Metagenome / Metatranscriptome Family F095098

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095098
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	64 residues
Representative Sequence	MHLLSQGPTQLAGAAALPLVAGGLLSDPGSVVAGMGELLLARSLKVAAVLLGAVVLNRLVRWLL
Number of Associated Samples	65
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	95.10 %
% of genes near scaffold ends (potentially truncated)	95.24 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.286 % of family members)
Environment Ontology (ENVO)	Unclassified (34.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.65% β-sheet: 0.00% Coil/Unstructured: 54.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01070	FMN_dh	4.76
PF00491	Arginase	1.90
PF02604	PhdYeFM_antitox	0.95
PF02508	Rnf-Nqr	0.95
PF13538	UvrD_C_2	0.95
PF00872	Transposase_mut	0.95
PF13610	DDE_Tnp_IS240	0.95
PF00924	MS_channel	0.95
PF01957	NfeD	0.95
PF04519	Bactofilin	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	4.76
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	4.76
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	1.90
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1347	Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD	Energy production and conversion [C]	0.95
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.95
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.95
COG2209	Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE	Energy production and conversion [C]	0.95
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.95
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.95
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.95
COG4657	Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfA subunit	Energy production and conversion [C]	0.95
COG4660	Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfE subunit	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
All Organisms	root	All Organisms	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
cellular organisms	root	All Organisms → cellular organisms	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.95 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.95 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Candidatus Competibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter	0.95 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Candidatus Competibacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter → Candidatus Competibacter denitrificans	0.95 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Candidatus Competibacter denitrificans Run_A_D11	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter → Candidatus Competibacter denitrificans → Candidatus Competibacter denitrificans Run_A_D11	0.95 %
unclassified Blastococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.71 %
Blastococcus sp. DSM 44268	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44268	0.95 %
Candidatus Competibacter denitrificans Run_A_D11	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter → Candidatus Competibacter denitrificans → Candidatus Competibacter denitrificans Run_A_D11	0.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_107684077	Not Available	723	Open in IMG/M
3300004157\|Ga0062590_101559906	Not Available	666	Open in IMG/M
3300005562\|Ga0058697_10027318	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2047	Open in IMG/M
3300005562\|Ga0058697_10118481	Not Available	1120	Open in IMG/M
3300005562\|Ga0058697_10517667	Not Available	611	Open in IMG/M
3300005981\|Ga0081538_10203442	Not Available	810	Open in IMG/M
3300006844\|Ga0075428_101919150	Not Available	615	Open in IMG/M
3300006904\|Ga0075424_102151433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → unclassified Blastococcus → Blastococcus sp. DSM 44268	587	Open in IMG/M
3300009789\|Ga0126307_10998698	Not Available	676	Open in IMG/M
3300009840\|Ga0126313_10197001	Not Available	1544	Open in IMG/M
3300009840\|Ga0126313_10892553	Not Available	725	Open in IMG/M
3300010036\|Ga0126305_10872387	Not Available	614	Open in IMG/M
3300010036\|Ga0126305_10999229	Not Available	574	Open in IMG/M
3300010037\|Ga0126304_10861683	Not Available	615	Open in IMG/M
3300010038\|Ga0126315_10224646	Not Available	1138	Open in IMG/M
3300010038\|Ga0126315_10650190	Not Available	684	Open in IMG/M
3300010040\|Ga0126308_10948758	Not Available	601	Open in IMG/M
3300010041\|Ga0126312_10427668	Not Available	943	Open in IMG/M
3300010041\|Ga0126312_10705639	Not Available	729	Open in IMG/M
3300010042\|Ga0126314_10493103	Not Available	889	Open in IMG/M
3300010042\|Ga0126314_11291791	Not Available	547	Open in IMG/M
3300010042\|Ga0126314_11332402	Not Available	538	Open in IMG/M
3300010044\|Ga0126310_10211725	Not Available	1282	Open in IMG/M
3300010044\|Ga0126310_10853707	Not Available	705	Open in IMG/M
3300010045\|Ga0126311_11863171	Not Available	510	Open in IMG/M
3300010132\|Ga0127455_1014641	Not Available	713	Open in IMG/M
3300010166\|Ga0126306_10752082	Not Available	784	Open in IMG/M
3300017965\|Ga0190266_10547420	Not Available	687	Open in IMG/M
3300018054\|Ga0184621_10246131	Not Available	638	Open in IMG/M
3300018074\|Ga0184640_10103839	Not Available	1239	Open in IMG/M
3300018076\|Ga0184609_10005667	All Organisms → cellular organisms → Bacteria	4384	Open in IMG/M
3300018078\|Ga0184612_10395028	Not Available	695	Open in IMG/M
3300018081\|Ga0184625_10122731	Not Available	1351	Open in IMG/M
3300018081\|Ga0184625_10581516	Not Available	552	Open in IMG/M
3300019869\|Ga0193705_1092618	Not Available	564	Open in IMG/M
3300019873\|Ga0193700_1013861	Not Available	1316	Open in IMG/M
3300021078\|Ga0210381_10013910	Not Available	2018	Open in IMG/M
3300022694\|Ga0222623_10146978	Not Available	917	Open in IMG/M
3300027750\|Ga0209461_10087843	Not Available	688	Open in IMG/M
3300027873\|Ga0209814_10039517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1960	Open in IMG/M
3300028708\|Ga0307295_10067650	Not Available	937	Open in IMG/M
3300028711\|Ga0307293_10055403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1235	Open in IMG/M
3300028711\|Ga0307293_10166029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300028712\|Ga0307285_10216858	Not Available	539	Open in IMG/M
3300028715\|Ga0307313_10215007	Not Available	597	Open in IMG/M
3300028716\|Ga0307311_10090455	Not Available	848	Open in IMG/M
3300028717\|Ga0307298_10068288	Not Available	988	Open in IMG/M
3300028720\|Ga0307317_10097485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300028720\|Ga0307317_10179134	Not Available	714	Open in IMG/M
3300028721\|Ga0307315_10202055	Not Available	616	Open in IMG/M
3300028722\|Ga0307319_10159837	Not Available	732	Open in IMG/M
3300028744\|Ga0307318_10035833	Not Available	1628	Open in IMG/M
3300028744\|Ga0307318_10118726	Not Available	900	Open in IMG/M
3300028771\|Ga0307320_10127986	Not Available	975	Open in IMG/M
3300028771\|Ga0307320_10266074	Not Available	677	Open in IMG/M
3300028778\|Ga0307288_10302887	Not Available	636	Open in IMG/M
3300028787\|Ga0307323_10142695	Not Available	864	Open in IMG/M
3300028791\|Ga0307290_10106059	Not Available	1025	Open in IMG/M
3300028791\|Ga0307290_10241812	Not Available	661	Open in IMG/M
3300028796\|Ga0307287_10018548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2403	Open in IMG/M
3300028796\|Ga0307287_10053730	Not Available	1484	Open in IMG/M
3300028796\|Ga0307287_10159712	Not Available	856	Open in IMG/M
3300028811\|Ga0307292_10268263	Not Available	711	Open in IMG/M
3300028811\|Ga0307292_10402321	Not Available	582	Open in IMG/M
3300028814\|Ga0307302_10008310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4641	Open in IMG/M
3300028814\|Ga0307302_10202249	Not Available	969	Open in IMG/M
3300028814\|Ga0307302_10318037	All Organisms → cellular organisms → Bacteria → Terrabacteria group	766	Open in IMG/M
3300028814\|Ga0307302_10336291	Not Available	744	Open in IMG/M
3300028875\|Ga0307289_10045846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1743	Open in IMG/M
3300028876\|Ga0307286_10408176	Not Available	510	Open in IMG/M
3300028881\|Ga0307277_10183584	Not Available	914	Open in IMG/M
3300031548\|Ga0307408_100782710	Not Available	864	Open in IMG/M
3300031731\|Ga0307405_10937540	Not Available	735	Open in IMG/M
3300031731\|Ga0307405_11996893	Not Available	519	Open in IMG/M
3300031824\|Ga0307413_10363094	Not Available	1122	Open in IMG/M
3300031824\|Ga0307413_11204282	Not Available	659	Open in IMG/M
3300031852\|Ga0307410_11584207	Not Available	578	Open in IMG/M
3300031901\|Ga0307406_10098365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1986	Open in IMG/M
3300031901\|Ga0307406_10148845	Not Available	1667	Open in IMG/M
3300031901\|Ga0307406_10572570	Not Available	927	Open in IMG/M
3300031901\|Ga0307406_11869072	Not Available	535	Open in IMG/M
3300031901\|Ga0307406_12152033	Not Available	500	Open in IMG/M
3300031903\|Ga0307407_10454306	Not Available	930	Open in IMG/M
3300031903\|Ga0307407_11330991	Not Available	564	Open in IMG/M
3300031911\|Ga0307412_10818849	Not Available	810	Open in IMG/M
3300031995\|Ga0307409_101184188	Not Available	787	Open in IMG/M
3300031995\|Ga0307409_101883812	Not Available	627	Open in IMG/M
3300031995\|Ga0307409_102500125	Not Available	545	Open in IMG/M
3300032002\|Ga0307416_100214854	Not Available	1838	Open in IMG/M
3300032002\|Ga0307416_101742001	Not Available	727	Open in IMG/M
3300032002\|Ga0307416_103417128	Not Available	531	Open in IMG/M
3300032002\|Ga0307416_103585208	Not Available	519	Open in IMG/M
3300032004\|Ga0307414_10092412	Not Available	2252	Open in IMG/M
3300032004\|Ga0307414_10537421	Not Available	1040	Open in IMG/M
3300032004\|Ga0307414_12232433	Not Available	511	Open in IMG/M
3300032005\|Ga0307411_10554831	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300032005\|Ga0307411_11650610	Not Available	592	Open in IMG/M
3300032126\|Ga0307415_100084867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter → Candidatus Competibacter denitrificans → Candidatus Competibacter denitrificans Run_A_D11	2273	Open in IMG/M
3300032126\|Ga0307415_100786451	Not Available	867	Open in IMG/M
3300032126\|Ga0307415_102481248	Not Available	510	Open in IMG/M
3300032159\|Ga0268251_10018278	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2048	Open in IMG/M
3300032159\|Ga0268251_10310272	Not Available	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.86%
Host-Associated	Host-Associated	37.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.29%
Plants	Host-Associated → Plants	37.14%
Aquatic	Environmental → Aquatic	8.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.48%
Sediment	Environmental → Aquatic → Sediment	7.62%
Phylloplane	Host-Associated → Plants → Phylloplane	4.76%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Roots	Host-Associated → Plants → Roots	0.95%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	30.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	30.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.62%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	27.62%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	17.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.71%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.95%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1076840772	3300000956	Soil	MYLLSQDPTQLAAPAASTLVADRLLSDPGSLVANMGELLLARSLTVAAVLLGAVVLNRLV
Ga0062590_1015599063	3300004157	Soil	MHLLSQGPIHPSGAAAVPLVAGGLLPDPGSMVASMGELLVTRSLKVAAVL
Ga0058697_100273181	3300005562	Agave	MHLLSQGPTQLAAAAALPLVAGGLLSNPGSLVAGMGELLLARSLKVAAVV
Ga0058697_101184812	3300005562	Agave	MHLLSQGPVPSSRATALPLVTGGLLHDPGSVVASMGE
Ga0058697_105176672	3300005562	Agave	LPLVAGGLLSDPGSVVAGMGELLVTRSLAVAAVVLGAVVLNRLIRWLLRRLVRGLEHRYIQQPLESLRAKTPRALLAST
Ga0081538_102034421	3300005981	Tabebuia Heterophylla Rhizosphere	MHLLSQDPVPTPRAAALPLVADGLLSDPGSVVASMGELLLARSLKVAAVVVGALVLNRLVRWLLRRLVR
Ga0075428_1019191501	3300006844	Populus Rhizosphere	MHLLSQGPTQLAGPAALPFVAGGLLSDPGSLVAGMGELLLARSLKVAAVLLGAVVLNRLVRWLLRRLVGGLEHRYIQQPLESLRAK
Ga0075424_1021514331	3300006904	Populus Rhizosphere	MHLLSPSPTQPPAPAALPLVAGGLLSDPGSVVAGMGELLLARSLKVAAVLLGAVVFNRLVRWLLRRLVRGLEHRSIQQPLESLRAK
Ga0126307_109986982	3300009789	Serpentine Soil	MHLLSHGPVHSPQATASTLVANGLLSDPGSVVAGMGELLLARSLKVAAVVLGAVVLNRLV
Ga0126313_101970013	3300009840	Serpentine Soil	MHLLSQGPTQLAAPAALPLVAGGLLPNPGSMVAGMGELLLARSLKVAAVVLGAVILNRLVRWLLRRLVRGLEHRSIQQPLESLR
Ga0126313_108925532	3300009840	Serpentine Soil	MHLLSQGPVHPPQATASMLVVDGLVSDPGSLVASMGELLLARSLKVAAV
Ga0126305_108723872	3300010036	Serpentine Soil	MHLLSQGPTQLTAPAASTLVAGGLLSDPGSLVASMGELLVARS
Ga0126305_109992291	3300010036	Serpentine Soil	MHLLSQGPTQLAAPAVLPLVAGGLLSNPDSLVAGMGELLLARSLKVAAVVLGAVV
Ga0126304_108616831	3300010037	Serpentine Soil	MHLLSQGPVPSPRAAALPLVAGGLLSDPGSMVELLLARSLKVAAVVLGAFVLNRLVRWLLRRVVGGLEQRFVQNRLESLRAK
Ga0126315_102246462	3300010038	Serpentine Soil	MHLLSQDSTQLAAPAALPLVVGGLLSDPGSLVASMGELLLARSLTVGAVVLGAVVLNRLVRWLLRRLVRGLEHRFVQ
Ga0126315_106501901	3300010038	Serpentine Soil	MHLLSQGPTQLAAPAALPLVAGGLLPNPGSMVAGMGELLLARSLKVAAVVLGAVILNRLVRWLLRRLVRGLEHRSIQQPLE
Ga0126308_109487581	3300010040	Serpentine Soil	MHLLNQGPTQLAGPAALPLVAGGLLSDPGSVVAGMGELLLARSLKVAAVVL
Ga0126312_104276682	3300010041	Serpentine Soil	MHLLSQGPTQLAGPAASTLVAGGLLSDPGSVVAGMGELLLARSLKV
Ga0126312_107056391	3300010041	Serpentine Soil	MHLLSQGPTQLAGPTASTLVADGLLSDMGSLVASMGELLLTRSLKVAAVLLGAVVLNRLVRWLLRRLVGG
Ga0126314_104931032	3300010042	Serpentine Soil	MHLLSQGPTQLAAPAALPLVAGGLLSNPDSLVAGMGELLLARSLKVAAVVLG
Ga0126314_112917912	3300010042	Serpentine Soil	MHLLSQGPTQLAGPAASTLVAGRLLSDPGSVVANMGELLLARSLKVAAVLLGA
Ga0126314_113324021	3300010042	Serpentine Soil	MHLLSQGPTQLAGPTASTLVADGLLSDMGSLVAGMGELLLGRSLKVAAVLLGAVVLNRLVRWLLRRLVGGLEHRF
Ga0126310_102117251	3300010044	Serpentine Soil	MHLLSQGPVHPPQAAASTLVAGGLLSDPGSMVELLLARSLEVAAVVLGAFVLNRLVRWLLRRVV
Ga0126310_108537071	3300010044	Serpentine Soil	MHLLSHGPVHSPQATASTLVANGLLSDPGSVVAGMGELLLARSLKVAAVLLGAVVLNRLVRWLL
Ga0126311_118631711	3300010045	Serpentine Soil	MHLLSQGPTQLAAPAALPLVAGGLLSDPGGLVASMGELLLTRSLKFA
Ga0127455_10146412	3300010132	Grasslands Soil	MHPLTVHPVHPFPAAASTLAAGGLLRDPGGLAAGVGEVLLVRSLKVAAVVLGAVVLNRLVRRLVRRLVRGLEHD
Ga0126306_107520821	3300010166	Serpentine Soil	MHLLSQGPVHPPQATASTLVAEGLLSDPGSLVASMGELLLARSLKVAAVVLGAVVLNRLVRWLL
Ga0190266_105474202	3300017965	Soil	MHLLSQGPVHPPQATALTLVAGGLLSDPGSVVAGMGELLLARSLKVAAVLLGAVVLVLRQDS
Ga0184621_102461311	3300018054	Groundwater Sediment	MHLLSQGPVHPPQATASTLVADGLLSDSGSLIASMGELLLARSLKVAAILLGAVVLNRLVRWLLRRLVGGLEHRFVQNRLESL
Ga0184640_101038392	3300018074	Groundwater Sediment	MHLLSQGPIPSPRAAALPLVAGGLLSDPGSWVAGMGELLVARSLKGAAVLLGAVVLNRLVRWLLRRIVGS
Ga0184609_100056671	3300018076	Groundwater Sediment	MHLLSQGPVPSPRAAALPLVAGGLLPDPGSVVAGMGELLLARSLTVAAVVLGAVVLNRLVRWLLRRLVGGLEYRFVQ
Ga0184612_103950281	3300018078	Groundwater Sediment	MHLLNHGPTQLAGPAASTLVAGRLLSDPGSLVASMGELLLARS
Ga0184625_101227312	3300018081	Groundwater Sediment	MHLLNHGPTQLAGPAASTLVAGRLLSDPGSLVASMGELLLARSLKVAAVLLGAVVLNRLVRWLLRRLVGGLEHRFV
Ga0184625_105815162	3300018081	Groundwater Sediment	MHLLSQGPTQLAAPAALPLVAGGLLSNPGSVVASMGELLVARSLKVAAVVLGAVVLTRLVRWL
Ga0193705_10926182	3300019869	Soil	MHLLSQGPVPSPRAAALPLVAGGLLSDSGSMVELLLARSLKVAGVLLGAVVLNRLVRWLLRRLVRGLEHRSIQQPLESLRA
Ga0193700_10138613	3300019873	Soil	MHLLSQGPIHPPQATASTLVADGLLSDPGSLVASMGELLLARSLTVAAVVLGAVVLNRLVRWLLRRLVGGLE
Ga0210381_100139101	3300021078	Groundwater Sediment	MHLLSQGPIHPPQATASTLVADGLLSDPGSLVASMGELLLARSLTVAAVVLGAVVLNRLVRWLLRRLVGGLEHRFVQNR
Ga0222623_101469781	3300022694	Groundwater Sediment	MHLLSQGPVHPPQATASTLVADGLLSDPGSVVASMGELLLARSLKVAAVVLGAVVLNRLV
Ga0222622_101876222	3300022756	Groundwater Sediment	MKGKDPLHAPAQQGPVPSPRAAALTLVIGGLLSDPGSVVAGIGELLVARSLKVAAVVLGAVVLNRLVRWLLRRLVRGLEHRSIQQPLESLRAKTP
Ga0209461_100878431	3300027750	Agave	MHLLSQGPVHPPQATASTLVADGLLSDPGSMVANMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLVGG
Ga0209814_100395172	3300027873	Populus Rhizosphere	MHLLSQGPTQLAAPAASPLVTGGLLSDPGSVGAGMGELLLTRSLKVAAVLLGAVILNRLVRWLLRRLV
Ga0307295_100676502	3300028708	Soil	MHLLSQGPTQLAAPATLPLVAGGLLSNPGSLVANMAELLLARSLKVAAVVLGAVVLNRLVRWLLRRIVGSLEHRSI
Ga0307293_100554032	3300028711	Soil	MKGKDPLHAPAQQGPVPSPRAAALTLVIGGLLSDPGSVVAGIGELLVARSLKVAAVVLGAVVLNRLVRWLLRRLVRGLEHRSIQQPLESLRAKT
Ga0307293_101660292	3300028711	Soil	MPLLSQGPVPSPRAAALPLVAAGLLSDPGGLVANMGELLVARSLKVAAVVLGAVVLNRLVRWLLRRLVGGLEHRFIQNRL
Ga0307293_103039071	3300028711	Soil	MHLLSQGPIHPPQATALTLVAGGLLSDPGGLVASMGELLLARSLTVAAVVLGAVVLNRLVRWLLRRLVGGLEHRFVQNRLESLRAKTP
Ga0307285_102168581	3300028712	Soil	MHLLSQGPVPSPRTAALPLVAGGLLSNPGSLVAGMGELLLARSLKVAAVLLGAVVLNRLVRWLLRRIVGSLEHRSIQQPLESLRAKT
Ga0307313_102150071	3300028715	Soil	MHLLSQGPIHPPQATASTLVADGLLSDPGSLVASMGELLLARSLTVAAVVLGAVVLNRLV
Ga0307311_100904551	3300028716	Soil	MHLLSQGPVHPPQATASTLVADGLLSDPGSLVASMGELLLAR
Ga0307298_100682882	3300028717	Soil	MHLLSQDPVPSPRTAALPLVAGGLLSDPGSWVASMGELLVARSLKVA
Ga0307317_100974851	3300028720	Soil	MHLLSQDPVPSPRTAALPLVAGGLLSDPGSWVASMGELLVARSLKVAAVVLGAVVLNRLVRWLLRRLVGGLE
Ga0307317_101791341	3300028720	Soil	MHLLSQGPVHPPQATASTLVADGLLSDPGSLIASMGELLLARSLKVA
Ga0307315_102020551	3300028721	Soil	MHLLSQGPVHPPQATASTLVADGLLSDPGSLVASMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLV
Ga0307319_101598372	3300028722	Soil	MHLLSQDPVPSPRTAALPLVAGGLLSNPGSVVAGMGELLVARSLKVAAVLLGAV
Ga0307318_100358331	3300028744	Soil	MHLLSQGPTQLAAPATLPLVAGGLLSNPGSLVANMAELLLARSLKVAAVVLGAVVLNRLVRWLLRRIVGSL
Ga0307318_101187261	3300028744	Soil	MHLLSQGPVHPPQAAALPLVADGLLSDPGSLVAGMGELLLARSLKVAAVLLGAFVLN
Ga0307320_101279862	3300028771	Soil	MHLLSQGPVHPPQATASTLVADGLLSDPGSLVASMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLVGGL
Ga0307320_102660741	3300028771	Soil	MHLLSQGPTQLAAPAALPLVAGGLLSNPDSLVANMGELLVARSLKVAAVVLGAVVLNRLVRWLLRRIVGSLEHLSIQQPLE
Ga0307288_103028871	3300028778	Soil	MHLLSQGPVHPPQATASTLVADGLLSDPGSVVAGMGELLVARSLKVAAVVLGAVVLNRLV
Ga0307323_101426951	3300028787	Soil	MHLLSQGPIHPPQATASTLVADGLLSDPGSLVASMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLVGGLEHRFVQNRLESL
Ga0307290_101060592	3300028791	Soil	MHLLSQGPVHPPQATASTLVADGLLSDPGSVVAGMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLVR
Ga0307290_102418121	3300028791	Soil	MHLLSQGPIHPPQATASTLVADGLLSDPGSLVASMGELLLARSLTVA
Ga0307287_100185483	3300028796	Soil	MKGKDPLHAPAQQGPVPSPRAAALTLVIGGLLSDPGSVVAGIGELLVARSLKVAAVLLGAVVLNR
Ga0307287_100537302	3300028796	Soil	MHLLSQDPVPSPRTAALPLVAGGLLSDPGSWVASMGELLV
Ga0307287_101597121	3300028796	Soil	MHLLSQGPVPSPRTAALPLVAGGLLSNPGSVVAGMGELLLARSLKVAAVLLGAVVLNRLVRWLLRRLVRGLEHRSIQQPLESLRA
Ga0307292_102682631	3300028811	Soil	MHLLSQGPIHPPQATALTLVAGGLLSDPGGLVASMGELLLARSLTVAAVVLGAVVLNRLVRWLLRRLVGGLEHRFVQNRL
Ga0307292_104023212	3300028811	Soil	MDLLSQGPSQLPGAAALPLVAGGLLSDPGSWVASMGELLLARSLKVAAVVLGAVVLNRLV
Ga0307302_100083101	3300028814	Soil	MPLLSQGPVPSPRAAALPLVAAGLLSDPGGLVANMGELLVARSLKVAAVVLGAVVLNRLVRWLLRR
Ga0307302_102022491	3300028814	Soil	MHLLSQGPVPSPRTAALPLVAGGLLSNPGSVVAGMGELLVARSLKVAAVLLGAVVLNRLVRWLLRRLVRGLEHRSIQQPL
Ga0307302_103180371	3300028814	Soil	MHLVSQGPLQPSGAAALPLVAGGLLSDPGSVVANLAELLVARSLKVAAVLLGAVVLNRLVRWLLR
Ga0307302_103362911	3300028814	Soil	MHLLSQGPVPSPRAAALPLVAGGLLSDPGSMGELLVARSLK
Ga0307312_101679342	3300028828	Soil	MKGKDPLHAPAQQGPVPSPRAAALTLVIGGLLSDPGSVVAGIGELLVARSLKVAAVVLGAVVLNRLVRWLLRRIVGSLEHRSIQQPLESLRAKTP
Ga0307289_100458461	3300028875	Soil	MHLLSQGPVPSPRTAALPLVAGGLLSNPGSVVAGMGELLVARSLKVAAVLLGAVV
Ga0307286_104081762	3300028876	Soil	MDLLSQGPSQLPGAAALPLVAGGLLSDPGSWVASMGELLLARSLKVAAV
Ga0307277_101835841	3300028881	Soil	MHLLSQGPVHPPQATASTLVADGLLSDPGSVVAGMGELLLARSLKVAAVVLGAVVLNR
Ga0307408_1007827101	3300031548	Rhizosphere	MHLLSQGPVPSPRAAALPLVAGGLLSDPGSMVELLLARSLKVAAVVLGAFVLNRLVRWLLRRV
Ga0307405_109375401	3300031731	Rhizosphere	MHLLSQDPTQLAGPAALPLVTGGLLSDPDSLVASMGELLLTRSLKVAAVLLGAVVLNRLVRWLLRRLVGGLEQ
Ga0307405_119968931	3300031731	Rhizosphere	MHLLSQGHVHPPQATASTLVTDGLLSDRGSVVASMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLVGGLEHRFVQNRLESLRAK
Ga0307413_103630942	3300031824	Rhizosphere	MKGKDPLHATAQQGPVQSPRAAAWTLVIGGLLSDPGSLVAGMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLVGGLEHRFVQNRLESLRA
Ga0307413_112042822	3300031824	Rhizosphere	MHLLSQGPTQLAAPAALPLVAGGLLSNPDSLVAGMGELLLAR
Ga0307410_115842071	3300031852	Rhizosphere	MHLLSQGPTQLTAPAALPLVAGGLLSNPGSVVAGMGELLLARSLKVAAVLLGAVVLNRLVRW
Ga0307406_100983651	3300031901	Rhizosphere	MHLLSQGPVHPPQATASPLVADGLLSDPGSMGELLLARSLKVAAVVVGAVVLNRLVRWLLRRLVGGLEQRFVQN
Ga0307406_101488452	3300031901	Rhizosphere	MHLLSQGPVPSPRAAALPLVAGGLLSDPGSMVELLLARSLEVAAVVLGAFVLNRLVRWLLRR
Ga0307406_105725701	3300031901	Rhizosphere	MHLLSQGPTQLAGAAALPLVAGGLLSDPGSVVAGMGELLLARSLKVAAVLLGAVVLNRLVRWLL
Ga0307406_118690721	3300031901	Rhizosphere	MHLLSPSPTQLAAPAALPLVAGGLLSNPDSLVAGMGELLLARSLKVAA
Ga0307406_121520331	3300031901	Rhizosphere	MHLLSQGPTQLAAPAALPLVAGGLLPNPGSMVAGMGELLLARSLKVAAVLLGAVILNRLVRWLL
Ga0307407_104543061	3300031903	Rhizosphere	MHLLSQGPTQVAALAALPLVAGGLLSNPDSLVAGMGELLLARSLKVAA
Ga0307407_113309911	3300031903	Rhizosphere	MHLLSQGAIPSPRPAASMLVAGGLLSDPGSIVASMGELLLARSLKVAAVVLGAVVLNRLIRWLLRRLVGGLEHRYIQ
Ga0307412_108188491	3300031911	Rhizosphere	MHLLSQGPTQLTAPAALPLVAGGMLSDPGSLVAGMGELLLARSFKVAAVLL
Ga0307409_1011841881	3300031995	Rhizosphere	MHLLSQGPTQLAGLAALPLVAGGLLSNPGSLVAGMGELLLARSLKVAA
Ga0307409_1018838121	3300031995	Rhizosphere	MHLLSQGPTQLAAPAALPLVAGGLLSNPDSLVAGMGELLLARSLKVAAVVLGAVVLNRLVRWLLRRLV
Ga0307409_1025001251	3300031995	Rhizosphere	MHLLSQGPVHPPQATASPLVAGGLLSDPGSMVELLVARSLKVAAVVVGAFVLNRLVRWLLRRLVGGLEQRFVQQPLES
Ga0307416_1002148543	3300032002	Rhizosphere	MKGKDPLHATAQQGPVQSPRAAAWTLVIGGLLSDPGSLVAGMGELLLARSLKVAAVVLGAVVLNRLVRW
Ga0307416_1017420011	3300032002	Rhizosphere	MHLLSQGPTQLAAPAALPLVAGGLLSNPDSLVAGMGELLLARSLKVAAVVL
Ga0307416_1034171281	3300032002	Rhizosphere	MHLLNQGPTQLAGPAALPLVAGRLLSDPGSVVAGMGELLVARSLKVAAVL
Ga0307416_1035852081	3300032002	Rhizosphere	MHLLNHGPTQLAGPAASTLVAGRLLSDPGSLVASMGELLLARSLKVAAVLLGAVVLNRLVRWLLRRLVGGLEHR
Ga0307414_100924121	3300032004	Rhizosphere	MHLLSQGPTQLATPAALPLVADGLLSDMGSLVAGMGELLLTRSLKVAAV
Ga0307414_105374212	3300032004	Rhizosphere	MHLLSQGPTQLAAPAALPLVAGGLLPNPGSMVAGMGELLLARSLKVAAVVLGAVILNR
Ga0307414_122324331	3300032004	Rhizosphere	MHLLSQGPVHPPQATASPLVAGGLLSDPGSMVELLVARSLKVAAVVVGAF
Ga0307411_105548311	3300032005	Rhizosphere	MHLLNQGPTQLAGPAALPLVAGRLLSDPGSVVAGMGELLLARSLKVAAVVLGAV
Ga0307411_116506101	3300032005	Rhizosphere	MHLLSQGPTQVAALAALPLVAGGLLSNPDSLVAGMGELLLARSLKVAAVVLGAVV
Ga0307415_1000848671	3300032126	Rhizosphere	MHLLSQGPVPSPRAAALPLVAGGLLSDPGSIVELLLARSLEVAAVVLGAFVLNRLVR
Ga0307415_1007864511	3300032126	Rhizosphere	MHLLSPSPTQLAAPAALPLVAGGLLNPDSLVAGMGELLLARSLKVAAVLLGAVVLNRLVRWLL
Ga0307415_1024812481	3300032126	Rhizosphere	MHLLSQGPTQLATPAALPLVADGLLSDMGSLVAGMGELLLTRSLKVAA
Ga0268251_100182781	3300032159	Agave	MHLLSQGPTQLAAAAALPLVAGGLLSNPGSLVAGMGELLLGRSLAVAAVL
Ga0268251_103102721	3300032159	Agave	MHLLSQGPVHPPQATASALVAGGLLSDPGSVVAGMGELLLARSLKVAAVVLGAVALNRLVRWVLRRLVGGLE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095098

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences