Metagenome / Metatranscriptome Family F095436

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095436
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	44 residues
Representative Sequence	ERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Number of Associated Samples	77
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.90 %
% of genes near scaffold ends (potentially truncated)	96.19 %
% of genes from short scaffolds (< 2000 bps)	92.38 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.238 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (26.667 % of family members)
Environment Ontology (ENVO)	Unclassified (42.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.66% β-sheet: 0.00% Coil/Unstructured: 75.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF09084	NMT1	61.90
PF05378	Hydant_A_N	6.67
PF02653	BPD_transp_2	0.95
PF13379	NMT1_2	0.95
PF01315	Ald_Xan_dh_C	0.95
PF03404	Mo-co_dimer	0.95
PF02538	Hydantoinase_B	0.95
PF00589	Phage_integrase	0.95
PF01546	Peptidase_M20	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	61.90
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	61.90
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	13.33
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.24 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.24 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.24 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.33 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	89.52 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.33 %
Unclassified	root	N/A	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.76 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	3.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.76 %
Chelativorans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans	3.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.76 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.95 %
unclassified Chelativorans	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	4.76 %
Bradyrhizobium sp. Leo121	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo121	0.95 %
Chelativorans sp. J32	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002JBQ7T	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300000955\|JGI1027J12803_103937381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300004463\|Ga0063356_103712627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300004633\|Ga0066395_10095795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1420	Open in IMG/M
3300004633\|Ga0066395_10598910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300004635\|Ga0062388_102793862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300005332\|Ga0066388_100550579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans	1783	Open in IMG/M
3300005332\|Ga0066388_101439371	Not Available	1200	Open in IMG/M
3300005332\|Ga0066388_103162580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300005332\|Ga0066388_104146845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300005445\|Ga0070708_101844699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300005552\|Ga0066701_10183309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans	1277	Open in IMG/M
3300005559\|Ga0066700_10177600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans	1459	Open in IMG/M
3300005713\|Ga0066905_100002161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7197	Open in IMG/M
3300005713\|Ga0066905_101421495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300005713\|Ga0066905_102198580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300005764\|Ga0066903_101474424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1283	Open in IMG/M
3300005764\|Ga0066903_105133297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300005764\|Ga0066903_105705887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300005764\|Ga0066903_107077059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300006047\|Ga0075024_100115159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1193	Open in IMG/M
3300006578\|Ga0074059_10008966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300006880\|Ga0075429_100425565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1163	Open in IMG/M
3300006903\|Ga0075426_10346196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300007788\|Ga0099795_10299409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300009792\|Ga0126374_11805546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300010043\|Ga0126380_12149176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300010046\|Ga0126384_11783675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300010047\|Ga0126382_10121729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo121	1732	Open in IMG/M
3300010047\|Ga0126382_11591337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300010048\|Ga0126373_11377419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300010048\|Ga0126373_12588851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300010358\|Ga0126370_10241306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1395	Open in IMG/M
3300010358\|Ga0126370_10425443	Not Available	1099	Open in IMG/M
3300010359\|Ga0126376_12310610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300010360\|Ga0126372_10849683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300010361\|Ga0126378_12053647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300010361\|Ga0126378_12776697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300010362\|Ga0126377_11462774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	757	Open in IMG/M
3300010362\|Ga0126377_12062948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300010366\|Ga0126379_10265090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1702	Open in IMG/M
3300010366\|Ga0126379_11700878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300010366\|Ga0126379_13854675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300010376\|Ga0126381_100353273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2033	Open in IMG/M
3300010376\|Ga0126381_102676740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300010379\|Ga0136449_100531769	All Organisms → cellular organisms → Bacteria → Proteobacteria	2029	Open in IMG/M
3300010398\|Ga0126383_10087144	Not Available	2747	Open in IMG/M
3300010398\|Ga0126383_10168163	All Organisms → cellular organisms → Bacteria → Proteobacteria	2068	Open in IMG/M
3300010398\|Ga0126383_13456394	Not Available	516	Open in IMG/M
3300010868\|Ga0124844_1272169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300011270\|Ga0137391_10997931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300012096\|Ga0137389_10837515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300012189\|Ga0137388_10807935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300012189\|Ga0137388_11663650	Not Available	573	Open in IMG/M
3300012971\|Ga0126369_12325137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300012971\|Ga0126369_13197058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300012971\|Ga0126369_13412724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300016319\|Ga0182033_11223328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300016341\|Ga0182035_10838367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	808	Open in IMG/M
3300016371\|Ga0182034_10799752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300016387\|Ga0182040_11462941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300016404\|Ga0182037_11515079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300016445\|Ga0182038_11005571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300016445\|Ga0182038_12089462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300021479\|Ga0210410_11702130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300021560\|Ga0126371_10353208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1606	Open in IMG/M
3300021560\|Ga0126371_13763169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300025910\|Ga0207684_10507684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300027854\|Ga0209517_10628025	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300027874\|Ga0209465_10134931	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300027874\|Ga0209465_10337342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300027875\|Ga0209283_10197643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1336	Open in IMG/M
3300027915\|Ga0209069_10050182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1962	Open in IMG/M
3300030013\|Ga0302178_10540051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300031545\|Ga0318541_10168734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1206	Open in IMG/M
3300031561\|Ga0318528_10003895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Chelativorans → unclassified Chelativorans → Chelativorans sp. J32	6269	Open in IMG/M
3300031572\|Ga0318515_10110893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1445	Open in IMG/M
3300031640\|Ga0318555_10008155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4477	Open in IMG/M
3300031682\|Ga0318560_10252354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300031723\|Ga0318493_10898497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300031747\|Ga0318502_10392770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300031764\|Ga0318535_10141204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300031769\|Ga0318526_10350970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300031771\|Ga0318546_10217917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1307	Open in IMG/M
3300031771\|Ga0318546_10667246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300031777\|Ga0318543_10068168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1485	Open in IMG/M
3300031779\|Ga0318566_10012811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3541	Open in IMG/M
3300031821\|Ga0318567_10360384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	822	Open in IMG/M
3300031821\|Ga0318567_10799076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300031835\|Ga0318517_10255176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300031859\|Ga0318527_10530034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300031860\|Ga0318495_10256731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300031890\|Ga0306925_12197470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300031893\|Ga0318536_10213628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300031902\|Ga0302322_103287450	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300031902\|Ga0302322_103533225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300031959\|Ga0318530_10237980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300031981\|Ga0318531_10421597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300032010\|Ga0318569_10278586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300032025\|Ga0318507_10327629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300032063\|Ga0318504_10376262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300032089\|Ga0318525_10244938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300032094\|Ga0318540_10246390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300032160\|Ga0311301_10479720	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300032261\|Ga0306920_102558557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.14%
Host-Associated	Host-Associated	2.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Aquatic	Environmental → Aquatic	2.86%
Plants	Host-Associated → Plants	2.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.43%
Peat	Environmental → Terrestrial → Peat	2.86%
Sediment	Environmental → Aquatic → Sediment	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.90%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.29%
Loam	Environmental → Terrestrial → Soil → Loam	17.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	26.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.95%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_07169380	2170459003	Grass Soil	AERFDLSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
JGI1027J12803_1039373811	3300000955	Soil	SKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE*
Ga0063356_1037126272	3300004463	Arabidopsis Thaliana Rhizosphere	FDLSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE*
Ga0066395_100957951	3300004633	Tropical Forest Soil	HEKFDMSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDAGKS*
Ga0066395_105989102	3300004633	Tropical Forest Soil	DMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE*
Ga0062388_1027938621	3300004635	Bog Forest Soil	MSKYMTNEQTLQYLYALREKTVPVYSHSYAGRPPVPNSGKE*
Ga0066388_1005505793	3300005332	Tropical Forest Soil	MSKYMSNQEVIDYLYKLREKTVPIYSHSYAGRPPVADKK*
Ga0066388_1014393711	3300005332	Tropical Forest Soil	ETFDMSKYMTNEQTLHYLRALREKTVPVYSHSYAGRPPVPDGGKE*
Ga0066388_1031625801	3300005332	Tropical Forest Soil	KYMSNKDVVEYLYRLREKTVPVYSHSYAGRPPVADKPKE*
Ga0066388_1041468451	3300005332	Tropical Forest Soil	DMVHHEKFDMSKYMTNEQILHYLRGLREKTVPVYSHSYAGRPPVPEGEKE*
Ga0070708_1018446992	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RFDMSKYMSNREVIDYLCKLREKTVPVYSHSYAGRPPVPDKK*
Ga0066701_101833093	3300005552	Soil	LGDMVHEERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAKE*
Ga0066700_101776001	3300005559	Soil	ERFDLSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE*
Ga0066905_1000021613	3300005713	Tropical Forest Soil	MSKYMNNREVIDYLYRLREKTVPVYSHSYAGRPPVADKK*
Ga0066905_1014214952	3300005713	Tropical Forest Soil	HAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKTEE*
Ga0066905_1021985801	3300005713	Tropical Forest Soil	VHAERFDMSKYMTNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAKE*
Ga0066903_1014744241	3300005764	Tropical Forest Soil	VHREKFDMAKYMTNEQVLQYLYRLREKTVPVYSHSYTGRPPVPDAGKKE*
Ga0066903_1051332972	3300005764	Tropical Forest Soil	TNEQCLKYLYALREKTVPVYSHSYTGRPPLPDGGKG*
Ga0066903_1057058871	3300005764	Tropical Forest Soil	FDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKTEE*
Ga0066903_1070770591	3300005764	Tropical Forest Soil	MVHHEKFDMSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDAGKS*
Ga0075024_1001151592	3300006047	Watersheds	EKFDMSKYMSNEQVIQYLYGLREKTVPVYSHSYAGRPPAPNDGKE*
Ga0074059_100089662	3300006578	Soil	VHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE*
Ga0075429_1004255651	3300006880	Populus Rhizosphere	YMSNKDVVEYLYRLREKTVPVYSHSYAGRPPVADKPKE*
Ga0075426_103461961	3300006903	Populus Rhizosphere	SNEQVIHYLYSLREKTVPVYSHSYAGRPPAPEAGKT*
Ga0099795_102994091	3300007788	Vadose Zone Soil	EQVLKYLYGLREKTVPVYSHSYTGRPPVPDGGKA*
Ga0126374_118055462	3300009792	Tropical Forest Soil	YMTNEQCLKYLYALREKTVPVYSHSYTGRPPLPDGGKE*
Ga0126380_121491762	3300010043	Tropical Forest Soil	DMVHHEKFDMSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDADKT*
Ga0126384_117836752	3300010046	Tropical Forest Soil	YMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAKE*
Ga0126382_101217292	3300010047	Tropical Forest Soil	MSKYINNREVIDYLYRLREKTVPVYSHSYAGRPPVADKK*
Ga0126382_115913371	3300010047	Tropical Forest Soil	MSKYMSNKDVVEYLYRLREKTVPVYSHSYAGRPPVADKPKE*
Ga0126373_113774192	3300010048	Tropical Forest Soil	ERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPAPDKAEE*
Ga0126373_125888512	3300010048	Tropical Forest Soil	HEKFDMSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPD*
Ga0126370_102413061	3300010358	Tropical Forest Soil	DDMVHHEKFDLSKYMTNEQVVKYLYGLREKTVPVYSHSYTGRPPVPDGGKG*
Ga0126370_104254431	3300010358	Tropical Forest Soil	PLEDMVHYETFDMSKYMTNEQTLHYLRALREKTVPVYSHSYAGRPPVPDGGKE*
Ga0126376_123106102	3300010359	Tropical Forest Soil	DMVHHEKFDMSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDAGKS*
Ga0126372_108496831	3300010360	Tropical Forest Soil	SKYMSNREVIEYLYRLRERTVPVYSHSYAGRPPVPDKAEE*
Ga0126378_120536471	3300010361	Tropical Forest Soil	MSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE*
Ga0126378_127766971	3300010361	Tropical Forest Soil	PLADMVHAERFDMSKYMSNREVIEYLYGLREKTVPLYSHSYAGRPPIPDKAEE*
Ga0126377_114627741	3300010362	Tropical Forest Soil	MSNKDVVEYLYRLREKTVPVYSHSYAGRPPVADKPKE*
Ga0126377_120629482	3300010362	Tropical Forest Soil	DDMVHHEKFDMSKYMTNEQVLKYLYGLREKTVPVYSHSYTGRPPVPDGGNG*
Ga0126379_102650901	3300010366	Tropical Forest Soil	MSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDADKK*
Ga0126379_117008781	3300010366	Tropical Forest Soil	LDDMVHHEKFDMSKYMTNEQVVKYLYGLREKTVPVYSHSYTGRPPVPDGEKG*
Ga0126379_138546751	3300010366	Tropical Forest Soil	REVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE*
Ga0126381_1003532731	3300010376	Tropical Forest Soil	KYMSNEEVIRYLYSLREKTVPVYSHSYAGRPPVPDTGKA*
Ga0126381_1026767402	3300010376	Tropical Forest Soil	HEKFDMAKYMSNEEVIRYLYSLREKTVPVYSHSYAGRPPVPDTGKA*
Ga0136449_1005317692	3300010379	Peatlands Soil	MVHRERYEMSKYMTNEQVVKYLYDLREKTVPVYGHFTSGRPGVRDQT*
Ga0126383_100871441	3300010398	Tropical Forest Soil	EQTLHYLRGLREKTVPVYSHSYAGRPPMPDGGKE*
Ga0126383_101681633	3300010398	Tropical Forest Soil	EKFDMSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDAGKS*
Ga0126383_134563942	3300010398	Tropical Forest Soil	KYMTNEQVLKYLYALREKTVPVYSHSYTGRPPVPDAGKE*
Ga0124844_12721691	3300010868	Tropical Forest Soil	EERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDK*
Ga0137391_109979313	3300011270	Vadose Zone Soil	DDMVHHEKFDMSKYMTNEQVLKYLYGLREKTVPVYSHSYTGRPPVPDGGKE*
Ga0137389_108375151	3300012096	Vadose Zone Soil	MVHHEKFDMSKYMTNEQVLKYLYGLREKTVPVYSHSYTGRPPVPDGGKA*
Ga0137388_108079352	3300012189	Vadose Zone Soil	HHEKFDMSKYMTNEQVLKYLYGLREKTVPVYSHSYTGRPPVPDGGKK*
Ga0137388_116636501	3300012189	Vadose Zone Soil	EKFDMSKYMTNEQVLKYLYGLREKTVPVYSHSYTGRPPVPDRGKE*
Ga0126369_123251371	3300012971	Tropical Forest Soil	MTNEQVLKYLYGLREKTVPVYSHSYTGRPPVPDGGKG*
Ga0126369_131970582	3300012971	Tropical Forest Soil	SNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDAGKS*
Ga0126369_134127241	3300012971	Tropical Forest Soil	EQCLKYLYALREKTVPVYSHSYTGRPPLPGGGKG*
Ga0182033_112233281	3300016319	Soil	HAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0182035_108383671	3300016341	Soil	PLEDMVHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0182034_107997522	3300016371	Soil	LEDMVHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0182040_114629412	3300016387	Soil	AERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0182037_115150791	3300016404	Soil	RPLEDMVHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0182038_110055712	3300016445	Soil	SKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAQE
Ga0182038_120894621	3300016445	Soil	EQALQYLYALREKTVPVYSHSYAGRPPVPDTGQPAGGKG
Ga0210410_117021301	3300021479	Soil	EDMVHAERFDLSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0126371_103532081	3300021560	Tropical Forest Soil	DMVHHEKFDMSKYMSNEQVIRYLYSLREKTVPVYSHSYAGRPPVPDAGKS
Ga0126371_137631691	3300021560	Tropical Forest Soil	NEQVIRYLYSLREKTVPVYSHSYAGRPPVPDAGKK
Ga0207684_105076842	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0209517_106280251	3300027854	Peatlands Soil	NEQVLQYLYALREKTVPVYSHSYAGRPPTPLPKGSE
Ga0209465_101349311	3300027874	Tropical Forest Soil	HYDKFDMTKYMSNEEVIRYLYALREKTVPVYSHSYAGRPPVPDPGKA
Ga0209465_103373422	3300027874	Tropical Forest Soil	AERFDISKYMSNREVIEYLYRLREKTMPVYSHSYAGRPPVPDKAEE
Ga0209283_101976433	3300027875	Vadose Zone Soil	KYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0209069_100501821	3300027915	Watersheds	MSKYMSNEQVIQYLYGLREKTVPVYSHSYTGRPPAPHDGKE
Ga0302178_105400512	3300030013	Palsa	DKFDMSKYMTNEQILHYLHGLREKTVPVYSHSYAGRPPVPDGGKE
Ga0318541_101687341	3300031545	Soil	DMVHRDRFDMSKYMTNEQTLQYLYALREKTVPVYSHSYQGRPPVSDGGKE
Ga0318528_100038956	3300031561	Soil	VHAERFDMSKYMSNREVVEYLYRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0318515_101108931	3300031572	Soil	RPLEDMVHRDRFDMSKYMTNEQTLQYLYALREKTVPVYSHSYQGRPPVSDGGKE
Ga0318555_100081554	3300031640	Soil	HRPLGDMVHEERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0318560_102523541	3300031682	Soil	DMVHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318493_108984972	3300031723	Soil	YMSNREVVEYLYRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0318502_103927702	3300031747	Soil	LEDMVHAERFDMSKYMSNREVIEYLYGLREKTVPLYSHSYAGRPPIPDKAEE
Ga0318535_101412041	3300031764	Soil	MSKYMTNEQTLQYLYALREKTVPVYSHSYQGRPPVSDGGKE
Ga0318526_103509702	3300031769	Soil	SKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318546_102179171	3300031771	Soil	DMVHEERFDLSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0318546_106672462	3300031771	Soil	NREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAQE
Ga0318543_100681681	3300031777	Soil	ERFDLSKYMSNREVIEYLCRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0318566_100128111	3300031779	Soil	HEERFDLSKYMSNREVIEYLCRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0318567_103603842	3300031821	Soil	LEDMVHAERFDMSKYLSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318567_107990761	3300031821	Soil	VHAERFDVSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAQE
Ga0318517_102551762	3300031835	Soil	RFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318527_105300342	3300031859	Soil	VHCDRFDMSKYMTNEQTLQYLYALREKTVPVYSHSYQGRPPVSDGGKE
Ga0318495_102567311	3300031860	Soil	EDMVHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0306925_121974702	3300031890	Soil	MVHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPAPDKAKE
Ga0318536_102136281	3300031893	Soil	RPLGDMVHEERFDLSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0302322_1032874501	3300031902	Fen	MTNEQILQYLRALREKTVPVYSHSYAGRPPVPQDGGGR
Ga0302322_1035332252	3300031902	Fen	NEQTLQYLYALREKTVPVYSHSYAGRPPVPDGGKG
Ga0318530_102379802	3300031959	Soil	EMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318531_104215972	3300031981	Soil	RPLEDMVHAERFDVSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAQE
Ga0318569_102785861	3300032010	Soil	DRVHAERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318507_103276292	3300032025	Soil	ERFDMSKYMSNREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318504_103762622	3300032063	Soil	KYMTNEQTLQYLYALREKTVPVYSHSYQGRPPVSDGGKE
Ga0318525_102449381	3300032089	Soil	NREVIEYLYRLREKTVPVYSHSYAGRPPVPDKAEE
Ga0318540_102463901	3300032094	Soil	DIVHEERFDLSKYMSNREVIEYLCRLREKTVPVYSHSYAGRPPVPDKAKE
Ga0311301_104797202	3300032160	Peatlands Soil	MVHRERYEMSKYMTNEQVVKYLYDLREKTVPVYGHFTSGRPGVRDQT
Ga0306920_1025585571	3300032261	Soil	SKYMTNEQTLQYLYALREKTVPVYSHSYQGRPPVSDGGKE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095436

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences