Metagenome / Metatranscriptome Family F094801

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094801
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	57 residues
Representative Sequence	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAPAETPAQ
Number of Associated Samples	84
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	58.10 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (60.000 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (79.048 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (84.762 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.09% β-sheet: 0.00% Coil/Unstructured: 65.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13884	Peptidase_S74	13.33
PF09374	PG_binding_3	7.62
PF00535	Glycos_transf_2	5.71
PF00959	Phage_lysozyme	3.81
PF01541	GIY-YIG	1.90
PF08291	Peptidase_M15_3	0.95
PF02801	Ketoacyl-synt_C	0.95
PF13539	Peptidase_M15_4	0.95
PF09979	DUF2213	0.95
PF13392	HNH_3	0.95
PF12708	Pectate_lyase_3	0.95
PF00166	Cpn10	0.95
PF05037	DUF669	0.95
PF11351	GTA_holin_3TM	0.95
PF05838	Glyco_hydro_108	0.95
PF13759	2OG-FeII_Oxy_5	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG3926	Lysozyme family protein	General function prediction only [R]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.10 %
Unclassified	root	N/A	21.90 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	63.81 %
Unclassified	root	N/A	21.90 %
cellular organisms	root	All Organisms → cellular organisms	14.29 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	60.00 %
Unclassified	root	N/A	21.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.29 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	60.00 %
Unclassified	root	N/A	21.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	60.00 %
Unclassified	root	N/A	21.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	60.00 %
Unclassified	root	N/A	21.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.95 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	56.19 %
Unclassified	root	N/A	21.90 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.95 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.95 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.95 %
unclassified Pseudomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales	0.95 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	56.19 %
Unclassified	root	N/A	21.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Pseudomonadales bacterium 32-61-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium 32-61-5	0.95 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.95 %
Curvibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter	0.95 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.95 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	56.19 %
Unclassified	root	N/A	21.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Anabaena	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena	0.95 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.95 %
Curvibacter lanceolatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter lanceolatus	0.95 %
Pseudomonadales bacterium 32-61-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium 32-61-5	0.95 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	56.19 %
Unclassified	root	N/A	21.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
unclassified Anabaena	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena	0.95 %
Sphingomonas sp. SRS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	0.95 %
Curvibacter lanceolatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter lanceolatus	0.95 %
Pseudomonadales bacterium 32-61-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium 32-61-5	0.95 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	56.19 %
Unclassified	root	N/A	21.90 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.90 %
Anabaena sp. CRKS33	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	0.95 %
Sphingomonas sp. SRS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	0.95 %
Curvibacter lanceolatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter lanceolatus	0.95 %
Pseudomonadales bacterium 32-61-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium 32-61-5	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c035174	Not Available	675	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1010504	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5035	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10037281	All Organisms → cellular organisms → Bacteria	3243	Open in IMG/M
3300001837\|RCM39_1082073	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
3300001838\|RCM33_1000041	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23616	Open in IMG/M
3300001839\|RCM40_1031141	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1428	Open in IMG/M
3300001843\|RCM34_1002118	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5615	Open in IMG/M
3300002203\|metazooDRAFT_1310401	All Organisms → Viruses → Predicted Viral	1000	Open in IMG/M
3300003375\|JGI26470J50227_1007064	All Organisms → cellular organisms → Bacteria → Proteobacteria	2989	Open in IMG/M
3300003375\|JGI26470J50227_1010109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	2376	Open in IMG/M
3300003375\|JGI26470J50227_1058748	Not Available	646	Open in IMG/M
3300003787\|Ga0007811_1000022	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23176	Open in IMG/M
3300003787\|Ga0007811_1001760	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3023	Open in IMG/M
3300003796\|Ga0007865_1000250	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9024	Open in IMG/M
3300003797\|Ga0007846_1003785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1863	Open in IMG/M
3300003804\|Ga0007817_1003841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1128	Open in IMG/M
3300003805\|Ga0007838_1004273	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300003812\|Ga0007861_1000606	All Organisms → cellular organisms → Bacteria	4030	Open in IMG/M
3300003813\|Ga0007879_1012384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	949	Open in IMG/M
3300003827\|Ga0007880_1021185	Not Available	577	Open in IMG/M
3300004095\|Ga0007829_10000187	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11996	Open in IMG/M
3300004461\|Ga0066223_1115968	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300004777\|Ga0007827_10156233	Not Available	508	Open in IMG/M
3300004806\|Ga0007854_10118381	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1192	Open in IMG/M
3300006100\|Ga0007806_1036269	Not Available	974	Open in IMG/M
3300006105\|Ga0007819_1000709	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10967	Open in IMG/M
3300006122\|Ga0007837_1023994	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1035	Open in IMG/M
3300006127\|Ga0007805_1045778	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	972	Open in IMG/M
3300009151\|Ga0114962_10337368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	830	Open in IMG/M
3300009152\|Ga0114980_10109697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1648	Open in IMG/M
3300009154\|Ga0114963_10059205	All Organisms → cellular organisms → Bacteria → Proteobacteria	2421	Open in IMG/M
3300009154\|Ga0114963_10072809	Not Available	2145	Open in IMG/M
3300009160\|Ga0114981_10149819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1287	Open in IMG/M
3300009163\|Ga0114970_10247205	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1032	Open in IMG/M
3300009175\|Ga0073936_10180159	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1532	Open in IMG/M
3300009180\|Ga0114979_10216851	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1154	Open in IMG/M
3300009182\|Ga0114959_10203993	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1023	Open in IMG/M
3300009387\|Ga0103871_1008025	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	799	Open in IMG/M
3300009502\|Ga0114951_10027651	All Organisms → Viruses	3685	Open in IMG/M
3300009502\|Ga0114951_10422077	Not Available	662	Open in IMG/M
3300009684\|Ga0114958_10194851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1013	Open in IMG/M
3300010354\|Ga0129333_10004847	Not Available	12604	Open in IMG/M
3300010354\|Ga0129333_10249469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Anabaena → unclassified Anabaena → Anabaena sp. CRKS33	1600	Open in IMG/M
3300010885\|Ga0133913_10720563	Not Available	2608	Open in IMG/M
3300011984\|Ga0119931_1022419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	728	Open in IMG/M
3300013093\|Ga0164296_1019057	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4408	Open in IMG/M
3300013093\|Ga0164296_1044570	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2214	Open in IMG/M
3300013093\|Ga0164296_1207501	Not Available	754	Open in IMG/M
3300013094\|Ga0164297_10109108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1158	Open in IMG/M
3300013285\|Ga0136642_1082141	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	845	Open in IMG/M
3300014960\|Ga0134316_1028870	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	625	Open in IMG/M
3300017707\|Ga0181363_1057604	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	687	Open in IMG/M
3300020681\|Ga0214253_105284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1349	Open in IMG/M
3300020688\|Ga0214239_113465	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	789	Open in IMG/M
3300020710\|Ga0214198_1001060	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4887	Open in IMG/M
3300020710\|Ga0214198_1014325	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1010	Open in IMG/M
3300020716\|Ga0214207_1017483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	880	Open in IMG/M
3300020716\|Ga0214207_1029070	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	637	Open in IMG/M
3300020718\|Ga0214178_1006749	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1818	Open in IMG/M
3300020720\|Ga0214252_1004765	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2446	Open in IMG/M
3300021121\|Ga0214173_100785	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4402	Open in IMG/M
3300021133\|Ga0214175_1000603	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9550	Open in IMG/M
3300021133\|Ga0214175_1005319	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2129	Open in IMG/M
3300021133\|Ga0214175_1034913	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	616	Open in IMG/M
3300021138\|Ga0214164_1102582	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	535	Open in IMG/M
3300021139\|Ga0214166_1013238	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2254	Open in IMG/M
3300021354\|Ga0194047_10269916	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657	Open in IMG/M
3300021956\|Ga0213922_1004483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4365	Open in IMG/M
3300022555\|Ga0212088_10129636	Not Available	2198	Open in IMG/M
3300022555\|Ga0212088_10346050	Not Available	1040	Open in IMG/M
3300022602\|Ga0248169_100926	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	43636	Open in IMG/M
3300022602\|Ga0248169_123432	Not Available	3604	Open in IMG/M
3300024289\|Ga0255147_1111166	Not Available	500	Open in IMG/M
3300025162\|Ga0209083_1208776	Not Available	724	Open in IMG/M
3300025369\|Ga0208382_1003674	All Organisms → cellular organisms → Bacteria	3292	Open in IMG/M
3300025379\|Ga0208738_1000133	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23197	Open in IMG/M
3300025379\|Ga0208738_1027142	Not Available	885	Open in IMG/M
3300025381\|Ga0208871_1007712	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1884	Open in IMG/M
3300025391\|Ga0208740_1001633	Not Available	4812	Open in IMG/M
3300025398\|Ga0208251_1000808	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8192	Open in IMG/M
3300025402\|Ga0208876_1007335	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2105	Open in IMG/M
3300025430\|Ga0208622_1075855	Not Available	564	Open in IMG/M
3300025470\|Ga0208389_1060209	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	703	Open in IMG/M
3300025773\|Ga0208104_1036865	Not Available	574	Open in IMG/M
3300025783\|Ga0208258_1000403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9346	Open in IMG/M
3300025783\|Ga0208258_1015206	Not Available	1194	Open in IMG/M
3300025783\|Ga0208258_1017613	All Organisms → Viruses	1095	Open in IMG/M
3300027467\|Ga0255154_1012413	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2016	Open in IMG/M
3300027708\|Ga0209188_1315241	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	516	Open in IMG/M
3300027736\|Ga0209190_1001638	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15534	Open in IMG/M
3300027741\|Ga0209085_1000205	All Organisms → cellular organisms → Bacteria	45850	Open in IMG/M
3300027741\|Ga0209085_1047827	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1987	Open in IMG/M
3300027763\|Ga0209088_10000224	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	41763	Open in IMG/M
3300031759\|Ga0316219_1064653	All Organisms → cellular organisms → Bacteria → Proteobacteria	1463	Open in IMG/M
3300031759\|Ga0316219_1109429	Not Available	1052	Open in IMG/M
3300031813\|Ga0316217_10000504	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	55986	Open in IMG/M
3300031857\|Ga0315909_10014408	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8174	Open in IMG/M
3300032117\|Ga0316218_1009000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → Curvibacter lanceolatus	6039	Open in IMG/M
3300032117\|Ga0316218_1136494	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	927	Open in IMG/M
3300032117\|Ga0316218_1193096	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300032665\|Ga0316221_1025553	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2733	Open in IMG/M
3300032675\|Ga0316225_1034412	All Organisms → Viruses → Predicted Viral	2035	Open in IMG/M
3300032676\|Ga0316229_1302284	Not Available	585	Open in IMG/M
3300032722\|Ga0316231_1357518	Not Available	555	Open in IMG/M
3300034022\|Ga0335005_0519974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium 32-61-5	659	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.14%
Marine	Environmental → Aquatic → Marine	2.86%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	58.10%
Lake	Environmental → Aquatic → Freshwater → Lake	28.57%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.81%
Coastal	Environmental → Aquatic → Marine → Coastal	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.90%
River	Environmental → Aquatic → Freshwater → River	1.90%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Creek	Environmental → Aquatic → Freshwater → Creek	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	29.52%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	28.57%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	13.33%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	13.33%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.86%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	28.57%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.29%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	13.33%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	12.38%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.67%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.81%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	3.81%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	2.86%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	1.90%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.90%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.90%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.95%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.95%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.95%
Drinking Water Treatment Plant	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant	0.95%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.95%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.95%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300001837	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM39, ROCA_DNA237_0.2um_Ob_C_3a	Environmental	Open in IMG/M
3300001838	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2a	Environmental	Open in IMG/M
3300001839	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM40, ROCA_DNA238_2.0um_Ob_C_3b	Environmental	Open in IMG/M
3300001843	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM34, ROCA_DNA218_2.0um_bLM_C_2b	Environmental	Open in IMG/M
3300002203	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAR 2013	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun08	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003827	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300006100	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006122	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009387	Microbial communities of water from Amazon river, Brazil - RCM24	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011984	Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201107	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300014960	Surface water microbial communities from Bangladesh - BaraHaldiaSW0709	Environmental	Open in IMG/M
3300017707	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.N	Environmental	Open in IMG/M
3300020681	Freshwater microbial communities from Trout Bog Lake, WI - 21JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020688	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020718	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 epilimnion	Environmental	Open in IMG/M
3300020720	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 hypolimnion	Environmental	Open in IMG/M
3300021121	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 epilimnion	Environmental	Open in IMG/M
3300021133	Freshwater microbial communities from Trout Bog Lake, WI - 09AUG2007 epilimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021354	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5m	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025381	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025391	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025398	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025430	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025470	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09 (SPAdes)	Environmental	Open in IMG/M
3300025783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09 (SPAdes)	Environmental	Open in IMG/M
3300027467	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepB_8h	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0351742	3300000176	Freshwater	MNSITLTTDLVNSIMQYLGNQPFVQVAGLIQEVQKQASAQGAQPAAPEVPATDAPTTN*
TBL_comb48_EPIDRAFT_101050410	3300000439	Freshwater	MDSIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAETPAETPAQ
TBL_comb47_HYPODRAFT_100372811	3300000553	Freshwater	NTILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAQPTETPPDQG*
RCM39_10820731	3300001837	Marine Plankton	MNELKLSTDLVNAILQYLGNRPFVEVAGLIQEIQKQASAQGQEPVAAPEAPAAAEPAQPAQA*
RCM33_100004121	3300001838	Marine Plankton	MDEIKLKTNLVNAILQYLGSRPFVEVAGLIQSIQQQAQAQGAQPAAAPAEAAPAE*
RCM40_10311413	3300001839	Marine Plankton	MNKLKLSTDLVNAILQYLGNRPFVEVAGLIQEIQKQASAQGQEPVAAPEAPAAAEPAQPAQA*
RCM34_10021189	3300001843	Marine Plankton	MDEIKLKTNLVNAILQYLGSRPFVEVAGLIQSIQQQAQAQGAQPAAAPAEAAPSE*
metazooDRAFT_13104012	3300002203	Lake	MDNLTLPTQLINGILQYLGTRPYVEVAGLIQAIQQEAAKQGAQPEQAPGLTD*
JGI26470J50227_10070648	3300003375	Freshwater	MNSITLTTDLVNGILQYLGNQKFVEVAGLIQEIQKQAGAQGAQPAPAPEVAPASAEATPTA*
JGI26470J50227_10101093	3300003375	Freshwater	MDGIKLSTDLVNTILQYLGNQKFVEVAGLIQAIQQQAQAQGAQPVEAPAPAEAQPTETPPDQG
JGI26470J50227_10587482	3300003375	Freshwater	MNSITLTTDLVNAIMQYLGNQKFVDVAGLIQEIQKQASAQGAQPAAEVAPAPAEATPTA*
Ga0007811_10000229	3300003787	Freshwater	MNEIKLSTDLVNAILQYLGNRPYVETVGLIQGIQKQAADQGAQPAQAETPAAE*
Ga0007811_10017602	3300003787	Freshwater	MNEIKLTTDLVNAIMQYLGSKPFVEVAGLIQEVQKQAQAQGAQPAAEAAPAPAEASPN*
Ga0007865_10002509	3300003796	Freshwater	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAPAETPAQ
Ga0007846_10037852	3300003797	Freshwater	MNSITLTTDLVNSIMQYLGNQKFVEVAGLIQEIQKQANAQGAQPAAEVAPAPAEATPTA*
Ga0007817_10038413	3300003804	Freshwater	MNSITLTTDLVNAIMQYLYNQKFVEVAGLIQEIQKQASAQGAQPAAEVAPAPAEATPTA*
Ga0007838_10042732	3300003805	Freshwater	MDEIKLSTNLINGILQYLGTKPFTEVAGLIQEIQKQASAQGAQSAAPEKVEAEPVN*
Ga0007861_10006066	3300003812	Freshwater	MDEIKLSTQLVNGILQYLGNRPFVEVAGLIQEIQKQAQEQGAQPAPAPEVKE*
Ga0007879_10123841	3300003813	Freshwater	MDGIKLSTDLVSLVQAIQQQAQAQGAQPAEAPAPAEAPAETPAETPAQ*
Ga0007880_10211851	3300003827	Freshwater	RGSHHPILVAFSRRCEMNSITLTTDLVNAIMQYLYNQKFVEVAGLIQEIQKQASAQGAQPAAEVAPAPAEATPTA*
Ga0007829_100001873	3300004095	Freshwater	MDEIKLSTNLVNAILQYLGNQRWIDVSGLINGIQQEAQAQGAQPAQAPVAPAEAPAEAPAQ*
Ga0066223_11159681	3300004461	Marine	MNELKLTTDLVNAILQYLGNRPFVEVAGLIQEIQKQASSQGAEPTAIEEPTPAE*
Ga0007827_101562331	3300004777	Freshwater	PILVAFSRRCEMNSITLTTDLVNAIMQYLGNQKFVEVAGLIQEIQKQASQQGAQPAEAAPAPAEASPN*
Ga0007854_101183811	3300004806	Freshwater	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAEPTPETPAA*
Ga0007806_10362692	3300006100	Freshwater	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAPAETPAETPAQ*
Ga0007819_100070915	3300006105	Freshwater	LVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAPAETPAQ*
Ga0007837_10239944	3300006122	Freshwater	TQLVNGILQYLGNRPFVEVAGLIQEIQKQAQEQGAQPAPAPEVKE*
Ga0007805_10457784	3300006127	Freshwater	RGSHHPILVAFSRRCEMNSITLTTDLVNSIMQYLGNQKFVEVAGLIQEIQKQANAQGAQPAAEVAPAPAEATPTA*
Ga0114962_103373681	3300009151	Freshwater Lake	MNELKLKTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPAAIEEPKPE*
Ga0114980_101096976	3300009152	Freshwater Lake	MDEIKLSTDLVNAVLQYLGNRPFVEVAGLIQGIQQQASEQGAQPVVAEEPAAE*
Ga0114963_100592053	3300009154	Freshwater Lake	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAIEEPTPAE*
Ga0114963_100728094	3300009154	Freshwater Lake	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAIEEPAAE*
Ga0114981_101498196	3300009160	Freshwater Lake	DEIKLSTDLVNAVLQYLGNRPFVEVAGLIQGIQQQASEQGAQPVVAEEPKSE*
Ga0114970_102472053	3300009163	Freshwater Lake	MDEIKLSTNLINGILQYLGTKPFIEVAGLIQEIQKQASAQGAQAAPAPEAPAAE*
Ga0073936_101801592	3300009175	Freshwater Lake Hypolimnion	MDGITLSTDLLNAIMQYLGTRPYVEIAGLINEVQKQAQAQVAQPAQAPQAPAETPAEAPAQ*
Ga0114979_102168514	3300009180	Freshwater Lake	MDEIKLSTDLVNAVLQYLGNRPFVEVAGLIQGIQQQASEQGAQPVVAEEPKSE*
Ga0114959_102039933	3300009182	Freshwater Lake	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAIEEPASVE*
Ga0103871_10080254	3300009387	River Water	MDEIKLKTDLVNAILQYLGNRPFVEVAGLIQGIQQQAAEQGAQPAAAPVEAAPE*
Ga0114951_100276513	3300009502	Freshwater	MDGITLSTDLLNAIMQYLGTRPYVEVAGLINEVQKQAQAQGAQPAQAPQAPAETPAEAPAQ*
Ga0114951_104220773	3300009502	Freshwater	MDEIKLSTNLVNGILQYLGTRPFTEVAGLIQAVQQEAAKQGAQPVEAPAPAAE*
Ga0114958_101948511	3300009684	Freshwater Lake	MNELKLKTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPAAIEEPK
Ga0129333_1000484714	3300010354	Freshwater To Marine Saline Gradient	MDELKLPTQLVNALLQYLGGRPFVEVAGLIEAIHKAAKEQGAIPVSAEQPAEPVRTPETLN*
Ga0129333_102494692	3300010354	Freshwater To Marine Saline Gradient	MDEIKLPTQLVNAIMQYLGSRPFVEVAGLIQAVQQEAGKQGAQPEAAPGLTE*
Ga0133913_107205632	3300010885	Freshwater Lake	MNELKLRTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAIDEPAPAE*
Ga0119931_10224192	3300011984	Drinking Water Treatment Plant	MNEIRLSTQLVNAIMQYLGNRPFVEVAGLIQAVQKEAGEQGATPVEAPAEPTQD*
Ga0164296_10190571	3300013093	Freshwater	KLSTDLVNTILQYLGNQKFVEVAGLVQAIQQQAQAQGEQPVEAPAPAEAQPTETPPDQG*
Ga0164296_10445706	3300013093	Freshwater	MNSITLTTDLVNSIMQYLGNQPFVQVAGLIQEVQKQASAQGAQPAAEVAPAPAEATPTA*
Ga0164296_12075011	3300013093	Freshwater	MNSITLTTDLVNSIMQYLGNQKFVEVAGLIQEIQKQASAQGAQPAAPEVPATEAPTTN*
Ga0164297_101091082	3300013094	Freshwater	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAAQAASTDAPATVDAPAVDPATSTVQ*
Ga0136642_10821412	3300013285	Freshwater	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAIEEPAE*
Ga0134316_10288702	3300014960	Surface Water	MDEIKLSTNLVNAVLQYLGTRPFVEVAGLIGGIQQEAAAQGAQPVAAPESDSAE*
Ga0181363_10576043	3300017707	Freshwater Lake	MDEIKLSTNLINGILQYLGSKPFAEVAGLIQAVQQEAAKQGAQPVAAEEPAAE
Ga0214253_1052843	3300020681	Freshwater	MDGIKLSTDIVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAETPAETPAQ
Ga0214239_1134653	3300020688	Freshwater	VNTILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAAPAEAQPTETPPDQG
Ga0214198_10010608	3300020710	Freshwater	MNSITLTTDLVNSIMQYLGNQPFVQVAGLIQEVQKQASAQGAQPAAPEVPATDAPTTN
Ga0214198_10143253	3300020710	Freshwater	MDEIKLSTNLINGILQYLGTKPFTEVAGLIQEIQKQASAQGAQSAAPEKVEAEPVN
Ga0214207_10174832	3300020716	Freshwater	MDEIKLSTQLVNGILQYLGNRPFVEVAGLIQEIQKQAQEQGAQPAPAPEVKE
Ga0214207_10290702	3300020716	Freshwater	MDGIKLSTDLVNTILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAETPAETPAQ
Ga0214178_10067493	3300020718	Freshwater	MDGIKLSTDIVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPVEAPAPAEAQPTETPPDQG
Ga0214252_10047652	3300020720	Freshwater	MDGIKLSTDLVNTILQYLGNQKFVEVAGLVQAIQQQAQAQGEQPVEAPAPAEAQPTETPPDQG
Ga0214173_1007852	3300021121	Freshwater	MDSIKLTTDLVNTILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAQPTETPPDQG
Ga0214175_10006032	3300021133	Freshwater	MDSIKLSTDLVNTILQYLGNQKFVEVAGLVQAIQQQAQAQDAQPVEAPAPAEAQPTETPPDQG
Ga0214175_10053196	3300021133	Freshwater	MNSITLTTDLVNSIMQYLGNQKFVDVAGLIQEIQKQASAQGAQPAAEVAPAPAEATPTA
Ga0214175_10349133	3300021133	Freshwater	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAETPAETPAQ
Ga0214164_11025822	3300021138	Freshwater	MNSITLTTDLVNAIMQYLGNQKFVEVAGLIQEIQKQASQQGAQPAE
Ga0214166_10132383	3300021139	Freshwater	MNEIKLSTDLVNAILQYLGNRPYVETVGLIQGIQKQAADQGAQPAQA
Ga0194047_102699162	3300021354	Anoxic Zone Freshwater	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAVDEPAAE
Ga0213922_10044832	3300021956	Freshwater	MDEIKLSTNLVNGLLQYLGSRPYVEVAGLVQAIQKEAAEQGAKPVAAPEAE
Ga0212088_101296365	3300022555	Freshwater Lake Hypolimnion	MDGITLSTDLLNAIMQYLGTRPYVEVAGLINEVQKQAQAQGAQPAQAPQAPAETPAEAPA
Ga0212088_103460504	3300022555	Freshwater Lake Hypolimnion	MDGITLSTDLLNAIMQYLGTRPYVEIAGLINEVQKQAQAQVAQPAQAPQAPAETPAEAPA
Ga0248169_10092614	3300022602	Freshwater	MNSITLTTDLVNSIMQYLGNQPFVQVAGLIQEVQKQASAQGAQPAAEVAPAPAEATPTA
Ga0248169_1234326	3300022602	Freshwater	MNEIKLSTDLVNAILQYLGNRPYVETVGLIQGIQKQAADQGAQPAQAEIPAAE
Ga0255147_11111662	3300024289	Freshwater	MDEIKLKTDLVNAILQYLGSKPFVEVAGLIQGIQQQASEQGAQPVAAD
Ga0209083_12087761	3300025162	Freshwater	GTFHGDEKMDGITLSTDLLNAIMQYLGTRPYVEVAGLINEVQKQAQAQGAQPAQAPQAPAETPAEAPAQ
Ga0208382_10036742	3300025369	Freshwater	MNEIKLTTDLVNAIMQYLGSKPFVEVAGLIQEVQKQAQAQGAQPAAEAAPAPAEASPN
Ga0208738_10001339	3300025379	Freshwater	MNEIKLSTDLVNAILQYLGNRPYVETVGLIQGIQKQAADQGAQPAQAETPAAE
Ga0208738_10271422	3300025379	Freshwater	MNSITLTTDLVNSIMQYLGNQKFVEVAGLIQEIQKQANAQGAQPAAEVAPAPAEATPTA
Ga0208871_10077124	3300025381	Freshwater	MNSITLTTDLVNAIMQYLYNQKFVEVAGLIQEIQKQASAQGAQPAAEVAPAPAEATPTA
Ga0208740_10016333	3300025391	Freshwater	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAEPTPETPAA
Ga0208251_10008083	3300025398	Freshwater	MDEIKLSTNLVNAILQYLGNQRWIDVSGLINGIQQEAQAQGAQPAQAPVAPAEAPAEAPA
Ga0208876_10073357	3300025402	Freshwater	MNEIKLTTDLVNAIMQYLYNQKFVEVAGLIQEIQKQASAQGAQPAAEVAPAPAEATPTA
Ga0208622_10758551	3300025430	Freshwater	MDGIKLSTDLVNTILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAQPTDQAGGFNEGTA
Ga0208389_10602093	3300025470	Freshwater	TDLVNAIMQYLYNQKFVEVAGLIQEIQKQASAQGAQPAAEVAPAPAEATPTA
Ga0208104_10368652	3300025773	Freshwater	FHGDEKMDEIKLSTNLVNAILQYLGNQRWIDVSGLINGIQQEAQAQGAQPAQAPVAPAEAPAEAPAQ
Ga0208258_10004031	3300025783	Freshwater	TDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAEAPAETPAQ
Ga0208258_10152061	3300025783	Freshwater	TDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAEPTPETPAA
Ga0208258_10176133	3300025783	Freshwater	MDGIKLSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPA
Ga0255154_10124136	3300027467	Freshwater	MDEIKLKTDLVNAILQYLGSKPFVEVAGLIQGIQQQASEQGAQPVAADSTPE
Ga0209188_13152411	3300027708	Freshwater Lake	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPAAIEEPKPE
Ga0209190_10016388	3300027736	Freshwater Lake	MDEIKLSTNLINGILQYLGTKPFIEVAGLIQEIQKQASAQGAQAAPAPEAPAAE
Ga0209085_100020559	3300027741	Freshwater Lake	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAIEEPAAE
Ga0209085_10478274	3300027741	Freshwater Lake	MNELKLTTDLVNAVLQYLGNRPFVEVAGLIQEIQKQASAQGAEPTAIEEPTPAE
Ga0209088_1000022413	3300027763	Freshwater Lake	MDEIKLSTDLVNAVLQYLGNRPFVEVAGLIQGIQQQASEQGAQPVVAEEPAAE
Ga0316219_10646536	3300031759	Freshwater	STDIVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAETPAETPAQ
Ga0316219_11094291	3300031759	Freshwater	MDGIKLSTDLVNTILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAAPA
Ga0316217_100005041	3300031813	Freshwater	LSTDLVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAEPTPETPAA
Ga0315909_100144089	3300031857	Freshwater	MDEIKLSTNLINGILQYLGGRPFAEVAGLIQAIQQEAAKQGAQPVAAEEPSAE
Ga0316218_10090009	3300032117	Freshwater	KMDGIKLSTDLVNTILQYLGNQKFVEVAGLIQAIQQQAQAQGAQPVEAPAPAEAQPTETPPDQG
Ga0316218_11364941	3300032117	Freshwater	SRRCEMNSITLTTDLVNGILQYLGNQKFVEVAGLIQEIQKQAGAQGAQPAPAPEVAPASAEATPTA
Ga0316218_11930964	3300032117	Freshwater	IKLSTDIVNAILQYLGNQKFVEVAGLVQAIQQQAQAQGAQPAEAPAPAETPAETPAQ
Ga0316221_10255531	3300032665	Freshwater	TLFWWHFSRRCEMNSITLTTDLVNGILQYLGNQKFVEVAGLIQEIQKQAGAQGAQPAPAPEVAPASAEATPTA
Ga0316225_10344124	3300032675	Freshwater	MNSITLTTDLVNSIMQYLGNQPFVQVAGLIQEVQKQASAQGAQPAAP
Ga0316229_13022842	3300032676	Freshwater	MNSITLTTDLVNSIMQYLGNQKFVEVAGLIQEVQKQASAQGAQPAPAPEAAPAPAEATPT
Ga0316231_13575181	3300032722	Freshwater	MDGIKLSTDLVNTILQYLGNQKFVEVAGLIQAIQQQAQAQGAQPVEAPAPAEAQPTET
Ga0335005_0519974_3_143	3300034022	Freshwater	MDELKLSTSLVNSILQYLGGRPWVEVAGLIQSIQQQAAAQGAQPSEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094801

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences