Metagenome / Metatranscriptome Family F095553

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095553
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	114 residues
Representative Sequence	GVKPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Number of Associated Samples	85
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.10 %
% of genes from short scaffolds (< 2000 bps)	99.05 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.524 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (19.048 % of family members)
Environment Ontology (ENVO)	Unclassified (43.810 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 42.96% Coil/Unstructured: 57.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF08282	Hydrolase_3	14.29
PF00480	ROK	4.76
PF00158	Sigma54_activat	2.86
PF00342	PGI	1.90
PF03976	PPK2	0.95
PF03652	RuvX	0.95
PF00923	TAL_FSA	0.95
PF02826	2-Hacid_dh_C	0.95
PF01182	Glucosamine_iso	0.95
PF13492	GAF_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	14.29
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	14.29
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	14.29
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	14.29
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	14.29
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	9.52
COG0166	Glucose-6-phosphate isomerase	Carbohydrate transport and metabolism [G]	1.90
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.95
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	0.95
COG0816	YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor	Translation, ribosomal structure and biogenesis [J]	0.95
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.52 %
Unclassified	root	N/A	30.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.52 %
Unclassified	root	N/A	30.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.52 %
Unclassified	root	N/A	30.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	46.67 %
Unclassified	root	N/A	30.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.43 %

Name	Rank	Taxonomy	Distribution
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	45.71 %
Unclassified	root	N/A	30.48 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	7.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.90 %

Name	Rank	Taxonomy	Distribution
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	45.71 %
Unclassified	root	N/A	30.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7.62 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	0.95 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.95 %

Name	Rank	Taxonomy	Distribution
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	45.71 %
Unclassified	root	N/A	30.48 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7.62 %
SAR116 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	0.95 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	45.71 %
Unclassified	root	N/A	30.48 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	7.62 %
unclassified SAR116 cluster	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster	0.95 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	44.76 %
Unclassified	root	N/A	30.48 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	7.62 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.95 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.95 %
SAR116 cluster alpha proteobacterium HIMB100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	0.95 %

Name	Rank	Taxonomy	Distribution
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	44.76 %
Unclassified	root	N/A	30.48 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	7.62 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.95 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.95 %
SAR116 cluster alpha proteobacterium HIMB100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	0.95 %

Name	Rank	Taxonomy	Distribution
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	44.76 %
Unclassified	root	N/A	30.48 %
Sandaracinus amylolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	7.62 %
Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	0.95 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.95 %
SAR116 cluster alpha proteobacterium HIMB100	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_1320_length_1578_cov_8.471483	Not Available	1610	Open in IMG/M
3300000956\|JGI10216J12902_104455158	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300000956\|JGI10216J12902_106994598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	553	Open in IMG/M
3300001991\|JGI24743J22301_10044670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	894	Open in IMG/M
3300004114\|Ga0062593_101926312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	654	Open in IMG/M
3300004157\|Ga0062590_102436384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	553	Open in IMG/M
3300004643\|Ga0062591_100927647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	820	Open in IMG/M
3300005330\|Ga0070690_101082328	Not Available	635	Open in IMG/M
3300005333\|Ga0070677_10718360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	564	Open in IMG/M
3300005338\|Ga0068868_100272865	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300005338\|Ga0068868_101257533	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	686	Open in IMG/M
3300005338\|Ga0068868_102281626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	516	Open in IMG/M
3300005354\|Ga0070675_102224417	Not Available	505	Open in IMG/M
3300005364\|Ga0070673_100648568	Not Available	966	Open in IMG/M
3300005367\|Ga0070667_101729832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → unclassified SAR116 cluster → SAR116 cluster alpha proteobacterium HIMB100	588	Open in IMG/M
3300005456\|Ga0070678_100519598	Not Available	1053	Open in IMG/M
3300005457\|Ga0070662_101866490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	519	Open in IMG/M
3300005543\|Ga0070672_101376885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	631	Open in IMG/M
3300005549\|Ga0070704_101422956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	636	Open in IMG/M
3300005617\|Ga0068859_103138327	Not Available	503	Open in IMG/M
3300005718\|Ga0068866_10890958	Not Available	625	Open in IMG/M
3300005719\|Ga0068861_101714750	Not Available	621	Open in IMG/M
3300005840\|Ga0068870_10104596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	1606	Open in IMG/M
3300005843\|Ga0068860_101791606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	636	Open in IMG/M
3300005844\|Ga0068862_101033938	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300006358\|Ga0068871_100098022	All Organisms → cellular organisms → Bacteria	2452	Open in IMG/M
3300006358\|Ga0068871_100223235	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300006791\|Ga0066653_10084420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	1409	Open in IMG/M
3300006844\|Ga0075428_101234678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	787	Open in IMG/M
3300007004\|Ga0079218_12394579	Not Available	620	Open in IMG/M
3300009553\|Ga0105249_13239765	Not Available	523	Open in IMG/M
3300010036\|Ga0126305_10979982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	579	Open in IMG/M
3300010399\|Ga0134127_12009151	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	656	Open in IMG/M
3300010400\|Ga0134122_12873644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	535	Open in IMG/M
3300011400\|Ga0137312_1104984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	502	Open in IMG/M
3300011403\|Ga0137313_1019702	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1087	Open in IMG/M
3300012905\|Ga0157296_10196123	Not Available	641	Open in IMG/M
3300012986\|Ga0164304_11186606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	616	Open in IMG/M
3300012989\|Ga0164305_11939904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	536	Open in IMG/M
3300013297\|Ga0157378_10696881	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300013306\|Ga0163162_11156411	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300013308\|Ga0157375_11014479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	969	Open in IMG/M
3300013308\|Ga0157375_13460606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	525	Open in IMG/M
3300014272\|Ga0075327_1183253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	663	Open in IMG/M
3300014326\|Ga0157380_10783624	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300014326\|Ga0157380_13262445	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300014969\|Ga0157376_13002869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	511	Open in IMG/M
3300015077\|Ga0173483_10847344	Not Available	533	Open in IMG/M
3300015200\|Ga0173480_10816378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	597	Open in IMG/M
3300015371\|Ga0132258_13127757	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300015373\|Ga0132257_100414566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1639	Open in IMG/M
3300015374\|Ga0132255_102231968	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300018073\|Ga0184624_10208250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	873	Open in IMG/M
3300018081\|Ga0184625_10302010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	836	Open in IMG/M
3300018083\|Ga0184628_10388814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium	729	Open in IMG/M
3300018422\|Ga0190265_11700031	Not Available	741	Open in IMG/M
3300018469\|Ga0190270_11073468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	836	Open in IMG/M
3300018469\|Ga0190270_11242659	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	785	Open in IMG/M
3300018469\|Ga0190270_11633118	Not Available	697	Open in IMG/M
3300018481\|Ga0190271_10925721	Not Available	996	Open in IMG/M
3300018481\|Ga0190271_13343829	Not Available	537	Open in IMG/M
3300019263\|Ga0184647_1455814	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	568	Open in IMG/M
3300019356\|Ga0173481_10163359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	931	Open in IMG/M
3300022756\|Ga0222622_10914966	Not Available	643	Open in IMG/M
3300022756\|Ga0222622_10944388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	633	Open in IMG/M
3300025893\|Ga0207682_10186671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	949	Open in IMG/M
3300025893\|Ga0207682_10465924	Not Available	598	Open in IMG/M
3300025908\|Ga0207643_10993068	Not Available	543	Open in IMG/M
3300025926\|Ga0207659_11835159	Not Available	515	Open in IMG/M
3300025933\|Ga0207706_11027106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	692	Open in IMG/M
3300025940\|Ga0207691_11173910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	637	Open in IMG/M
3300025960\|Ga0207651_10757683	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300025981\|Ga0207640_11390819	Not Available	628	Open in IMG/M
3300026023\|Ga0207677_10957404	Not Available	774	Open in IMG/M
3300026023\|Ga0207677_11228722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	686	Open in IMG/M
3300026023\|Ga0207677_11962871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	544	Open in IMG/M
3300026089\|Ga0207648_10459947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → Sandaracinus amylolyticus	1160	Open in IMG/M
3300026118\|Ga0207675_101521307	Not Available	690	Open in IMG/M
3300027907\|Ga0207428_11248817	Not Available	516	Open in IMG/M
3300028381\|Ga0268264_10289301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1538	Open in IMG/M
3300028809\|Ga0247824_11102104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	507	Open in IMG/M
3300028819\|Ga0307296_10723721	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300030584\|Ga0247658_1154191	Not Available	508	Open in IMG/M
3300031538\|Ga0310888_10282395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	943	Open in IMG/M
3300031562\|Ga0310886_10655757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	649	Open in IMG/M
3300031847\|Ga0310907_10861943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	510	Open in IMG/M
3300031858\|Ga0310892_10102065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1572	Open in IMG/M
3300031892\|Ga0310893_10319962	Not Available	662	Open in IMG/M
3300031908\|Ga0310900_11207914	Not Available	629	Open in IMG/M
3300031908\|Ga0310900_11417851	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031908\|Ga0310900_11769372	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	525	Open in IMG/M
3300031944\|Ga0310884_10606882	Not Available	654	Open in IMG/M
3300031944\|Ga0310884_11005505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	518	Open in IMG/M
3300032003\|Ga0310897_10706813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	506	Open in IMG/M
3300032012\|Ga0310902_10280107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1018	Open in IMG/M
3300032075\|Ga0310890_10529353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	901	Open in IMG/M
3300032075\|Ga0310890_10665618	Not Available	812	Open in IMG/M
3300032075\|Ga0310890_11080143	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	649	Open in IMG/M
3300032179\|Ga0310889_10210199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	904	Open in IMG/M
3300032179\|Ga0310889_10688089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	533	Open in IMG/M
3300032179\|Ga0310889_10702940	Not Available	528	Open in IMG/M
3300032205\|Ga0307472_100674294	Not Available	925	Open in IMG/M
3300034115\|Ga0364945_0264536	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300034663\|Ga0314784_129703	Not Available	553	Open in IMG/M
3300034965\|Ga0370497_0011339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1702	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.19%
Host-Associated	Host-Associated	43.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.57%
Plants	Host-Associated → Plants	43.81%
Aquatic	Environmental → Aquatic	7.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%
Sediment	Environmental → Aquatic → Sediment	6.67%
Roots	Host-Associated → Plants → Roots	1.90%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Floodplain	Environmental → Terrestrial → Floodplain	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.90%
Loam	Environmental → Terrestrial → Soil → Loam	1.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.95%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.95%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	19.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	19.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	9.52%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.86%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030584	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_03331480	2140918013	Soil	PICVAPTGTVKIGAGKATPTRFTLERATADGRLLTMLTDQPLLFVGAGVPGAKPKAGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGAELVRLTAVKKTK
JGI10216J12902_1044551581	3300000956	Soil	ERVTGAGRLLTLLTDQPVLFVGAALPGAKSQAGYDFAVIDIEVDATGGGSGTLAPAAKIKMNGNAFVVEDYGVEVVRLTGVKKTK*
JGI10216J12902_1069945981	3300000956	Soil	ATAKGAGGGSASVPVTITVDRKMSQSEADSLVAAFKTGGAAALRKGLAGVKPTGTIQIGAGKPTPTRFTMERATGEGRLLTILTDQPLLFVGAGVPGAKPKEGYDFGVIDIEVDAKGTGSGTIAPAAKIKVPQGAFVVEDYSGETIRLTAVKKTK*
JGI24743J22301_100446702	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	ALGGVPPTGNISIGTGAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR*
Ga0062593_1019263121	3300004114	Soil	KSGSAPVAITIARKMARAEADPLVAAFKAGGAAALRKALVGVSPTGTVRIGTGPVIPARLTIEREVGGGRLLTIVTDKPVLFVGAKLPGAKKQEGYDFAVVDIEVDATGSGTGTISPAAKIKLNGDAFVVEDYFGDVIRLTAVKKTK*
Ga0062590_1024363841	3300004157	Soil	GVKPTGTIKIGAGKPTPTRFTIERVTGEGRLLTILTDQPLLFVGAGVPGAKPKEGYDFAVIDIEVDAKGTGSGTIAPAAKIKVPQGAFVVEDYSGETIRLTAVKKTK*
Ga0062591_1009276471	3300004643	Soil	EADPLVAAFKAGGAAALRKALVGVSPTGTVRIGTGPVIPARLTIEREVGGGRLLTIVTDKPVLFVGAKLPGAKKQEGYDFAVVDIEVDATGSGTGTISPAAKIKLNGDAFVVEDYFGDVIRLTAVKKTK*
Ga0070690_1010823281	3300005330	Switchgrass Rhizosphere	TPTRLTIERATSEGRLLTIVADKPLVFVGAGVPGAKPKKGYDFAVIDLQVDAKGGGSGTIAPAAKIKLNGDAFVVEDYSGEVVRLTAVKKTK*
Ga0070677_107183601	3300005333	Miscanthus Rhizosphere	GGAAALRKKLVGVPPTGTVRIGGGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKKGYDFAVIDLQVDAKGGGSGTIAPAAKIKLNGDAFVVEDYSGEVVRLTTVKKTK*
Ga0068868_1002728652	3300005338	Miscanthus Rhizosphere	VPPTGTVRVGTQPAVPTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK*
Ga0068868_1012575331	3300005338	Miscanthus Rhizosphere	GAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR*
Ga0068868_1022816261	3300005338	Miscanthus Rhizosphere	MPQKEAETFTNAFKSGGAAALRKALMGVAPTGSVKIGAGNATPTRITIERASGRGRLLTIVTDQPLLFLGAGVPGAKPKAGYDFAIIDIEVDATGSGAGTVAPAAKIKMNGDAFVVEDYGGNELIRLTAVKKTK*
Ga0070675_1022244171	3300005354	Miscanthus Rhizosphere	AAFKAGGAAALRKALTGVPPTGTIRVGAGTATPTRIAIERATGAGRLLTLVTDQPVLFVGAALPGAKSQAGYDFAVIDLEVDANGGGSGTLAPAAKIKMNGTAYVVEDYGVELVRLTGVKKTR*
Ga0070673_1006485682	3300005364	Switchgrass Rhizosphere	LAGVPPTGTVRVGTQPAVPTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK*
Ga0070667_1017298321	3300005367	Switchgrass Rhizosphere	LVAAFKAGGAEALRKKLVGVPPTGTVRVGGGGDTPTRLTIERATGEGRLLTIVTDKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGSGTIAPAAKIKLNGDAFVVEDYSGEVVRLTTVKKTK*
Ga0070678_1005195982	3300005456	Miscanthus Rhizosphere	TGTVRIGGGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKKGYDFAVIDLQVDAKGGGSGTIAPAAKIKLNGDAFVVEDYSGEVVRLTTVKKTK*
Ga0070662_1018664901	3300005457	Corn Rhizosphere	GEAALRKALVGVAPTGSVKIAGGAATPTRLTIERPTGDGRLLTIVTDRPLHFVGAGLPGAKAKEGYNLGVIDLIVDAKGGGTGTIAPAAKIRMNQSAFVVDDYGAEAVQLTAVKKTK*
Ga0070672_1013768851	3300005543	Miscanthus Rhizosphere	RLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0070704_1014229561	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	QALVAAFKKGGAAALRKALVGIPPTGFVRIGAASGTPTRFTIERPTPDGRLLTILTDQPLLFLGAGVPGAKPKAGYDFAIIDIEIDAKGNGSGTLAPAARLKMNQDAFTVEDFGVEVVRLTAVKKTT*
Ga0068859_1031383271	3300005617	Switchgrass Rhizosphere	GNISIGTGAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR*
Ga0068866_108909582	3300005718	Miscanthus Rhizosphere	ALVGVAPTGSVKVGAGRATPTRITIERASAGGRLLTMVADQPLLFLGAGVPGAKPKAGYDFAVIDIEVDAKGNGSGTVAPAAKIKMNGDAFVVEDYGEGELVRLTAVKKTK*
Ga0068861_1017147502	3300005719	Switchgrass Rhizosphere	LGGVPPTGNISIGTGAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR*
Ga0068870_101045961	3300005840	Miscanthus Rhizosphere	RFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR*
Ga0068860_1017916062	3300005843	Switchgrass Rhizosphere	GADALRKKLVGVPPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0068862_1010339381	3300005844	Switchgrass Rhizosphere	GGVPPTGNISIGTGAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR*
Ga0068871_1000980221	3300006358	Miscanthus Rhizosphere	VGVPPTGSVKIGGGAATPARMTIERATGDGRLLTIVTDKPLVFIGAGLPGAKAKEGYDFAVVDIQVDAKGNGSGTVAPAAKIKMNQDAFVVEDYGGVEIVRLTGVKKTK*
Ga0068871_1002232351	3300006358	Miscanthus Rhizosphere	RITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK*
Ga0066653_100844201	3300006791	Soil	GSAPVKVTIDRTMPASEAAPLVAAFKSGGAAALRKALVGVKPTGSVQVGKGKVTPTRFTIEREVGGGRLLTIVTDKPLVFIGATKAGAKPKAGYDFAVIDLQVDASGSGGGTIAPAATLKLNGDALVVEDYSGEVVRLSAVKKGS*
Ga0075428_1012346782	3300006844	Populus Rhizosphere	GGAAASAPVTVTVDRKMSQSEADSLVAAFKAGGAEALRKKLVGVPPTGTVRVGGGGDTPTRLTIERATGEGRLLTIVTDKPLVFVGAGVPGAKPKEGYDFAVIDLQIDAKGGGSGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0079218_123945792	3300007004	Agricultural Soil	GAGAATPTRIAIERVTGAGRLLTLLTDQPVLFVGAALPGAKSQAGYDFAVIDIEVDAKGGGSGTLAPAAKIKMNGNAFVVEDYGVEVVRLTGVTKTK*
Ga0105249_132397651	3300009553	Switchgrass Rhizosphere	DALVAAFKTGGEAALRKALVGVAPTGSVKIAGGAATPTRLTIERPTGDGRLLTIVTDRPLHFVGAGLPGAKAKEGYNLGVIDLIVDAKGGGTGTIAPAAKIKMNQSAFVVDDYGAEAVQLTAVKKTK*
Ga0126305_109799821	3300010036	Serpentine Soil	TSEGRLLMIVTDRPLAFLGAGLPGAKAKEGFDFGVIEMVIDAKGNGSGTIAPAAKLKLNAGALVVEDYATEVVQLTAVKKTK*
Ga0134127_120091511	3300010399	Terrestrial Soil	QSEADSLVAAFKAGGAEALRKKLVGVPPTGTVRVGGGGDTPTRLTIERATGEGRLLTIVTDKPLVFVGAGVPGAKPKEGYDFAVIDLQIDAKGGGSGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0134122_128736441	3300010400	Terrestrial Soil	TGGAAGLRKGFVGLKPTGTVRIGGGEATPTRFTLERVTDDGRLLTIVTDRPLLFVGGSAPGAKSRAGYEFAVIDIEIDGKGSGSGTIAPAAKLKMNQGALVVEDYGAEVVRLTAVKKTK*
Ga0137312_11049841	3300011400	Soil	TITIDRKMSESEAGSLANAFKAGGAAALRKGLEGVKPTGTVRIGTGNATPTRFTIERPVGAGRLLTILTDQPLLFVGAAAPGAKPREGYDFAVIDIEVDAQGNGSGTLAPAARLRLNQSAFVVEDYGAEVVRLTAVKKSK*
Ga0137313_10197021	3300011403	Soil	ESEAGSLANAFKAGGAAALRKGLEGVKPTGTVRIGTGNATPTRFTIERPVGAGRLLTILTDQPLLFVGAAAPGAKPREGYDFAVIDIEVDAQGNGSGTLAPAARLRLNQSAFVVEDYGAEVVRLTAVKKSK*
Ga0157296_101961232	3300012905	Soil	GSGNPTPTRVTIERPTGDGRLLTIVTDQALFFVGAGAPGAKPQAGFDFAVVDLEVNAKGSGTGNLAPAAKLKMNGDAFVVEDYGAKAVRLTAVTKAK*
Ga0164304_111866061	3300012986	Soil	GGASASAPVTVKVDRKMSQSEADPLVAAFKAGGADALRKKLVGVPPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKVGYDFAVIDLQVDAKGGGSGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0164305_119399041	3300012989	Soil	QREADTLTAAFKSGGAAALRKALVGVAPTGSVRIGAGSVTPTRFTIERPTGTGRLLTILTDQPLAFVGAGVPGAKAKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0157378_106968812	3300013297	Miscanthus Rhizosphere	PTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK*
Ga0163162_111564111	3300013306	Switchgrass Rhizosphere	ELAAAFKAGGAAALRKALAGVPPTGTVRVGTQPAVPTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK*
Ga0157375_110144791	3300013308	Miscanthus Rhizosphere	IGGGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0157375_134606061	3300013308	Miscanthus Rhizosphere	KMSQAEADKLGAAFRAGGAAALRKALVGVPPTGTIRLGASNPTPTRVTIERVTDKGRLLTILTDQALFFICAGLPGAKPQTGFDFAVVDLEVDAKGVGSGNLAPAAKLKMNENAFVVEDYGAEAVRLTSVTKAK*
Ga0075327_11832531	3300014272	Natural And Restored Wetlands	TGSVRIGDGSVTPTRFTIERPVGAGRLLTILTDRPLLFVGASAPGAKPREGYDFAVIDIEVDGQGNGSGTLAPAARLRLNQSAFVVEDYGAEVVRLTAVKKTK*
Ga0157380_107836243	3300014326	Switchgrass Rhizosphere	GAAALRKALAGVPPTGTIRIGAGAATPTRLTIERATGNGRLLTIVTDQALLFVGAGVPGAKSQAGYDFAVIDIEVDAKGSGSGTIAPAAKLKMNGSAFVVEDYAVEIVRLTDVKKTK*
Ga0157380_132624451	3300014326	Switchgrass Rhizosphere	IDRKMSQREAETFTTAFKSGGAAALRKALVGVAPTGSVKVGAGRATPTRITIERASAGGRLLTMVADQPLLFLGAGVPGAKPKAGYDFAVIDIEVDAKGNGSGTVAPAAKIKMNQDAFVVEDYGVELVRLTAVKKTK*
Ga0157376_130028691	3300014969	Miscanthus Rhizosphere	GTVRIGGGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK*
Ga0173483_108473441	3300015077	Soil	DGRLLTIVTDQALFFVGAGAPGAKPQAGFDFAVVDLEVNAKGSGTGNLAPAAKLKMNGDAFVVEDYGAEVVRLTAVKKTK*
Ga0173480_108163781	3300015200	Soil	AAFKTGGAAALRKALVGVSPTGTVRIGTGPVIPARLTIEREVGDGRLLTIVTDKPVLFVGAKLPGAKAQEGYDFAVVDIQVDATGSGTGTISPAAKIKLNGEAFVVEDYFGDVIRLTAVKKTK*
Ga0132258_131277572	3300015371	Arabidopsis Rhizosphere	GVPPTGTVRVGTQPAVPTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK*
Ga0132257_1004145662	3300015373	Arabidopsis Rhizosphere	TGTVRVGAGEVMPTRFTLERVTGDGRLLTILTDKPLLFVGGSAPGAKPREGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGAEVVRLTAVKKTK*
Ga0132255_1022319681	3300015374	Arabidopsis Rhizosphere	VRVGTQPAVPTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK*
Ga0184624_102082501	3300018073	Groundwater Sediment	KSGGAAALRKALVGVKPTGSVQVGKGKVTPTRFTIEREVGGGRLLTIVTDKPLVFIGATKAGAKPKAGYDFAVIDLQVDASGSGGGTIAPAATLKLNGDALVVEDYSGEVVRLSAVKKGS
Ga0184625_103020102	3300018081	Groundwater Sediment	TPTRFTIERPVGAGRLLTILTDRPLAFVGATAPGAKPREGYDFAVIDIEVDAQGNGAGTIAPAAKLKLNQSAFVVEDYGAEVVRLTAVKKTK
Ga0184628_103888142	3300018083	Groundwater Sediment	LVAAFKSGGAAALRKALVGVKPTGSVQVGKGKVTPTRFTIEREVGGGRLLTIVTDKPLVFIGATKAGAKPKAGYDFAVIDLQVDASGSGGGTIAPAATLKLNGDALVVEDYSGEVVRLSAVKKGS
Ga0190265_117000312	3300018422	Soil	VATPTRFTIERVTGDGRLLTILTDQPLLFLGASLPGAKAKEGYDFAVIDIVLDAKGNGTGTLAPAAKISLKQGAFVVEDYGVEGVQLTKVKKTK
Ga0190270_110734681	3300018469	Soil	RKMPQSEADALMAAFKTGGAAALRKGLVGIKPTGTVKLGAGSATPTRFTIERVTDAGRLLTILTDQPLFFVGAGTPGAKPKEGYDFAVIDIEIDGKGNGSGTLAPAAKLKVTQTGFVVEDYGAEGVRLTAVKKTK
Ga0190270_112426591	3300018469	Soil	GVAPTGSIQIGAGKATPTRFTLERATGDGRLLTILTDRPLLFLGAGVPGAKAKEGYDFGVIDLVVDAKGGGSGTIAPAAKIKMNQGAFVVEDYGAETVRLTAVKKTK
Ga0190270_116331181	3300018469	Soil	RTMSQTEAESLVAAFKTGGAAALRKALVGKAPTGSVRIGAGTVAPTRLTIDRPSASGRLLTILTDQPLLFVGAGVPGAKVKEGYDFAVIDIEIDAKGNGSGTLAPAAKIRMNQGAFVVEDYGAEVVRLTAVKKTK
Ga0190271_109257212	3300018481	Soil	DRMMPAGEAAPLVAAFKSGGSDAFRKALVGVAPTGSARVGDGKVIPTRISIERATGGGRLLTIVTDQTLVFIGGGAANAKPKAGYDYAIVDLILDANNTGTGTVAPAAKLKLNGDAFVVEDYSGEVVRLSAIKKTK
Ga0190271_133438291	3300018481	Soil	RKALVGVAPTGSVQVRDGKPTPSRFTLERAVGGGRLLTILTDQPLVFIGANEAGAKPKAGYDFAVIDIQVDAAGTGSGTVAPAAKLKLNGSAFVVEDYSGEVVRLNGVTKSK
Ga0184647_14558141	3300019263	Groundwater Sediment	TRFTIERPVGAGRLLTILTDQPLLFIGASAPGAKPREGYDFAVIDIEVDAQGNGSGTIAPAAKIKLNQSAFVVEDYGAEVVRLTAVKKTK
Ga0173481_101633591	3300019356	Soil	GTIKIGAGKPTPTRFTIERVTGEGRLLTILTDQPLLFVGAGVPGAKPKEGYDFAVIDIEVDAKGTGSGTIAPAAKIKVPQGAFVVEDYSGETIRLTAVKKTK
Ga0222622_109149662	3300022756	Groundwater Sediment	PTGTVQIGDGRPTPSRFAIARATGDGRLLTVLTDQPLVFIGATAPGAKPKAGYDFAVIDIQVDGSGNGSGTVAPAAKLKLNDTAFVVEDYSGEVVRLTGVKKTG
Ga0222622_109443881	3300022756	Groundwater Sediment	GKSASAPVTITIDRTMAESEAAPLVAAFKRGGSDALRKALVGVAPTGSVRVGDGKVIPTRFTIERASGGGRRLTILTEETLVFIGGGGPNAVQRAGYDFAIVDFQVDASGGGSGTLAPAARLKLNGGAFVVEDYTGDVVRLTAITRSR
Ga0207682_101866712	3300025893	Miscanthus Rhizosphere	VTGLRARGGFEVNLAWAHGALERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR
Ga0207682_104659241	3300025893	Miscanthus Rhizosphere	VKTAAGATATAPLELAITRKMPQGQAETLVNAFKTGGAAAFKKALAGVAPTGTVQIGTAAKVPTRLTIERVTGVGRLLTVVTDQPLLFLGASLPGAKATAGYDFAVIDIEIDAKGSGSGTLAPAAKLRVNQQGA
Ga0207643_109930682	3300025908	Miscanthus Rhizosphere	GGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKKGYDFAVIDLQVDAKGGGSGTIAPAAKIKLNGDAFVVEDYSGEVVRLTTVKKTK
Ga0207659_118351591	3300025926	Miscanthus Rhizosphere	AAFKAGGAAALRKALTGVPPTGTIRVGAGTATPTRIAIERATGAGRLLTLVTDQPVLFVGAALPGAKSQAGYDFAVIDLEVDANGGGSGTLAPAAKIKMNGTAYVVEDYGVELVRLTGVKKTR
Ga0207706_110271062	3300025933	Corn Rhizosphere	KTGGEAALRKALVGVAPTGSVKIAGGAATPTRLTIERPTGDGRLLTIVTDRPLHFVGAGLPGAKAKEGYNLGVIDLIVDAKGGGTGTIAPAAKIRMNQSAFVVDDYGAEAVQLTAVKKTK
Ga0207691_111739101	3300025940	Miscanthus Rhizosphere	PTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0207651_107576832	3300025960	Switchgrass Rhizosphere	LAGVPPTGTVRVGTQPAVPTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK
Ga0207640_113908191	3300025981	Corn Rhizosphere	SDALVKAFTSGGAAALRKALVGVAPTGSVQVGGGAVTPTRLTVERVTSTGRLLTILTDRPLLFLGAGAPGAKPKDGYDFAVVDIEVDAKGNGTGTLAPAAKLKVNQGTLVVDDYATEGVRLTAVKKTK
Ga0207677_109574042	3300026023	Miscanthus Rhizosphere	LRNAGCSIQSAGNATPTRITIERASGRGRLLTIVTDQPLLFLGAGVPGAKPKAGYDFAIIDIEVDATGSGAGTVAPAAKIKMNGDAFVVEDYGGNELIRLTAVKKTK
Ga0207677_112287221	3300026023	Miscanthus Rhizosphere	GAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR
Ga0207677_119628711	3300026023	Miscanthus Rhizosphere	GVPPTGTVRVGTQPAVPTRITIERTIPEGRLLTIVADQPVLFVGASVPGAKSQAGYDFAVIDLQVDAKGGGSGNLAPAAKIKMNGNAFVVEDYGIEAVRLTGVKKTK
Ga0207648_104599471	3300026089	Miscanthus Rhizosphere	QGEADRLVAAFKSGGAAALRKALGGVPPTGNISIGTGAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR
Ga0207675_1015213071	3300026118	Switchgrass Rhizosphere	AAALRKALGGVPPTGNISIGTGAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR
Ga0207428_112488171	3300027907	Populus Rhizosphere	SASAPVTITVDRKMSQGEADRLVAAFKSGGAAALRKALGGVPPTGNISIGTGAATPTRFTLERVTGEGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR
Ga0268264_102893011	3300028381	Switchgrass Rhizosphere	AGGADALRKKLVGVPPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0247824_111021041	3300028809	Soil	SQSEADPLVAAFKAGGADALRKKLVGVKPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0307296_107237211	3300028819	Soil	KSGGAAGLRKALVGVKPTGSVQVGKGKVTPTRFTIEREVGGGRLLTIVTDKPLVFIGATKAGAKPKAGYDFAVIDLQVDASGSGGGTIAPAATLKLNGDALVVEDYSGEVVRLSAVKKGS
Ga0247658_11541911	3300030584	Soil	GGAAALRKGLAGTPSTGTVQIGGGSATTTRFTLERVTGDGRLLTILTDQPLFFVGAGVVGAKPKEGYDFAVIDIVVDGKGTGSGTIAPAAKITMKQGAFVVEDYGVEVVQLTAVKKTK
Ga0310888_102823952	3300031538	Soil	TVKIGAGKATPTRFTLERATADGRLLTMLTDQPLLFIGAGVPGAKPKAGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGAELVRLTAVKKTK
Ga0310886_106557571	3300031562	Soil	GVKPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0310907_108619431	3300031847	Soil	RKMSQAEADKLGAAFRAGGAAALRKALVGVPPTGTIRLGASNPTPTRVTIERVTDKGRLLTILTDQALFFIGAGLPGAKPQTGFDFAVVDLEVDAKGVGSGNLAPAAKLKMNENAFVVEDYGAEAVRLTSVTKAK
Ga0310892_101020652	3300031858	Soil	QAEADKLGAAFRAGGAAALRKALVGVPPTGTIRLGASNPTPTRVTIERVTDKGRLLTILTDQALFFIGAGLPGAKPQTGFDFAVVDLEVDAKGVGSGNLAPAAKLKMNENAFVVEDYGAEAVRLTSVTKAK
Ga0310893_103199621	3300031892	Soil	TITIDRKMSQKEADSLAAAFKTGGAAALRKGLAGVAPTGTVKIGAGKATPTRFTLERATADGRLLTMLTDQPLLFIGAGVPGAKPKAGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGAELVRLTAVKKTK
Ga0310900_112079141	3300031908	Soil	KGMAGVAPTGTVKIGAGKATPTRFTLERATADGRLLTMLTDQPLLFIGAGVPGAKPKAGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGAELVRLTAVKKTK
Ga0310900_114178512	3300031908	Soil	TGVPPTGTIRVGAGTATPTRIAIERATGAGRLLTLVTDQPVLFVGAALPGAKSQAGYDFAVIDLEVDANGGGSGTLAPAAKIKMNGTAYVVEDYGVELVRLTGVKKTK
Ga0310900_117693722	3300031908	Soil	TATTTRFTLERATGDGRLLTILTDQPMLFVGAGLPGAKPKEGYDFAVLDIVLDAKGNGSGTIAPAAKIRLNQDAFVVEDYGVEVVRLTEVKKTK
Ga0310884_106068822	3300031944	Soil	GAGKPTPTRFTLERATADGRLLTMLTDQPLLFIGAGVPGAKPKAGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGVELVRLTAVKKTK
Ga0310884_110055051	3300031944	Soil	GVKPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGSGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0310897_107068131	3300032003	Soil	LRKKLVGVPPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0310902_102801071	3300032012	Soil	TATAAVKGAGGASASAPVTVTVDRKMSQSEADPLVAAFKAGGADALRKKLVGVPPTGTVRVGGGSETTTRLTIERTTGDGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0310890_105293532	3300032075	Soil	DSLAAAFKTGGAAALRKGMAGVAPTGTVKIGAGKATPTRFTLERATADGRLLTMLTDQPLLFIGAGVPGAKPKAGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGVELVRLTAVKKTK
Ga0310890_106656181	3300032075	Soil	TRFTIERPTSNGRLLTILTDQPLAFVGAGQPGAKPKEGYDFAVIDIELDAKGSGAGTLAPAAKIKMNGDAFVVEDYGAEAVQLTAVRKTK
Ga0310890_110801431	3300032075	Soil	LRKKLVGVKPTGTVRIGAGSETPTRLTIERATGEGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0310889_102101991	3300032179	Soil	TATPTRFTLERPVGAGRLLTILTDRPLLFVGASAPGAKPREGYDFAVIDIEVDAQGNGSGTIAPAAKLKLNQSAFVVEDYGAEVVRLTAVKKTK
Ga0310889_106880891	3300032179	Soil	VTVDRKMSQSEADPLVAAFKAGGADALRKKLVGVPPTGTVRVGGGSETTTRLTIERTTGDGRLLTIVADKPLVFVGAGVPGAKPKEGYDFAVIDLQVDAKGSGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAVKKTK
Ga0310889_107029401	3300032179	Soil	KALGGVPPTGKVSVGSGADTPTRITIERVTGDGRLLTILTDKPLLFVGASLPGAKSQAGYDFGVIDIEVDAKGNGSGTLAPAAKIKMNRDAFVVEDYGIEAVRLTGVKKTR
Ga0307472_1006742941	3300032205	Hardwood Forest Soil	PTSEGRLLTIITDQPLLFVGAGLPGAKPQAGYDFAVIDIMVAANGTGSGTLAPAAKIRMNQGAFVVSDYGTEAVQLTAVKKTK
Ga0364945_0264536_2_277	3300034115	Sediment	PTRLTTERATGGGRLITIVTDQPLVFIGAAKPGAKSQAGYDFAVVDLILDANNGGTGTIAPAAKIKLNQDAFVVEDYSGEVVRLTAIAKGK
Ga0314784_129703_9_410	3300034663	Soil	MSQKEADSLAAAFKTGGAAALRKGLAGVAPTGTVKIGAGKPTPTRFTLERATAEGRLLTMLTDQPLLFIGAGVPGAKPKAGYDFAVIDIEVDGKGSGSGTIAPAAKIKMNQGAFVVEDYGVELVRLTAVKKTK
Ga0370497_0011339_1_321	3300034965	Untreated Peat Soil	VAPTGTIKIGSGASTPTRIAIERTTGEGRLLTIIADQPLLFLGAGVPGAKPREGYDFAAIHIEVDAKGSGSGTLAPAAKLKLNQGAYVVEDYGAEVIQLTAVKKTK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095553

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences