phyllosphere	VVNTREDLAGASVISKFQITTSFPGVSSGVVDVYEEYVPRPVPRGPHSISKRGRTDGSSSGLPASKKSRKPSTRPGTPVVAS
Ga0182222_10532111	3300017413	Miscanthus Phyllosphere	MVNTRENFAGASVTSKFPITTVFPRVSSRVVDVYEEYVPRPVPWGPHSVSKRGRADGSSSGLPSSKKSRQPSTRPGTPVVASMLLGEHINTLCPFVFL
Ga0182222_10794991	3300017413	Miscanthus Phyllosphere	MVNTGENLAGASVTSKFPITTVFSRVSFGVVDVYEEYVPRPVPQGPRSVPKRGRVDSSSSGLPSSKKSCQSSTPLGTQVIGSMLLGEHINMFGLSVIYLCL
Ga0182202_10435621	3300017415	Miscanthus Phyllosphere	MVNAGENLAGASITSKFPIATVFPRVSSGFVDVYEEYVPHPVPQGPHSVSKRGRTDGSSSGLPASKKSRQPSTHLGTPVVASMLLGEHINTLCPFAFLFLS
Ga0182202_10446352	3300017415	Miscanthus Phyllosphere	VANTGGKLAGASTTSKFPVSTVFPRVSSRFVDVYDEYVPCLVPRGPRSLSKRGRTDGSSSSLPAPTKSRKPSTRPGIPVVANMLLGEHI
Ga0182202_10791921	3300017415	Miscanthus Phyllosphere	VKTGEKLAGASATSKFPFSTALPGVSSRFVDVYEEYVPRLAPHGPHSVPKRGRTDGSSSGLPASKKSRKPSTLPGTLVVASML
Ga0182202_11272311	3300017415	Miscanthus Phyllosphere	VVNTGENLAGASVTSKFPITTVFPGVSSGVVDVYEEYVPRPVPRGPCSVSKRGQADGSSSSLPTSKKSRQPSTRPGTPVVASLLLGEH
Ga0182228_11060232	3300017420	Miscanthus Phyllosphere	ETRDRPAGTSAISKSQTSIALPGVSFGFVDVYEEYVPRIVPRGPRSIPKRGRTDGSSSGLPVPKKPRKPSTLSGTPVVASMFLGELI
Ga0182224_10393352	3300017425	Miscanthus Phyllosphere	FLAAADTGDRLAGTSAVSKSQTSAALPGVSSGFVDVYEEYVPCLVPRGPRSVQKRGRTDGSSSGLPVSKKPRKPSTLPGTPVVASMLLGEHI
Ga0182224_10477941	3300017425	Miscanthus Phyllosphere	VAKTRNELAVASATSKSPISTAFPGVSFGFVDVYEEYVPRLVPHGPRSVSKRGRTDGSSSGLPASKKSRKPSTPPGTPVVASMLLGEHIYTLCPF
Ga0182190_10077781	3300017427	Miscanthus Phyllosphere	LAKAREKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI
Ga0182190_10560591	3300017427	Miscanthus Phyllosphere	VAETGDKLAGASSTSKFPISTALPGVSSRFVDVYEEYVPRLVPRGPRSVPKRGQTDGSSSGLPASKKSRKPSTLPGTPVVASM
Ga0182190_11297601	3300017427	Miscanthus Phyllosphere	VVNTGENLVGASVTSKFPITIVFPRVSSRFFDVYEEYVPRLVPRGPHSVSKWGRADGSSSGLPSSKKSRQPSTRLGTLVVASMLLSEHINTLFPFVFLYLS
Ga0182190_11591291	3300017427	Miscanthus Phyllosphere	VAETGDRLAGTSAISKSQTSTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKPRKPST
Ga0182192_10457021	3300017430	Miscanthus Phyllosphere	VVKAGKELAVASATSKSPISTAFPRVSFGFVDVYEEYVPRLVPRGPRSVSKRGRTNGSSSGLPASKKSRKPSTPPDTPVVASMLLGEHIYTLCPFVFLFLS
Ga0182192_11310301	3300017430	Miscanthus Phyllosphere	LAKAGEKLDGASATSKFPFSIVLPGVSSGFVDVYEEYVPRLVPCGPRSVPKRGRTDGSSSSLPVSKKSRKPSTLPGTPVVASML
Ga0182206_10348123	3300017433	Miscanthus Phyllosphere	STGEKLARSSVTSKLQITTVFPRVSSGFVDVYEEYVPCLVPRGPRSVPKRGWVDGSSSGLPASKKSHQPSTHPGTPVIGSVLLGEHINMFGLSVIYLCR
Ga0182206_11197491	3300017433	Miscanthus Phyllosphere	VNTGEKLAGASIISKFETSTVFLGVSSGVVDVYEEYVPRPVPRGPRSISKRGRADGPSSGLPSSKKSRQPSTHPGTPVVASMLLGEHINTLCPFVFLFLS
Ga0182206_11562402	3300017433	Miscanthus Phyllosphere	VANTGEKLAGASATSKFPISIAFPGVSSGFVDVYEEYVPRLVPRGPHSVSKRGRIDGSSSGLPASKKSRKPSTRPSTPVVASMLLGEHILYS
Ga0182209_10811151	3300017436	Miscanthus Phyllosphere	MVNTREKLAGASATSKFPISIVFPRVSSRFVDVYEEYVPRLVPRGPHSVSKRGRIDGSSSSLPASKKSRKPSTRPGTPVVASMLLGEH
Ga0182209_11088321	3300017436	Miscanthus Phyllosphere	VVNTGENLVGASVISKFQTTTAFTGVSSGVVDVYEEYISHLVPRGPRSVSKRGRADGSSFGLPISKKSRQPSTHPGTLVIGSVLLGEH
Ga0182209_11384591	3300017436	Miscanthus Phyllosphere	TGSSVTSKFQITTVFPRVSSGFVDVYEEYVPRPVPRGPRSVPKRGQADGSSFGLPASKTSRQPSTHLGTPVIGSVLLGERINMFGLSIIYFCR
Ga0182191_10518143	3300017438	Miscanthus Phyllosphere	LGHNFVDPIPLDVLPAVVNIGENLAGASVTSKFPITIVFPRVSSGVVDIYEEYVPRPVPRGPRSVSKRGRADGSSSGLPASKKSRQPST
Ga0182221_10274522	3300017442	Miscanthus Phyllosphere	VAKIGEKLAGASATSKFPISTVLPRVSSRFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKPRKPSTLPGTPVVASMLLGEHI
Ga0182221_10803242	3300017442	Miscanthus Phyllosphere	PVVANTGKELAGASATSKSPISTAFPRVSSRFVDVYEEYVPHLVPRGPRSVSKRGRTDGSSSGLPASKKSRKPPGTPFVASMLLGEHI
Ga0182221_10864382	3300017442	Miscanthus Phyllosphere	MANTGKELAGASKTSKSPISTAFPRVSSGFVDVYEEYVPHLVPHGPCSVSKRGRTDGSSSGLPTTKKSRKPSTPPGTLVVASMLLGEHIYTLCPFVFLFLS
Ga0182221_11102771	3300017442	Miscanthus Phyllosphere	MANTGEKLAGASATSKFPISIVFPGVSSGFVDVYEEYVPRLVPRGPHSVSKRGRTDGSSSGLPVSKKPRKPSTLSGTPVVASMLLGEHI
Ga0182193_10049592	3300017443	Miscanthus Phyllosphere	VAETEGRLAGTSAISKSQTTTALPGVSSGFVDVYEEYVPRIVPRGPRSIPKRGRTDGSSSGLPVSKKPRKPSTFSGTPVVASMLL
Ga0182193_10870402	3300017443	Miscanthus Phyllosphere	EKLAGASATSKFPISTALPGVSSGFVDVYEENVPRLVPRGPHSVSKRGQMDGSSSGLPASKKSRKPSTLLGTPVVASMLLGEHI
Ga0182233_10710431	3300017680	Miscanthus Phyllosphere	MVNTRENLAGASVTSKFQITTVFPGVSSRVVDVYEEYVPHLVPRGPRSVSKRGRADGSSSGLPASKKSHQPSTHPGTTVIGSVLLGEHINMFGLSVIYLCL
Ga0182233_10758011	3300017680	Miscanthus Phyllosphere	LAKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRMDGSSSGLPVSKKPRKPSTLSGIPVVASMLLGEHI
Ga0182226_10109733	3300017681	Miscanthus Phyllosphere	PLDVLPVLAKAGEKLAGASTISKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI
Ga0182226_10339431	3300017681	Miscanthus Phyllosphere	VAKTREKLAGASTTSKFPISTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPASKKSRKPSTPPGTPVVASMLLGEHIYTLCPFVFLFLS
Ga0182229_10235563	3300017682	Miscanthus Phyllosphere	VAKTGEKLAGASATSKFPISTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPASKKSRKPSTLLGTPVVASMLLGEHI
Ga0182225_10139182	3300017684	Miscanthus Phyllosphere	VAKTGEKLAGASATSKFSFSTALPGVSSGFVVVYEEYVPRLVPRGPHSVPKRGQTDGSSSGLPVSKKPRKPSTLLGTLVVASMLLGEHI
Ga0182225_11269782	3300017684	Miscanthus Phyllosphere	VAKTRKELTVASATSKSPISTAFPRVSFGFVDVYEEYVPRLVPRGPRSVSKRGRMDGSSSGLPASKKSRKTSTPPGIPVVASMLLGEHIYTLCPFVFLFLS
Ga0182225_11448481	3300017684	Miscanthus Phyllosphere	VANTGEKLAGASTTSKFPISTVFPGVSSGFVDVYEEYVPRLVPRGPHSVSKRGRTDGSSSGLPASKKSRKPSTLPGTPVVAS
Ga0182227_10862381	3300017685	Miscanthus Phyllosphere	VAETGDRLAGTSAISKSRTFTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRMDGSSSGLPVSKKPRKPSTPSGTPVVASMLLGEHI
Ga0182227_11312751	3300017685	Miscanthus Phyllosphere	VVNTGENLAGASVISKFQITTAFPGVSSGVVDVYEEYVPRPVPRGPHSVSKRGRADGSSSGLPISKKSRQPSTHPGTLVIGSVLLGEHINMFGLSFIYLCL
Ga0182205_10751661	3300017686	Miscanthus Phyllosphere	MVNTREDLAGASVISKFQITTSFPGVSSRVVDVYEEYVPGPFPRGPRSVSKRGRADGSSSGLPTSKKSRLPSACPGTPVVASMLLGEHINMLCPFVVCFCL
Ga0182205_11200332	3300017686	Miscanthus Phyllosphere	LAKAGEKLAGASATSKFPISIAFPGVSFGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSSLPSSKKSRKPSIRLGTPVVASILLGEHILY
Ga0182205_11438931	3300017686	Miscanthus Phyllosphere	VANTGEKLTGASATSKFPLSTVLSGVSSGFVDVYEEYVPRLVPRGPRSVSKRGQTDGSSSGLPASKKSHKPSTPPGTPVVASMLLGEHIYTLCPFVFLLLS
Ga0182205_11484582	3300017686	Miscanthus Phyllosphere	LAKAREKLAGASATSKFPFSTALPGVSSGFVDVYEEYVPHLVPRGPRSVPKRGRTDGSSSGLPASKKSRKPSTLPGTLVVASMLLGEHIL
Ga0182231_10722662	3300017689	Miscanthus Phyllosphere	VANTGERLVGASAASKPPISTVFPGVSSGFVDVYEEYVPRLVPHAPRSVIKRGRMDGSSSGLPASKKSRKPSTPPGTPVVASMLLGEHIYTLCPFVFLLLS
Ga0182223_10263852	3300017690	Miscanthus Phyllosphere	VNTRENLAGASVTSKFQITTVFPRVSSGVVDVYEEYVPRPVPRGPRSVSKRGRADGSSSGLPASKKSRQPSTHPGTPVVASMLLGEHINTLCPFVFLFLS
Ga0182223_10562472	3300017690	Miscanthus Phyllosphere	VAKTGEKLAGASATSKFPFSTALPGVSSGFVDVYEEYVPRLVPRGPRSVSKRGRTDGSSSGLPASKKSRKPSTLPGTPVVASMLLGEHI
Ga0182223_10862281	3300017690	Miscanthus Phyllosphere	VAETRDRLAGTSTISKSQTSTALPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRMDGSSSGLPVSKKPGKPSTPSGTPVVASMLLGEHI
Ga0182223_10952701	3300017690	Miscanthus Phyllosphere	VVKTREKLVGASATSKFPISTALPGVSSGFVDVYEEYVPCLVPCGPRSVSKRGQTDGSSSGLPASKKSHKPSTPPGTPVVASMLLGEHINTLCPFFSCFYLEPSTFILFSVGALV
Ga0207689_101133722	3300025942	Miscanthus Rhizosphere	LAKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI
Ga0207689_116133751	3300025942	Miscanthus Rhizosphere	MVNTGENLAGASVTSKFPITTVFPGVSSGVVDVYEEYVPRPVPQGPRSVSKRGRADGSSSGLPASKKSRQPSTRPGTPFVASMLL
Ga0207648_101206113	3300026089	Miscanthus Rhizosphere	LEKAGEKLAGASATSKFPFSTVLPGVSSGFVDVYEEYVPRLVPRGPRSVPKRGRTDGSSSGLPVSKKSRKPSTLPGTPVVASMLLGEHI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095641

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences