Metagenome / Metatranscriptome Family F094819

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094819
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	88 residues
Representative Sequence	MPTTESTTEQANQNHDRDRDRELVRAITDALVLAVGKRAAQQALRRARTKAGRTAQRRAVYAAAHLAGYSALLGYIWRQRRTSHHSAA
Number of Associated Samples	90
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.90 %
% of genes near scaffold ends (potentially truncated)	23.81 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.238 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.55% β-sheet: 0.00% Coil/Unstructured: 28.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03729	DUF308	10.48
PF04972	BON	4.76
PF03706	LPG_synthase_TM	4.76
PF13191	AAA_16	2.86
PF00196	GerE	1.90
PF01925	TauE	0.95
PF06210	DUF1003	0.95
PF00232	Glyco_hydro_1	0.95
PF02775	TPP_enzyme_C	0.95
PF05977	MFS_3	0.95
PF13701	DDE_Tnp_1_4	0.95
PF08450	SGL	0.95
PF00248	Aldo_ket_red	0.95
PF05988	DUF899	0.95
PF01594	AI-2E_transport	0.95
PF00512	HisKA	0.95
PF02518	HATPase_c	0.95
PF01988	VIT1	0.95
PF00171	Aldedh	0.95
PF13193	AMP-binding_C	0.95
PF07366	SnoaL	0.95
PF13411	MerR_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	10.48
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	4.76
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.95
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.95
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.95
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.95
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.95
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.95
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.95
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.95
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.95
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.95
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.95
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.95
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.05 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.86 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.90 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.95 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.95 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.95 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.95 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.95 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	0.95 %
Phytoactinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora	0.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.95 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.95 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.95 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.95 %
Phytoactinopolyspora mesophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora → Phytoactinopolyspora mesophila	0.95 %
Rhodococcus yunnanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus yunnanensis	0.95 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.95 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100404709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1243	Open in IMG/M
3300003219\|JGI26341J46601_10007054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3688	Open in IMG/M
3300004080\|Ga0062385_10101296	Not Available	1394	Open in IMG/M
3300004091\|Ga0062387_100847949	Not Available	686	Open in IMG/M
3300004092\|Ga0062389_103203831	Not Available	613	Open in IMG/M
3300004479\|Ga0062595_100136855	Not Available	1394	Open in IMG/M
3300004635\|Ga0062388_100253799	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300005332\|Ga0066388_101294380	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300005332\|Ga0066388_102968528	Not Available	867	Open in IMG/M
3300005332\|Ga0066388_104463015	Not Available	713	Open in IMG/M
3300005434\|Ga0070709_10583032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300005435\|Ga0070714_100473385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1192	Open in IMG/M
3300005435\|Ga0070714_100910713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	854	Open in IMG/M
3300005435\|Ga0070714_101087364	Not Available	779	Open in IMG/M
3300005437\|Ga0070710_11296007	Not Available	541	Open in IMG/M
3300005471\|Ga0070698_100004544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15251	Open in IMG/M
3300005537\|Ga0070730_10569101	Not Available	725	Open in IMG/M
3300005538\|Ga0070731_10015648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5380	Open in IMG/M
3300009089\|Ga0099828_11073922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300009090\|Ga0099827_10022831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4379	Open in IMG/M
3300009698\|Ga0116216_10283661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300009700\|Ga0116217_10508999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Phytoactinopolyspora → Phytoactinopolyspora mesophila	756	Open in IMG/M
3300010339\|Ga0074046_10477774	Not Available	746	Open in IMG/M
3300010341\|Ga0074045_10139873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus yunnanensis	1650	Open in IMG/M
3300010358\|Ga0126370_10961859	Not Available	776	Open in IMG/M
3300010360\|Ga0126372_11721430	Not Available	669	Open in IMG/M
3300010366\|Ga0126379_12431577	Not Available	623	Open in IMG/M
3300010376\|Ga0126381_101449607	Not Available	992	Open in IMG/M
3300010379\|Ga0136449_101803089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	915	Open in IMG/M
3300010379\|Ga0136449_103078789	Not Available	648	Open in IMG/M
3300010867\|Ga0126347_1291449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300010876\|Ga0126361_11195875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1380	Open in IMG/M
3300010880\|Ga0126350_10925204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4516	Open in IMG/M
3300010880\|Ga0126350_11227690	Not Available	772	Open in IMG/M
3300011271\|Ga0137393_10820920	Not Available	794	Open in IMG/M
3300012096\|Ga0137389_10135521	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300012189\|Ga0137388_10643309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300012189\|Ga0137388_11658218	Not Available	574	Open in IMG/M
3300012207\|Ga0137381_11733913	Not Available	514	Open in IMG/M
3300012958\|Ga0164299_10718046	Not Available	701	Open in IMG/M
3300016270\|Ga0182036_10624909	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300016422\|Ga0182039_11384896	Not Available	639	Open in IMG/M
3300017821\|Ga0187812_1085078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1040	Open in IMG/M
3300017823\|Ga0187818_10013517	Not Available	3487	Open in IMG/M
3300017924\|Ga0187820_1182600	Not Available	647	Open in IMG/M
3300017926\|Ga0187807_1103546	Not Available	895	Open in IMG/M
3300017926\|Ga0187807_1248146	Not Available	583	Open in IMG/M
3300017928\|Ga0187806_1000997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7109	Open in IMG/M
3300017937\|Ga0187809_10000488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20957	Open in IMG/M
3300017942\|Ga0187808_10041474	Not Available	1928	Open in IMG/M
3300017943\|Ga0187819_10003142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8834	Open in IMG/M
3300017970\|Ga0187783_10545361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300017974\|Ga0187777_11337912	Not Available	527	Open in IMG/M
3300017975\|Ga0187782_10334921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1144	Open in IMG/M
3300018012\|Ga0187810_10016735	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300018046\|Ga0187851_10080907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2048	Open in IMG/M
3300020580\|Ga0210403_11377241	Not Available	535	Open in IMG/M
3300020581\|Ga0210399_10785401	Not Available	778	Open in IMG/M
3300020583\|Ga0210401_10469741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1120	Open in IMG/M
3300021374\|Ga0213881_10228122	Not Available	825	Open in IMG/M
3300021377\|Ga0213874_10080197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1056	Open in IMG/M
3300021477\|Ga0210398_11531531	Not Available	518	Open in IMG/M
3300021560\|Ga0126371_10173907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2232	Open in IMG/M
3300021560\|Ga0126371_13833582	Not Available	507	Open in IMG/M
3300025929\|Ga0207664_10318947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1371	Open in IMG/M
3300025929\|Ga0207664_11000840	Not Available	749	Open in IMG/M
3300025939\|Ga0207665_10254051	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300027698\|Ga0209446_1050606	Not Available	1050	Open in IMG/M
3300027812\|Ga0209656_10003914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9610	Open in IMG/M
3300027825\|Ga0209039_10222647	Not Available	761	Open in IMG/M
3300027829\|Ga0209773_10003670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5629	Open in IMG/M
3300027867\|Ga0209167_10730080	Not Available	541	Open in IMG/M
3300027869\|Ga0209579_10093344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1594	Open in IMG/M
3300027882\|Ga0209590_10312413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300027895\|Ga0209624_10197229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1336	Open in IMG/M
3300029943\|Ga0311340_10181107	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300030013\|Ga0302178_10010596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	5985	Open in IMG/M
3300030730\|Ga0307482_1003790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2265	Open in IMG/M
3300030730\|Ga0307482_1029392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1214	Open in IMG/M
3300031543\|Ga0318516_10407712	Not Available	783	Open in IMG/M
3300031561\|Ga0318528_10054327	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300031561\|Ga0318528_10457958	Not Available	685	Open in IMG/M
3300031590\|Ga0307483_1016941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	689	Open in IMG/M
3300031708\|Ga0310686_110506281	Not Available	689	Open in IMG/M
3300031718\|Ga0307474_10128734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1903	Open in IMG/M
3300031723\|Ga0318493_10521180	Not Available	658	Open in IMG/M
3300031736\|Ga0318501_10032172	All Organisms → cellular organisms → Bacteria	2330	Open in IMG/M
3300031763\|Ga0318537_10388094	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300031781\|Ga0318547_10334843	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300031821\|Ga0318567_10688157	Not Available	580	Open in IMG/M
3300031879\|Ga0306919_10335858	Not Available	1152	Open in IMG/M
3300031896\|Ga0318551_10675904	Not Available	598	Open in IMG/M
3300032008\|Ga0318562_10382230	Not Available	819	Open in IMG/M
3300032067\|Ga0318524_10434594	All Organisms → cellular organisms → Bacteria → Terrabacteria group	686	Open in IMG/M
3300032094\|Ga0318540_10433700	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300032160\|Ga0311301_10389056	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300032160\|Ga0311301_11263215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300032160\|Ga0311301_12127588	Not Available	648	Open in IMG/M
3300032180\|Ga0307471_103777686	Not Available	536	Open in IMG/M
3300032205\|Ga0307472_101221115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	719	Open in IMG/M
3300032261\|Ga0306920_100728711	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300032261\|Ga0306920_104460916	Not Available	501	Open in IMG/M
3300032895\|Ga0335074_10608218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1088	Open in IMG/M
3300032896\|Ga0335075_10489520	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300033134\|Ga0335073_11741130	Not Available	586	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	19.05%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.14%
Freshwater	Environmental → Aquatic → Freshwater	19.05%
Peat	Environmental → Terrestrial → Peat	1.90%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.05%
Loam	Environmental → Terrestrial → Soil → Loam	13.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.52%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.76%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.90%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.95%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1004047092	3300002245	Forest Soil	MKTADSAPDTASTATKPDHDRELVRAITDALALAVGKRAAHQALQHARRRHHADAQRRALHAAAHLAGYSALIGYIWRQRRTSHAA*
JGI26341J46601_100070546	3300003219	Bog Forest Soil	MAAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHQALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA*
Ga0062385_101012961	3300004080	Bog Forest Soil	MGAASIAVNSSIPNGQRHMPSHKERRAMAAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHQALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA*
Ga0062387_1008479492	3300004091	Bog Forest Soil	MPTTKSTTEQADQNHNRDRELVRAITDALVLVVGKRSAHQAVRRAQAKAGRTAQRRAVHAAAHLAGYSALLSYIWRQRRASHHSAA*
Ga0062389_1032038311	3300004092	Bog Forest Soil	MPTTESTTDQAEKNQNRDHNRDRDRELVRAITDALILAVGKRSAHQAVRRAQAKAGRTAQRRAVHAAAHLAGYSALLGYIWRQRRASHHSAA*
Ga0062595_1001368551	3300004479	Soil	MKTTESAAESTAAQPNHDHERDRELVRAITDALVLAVGKRAAHQAVRHARRQHHENGQRRAMELRALRTAAHLAGYSALIGY
Ga0062388_1002537991	3300004635	Bog Forest Soil	MPTTESTTEQAEKNHNRDRELVRAITDALILAVGKRSAHQAVRRAQAKAGRTAQRRAVHAAAHLAGYSALLGYIWRQRRASHHSAA*
Ga0066388_1012943802	3300005332	Tropical Forest Soil	MNAESSTAQTDRSHDRDRDRELVRAITDALVLAVGKRAAHQALRHAHDKAHRTAQHRVARAAAHMAGYSALLGYIWHQRRTSHQSAA*
Ga0066388_1029685282	3300005332	Tropical Forest Soil	MTAESSAGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRIVRAAAHLAGYSALLGYIWRQRQTSRRSAA*
Ga0066388_1044630152	3300005332	Tropical Forest Soil	MTSQESASAQPDHDRDRELVRAITDALVLAAGKRAAHQALRRARSQHHRAAQWRALATAAHVAGYSALIGYIWRHRHSQHAAA*
Ga0070709_105830322	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKTTESAAESTAAQPDHGHDRDRELVRAITDALVLAVGKRAAHQAVRHARRQHHENGQRRAVELRALRAAAHLAGYSALIGYIWRQRRTAQHAA*
Ga0070714_1004733852	3300005435	Agricultural Soil	MKTTESTAESTAAQPDHGHDRDRELVRAITDALVLAVGKRAAHQAVRHARRQHHENGQRRAVELRALRAAAHLAGYSALIGYIWRQRRTAQHAA*
Ga0070714_1009107132	3300005435	Agricultural Soil	MPTTESTPTQAGQNHDRDRDRDREMVRAITEALVLAVGKRAAHQELRRVRAQAGRGAQRRAVRAAAHLAGYSALLGYIWRHRRASHQSGA*
Ga0070714_1010873641	3300005435	Agricultural Soil	MTTTESAAQPDQGHEHDRDRELVHAITDALVLAVGKRAAHRALRHARSRHHRTVQRRAIGAAAHLAGYSALIGYIWHQRRRAVPS*
Ga0070710_112960072	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTTESTAESTAAQPDHGHDRDRELVRAITDALVLAVGKRAAHQAVRHARRQHHENGQRRAVELRALRAAAHLAGYSALIGYIWRQRRTAQHA
Ga0070698_1000045442	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTTTESIASQANQTHDRDRDRDRELVRAITDALILAVGKRAAHQAFRRARSQHGVQGRAVRAAAHLAGYSALLGYIWHHRQTSHQSAA*
Ga0070730_105691011	3300005537	Surface Soil	MPTTESTPTHAGQNHDRDRDRDREMVRAITEALVLAVGKRAAHQELRRVRAQAGRGAQRRAVRAAAHLAGYSALVGYIWHHRRASHQSGA*
Ga0070731_100156482	3300005538	Surface Soil	MPNIESTTKQPGQNHDRDRDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTAQRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA*
Ga0099828_110739221	3300009089	Vadose Zone Soil	AATQAGHDGAHDQDRELVRAITDALVLAVGKRAAHQALRHARRRHHRNDQRRALQAAAHLAGYSALIGYIWRQRRTSQHAA*
Ga0099827_100228312	3300009090	Vadose Zone Soil	MNTTESAAAQPERTRDRDRELVRAMTDALVLAVGKRAAHQALRHARRQHHRNGQRRALQAAAHVAGYSALIGYIWRQRRTSHQAAA*
Ga0116216_102836612	3300009698	Peatlands Soil	MTGSTTEQTGQTRDRDRDRELVRAITDALVLAAGNRAAHQALRRAQPKVHPTAQHRAVQTAAHLAGYSALLGYIWHQRRTSHQSAA*
Ga0116217_105089991	3300009700	Peatlands Soil	AMTAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHRALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHLRRTSHHSAA*
Ga0074046_104777741	3300010339	Bog Forest Soil	MAAKSTTRQTDQNHDRDQDRELVRAITDALILAVGKRTAHQALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA*
Ga0074045_101398733	3300010341	Bog Forest Soil	MGAASIAVNSSIPNGQRHMPSHKERHAMAAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHQALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA*
Ga0126370_109618591	3300010358	Tropical Forest Soil	MTAESSAGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRVVRAAAHLAGYSALLGYIWRQRQTSRRSAA*
Ga0126372_117214301	3300010360	Tropical Forest Soil	MTTTESAAQPDQGHEHDRDRELVHAITDALVLAVGKRAAHRALRHARSRHHQAAQRRAIGTAAHLAGYSALIGYIWHQRRRAVPS*
Ga0126379_124315772	3300010366	Tropical Forest Soil	MITTESAAQPDQGHEHDRDRELVHAITDALVLAVGKRAAHRALRHARSRHHQAAQRRAIGAAAHLVGYSALIGYIWHQRRRAVPS*
Ga0126381_1014496071	3300010376	Tropical Forest Soil	SSTAQTDRSHDRDRDRELVRAITDALVLAVGKRAAHQALRHAHDKAHRTAQHRVARAAAHMAGYSALLGYIWHQRRTSHQSAA*
Ga0136449_1018030891	3300010379	Peatlands Soil	MTGSTTEQTGQTRDRDRDRELVRAITDALVLAAGNRAAHQALRRAQAKVHPTAQHRAVQTAAHLAGYSALLGYIWHLRRTSHHSAA*
Ga0136449_1030787892	3300010379	Peatlands Soil	MGAASIAVNSSIPNGQRHMPSHKERHAMTAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHRALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA*
Ga0126347_12914491	3300010867	Boreal Forest Soil	MKTTESAPDTASTATKPDHDRELVRAITDALALAVGKRAAHQALRHARSRHHADAQRRALHAAAHLAGYTALIGYIWRQRRTSHAT*
Ga0126361_111958751	3300010876	Boreal Forest Soil	AMKITESAPDTASTATKPDHDRELVRAITDALTLAVGKRAAHQALQHARRRHHADAQRRALHAAAHLAGYSALIGYIWRQRRTSHAA*
Ga0126350_109252041	3300010880	Boreal Forest Soil	MKTTDSAPDTASTAAKPDHDRELVRAITDALALAVGKRAAHQALQHARRRQHADAQRRALHAAAHLAGYTALLGYIWRQRRTSHTT*
Ga0126350_112276902	3300010880	Boreal Forest Soil	MPTTESTTTEQADQNQDHDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTTQRRAVHAAAHLAGYSALLGYIWHQRRTSRKPGA*
Ga0137393_108209202	3300011271	Vadose Zone Soil	MKTTKSAPESAATQAGHDGAHDHDRELVRAITDALVLAVGKRAAHQALRHARRRHHRNDQRRALQAAAHLAGYSALIGYIWRQRRTSQHAA*
Ga0137389_101355213	3300012096	Vadose Zone Soil	MNTTESAAAQPEQTRDRDRELVRAMTDALVLAVGKRAAHQALRHARRQHHRNGQRRALHAAAHLAGYSALIGYIWRQRRTSHQAAA*
Ga0137388_106433091	3300012189	Vadose Zone Soil	MNTTESAAAQPEQTRDRDRELVRAMTDALVLAVGKRAAHQALRHARRQHHRNGQRRALQAAAHVAGYSALIGYIWRQRRTSHQAAA*
Ga0137388_116582181	3300012189	Vadose Zone Soil	ESAATQAGHDGAHDQDRELVRAITDALVLAVGKRAAHQALRHARRRHHRNDQRRALQAAAHLAGYSALIGYIWRQRRTSQHAA*
Ga0137381_117339131	3300012207	Vadose Zone Soil	MNTTESAAAQPERTRDRDRELVRAMTDALVLAVGKRAAHQALRHARRQHYRNGQRRALQAAAHVAGYSALIGYIWRQRRTSHQAAA*
Ga0164299_107180461	3300012958	Soil	MKTTESAAESTAAQPDHDHDRDRELVRAITDALVLAVGKRAAHQAVRHARRQHRENGQRRAVELRALRAAAHLAGYSALIGYIWRQRRTAQHAA*
Ga0182036_106249091	3300016270	Soil	NHDHDRDRELVRALTNALVLAVGKRAARQALRHARAKAHPTAQHRVARAAAHLAGYSALLGYIWHQRRTSHQSAA
Ga0182039_113848962	3300016422	Soil	LTLTVRLMITGFTTAQTDQNHDHDRDRELVRALTNALVLAVGKRAARQALRHARAKAHPTAQHRVARAAAHLAGYSALLGYIWHQRRTSHQSAA
Ga0187812_10850782	3300017821	Freshwater Sediment	MPNIESTTKQPAQNHDRDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTTRRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA
Ga0187818_100135173	3300017823	Freshwater Sediment	MPNIESTTKQPAQNHDRDRDREMVRAITDALVLAVGKRAAHQELRRARAKAARTTRRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA
Ga0187820_11826002	3300017924	Freshwater Sediment	MPTTESTSTEQPDQNHDRDRDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTTRRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA
Ga0187807_11035462	3300017926	Freshwater Sediment	MSTAESTITEQADQHHDRDRDRELVRAITDALVLAVGKRAAHETFRRVRARSGRAPQRRAIHAAAHLVGYSALVGYIWHQRRTSHNSAV
Ga0187807_12481461	3300017926	Freshwater Sediment	MNAESSTGQTDRSHDRDRDRELARAITDALVLAVGKRAAHQALRHARAKAHPTAQHRVARAAAHLAGYSAL
Ga0187806_10009972	3300017928	Freshwater Sediment	MPNIESTTKQPAQNHDRDRDREMVRAITDALVLAVGKRAAHQELRRAQAKAGRTTRRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA
Ga0187809_100004883	3300017937	Freshwater Sediment	MSTAESTITEQADQHHDRDRDRELVRAITDALVLAVGKRAAHETFRRVRARSGRAPQRRAIHAAAHLVGYSALVGYIWHQRRTSHNSAA
Ga0187808_100414743	3300017942	Freshwater Sediment	MSTAESTITEQADQHHDRDRDRELVRAITDALVLSVGKRAAHETFRRVRARSGRAPQRRAIHAAAHLVGYSALVGYIWHQRRTSHNSAA
Ga0187819_100031421	3300017943	Freshwater Sediment	MPNIESTTKQPAQNHDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTTRRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA
Ga0187783_105453611	3300017970	Tropical Peatland	NESAAKQADHNRDHDRDRDRELVRAITDALVLAVGKRAAHQTLRRAHGNAGRTAQRRAAHAAAHVAGYSALLGYIWHQRRTSHHSAA
Ga0187777_113379121	3300017974	Tropical Peatland	MNAESSTAQTDRSHDRDRDRELVRAITDALVLAVGKRAAHQALRHAHDKAHRTAQHRVARAAAHMAGYSALLGYIWHQRRTSHQSAA
Ga0187782_103349212	3300017975	Tropical Peatland	MPTNESAAKQADHNRDHDRDRDRELVRAITDALVLAVGKRAAHQTLRRAHGNAGRTAQRRAAHAAAHVAGYSALLGYIWHQRRTSHHSAA
Ga0187810_100167355	3300018012	Freshwater Sediment	MPNIESTTKQPAQNHDRDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTTRRRAVHAAAHLAGYSALLGYIWHRRRTA
Ga0187851_100809071	3300018046	Peatland	MTAKSTTRQTGQDHDRDRDRELVRAITDALILAVGKRTAHQALRRAQAEAQPTAWHKAVRAAGHLAGYSALLGYLWHQRRTSHQSAA
Ga0210403_113772411	3300020580	Soil	ERYAMPTTESTTEQANQNHDRDRDRELVRAITDALVLAVGKRAAQQALRRARTKAGRTAQRRAVYAAAHLAGYSALLGYIWRQRRTSHHSAA
Ga0210399_107854011	3300020581	Soil	MPTTESSTTEQADQHHDRDRELVRAITDALVLAVGKRAAHETLRRVRARSGHAAQRRAVHAAAHLAGYGALVGYIWRQR
Ga0210401_104697414	3300020583	Soil	MPTTESTTEQANQNHDRDRDRELVRAITDALVLAVGKRAAQQALRRARTKAGRTAQRRAVYAAAHLAGYSALLGYIWRQRRTSHHSAA
Ga0213881_102281221	3300021374	Exposed Rock	ESTTSKEDRTRDRDRDRELVRAITDALALAVGKRAAHQALRRARARTDASLQRRAFRAAAHLAGYSVLLGYIWHQRRTSHHSAV
Ga0213874_100801971	3300021377	Plant Roots	MTITESTTSKEGRTRDRDRDRELVRAITDALALAVGKRAAHQALRRARARTDASLQRRAFRAAAHLAGYSVLLGYI
Ga0210398_115315312	3300021477	Soil	MTAKSTTGQTGQNHDRDRDRELVRAITDALILAVGKRTAHQALRRAQAKAQSTAWHRTISAAGHLAGYSALLGYIWHQRRTSHQSAA
Ga0126371_101739072	3300021560	Tropical Forest Soil	MITTESAAQPDQGHEHNRDRELVLAITDALVLAVGRRAAHRALRHARSRHHQAAQRRAIGAAAHLAGYSALIGYIWHQRRRAVPS
Ga0126371_138335821	3300021560	Tropical Forest Soil	MITTESAAQPDQGHEHDRDRELVHAITDALVLAVGKRAAHRALRHSRSRHHQAAQRRAIGTAAHLAGYSALIGYIWHQRRRAVPS
Ga0207664_103189471	3300025929	Agricultural Soil	MTTTESAAQPDQGHEHDRDRELVHAITDALVLAVGKRAAHRALRHARSRHHRTVQRRAIGAAAHLAGYSALIGYIWHQRRRAVPS
Ga0207664_110008402	3300025929	Agricultural Soil	MKTTESTAESTAAQPDHGHDRDRELVRAITDALVLAVGKRAAHQAVRHARRQHHENGQRRAVELRALRAAAHLAGYSALIGYIWRQRRTAQHAA
Ga0207665_102540512	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKTTESAAESTAAQPNHDHDRDRELVRAITDALVLAVGKRAAHQAVRHARRQHHENGQRRAVELRALRAAAHLAGYSALIGYIWRQRRTAQHAA
Ga0209446_10506062	3300027698	Bog Forest Soil	MGAASIAVNSSIPNGQRHMPSHKERRAMAAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHQALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA
Ga0209656_100039149	3300027812	Bog Forest Soil	MAAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHQALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA
Ga0209039_102226472	3300027825	Bog Forest Soil	PSHKERHAMAAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHQALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA
Ga0209773_100036703	3300027829	Bog Forest Soil	MPTTKSTTEQADQNHNRDRELVRAITDALVLVVGKRSAHQAVRRAQAKAGRTAQRRAVHAAAHLAGYSALLSYIWRQRRASHHSAA
Ga0209167_107300801	3300027867	Surface Soil	MPNIESTTKQPGQNHDRDRDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTTRRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA
Ga0209579_100933442	3300027869	Surface Soil	MPNIESTTKQPGQNHDRDRDRDREMVRAITDALVLAVGKRAAHQELRRARAKAGRTAQRRAVHAAAHLAGYSALLGYIWHRRRTAHQPGA
Ga0209590_103124132	3300027882	Vadose Zone Soil	MNTTESAAAQPERTRDRDRELVRAMTDALVLAVGKRAAHQALRHARRQHHRNGQRRALQAAAHVAGYSALIGYIWRQRRTSHQAAA
Ga0209624_101972292	3300027895	Forest Soil	MKSTDSAPDTASTAAKPDHDRELVRAITDALALAVGKRAAHQALQHARRRHRADAQRRALHAAAHLAGYSALIGYIWRQRRTSHAA
Ga0311340_101811072	3300029943	Palsa	MAGRGRRQVPARCERHVMPTTESTTEQADKNHNRDRDRELVRAITDALILAVGKRSAHQAVRRAQAKAGRTAQRRALHAAAHLAGYSALLGYIWRQRRAAHHSAA
Ga0302178_100105967	3300030013	Palsa	MAGRGRRQVPARCERHVMPTTESTTEQADKNHNRDRDRELVRAITDALILAVGKRSAHQALRRAQAKAGRTAQRRALHAAAHLAGYSALLGYIWRQRRAAHHSAA
Ga0307482_10037902	3300030730	Hardwood Forest Soil	MRTTESVRETASEPATAQPDRDRELVRAITDALVLAVGKRAAHQALRHARRRHHADVHRRTLHAAAHLAGYSALIGYIWRQRRTSHAA
Ga0307482_10293923	3300030730	Hardwood Forest Soil	MPTTEQADQNHDRDRDRELVRAITDALVLAVGKRAAQQVLRRARAKAGRTAQRRAVYAAAHLAGYSALLGYIWRQRRTSHHSAA
Ga0318516_104077121	3300031543	Soil	MTTTESTTSQAGQAHDRDRELVRAITDALVLAVGKQTAHKVLRRARAKSDGTAQHRAMRAAAHLAGYTALLGYIWHQRRTSHQPAA
Ga0318528_100543272	3300031561	Soil	MNTTKSAAAQPDQTRDRDRELVRAITDALVLAVGKRAAHQALRHARRQHHRNGQRRALQAAAHLAGYSALIGYIWRQRRASHQAA
Ga0318528_104579583	3300031561	Soil	RYTMTAESSAGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRVVRAAAHLAGYSALLGYIWRQRQTSRPSAA
Ga0307483_10169412	3300031590	Hardwood Forest Soil	MRTTESVRETASEPATAQPDRDRELVRAITDALVLAVGQRAARQALRRARGRAHLPAPHRAVRAAAHVAGYGTLLSYIWHQRRAAHHPAA
Ga0310686_1105062811	3300031708	Soil	MPTTEPTATEQADHSHDRDRDRELVRAITDALVLAVGKRAAHQTLRRARARSGRAAQRRAVRAAAHVAGYSALLGYIWRQRRTSHNSAA
Ga0307474_101287342	3300031718	Hardwood Forest Soil	MPTTEQADQNHDRDRDRDRELVRAITDALVLAVGKRAAQQVLRRARAKAGRTAQRRAVYAAAHLAGYSALLGYIWRQRRTSHHSAA
Ga0318493_105211801	3300031723	Soil	MTAESSAGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRVVRAAAHLAGYSALLG
Ga0318501_100321723	3300031736	Soil	MTAESSTGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRVVRAAAHLAGYSALLGYIWRQRQTSRPSAA
Ga0318537_103880942	3300031763	Soil	MTAESSAGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRVVRAAAHLAGYSA
Ga0318547_103348432	3300031781	Soil	MNAESSTAKTDRSHDRDRDRELVRAITDALVLAVGKRAAHQALRHAHDRAHRTAQHRVARAAAHMAGYSALLGYIWHQRRTSHQSAA
Ga0318567_106881573	3300031821	Soil	HDHGFTTAQTDQNHDHDRDRELVRALTNALVLAVRQAGGPPGAPARPGQGSPHRAAQVARAAAHLAGYSALLGYIWYQRRTSHQSAA
Ga0306919_103358583	3300031879	Soil	MTAESSAGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRVVRAAAHLAGYSALLGYIWRQRQTSRPSAA
Ga0318551_106759042	3300031896	Soil	MPITESTANQADQNHDRDRDRELVRAITDALVLAVGKRAAHQVLRRARARSGYTAQHRAVHAAAHLAGYSALLGYIWHQRRTSNHSGA
Ga0318562_103822301	3300032008	Soil	MTTTESTTSQAGQAHDRDRELVRAITDALVLAVGKQTAHKVLRRARPKSDGTAQHRAMRAAAHLAGYTALLGYIWHQRRTSHQPAA
Ga0318524_104345941	3300032067	Soil	DRDRELVRAITDALVLAVGKQTAHKVLRRARAKSDGTAQHRAMRAAAHLAGYTALLGYIWHQRRTSHQPAA
Ga0318540_104337002	3300032094	Soil	MTAESSAGQTHQSHDRDRDRELVRAITDALVLAVGKRAAHQALRRAQTKAHGTAQRRVVRAAAHLAGYSALLGYIWRQRQTSRPPAA
Ga0311301_103890562	3300032160	Peatlands Soil	MTGSTTEQTGQTRDRDRDRELVRAITDALVLAAGNRAAHQALRRAQAKVHPTAQHRAVQTAAHLAGYSALLGYIWHLRRTSHHSAA
Ga0311301_112632152	3300032160	Peatlands Soil	MPANESTTKQADQNHDRELVRAITDALVLAVGKRAAHQALRHARARSGRAAQRRAVHAAAHLAGYSALLGYLWRQRRTSHQSAA
Ga0311301_121275881	3300032160	Peatlands Soil	MTAKSTTRQTGQNHDRDRDRELVRAITDALILAVGKRTAHRALRHARAKAQPTARHRAVRAAGHLAGYSALLGYIWHQRRTSHQSAA
Ga0307471_1037776861	3300032180	Hardwood Forest Soil	MKTTESAAESTAAQPNHDHDRDRELVRAITDALVLAVGKRAAHQAVRHARQHHENGQRRAVELRALRTAAHLAGYSALIGYIWRQRRTSQHAA
Ga0307472_1012211151	3300032205	Hardwood Forest Soil	TTESAAESTAAQPNHDHDRDRELVRAITDALVLAVGKRAAHQAVRHARRQHHENGQRRAMELRALRTAAHLAGYSALIGYIWRQRRTSQHAA
Ga0306920_1007287112	3300032261	Soil	MNAESSTAQTDRSHDRDRDRELVRAITDALVLAVGKRAAHQALRHAHDRAHRTAQHRVARAAAHMAGYSALLGYIWHQRRTSHQSAA
Ga0306920_1044609161	3300032261	Soil	MTSTESTVSQPGQARDRDRDRELVRALTDALVLAVGRRAARQALWRARARSRRTGPARVARAAAHLAGYSALAGYIWHQRRTARQSVA
Ga0335074_106082182	3300032895	Soil	MPATESTTRQADQNHDRDRDLVRAITDALVLAVGKKAAHQALRRARAKSDRIARRRAVHAAAHLAGYSALLGYIWRQRRTSHHSAA
Ga0335075_104895201	3300032896	Soil	MPATESTTKQADQNQDRYREMVRAITDALVLAVGNRAAHRALRRARAKAAQTAQRRVVHAAAHLIGYSALLGYIWPQRRTSRHSEA
Ga0335073_117411302	3300033134	Soil	ATESTTRQADQNHDRDRDLVRAITDALVLAVGKKAAHQALRRARAKSDRIARRRAVHAAAHLAGYSALLGYIWRQRRTSHHSAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094819

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences