NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095443

Metagenome / Metatranscriptome Family F095443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095443
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 62 residues
Representative Sequence MGIRNFLRRFKLRSVQAGDGQRSVDNVDAMASMAQTRVDPSGGAPATFPPNYVKPVDEGRPRH
Number of Associated Samples 89
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.38 %
% of genes near scaffold ends (potentially truncated) 19.05 %
% of genes from short scaffolds (< 2000 bps) 94.29 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(22.857 % of family members)
Environment Ontology (ENVO) Unclassified
(34.286 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.857 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.16%    β-sheet: 0.00%    Coil/Unstructured: 64.84%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02775TPP_enzyme_C 30.48
PF17147PFOR_II 21.90
PF01855POR_N 4.76
PF00072Response_reg 0.95
PF02798GST_N 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0674Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunitEnergy production and conversion [C] 4.76
COG4231TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunitEnergy production and conversion [C] 4.76

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.33 %
UnclassifiedrootN/A6.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig505735All Organisms → cellular organisms → Bacteria1733Open in IMG/M
3300000953|JGI11615J12901_10323529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1671Open in IMG/M
3300000956|JGI10216J12902_100481209All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300000956|JGI10216J12902_103146456All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300000956|JGI10216J12902_107410149All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300000956|JGI10216J12902_113180088All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300004081|Ga0063454_101064866All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300004114|Ga0062593_101302348All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300004114|Ga0062593_101731765All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300004157|Ga0062590_102719340Not Available528Open in IMG/M
3300004480|Ga0062592_101979111All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300005093|Ga0062594_101486814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales694Open in IMG/M
3300005093|Ga0062594_102659774All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005093|Ga0062594_102878575All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005164|Ga0066815_10063765Not Available634Open in IMG/M
3300005329|Ga0070683_101116180All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300005336|Ga0070680_100511592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1028Open in IMG/M
3300005338|Ga0068868_100164024All Organisms → cellular organisms → Bacteria1837Open in IMG/M
3300005440|Ga0070705_101083024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales655Open in IMG/M
3300005440|Ga0070705_101286616All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300005441|Ga0070700_100304375All Organisms → cellular organisms → Bacteria1165Open in IMG/M
3300005459|Ga0068867_100842729All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300005459|Ga0068867_101340587All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300005526|Ga0073909_10168168All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300005526|Ga0073909_10322773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 111WW2708Open in IMG/M
3300005535|Ga0070684_100485606All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300005543|Ga0070672_100778617All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300005577|Ga0068857_100822877All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300005616|Ga0068852_101478246All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300005713|Ga0066905_100109360All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300005713|Ga0066905_100133117All Organisms → cellular organisms → Bacteria1759Open in IMG/M
3300005713|Ga0066905_100497456All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300005719|Ga0068861_100889216Not Available843Open in IMG/M
3300006574|Ga0074056_11815076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1972Open in IMG/M
3300006575|Ga0074053_11983053All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300006605|Ga0074057_12340562All Organisms → cellular organisms → Bacteria1645Open in IMG/M
3300006852|Ga0075433_11654347All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300006881|Ga0068865_102057818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300006904|Ga0075424_100619162All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300007076|Ga0075435_101179452All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300009094|Ga0111539_11061522All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300009098|Ga0105245_10497057All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300009147|Ga0114129_11656073All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300009553|Ga0105249_11088524All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300010036|Ga0126305_10004046All Organisms → cellular organisms → Bacteria6928Open in IMG/M
3300010036|Ga0126305_10377646All Organisms → cellular organisms → Bacteria931Open in IMG/M
3300010042|Ga0126314_10402381All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300010147|Ga0126319_1536879All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300010371|Ga0134125_10808053All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300010375|Ga0105239_11468073All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300010375|Ga0105239_11793497All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300012198|Ga0137364_10332731All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300012200|Ga0137382_10052260All Organisms → cellular organisms → Bacteria2557Open in IMG/M
3300012355|Ga0137369_10785456All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300012885|Ga0157287_1068784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
3300012896|Ga0157303_10260829All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300012907|Ga0157283_10081334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia825Open in IMG/M
3300012951|Ga0164300_10680817Not Available620Open in IMG/M
3300012958|Ga0164299_10493369All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300012960|Ga0164301_10453903All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300018028|Ga0184608_10096951All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300018054|Ga0184621_10102085All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300018067|Ga0184611_1017207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2180Open in IMG/M
3300018072|Ga0184635_10067531All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300018073|Ga0184624_10040985All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1837Open in IMG/M
3300018077|Ga0184633_10136499All Organisms → cellular organisms → Bacteria1271Open in IMG/M
3300018077|Ga0184633_10410579All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300018083|Ga0184628_10114319All Organisms → cellular organisms → Bacteria1393Open in IMG/M
3300019279|Ga0184642_1616501All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300019361|Ga0173482_10349982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria669Open in IMG/M
3300019361|Ga0173482_10501142Not Available589Open in IMG/M
3300019876|Ga0193703_1047714All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300021951|Ga0222624_1378052All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300022195|Ga0222625_1737723All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300022756|Ga0222622_11139451All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300023266|Ga0247789_1036534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria873Open in IMG/M
3300025899|Ga0207642_10222853All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1055Open in IMG/M
3300025901|Ga0207688_10525912All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300025918|Ga0207662_11227411All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300025927|Ga0207687_10497960All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300025932|Ga0207690_10067489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2454Open in IMG/M
3300025935|Ga0207709_10515393All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300025938|Ga0207704_10578899All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300025944|Ga0207661_10052457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3258Open in IMG/M
3300025944|Ga0207661_10219680All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300026075|Ga0207708_11213411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria660Open in IMG/M
3300027821|Ga0209811_10005656All Organisms → cellular organisms → Bacteria4014Open in IMG/M
3300027907|Ga0207428_11034885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia576Open in IMG/M
3300028380|Ga0268265_10741319All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300028710|Ga0307322_10203408All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300028714|Ga0307309_10067690All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300028719|Ga0307301_10104723All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300028768|Ga0307280_10342057Not Available551Open in IMG/M
3300028793|Ga0307299_10303086All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300028803|Ga0307281_10147954Not Available822Open in IMG/M
3300028814|Ga0307302_10260416All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300030829|Ga0308203_1029323All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300030990|Ga0308178_1171559All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300031092|Ga0308204_10240503All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300031094|Ga0308199_1171271All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300031152|Ga0307501_10148555All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300031170|Ga0307498_10011792All Organisms → cellular organisms → Bacteria1777Open in IMG/M
3300031198|Ga0307500_10156251All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300031199|Ga0307495_10156806All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300031740|Ga0307468_100889489All Organisms → cellular organisms → Bacteria771Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.86%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment7.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil6.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.81%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.86%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.86%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.86%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.90%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.95%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.95%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.95%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.95%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.95%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.95%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012885Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023266Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300030829Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_117751002124908045SoilLRLKSVQAGEGQREIDNVDAMSTMAQTRVDPSGGAPATFPPNYVRPTDEGRPRH
JGI11615J12901_1032352923300000953SoilMFKFLKRFKLKSVQAGDGQRSVDNVDAMTAAAQNRGVDPTGGGAPALFPPNYVKTDDEGRPPH*
JGI10216J12902_10048120913300000956SoilVGLRSFLRRLRLKSVQAGEGQREIDNVDAMSTMAQTRVDPSGGAPATFPPNYVRPTDEGRPRH*
JGI10216J12902_10314645613300000956SoilMGLRNFLRRFRLKSVQAGEGQRSIDNVDAMASMGQTRVDPSGTGAPATFPPNYVPPADEGRPRH*
JGI10216J12902_10741014913300000956SoilMGLRSFLKRLRLRSVQAGDGQRSVDNVDAMSTMAQTRADPSGGAPATFPPNYVPPADEGRPRH*
JGI10216J12902_11318008833300000956SoilMGLRSFLKRFRVKSVQAGDGQRSVDNVDAMASMAPSRGAEAMGGSGAALFPPNYVKDDDDGRPRH*
Ga0063454_10106486613300004081SoilVLRKLLRRFRLKSVQAGDGQRSVDNIDAMTSTAQARMTPQGGPATFPPDYVKTEDDGRP
Ga0062593_10130234833300004114SoilMGIRNFVRRFRLKSVQAGEGQRSVDNVDAMATTTVDKADPQGEWPGSVPPGYIKSYDEGRPPK*
Ga0062593_10173176513300004114SoilMGLRNFLRRFRLKSVQAGEGQRDIDNIDAMAGAASSVRFDASGGRPATFPPNYVRPTDEG
Ga0062590_10271934023300004157SoilMLRNWLKKFRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPNYVRTDDEGRPPH*
Ga0062592_10197911123300004480SoilMFKFLRRFKLKSVQAGDGQRSVDNVDAMTAAAQNRGIDPTGGGAPALFPPDYVKDDDDGRPRH*
Ga0062594_10148681423300005093SoilMFKFLRRFKLKSVQAGDGQRSVDNIDAMTAAAQNRGIDPTGGGAPALFPPDYVKDDDDGRPRH*
Ga0062594_10265977413300005093SoilVLRNWLKKLRLKSVQAGDGQRSVDNIDAMSSMSQTRVDPSGGAPASFPPNYVKTDDGKPRH*
Ga0062594_10287857513300005093SoilMFKFLKRLKLKSVQAGEDQRSVCNIDAMTSTAQTRMTPQGGPATFPPDYVRTEDDGRPRN
Ga0066815_1006376523300005164SoilMGIRNFSRRFKLRSVQAGDGQRSVDNVDAMASMAQTRVDPSGGAPATFPPNYVKPVDEGRPRH*
Ga0070683_10111618013300005329Corn RhizosphereMGLRNFLRRFRLKSVQAAEGQRSIDNVDAMASMAQTRVDPSGTGAPATFPPNYVPPADEGRPKH*
Ga0070680_10051159223300005336Corn RhizosphereMFKFLKRFKLKSVQAGDGQRSVDNIDAMTAAAQNRGIDPTGGGAPALFPPDYVKDDDDGRPRH*
Ga0068868_10016402433300005338Miscanthus RhizosphereMFRRLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPNYVRTDDEGRPPH*
Ga0070705_10108302423300005440Corn, Switchgrass And Miscanthus RhizosphereMFKFLRRIKLKSVQAGDGQRSVDNVDAMTAAAQNRGIDPTGGGAPALFPPDYVKDDDDGRPRH*
Ga0070705_10128661623300005440Corn, Switchgrass And Miscanthus RhizosphereMLRNWLKKFRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGSGAPALFPPNYVRTDDEGRPPH*
Ga0070700_10030437523300005441Corn, Switchgrass And Miscanthus RhizosphereMLRKWLQKLKLKSVQAGEGQRSIDNVDAMSSMAQTRVDPTGGAPATFPPDYVKTDDGR
Ga0068867_10084272933300005459Miscanthus RhizosphereVFRKLLKRFRLKSVQAGDGQRSVDNIDAMTSTAQSRMTPQGGPATFPPDYVKTEDDGRPRH*
Ga0068867_10134058713300005459Miscanthus RhizosphereMLRNLLRKLRLKSVQAGAGQREIDNVDAMASMAQTRVDPSGGAPATFPPNYVRPTDEGRPRH*
Ga0073909_1016816823300005526Surface SoilVFRKLLKRFRLKSVQAGDGQRSVDNIDAITSTAQTRMTPQGGPATFPPDYVKTEDDGRPRH*
Ga0073909_1032277323300005526Surface SoilMGIRNFSRRFELRSVQAGDGQRSVDNVDAMASMAQTRVDPSGGAPATFPPNYVKPVDEGRPRH*
Ga0070684_10048560633300005535Corn RhizosphereMGLRNFLRRFRLKSVQAGEGQRSIDNVDAMATMAQTRVDPSGTGAPATFPPNYVPPADEGRPRH*
Ga0070672_10077861723300005543Miscanthus RhizosphereVFRKLLKRFRLKSVQAGDGQRSVDNIDAMTSTAQTRMSPQGGPATFPPDYVKTEDEGRPRH*
Ga0068857_10082287713300005577Corn RhizosphereMGLRNFLRRFRLKSVQAGEGQRSIDNVDAMATMAQTRVDPSGTGAPATFPPNYVPPADEGRP
Ga0068852_10147824633300005616Corn RhizosphereMFHSWLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGSGAPALFPPNYVRTDDEGRPPH*
Ga0066905_10010936033300005713Tropical Forest SoilMGLREFLRRFRLKSVQAGDGQRSIDNVDAMASAHSQKSSLTGGPAQFPPDYVKTDDEGRPRH*
Ga0066905_10013311723300005713Tropical Forest SoilMGLRSFLRRFRLKSVQAGDGQRSVDNIDAMTAVAQSQRMDLGAGAPALFPPDYVKTDDEGRPPH*
Ga0066905_10049745633300005713Tropical Forest SoilMGLRSFLKRFKLKSVQAGEGQRSVDNVDAMAAGHSQKWSPTGGPALFPPDYVKTDDDGRPRH*
Ga0068861_10088921623300005719Switchgrass RhizosphereRNWLKKFRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPNYVRTDDEGRPPH*
Ga0074056_1181507623300006574SoilMGIRNFLRRFKLRSVQAGDGQRSVDNVDAMASMAQTRVDPSGGAPATFPPNYVKPVDEGRPRH*
Ga0074053_1198305313300006575SoilLRSVQAGDGQRSVDNVDAMASMAQTRVDPSGGAPATFPPNYVKPVDEGRPRH*
Ga0074057_1234056233300006605SoilMLRKLLEKLRPSKLKSVQAGDGQRSVDNIDAMTAAAQSQKLDPFGGGGPATFPPDYIKTDDGKPRH*
Ga0075433_1165434723300006852Populus RhizosphereMGLRKFLRRFRLKSVQAGEGQRDIDNIDAMAGAASSVRFDASGGRPATFPPNYVRPTDEGRPRH*
Ga0068865_10205781833300006881Miscanthus RhizosphereVFRKLLKRFRLKSVQAGDGQRSVDNIDAMTSTAQTRMSPQGGPATFPPDYVKTEDDGRPRH*
Ga0075424_10061916213300006904Populus RhizosphereMLRNWLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGSGAPALFPPNYVRTDDEGRPPH
Ga0075435_10117945213300007076Populus RhizosphereMLRNWLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGSGAPALFPPNYVRTDDEGRPPH*
Ga0111539_1106152223300009094Populus RhizosphereVFRKLLKRFRLKSVQAGDGQRSVDNIDAMTSTAQTRMTPQGGPATFPPDYVKTEDDGRPRH*
Ga0105245_1049705713300009098Miscanthus RhizosphereMFRSWLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPDYVRTDDEG
Ga0114129_1165607333300009147Populus RhizosphereMRIRNFLRRFKLRSVQAGDGQRSVDNIDAMTAAAQSQRLDPHGGGPATFPPDYVKPVDEGRPRH*
Ga0105249_1108852413300009553Switchgrass RhizosphereMLRNLLRKLWLKSVQAGAGQREIDNVDAMASMAQTRVDPSGGAPATFPPNYVRPTDEG
Ga0126305_1000404623300010036Serpentine SoilVFRKLLKRFRLKSVQAGEGQRTVDNIDAMTSTAQTRMTPQGGPATFPPDYVKTEDDGRPRH*
Ga0126305_1037764613300010036Serpentine SoilVFRKLLKRFRLKSVQAGEGQRSVDNIDAMTSTAQTRMTPQGGPATFPPDYVKTEDDGRPRH*
Ga0126314_1040238123300010042Serpentine SoilVFRKLLKRFRLKSVRAGEGQRTVDNIDAMTSTAQTRMTPQGGPATFPPDYVKTEDDGRPRH*
Ga0126319_153687933300010147SoilMGIRNFLRRFKLRSVQAGDGQRSVDNVDAMASMSQTRLDPSGGGPATFPPNYVKPADEGRPRH*
Ga0134125_1080805323300010371Terrestrial SoilMLRKWFQKLKLKSVQAGEGQRSIDNVDAMSSMAQTRVDPTGGAPATFPPDYVKTD
Ga0105239_1146807333300010375Corn RhizosphereMLRNWLKKFRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPNYVRT
Ga0105239_1179349713300010375Corn RhizosphereMFRNWLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGSGAPALFPPNYVRTDDEGRPPH*
Ga0137364_1033273133300012198Vadose Zone SoilMGIRSFLRRFKLRSVQAGDGQRSVDNVDAMASMSQTRLDPSGGAPATFPPNYVKPADEGRPRH*
Ga0137382_1005226033300012200Vadose Zone SoilMGIRSFLRRFKLRSVQAGDGQRSVDNVDAMASMSQTRLDPSGGGPATFPPNYVKPADEGRPRH*
Ga0137369_1078545623300012355Vadose Zone SoilMGLRDFLKRFRLKSVQAGEGQREIDNVDAVSSMAQTRVDPSGGAPATFPPNYVRPTDEGRPRH*
Ga0157287_106878423300012885SoilMFKFLRRFKLKSVQAGDGQRPVDNIDAMTAAAQNRGIDPTGGGAPALFPPDYVKDDDDGRPRH*
Ga0157303_1026082923300012896SoilMGLRNFLRRFRLKSVQAGEGQRDIDNIDAMAGAASSVRFDASGGRPATFPPNYVRPTDEGRPRH*
Ga0157283_1008133423300012907SoilMFRSWLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPDYVKDDDDGRPRH*
Ga0164300_1068081723300012951SoilMGIRNFIGRFRLKSVQAGEGQRSVDNVDAMATTTVDKADPQGEWPGSVPPGYIKSYDEGRPPK*
Ga0164299_1049336933300012958SoilMGIRNFIRRFRLKSLQAGEGQRSVDNVDAMATTTVDKADPQGEWPGSVPPGYIKSYDEGRPPK*
Ga0164301_1045390333300012960SoilMGIRNFSRRFELRSVQAGDGQRSVDNVDAMASMAQTRVDPSVGAPATFPPNYVKPVDEGRPRH*
Ga0184608_1009695123300018028Groundwater SedimentMGIRNFMRSFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPSGGAPATFPPNYVRPADEGRPRH
Ga0184621_1010208523300018054Groundwater SedimentMGIRNFMRRFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPSGGAPATFPPNYVRPADEGRPRH
Ga0184611_101720743300018067Groundwater SedimentMGIRNFMRRFKLKSVQAGHGQRSVDNVDAMASMSQTRIEPNGGGPATFPPNYVRPADEGRPRH
Ga0184635_1006753123300018072Groundwater SedimentMGIRNFMRRFKLKMVQAGDGQRSVDNVDAMASMSQTRLDPNGGAPATFPPNYVRPADEGRPRH
Ga0184624_1004098533300018073Groundwater SedimentMGIRNLIRRFKLKSVQAGDGQRSIDNVDAMAPMSQTRIDPNGGGPATFPPNYVRPADEGRPRH
Ga0184633_1013649933300018077Groundwater SedimentMGIRNFMRRFKLKMVQAGDGQRSVDNVDAMASMSQTRLDPNGGAPATFPPNYVRPADDGRPRH
Ga0184633_1041057923300018077Groundwater SedimentFKLKSVQAGHGQRSVDNVDAMASMSQTRIDPNGGGPATFPPNYVRPADEGRPRH
Ga0184628_1011431923300018083Groundwater SedimentMGIRNFIGRFKLKSVQAGEGQRSVDNVDAMASMSQTRIDPNGGGPATFPPNYVKPADEGRPRH
Ga0184642_161650133300019279Groundwater SedimentMGIRNFLRSFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPSGGAPATFPPNYVRPADEGRPRH
Ga0173482_1034998223300019361SoilMFKFLKRFKLKSVQAGDGQRSVDNVDAMTAAAQNRGIDPTGGGAPALFPPDYVKDDDDGRPRH
Ga0173482_1050114223300019361SoilRLKSVQAGEGQRDIDNIDAMAGAASSVRFDASGGRPATFPPNYVRPTDEGRPRH
Ga0193703_104771413300019876SoilMGIRNFMRSFKLKSVQAGDGQRSVDNVDAMASMSQTRIDPNGGAPATFPPNYVRPADEGRPRH
Ga0222624_137805223300021951Groundwater SedimentMGIRNFMRSFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPNGGAPATFPPNYVRPADEGRPRH
Ga0222625_173772313300022195Groundwater SedimentMLRKLLRRFKLKSVQAGDGQRSVDNIDALSSTAQTRFDPSGGAPATFPPDYVRPADDGRPRH
Ga0222622_1113945113300022756Groundwater SedimentVLRRLLRKIRLKSVQAGEGQRSVDNIDAMSSMSQTRIDPSGGAPATFPPNYVKQDDGRPR
Ga0247789_103653423300023266SoilMFKFLRRFKLKSVQAGDGQRSVDNVDAMTAAAQNRGIDPTGGGAPALFPPDYVKDDDDGRPRH
Ga0207642_1022285323300025899Miscanthus RhizosphereMLRNLLRKLRLKSVQAGAGQREIDNVDAMASMAQTRVDPSGGAPATFPPNYVRPTDEGRPRH
Ga0207688_1052591213300025901Corn, Switchgrass And Miscanthus RhizosphereMLRNWLKKFRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPNYVRTDDEGRPPH
Ga0207662_1122741113300025918Switchgrass RhizosphereMLRNLLRKLRLKSVQAGAGQREIDNVDAMASMAQTRVDPSGGAPATFPPNYVRP
Ga0207687_1049796023300025927Miscanthus RhizosphereMFRSWLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGGGAPALFPPNYVRTDDEGRPPH
Ga0207690_1006748913300025932Corn RhizosphereTRRAAVLRKLLSRFRLKSVQAGDGQRSIDNVDAIASMAQTRLDPSGGAPATFPPNYVKQEDGRPRH
Ga0207709_1051539333300025935Miscanthus RhizosphereVFRKLLKRFRLKSVQAGDGQRSVDNIDAMTSTAQTRMSPQGGPATFPPDYVKTEDEGRPR
Ga0207704_1057889923300025938Miscanthus RhizosphereMFRRLKKLRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGTGAPALFPPNYVRTDDEGRPPH
Ga0207661_1005245733300025944Corn RhizosphereMFKFLKRLKLKSVQAGEDQRSVGNIDAMTSTAQTRMTPQGGPATFPPDYVRTEDDGRPRN
Ga0207661_1021968033300025944Corn RhizosphereMGLRSFLRRFRLKSVQAGEGQRSIDNVDAMASMAQTRVDPSGTGAPATFPPNYVPPADEGRPKH
Ga0207708_1121341133300026075Corn, Switchgrass And Miscanthus RhizosphereMLRNWLKKFRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGSGAPALFPPNYVRTDDEGRPPH
Ga0209811_1000565663300027821Surface SoilMGIRNFLRRFKLRSVQAGDGQRSVDNVDAMASMAQTRVDPSGGAPATFPPNYVKPVDEGRPRH
Ga0207428_1103488523300027907Populus RhizosphereVFRKLLKRFRPKSVQAGDGQRSVDNIDAMTSTAQTRMTPQGGPATFPPDYVKTEDDGRPR
Ga0268265_1074131923300028380Switchgrass RhizosphereMLRNWLKKFRLKSVQAGDGQRSVDNIDAMTAAAQNRGVDPTGAGAPALFPPNYVRTDDEGRPPH
Ga0307322_1020340823300028710SoilMLRNLLRKLRLKSVQADEGQRSMDNVDAMSSMAQTRIDPSGGAPASFPPDYVKTDDGRPK
Ga0307309_1006769033300028714SoilMGIRNFMRSFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPSGGAPATFPPNYVRPADDGRPRH
Ga0307301_1010472323300028719SoilMGIRNFMRRFKLKSVQAGHGQRSVDNVDAMASMSQTRLDPSGGAPATFPPNYVRPADEGRPRH
Ga0307280_1034205723300028768SoilMGIRNFIRRFKLKSVQAGEGQRSLDNVDAMASMSQTRIDPNGGGPATFPPNYVKPTDEGRPRH
Ga0307299_1030308613300028793SoilTRTSAMLRNLLRKLRLKSVQADEGQRSMDNVDAMSSMAQTRIDPSGGAPASFPPDYVKTDDGRPKH
Ga0307281_1014795423300028803SoilMGIRNFMRRFKLKSVQAGHGQRSVDNVDAMASMSQTRIDPNGGGPATFPPNYVRPADEGRPRH
Ga0307302_1026041633300028814SoilMGIRNFMRSFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPSGGAPATFPPNYVRPADEGRPR
Ga0308203_102932323300030829SoilMGIRNFMRSFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPSGGSPATFPPNYVRLADEGRPRH
Ga0308178_117155913300030990SoilMGIRNFMRSFKLKSVQAGDGQRSVDNVDAMASMSQTRLDPNGGAPATFPPNYVRPADEARPRH
Ga0308204_1024050313300031092SoilMGIRNFIRRFKLKSVQAGEGQRSLDNVDAMASMSQTRIDPNGGGPATFPPNYVK
Ga0308199_117127133300031094SoilMLRNLLRKLRLKSVQAGEGQRSMDNVDAMSSMAQTRIDPSGGAPASFPPDYVKTDDGRPK
Ga0307501_1014855513300031152SoilMGIRSFLRRFKLRSVQAGDGQRSVDNVDAMASMSQTRLDPSGGGPATFPPNYVKPADEGRPRH
Ga0307498_1001179223300031170SoilMGIRNFIRRFKLKSVQAGEGQRSVDNVDAMASMTQTRIDPNGGGPATFPPNYVKSADEGRPRH
Ga0307500_1015625133300031198SoilMGIRNFIRRFKLKSVQAGEGQRSVDNVDAMASMSQTRIDPNGGGPATFPPNYVKSADEGRPRH
Ga0307495_1015680623300031199SoilMGIRSFLRRFKLRSVQAGDGQRSVDNVDAMASMAQTRLDPSGGAPATFPPNYVRPADEGRPRH
Ga0307468_10088948923300031740Hardwood Forest SoilMLRNLLRKLRLKSVQAGEGQREIDNVDAMASMAQTRVDPSGGAPATFPPNYVRPTDEGRPRH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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