Metagenome / Metatranscriptome Family F094702

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094702
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	115 residues
Representative Sequence	MRKLRKTGAVDQDGNVVTIPRLPFVTGANKPPGWNRWSPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERERILSEMTRREFGDDA
Number of Associated Samples	53
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.48 %
% of genes near scaffold ends (potentially truncated)	39.05 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.286 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (43.809 % of family members)
Environment Ontology (ENVO)	Unclassified (52.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.238 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.65% β-sheet: 7.09% Coil/Unstructured: 43.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13462	Thioredoxin_4	1.90
PF03070	TENA_THI-4	1.90
PF00496	SBP_bac_5	0.95
PF04392	ABC_sub_bind	0.95
PF08734	GYD	0.95
PF01609	DDE_Tnp_1	0.95
PF00589	Phage_integrase	0.95
PF00924	MS_channel	0.95
PF00892	EamA	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.95
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.95
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.95
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.95
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.95
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.95
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.95
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.95
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
All Organisms	root	All Organisms	25.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
cellular organisms	root	All Organisms → cellular organisms	25.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.33 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.86 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.57 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.86 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.95 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.95 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.95 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.95 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.95 %
Spirosomaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.95 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Dyadobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter	0.95 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.95 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.29 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.90 %
Dyadobacter crusticola	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → Dyadobacter crusticola	0.95 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.95 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.95 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.95 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_104231925	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005764\|Ga0066903_105981735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	638	Open in IMG/M
3300005764\|Ga0066903_106803386	Not Available	594	Open in IMG/M
3300010046\|Ga0126384_11697903	Not Available	597	Open in IMG/M
3300010046\|Ga0126384_11816611	Not Available	579	Open in IMG/M
3300010048\|Ga0126373_10212449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1882	Open in IMG/M
3300010048\|Ga0126373_12316965	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → Dyadobacter crusticola	597	Open in IMG/M
3300010048\|Ga0126373_12934263	Not Available	532	Open in IMG/M
3300010048\|Ga0126373_13070291	Not Available	520	Open in IMG/M
3300010048\|Ga0126373_13096126	Not Available	518	Open in IMG/M
3300010154\|Ga0127503_10864264	Not Available	502	Open in IMG/M
3300010358\|Ga0126370_11243943	Not Available	695	Open in IMG/M
3300010358\|Ga0126370_12435901	Not Available	520	Open in IMG/M
3300010359\|Ga0126376_11672902	Not Available	671	Open in IMG/M
3300010360\|Ga0126372_12441286	Not Available	573	Open in IMG/M
3300010361\|Ga0126378_10031071	All Organisms → cellular organisms → Bacteria → Proteobacteria	4780	Open in IMG/M
3300010361\|Ga0126378_10873237	Not Available	1007	Open in IMG/M
3300010361\|Ga0126378_10982526	Not Available	948	Open in IMG/M
3300010361\|Ga0126378_10995686	Not Available	942	Open in IMG/M
3300010361\|Ga0126378_11924402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300010361\|Ga0126378_12068976	Not Available	649	Open in IMG/M
3300010361\|Ga0126378_12958118	Not Available	542	Open in IMG/M
3300010361\|Ga0126378_13138780	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_10772596	Not Available	1059	Open in IMG/M
3300010366\|Ga0126379_12410697	Not Available	626	Open in IMG/M
3300010376\|Ga0126381_100375895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1972	Open in IMG/M
3300010376\|Ga0126381_100890974	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300010376\|Ga0126381_100981732	Not Available	1218	Open in IMG/M
3300010376\|Ga0126381_101134398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1130	Open in IMG/M
3300010376\|Ga0126381_101181298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1106	Open in IMG/M
3300010376\|Ga0126381_101805912	Not Available	883	Open in IMG/M
3300010376\|Ga0126381_102139382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300010376\|Ga0126381_102143448	Not Available	804	Open in IMG/M
3300010376\|Ga0126381_102148320	Not Available	803	Open in IMG/M
3300010376\|Ga0126381_102357649	Not Available	764	Open in IMG/M
3300010376\|Ga0126381_102740122	Not Available	704	Open in IMG/M
3300010376\|Ga0126381_103783646	Not Available	591	Open in IMG/M
3300010376\|Ga0126381_103990781	Not Available	574	Open in IMG/M
3300010398\|Ga0126383_12409242	Not Available	611	Open in IMG/M
3300010398\|Ga0126383_13408820	Not Available	519	Open in IMG/M
3300012971\|Ga0126369_10374603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1454	Open in IMG/M
3300016294\|Ga0182041_10078040	Not Available	2357	Open in IMG/M
3300016341\|Ga0182035_10247524	Not Available	1437	Open in IMG/M
3300016341\|Ga0182035_11812833	Not Available	552	Open in IMG/M
3300016357\|Ga0182032_11057123	Not Available	695	Open in IMG/M
3300016357\|Ga0182032_11403704	Not Available	605	Open in IMG/M
3300016445\|Ga0182038_10347207	Not Available	1228	Open in IMG/M
3300016445\|Ga0182038_11887405	Not Available	540	Open in IMG/M
3300020579\|Ga0210407_10193168	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300020580\|Ga0210403_10800201	Not Available	749	Open in IMG/M
3300020580\|Ga0210403_10942294	Not Available	679	Open in IMG/M
3300020583\|Ga0210401_11039901	Not Available	678	Open in IMG/M
3300021404\|Ga0210389_11431364	Not Available	527	Open in IMG/M
3300021476\|Ga0187846_10019972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3112	Open in IMG/M
3300021560\|Ga0126371_10697273	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300021560\|Ga0126371_11685727	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300021560\|Ga0126371_11695067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	756	Open in IMG/M
3300021560\|Ga0126371_11916177	Not Available	712	Open in IMG/M
3300021560\|Ga0126371_12022380	Not Available	693	Open in IMG/M
3300021560\|Ga0126371_12145058	Not Available	674	Open in IMG/M
3300021560\|Ga0126371_12572853	Not Available	616	Open in IMG/M
3300021560\|Ga0126371_13151494	Not Available	558	Open in IMG/M
3300021560\|Ga0126371_13195422	Not Available	554	Open in IMG/M
3300031057\|Ga0170834_106927530	Not Available	686	Open in IMG/M
3300031057\|Ga0170834_109327601	Not Available	500	Open in IMG/M
3300031231\|Ga0170824_105916491	Not Available	582	Open in IMG/M
3300031231\|Ga0170824_112035070	Not Available	950	Open in IMG/M
3300031474\|Ga0170818_110502628	Not Available	568	Open in IMG/M
3300031543\|Ga0318516_10701265	Not Available	575	Open in IMG/M
3300031561\|Ga0318528_10003641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6415	Open in IMG/M
3300031561\|Ga0318528_10223074	Not Available	1010	Open in IMG/M
3300031564\|Ga0318573_10443583	Not Available	698	Open in IMG/M
3300031640\|Ga0318555_10258217	Not Available	942	Open in IMG/M
3300031668\|Ga0318542_10286812	Not Available	841	Open in IMG/M
3300031679\|Ga0318561_10156553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1225	Open in IMG/M
3300031708\|Ga0310686_115548831	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300031718\|Ga0307474_11120328	Not Available	623	Open in IMG/M
3300031744\|Ga0306918_10130165	Not Available	1835	Open in IMG/M
3300031744\|Ga0306918_10940059	Not Available	673	Open in IMG/M
3300031744\|Ga0306918_11079520	Not Available	622	Open in IMG/M
3300031754\|Ga0307475_10850925	Not Available	722	Open in IMG/M
3300031819\|Ga0318568_10625506	Not Available	670	Open in IMG/M
3300031845\|Ga0318511_10068559	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300031890\|Ga0306925_11447852	Not Available	675	Open in IMG/M
3300031896\|Ga0318551_10405285	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300031910\|Ga0306923_10715589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1113	Open in IMG/M
3300031910\|Ga0306923_10974787	Not Available	923	Open in IMG/M
3300031910\|Ga0306923_11551018	Not Available	691	Open in IMG/M
3300031912\|Ga0306921_10191873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2395	Open in IMG/M
3300031912\|Ga0306921_10638224	Not Available	1229	Open in IMG/M
3300031912\|Ga0306921_11552133	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	721	Open in IMG/M
3300031912\|Ga0306921_11969780	Not Available	623	Open in IMG/M
3300031941\|Ga0310912_10339062	Not Available	1166	Open in IMG/M
3300031941\|Ga0310912_11288270	Not Available	554	Open in IMG/M
3300031945\|Ga0310913_10955171	Not Available	602	Open in IMG/M
3300031946\|Ga0310910_10553959	Not Available	912	Open in IMG/M
3300031947\|Ga0310909_10834546	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300031954\|Ga0306926_11708336	Not Available	718	Open in IMG/M
3300031962\|Ga0307479_11681270	Not Available	589	Open in IMG/M
3300032001\|Ga0306922_10744024	Not Available	1029	Open in IMG/M
3300032052\|Ga0318506_10125147	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300032066\|Ga0318514_10470517	Not Available	668	Open in IMG/M
3300032076\|Ga0306924_11693631	Not Available	663	Open in IMG/M
3300032261\|Ga0306920_102014522	Not Available	808	Open in IMG/M
3300032261\|Ga0306920_103604863	Not Available	570	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.05%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.10%
Freshwater	Environmental → Aquatic → Freshwater	0.95%
Cave	Environmental → Terrestrial → Cave	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.24%
Loam	Environmental → Terrestrial → Soil → Loam	2.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	50.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	43.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1042319251	3300005332	Tropical Forest Soil	MRRLRKTGAVDQNGNLITIPRLPSVTGANKPPGWNRWSAAEKAEHLLGLSLDRMHDYLAWPADELDPHRLAAQTQVIRVVAMVAAKVGDEARRERDKERVLGELIDSLEER
Ga0066903_1059817352	3300005764	Tropical Forest Soil	MRKLRKTGAVDQDGNVVKISRLPSVAGSNKPPGWKRWSAAEKAEHLLGLSLDRMHDYLSWPADGLDPYRLAAQTQVIRVVAMVAAKVGDEARRERDRERVLG
Ga0066903_1068033861	3300005764	Tropical Forest Soil	TDAQAAQAAAVDQDGNVVTIPRLPSVTNADKPPGSDRWSDAEKVQHLLGLSLDRMHDYLSWPPDNLDPHRLAAQTQAARVVTMVAARVGVEVRRSREREHVLNALVKDLPARFKPQRPG*
Ga0126384_116979031	3300010046	Tropical Forest Soil	MRKLRKTGAVDENGNLVTIPRLPSVTGANKPPGGNRWSAAEKAQHLLDMSLDRMHDYLSWPADDLDPHRLAAQTQIIRVIAVVAAKVGDEARRERDRERILEELHRDMDAR*
Ga0126384_118166111	3300010046	Tropical Forest Soil	MRKLRKTGAVDENGNLVTIPRLPSVTGANKPPGWNRLSAAEKAQHLLDMSLDRMRDYLSWPADELDRHRLAAQTQVIRAIAVVAAKVGDEARRERDRERILEELHRDMDAR*
Ga0126373_102124491	3300010048	Tropical Forest Soil	MRRLRKTAAVDQDGSVVTIPRLPPVAGTDKPAGWDRWSDAEKVQHLLGLSLDRMFDYLSWPPDNLDPHRLAAQAQVVRVVAMVAAKVGVEARRSPEREQALQALIRDLPDR
Ga0126373_123169651	3300010048	Tropical Forest Soil	MRKLRKTGAVDQDGSLVTIPRLPSISGANKPPGWNRWSAAEKVEHLLGLSLERMRDYLSWPPDDLDPYRLAAQTQITRVVAMIAAKVGVAARDRDQELWYLHLATEAGITVTAYTDRAEGVMEV
Ga0126373_129342631	3300010048	Tropical Forest Soil	MRKLRKTAAIDPEGSIVTTPRLPPVAGAAKPAGWDRWSEAEKVQHLLCLSLDRMHDYLSWPPDNLDPHRLAAQTQAARVVTMVAARVGVEVRRSREREHVLNALVKDLPARFKPQRPG*
Ga0126373_130702911	3300010048	Tropical Forest Soil	GMASSPMRKLRKTGAVDENGNLVTIPRLPSVTGANKPPGWNRWSAAEKAQHLLDMSLDRMHDYLSWPADELDPHRLAAQTQVIRVIAVVAAKVGDEARRERDRERILEELHRDMDAR*
Ga0126373_130961261	3300010048	Tropical Forest Soil	MRKIRKTGAIDQDGNVVTIPRLPSVTGANKPPGWNRWSAAEKAQHLLGMSLDRMHDYLAWPADELDPHRLAAQTQIIRVIAVVAAKVGDEARRERDRERILEELHRDMDAS*
Ga0127503_108642641	3300010154	Soil	MRKLRKTGAVDTNGNVVTIPRLPSVTGAHKPPGWNRWSAAEKVEHLLGLSLERMHDYLSWPADGLDPYRLAAQTQVVRVIAMVAAKVGGDAARERDRDRILGELIRGFESEEHSAGT*
Ga0126370_112439431	3300010358	Tropical Forest Soil	MASSPMRKLRKTGAVDENGNLVTIPRLPSNTGANKPPGWNRWSAAEKAQHLLDMSLDRMHDYLSWPADELDPHRLAAQTQVIRVIAVVAAKVGDEARRERDRERILEELHRDMDAS*
Ga0126370_124359012	3300010358	Tropical Forest Soil	MRKLRKTDAVDHDGNVITIPRLPSVIGANKPPGWNRWSAAEKAEHLLGLSLDRIYDYLSSPADNLDPYRLAAQTQVIRVIAMVAAKVGDEAR
Ga0126376_116729021	3300010359	Tropical Forest Soil	MRKLRKTGAIDQNGQEVTIPRLPSVTGANKPPGWNRWSAAEKAQHLLDMSLDRMHDYLSWPADELDPHRLAAQTQVIHVIAVVAAKVGDEARRERDRERILEELHRDMDAS*
Ga0126372_124412861	3300010360	Tropical Forest Soil	MRKLRKTGAIYQDGNVVTIPRPPAVTGVNKPPGWKRWSAAAKVQHLLGLSLDRIHDYLSWPTDLDPHRLAAQTQVVRVAAVVAAKVGDKHAASATGRGSSAIS*
Ga0126378_100310715	3300010361	Tropical Forest Soil	MASSPMRRLRKTGAVDQDGNVVTIPRLPSVAGSNKPPGWNRWSPAEKAEHLLGLSLDRMHEYLSWPADELDPYRLAAQTQVIRVVVMVAAKVGGEAARERDRERILSEMMRREFGDDPSDRTGKNRPRAEGR*
Ga0126378_108732371	3300010361	Tropical Forest Soil	MRRLRKTGAVDENGNLVTIPRLPSVTGANKPPGWNRWSAAEKAQHLLDMSLDRMRDYLSWPADELDPHRLATQTQVIRVIAVVAAKVGDEARRERDRERILEELHRDMDAR*
Ga0126378_109825261	3300010361	Tropical Forest Soil	MRKLRKTGAVDQDGNVITIPRLPSVAGSNKPPGWKRWSPAEKAEHLLGLSLDRMHEYLSWSADDLDPYRLAAQTQVIRVVAMVAAKVGVDARRERDRQRILAEMTRREFGDDPSDRTGKNRPRAEGR*
Ga0126378_109956862	3300010361	Tropical Forest Soil	MANSPMRKLRKMGAVDPDGNVVTIPRLPPVAGADKPAGWERWSDAEKVGHLLGLSLDRMHDYLSWPPDNLDPHRLTAQTQAARVVTMIAARAGVEARRSREREQALQALVRDLPEGYGPRRLG*
Ga0126378_119244022	3300010361	Tropical Forest Soil	RKIGAVDQDGNVITIPRLPSATGSNKPPGWNRWSAAEKVEHLLRLSLDRMHDYLAWPADDLDPYRLAAQTQVIRVVAMVGAKVGDQARRERKGQRIVDELLRKISAEHRSPETS*
Ga0126378_120689762	3300010361	Tropical Forest Soil	MRKLRKTGAVDQDGNVVTIPRLPFVTGANKPPGWNRWSPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERERILSEMTRREFGDDA*
Ga0126378_129581181	3300010361	Tropical Forest Soil	MAGSPLRRARKIGAVEPDGDLVTIPRLPRVAGTDKPPGWKRWSDADKVQHLLGLSLDRMHDYLSWPPDNLDPHTLAAQTQAARVVTMVAARAGVEARRSREREQTLNALIKDLPPRFRPPPE*
Ga0126378_131387801	3300010361	Tropical Forest Soil	MRKLRKTGAVDPDGNLVTIPRLPPVAGADKPAGWQRWSEAEKVQHLLGLSLDRMHDYLSWPPDNLDPHRLAAQTQAARVVTMIAARAGVEVRRSREREQAINALVKDLPPRFRPQPG*
Ga0126379_107725961	3300010366	Tropical Forest Soil	MANSPMRKLRKTGAVDPDGNVVTIPRLPPVAGADKPAGWERWSDAEKVGHLLGLTLDRMYDYLSWPPDNLDPHRLAAQQQTVRIVAMIAARAGVEARRSREREQALQALVRDLPPRFRPHRPG*
Ga0126379_124106971	3300010366	Tropical Forest Soil	MRKLRKTGAVDQDGNLVTIPRLPSVTGANRPPGWNRWSAAEKAQHLLGMSLDRMHDYLAWPADELDPHRLAAQTQVIRVIAMVAARVGDEARRERDKERVLGELIDSLEERRRAQT*
Ga0126381_1003758954	3300010376	Tropical Forest Soil	MRKLRKTGAVDQDGNLITIPRLPSVTGSNKPPGWNRWSTADKVEHLLGLSLDRIHEYLSWPAHDLDPDRLAAQTQVIRVVAMVAAKVGEEARRECTRDAVLGEMAREWRALKAAEADA*
Ga0126381_1008909742	3300010376	Tropical Forest Soil	MRRLRKTGAVDQNGNLITIPRLPSVTGANKPPGWNRWSAAEKAEHLLGLSLDRMHDYLSWPADELDPHRLAAQSQVIRVIAMVAAKVGDEARRERNRERVLGELIDGLKERAAHRG*
Ga0126381_1009817323	3300010376	Tropical Forest Soil	MRKLRKTGAVDQDGNFVTIPRLPSVTGANKPRGWNRWSPAEKVEHLLGLSLDRMHDYLAWPADDLDPYRLAAQTQVIRVVAMVGAKVADQARRERKGQRIVDELLRKISAEHRSPETS*
Ga0126381_1011343981	3300010376	Tropical Forest Soil	MRKLRKTAAIDQDGSVITIPRLPPVAGANKPSGWDRWSDAEKVEHLLGLTLDRMHDYLSWSPGNLDPHRLAAQTQAVRVITMVAAKAGVEARRSREREQALQALVRDLPEGYRPRRLG*
Ga0126381_1011812982	3300010376	Tropical Forest Soil	MRKLRKTGAVDQDGSLVTIPRLPSVSGANKPPGWNRWSAAEKVEHLLGLSLERMRDYLSWPPDDLDPYRLAAQTQIIRVVAMIAAKVGVAARDRDRERLIAELAQREDEEA*
Ga0126381_1018059121	3300010376	Tropical Forest Soil	MRRLRKTGAVDENGNLVTIPRLPSVTGANKPPGWNRWSAAEKAQHLLDMSLDRMRDYLSWPADELDPHRLAAQTQVIRVIAVVAAKVGDEARRERDRERILEELHRDMDAR*
Ga0126381_1021393822	3300010376	Tropical Forest Soil	MPGCPIRRARQAAVRDANGEVVAFPFLTKVSGADKPRGWSRWSAAEKVEYLLGLSVDRMHDYLSWPPDGLDPYRLAAQTQVIRVVAMVAPKAGGEAARERERHRIIEELTREEFGTSDEA
Ga0126381_1021434481	3300010376	Tropical Forest Soil	MRRPRKTGAVDQDGNVVIIPRLPPVAGSNKPPGWKRWSPAEKAEHLLGLSLDRMHDYLSWPAADLDPHRLAAQTQVIRVVVMVAAKVGDEARLQRDRDRMLAELSAREFGSA
Ga0126381_1021483202	3300010376	Tropical Forest Soil	MRRARKIGAVDQDGNLVTIPRLPSVTNADKPAGWQRWSDAEKVQHLLGLSLDRMHDYLSWPPDNLDPHRLTAQAQASRVVAMIAARVGVEARRSREREQALQALVRDLPDRYKPKPPG*
Ga0126381_1023576491	3300010376	Tropical Forest Soil	MAGSPLRRARKIGAVEPDGDLVTIPRLPRVAGTDKPPGWKRWSDAEKVQHLLGLSLDRMHDYLSWPPDNLDPHRLAAQTQAARVVTMVAARVGVEARRSREREHVLNALVRDLPDRFKPQRPG*
Ga0126381_1027401222	3300010376	Tropical Forest Soil	AGVDQEGKVVSSPRLPAVTNACKPPGWDRGGDAEKVQHLLGLSLDRMHDYLSWPPDNLDPHRLAAQTQAARVVTMIAARAGVEARRSREREKALQALIRDLPDRFKPRRPG*
Ga0126381_1037836461	3300010376	Tropical Forest Soil	MRKLRKTAAVDQDGNVVIIPRLPSVAGSNKPPGWNRWSPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARHRDRERILAEL
Ga0126381_1039907811	3300010376	Tropical Forest Soil	MRKLRKIGAVDQDGNVVTIPRLPSVTGANKPPDWNRWSSAEKAEHLLGLSLDRMHDYLSWSADDLDPHRLAAQTQVIRVVAMVAAKVGGEAARERNRERILEELARREFGDEA*
Ga0126383_124092421	3300010398	Tropical Forest Soil	MRRLRKTGAVDENGNLVTIPRLPSVTGANKPPGWNRWSAAEKAQHLLDMSLDRMHDYLSWPADELDPHRLAAQTQVIRVIAVVAAKVGDEARRERDRERILEELHRDMDAR*
Ga0126383_134088201	3300010398	Tropical Forest Soil	MRKLRKTGAVDHDGNVITIPRLPSVTGANRPPGWNHWGAAEKAQHLLGMSLDRIHDYLSWPADNLDPYRLAAQTQVIRVVAMVAAKVGDEARRERDKERVLGELIDSLE
Ga0126369_103746031	3300012971	Tropical Forest Soil	MATSATRKLRKTGAVDQDGSLVTIPRLPSISGANKPPGWNRWSAAEKVEHLLGLSLDRMRDYLSWPPDNLDPYRLAAQTQVIRVVAMIAAKVGVAARDRDRERIIAELAGREDEEA*
Ga0182041_100780403	3300016294	Soil	MPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARDRERQRILE
Ga0182035_102475241	3300016341	Soil	MRKLRKTGSVDQDGNVITIPRLPSVAGSNKPPGWNLWGPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKSGVKLPASASDNASSQR
Ga0182035_118128332	3300016341	Soil	EDGNVVTIPRLPSVTGSNKPPGWKRWSPAEKAEHLMGLSLDRMHEYLSWPADELDPYRLAAQTQVIRVVVMVAAKVGDEARLQRDRQRILAELAAKEFGASNKG
Ga0182032_110571231	3300016357	Soil	KLRKTGAVDQDGNLVTIPRLPSVSGSNKPPGWNRWSPAEKAEHLLGLSLDRMPEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARDRERQRILE
Ga0182032_114037041	3300016357	Soil	CPSAEHQPHIAVMASSPMRKLRKTGAVDPDGNVVTIPRLPSVTGPRKPSGWSRWSAAEKVEHLLGMSLDRMHDYLAWPADDLDPYRLAAQTQVIRVVAMVAAKVGVEARRNRDRERIVAQMAREFRDSDGHRVQERDRG
Ga0182038_103472072	3300016445	Soil	MRKLRKTGSVDQDGNVITIPRLPSVAGSNKPPGWNLWGPAEKAEHLLGLSLDRMHDYLSCPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERQRILSEMTQREFRDGA
Ga0182038_118874051	3300016445	Soil	MRKLRKTGAIDQDGQVVTIPRLPSVAGANKPPDWNRWSAAEKAQHLLGMSLDRMHGYLAWPADDLDPYRLAAQTQVIRVVAMVAAKVGDEARRERDRDRALSQLI
Ga0210407_101931681	3300020579	Soil	MRKLRKTGAIDEDGNLVTIPRLPSVTGANKPPGWNRWSAAEKVQHLLGLSLDRMNDYLSWPADGLDPYRLAAQTQVIRVVAVVAAKVGGEAARERDRSGCSASS
Ga0210403_108002011	3300020580	Soil	MRKLRKTGVADQDGNVVTIPRLPSVTGTHKPPGWNRWSASEKVEHLLGLSLDRMLDYLSWPADGLDPYRLAAQTQVVRVVAMVAAKVGVEARRERDRERVLADLARRFRGELDGAAPEA
Ga0210403_109422941	3300020580	Soil	MRKLRKTGAVDTDGNVVTIPRLPSVTGAHKPPGWNRWSAAEKAEHLLGMSLDRMHDYLSWPADRLDPYRLAAQAQVIRVVAVVAAKVGDEARRERDRQRLLGELIRGFEEAARK
Ga0210401_110399011	3300020583	Soil	MRKLRKTGAVDQDGKVVTIPRLPSVTGSDKPRGWNRWSPAEKAEHLLGLSLDRMHDYLSWPADGLDPYRLAAQTQVIRVVAMVAAKVGVEARRERDRERV
Ga0210389_114313641	3300021404	Soil	RKTGAVDEHGNLVTIPRLPSVTGANKPPDWNRWSAAEKAQHLLGMSLDRMHDYLAWPADDLDPHRLAAQTQVICVVAMVAAKVGDEARRERNRDRILGELIDGLDERAARRS
Ga0187846_100199724	3300021476	Biofilm	MPSSPIRKLRKTGAVDQDDNVITIPRLPSFAGSNKPPGWNRWSPAEKAEHLLGLSLLSMHDYLSWPADDLDPHRLAAQTQVIRVVAMVAAKVGDAARLERDRQRILEELSAKEFPGGGRGCGN
Ga0126371_106972732	3300021560	Tropical Forest Soil	RLPHTPVMACSRMRKLRKTGAVDQDGNVVIIPRLPSVAGSNKPPGWNRWSPAEKAEHLLGLSLDRMREYLSWPAGDLDPYRLAAQTQVIRVVAMVTTKVGVEARRERERERILSEMTRREFGDDPSDRTGKNRPRAEGR
Ga0126371_116857272	3300021560	Tropical Forest Soil	MRKLRKTAAIDQDGSVITIPRLPPVAGANKPSGWDRWSDAEKVEHLLGLTLDRMHDYLSWSPGNLDPHRLAAQTQAVRVITMVAAKAGVEARRSREREQALQALVRDLPEGYRPRRLG
Ga0126371_116950672	3300021560	Tropical Forest Soil	DWRRPHTSIMASSPMRKLRKTGAVDQDGSLVTIPRLPSISGANKPPGWNRRSAAEKVEHLLGLSLDRMRDYLSWPPDNLDPYRLSAQTQVIRVVAMIAAKVGVAARDRDRERLIAELAQREDEEA
Ga0126371_119161772	3300021560	Tropical Forest Soil	MRRARKIGAVDQDGNLVTIPRLPSVTNADKPAGWQRWSDAEKVEHLLGLSLDRMHDYLSWPPDNLDPHRLTAQAQAARVVAMIAARVGVEARRSRERDEALARLVESLPDRYKPR
Ga0126371_120223802	3300021560	Tropical Forest Soil	APQCANCEKTSAVDQDGKLITIPRLPSVTGANKPLGWSRWSAAEKAEQLLGLSLNRMHEYLSWPADDLDPYRLAAQTQVIRVVAMVGAKVGDEARERQRQRTAQELLRKIEAEDRSLETTPKTPAS
Ga0126371_121450581	3300021560	Tropical Forest Soil	MRKLRKTGAVDQDGNVVTIPRLPSVAGSNKPPGWKRWSPAEKAEHLLGLSLDRMHDYLSWSADDLDPHRLAAQTQVIRVVVMVAAKVRDEARLQRDRDRMLAELSAREFGSAP
Ga0126371_125728531	3300021560	Tropical Forest Soil	MRKLRRTGAVDQDGNVVTIPRLPSVAGSNKPPGWNRWSPAERVEHLLGLSLDRMHDYLSWPADGLDPYRLAAQTQVIRVVAIVAAKVGVEARRERERDRILSDLARREFGDDT
Ga0126371_131514941	3300021560	Tropical Forest Soil	MRKLRKTRAVDQDGKLITIPRLPSVTGANKPPGWNRWSAAEKVEHLLGLSLDRMNDYLSWPADNLDPYRLAAQTQVIRVVAMVGAKVGDQAQRERRRQRTVQKLLRKIEAEDRSLEKP
Ga0126371_131954221	3300021560	Tropical Forest Soil	MAGSPLRRARKIGTVDPDGNLVTIPRLPPVAGADKPSGWDRWSEAEKVQHLLGLSLDRMHDYLSWPPDNLDPHRLAAQTQAARVVTMVAARVGVE
Ga0170834_1069275301	3300031057	Forest Soil	RKTGAVDRDGNVVTVPRLPSVTGAHKSPGWNRWSAAEKAEHLLGLSLDRMHDYLSWPADSLDPYRLAAQTQVVRVIAMVAAKVGGEAARERDRNACLAS
Ga0170834_1093276011	3300031057	Forest Soil	MHKLRKTGAVDPDGNVVTIPRLPSVTGAHKPPGWNRWSAAEKVEHLLGLSLDRMHDYLSWPADSLDPYRLAAQTQVIRVVVMVAAKVGDEARRERERERLL
Ga0170824_1059164912	3300031231	Forest Soil	MRKLRKTGAVDTDGNVVTIPRLPSVTGAHKPPGWNRWSAAEKAEHLLGLSLDRMHDYLSWPADGLDPYRLAAQTQVVRVIAMVAAKVGGDAARERDRILGE
Ga0170824_1120350702	3300031231	Forest Soil	MRKLRKTGAVDQDGNLVTIPRLPSVTGANKPPGWNRWSAAEKVEHLLGLSLDRMRDYLSWPADDLDPYRLAAQTQVIRVVAVVAAKVGVEARRERDRERLLAEMARCEFGTSNQA
Ga0170818_1105026281	3300031474	Forest Soil	MPSSLMRRLRNTGAVDQDGNIVTIPRLPSVMGAHKPPGWSRWSAVEYLLGMSLDRMHDYLSWPADGLDPYRLAAQTQVVRVIAMVAAKVGGEAARERDRQRVLGELIRAFESEEHRART
Ga0318516_107012651	3300031543	Soil	MPCFRAGCRHIVGPMPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYLSWPADDLDPYRLAAQTQVIRVVAMVGAKVEDQARRERQGERTVAALVRKLPP
Ga0318528_100036414	3300031561	Soil	MRKLRKTGSVDQDGNVITIPRLPSVAGSNKPPGWNLWGPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERQRILSEMTQREFRDGA
Ga0318528_102230742	3300031561	Soil	MPCFRAGCRHIVGPMPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGVEARRDRERQRILEALTRREFGASGEQ
Ga0318573_104435832	3300031564	Soil	MPCFRAGCRHIVGPMPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYGSWPADDLDPYRLAAQTQVIRVVAMVAAKVGVEARRDRERQRILEPPR
Ga0318555_102582172	3300031640	Soil	MPCFRAGCRHIVGPMPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYLSWPADDLDPYRLAAQTQVIRVVAMVDAKVGVEARRDRERQRILEALTRREFGASGEQ
Ga0318542_102868122	3300031668	Soil	MRKLRKTGSVDQDGNVITIPRLPSVAGSNKPPGWNLWGPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERQRILSEMTQREF
Ga0318561_101565532	3300031679	Soil	MPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGVEARRDRERQRILEALTRREFGASGEQ
Ga0310686_1155488312	3300031708	Soil	MPGSPMRKLRKTGAVDGDGNVVALPRLPSVTGAHNPPGWNRWSAAEKVEHLLGMSLDCMHDYLSWPADGLDPYRLAAQAQVIRVVAMVAAKVGVEARRERDRERVLQALSPGLRARLRDGAAPET
Ga0307474_111203281	3300031718	Hardwood Forest Soil	MASSLMRKLRKTGAVDADGNVVTIPRLPSVTGAHKPPGWNRWSAAEKVEHLLGMSLDRMHDYLSWPADGLDPYRLAAQAQVIRVVAMVAAKVGIEARRERVRDRTLEKLSLGLRARLRDGAAPET
Ga0306918_101301652	3300031744	Soil	MRKLRKTGAVDQDGNLVTIPRLPSVSGSNKPPGWNRWSPAEKAEHLLGLSLDRMPEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARDRERQRILE
Ga0306918_109400591	3300031744	Soil	MRKLRKTGAVDEDGNVVTIPRLPSVTGSNKPPGWKRWSPAEKAEHLMGLSLDRMHEYLSWPADELDPYRLAAQTQVIRVVVMVAAKVGDEARLQRDRQRILAELAAKEFGASNKG
Ga0306918_110795201	3300031744	Soil	MRKLRKTGAVDQDGNIVTIPRLPSVAGSNKPPGWNRWSPAERVEHLLGLSLDRMHEYLSWPADDLDPHRLAAQTQVIRVVAMVATKVGVDARRKRDRDRILSEMTRREFGDEA
Ga0307475_108509251	3300031754	Hardwood Forest Soil	VVTLPRLPSVTGAHKPPGWNRWSAAEKVEHLLGMSLDRMHDYLSWPADGLDPYRLAAQAQVIRVVAMVAAKVGVEARRERVRDRVLEKLSLGLRARLRDGAAPET
Ga0318568_106255062	3300031819	Soil	SSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGVEARRDRERQRILEALTRREFGASGEQ
Ga0318511_100685591	3300031845	Soil	QDGNVITIPRLPSVAGSNKPPGWNLWGPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERQRILSEMTQREFRDGA
Ga0306925_114478521	3300031890	Soil	MRKLRKTGAVDQDGNIVTIPRLPAVAGSNRPPGWKRWSPAEKAEHLLGLSLDRMHEYLSWPANDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERQRILS
Ga0318551_104052852	3300031896	Soil	MASLPMRKLRKTGAVDRDGNVVIIRRPSVAGSHKPPGWNRWSPAEKVEHLLGLSLDRMHDYLSWPADDLDPHRLAAQTQVIRVVAIMTAKVGDEAARQRSDNI
Ga0306923_107155892	3300031910	Soil	MVAVRGLRWAAPRLPSIKPPGWNRWSPAEKAEHLLGLSLDRMHKYLPWPADELDPYRLAAQTQVIRVVAMVAAKVWREAARERERQRVLQELAAREFGSGP
Ga0306923_109747872	3300031910	Soil	MRKLRKTGAVDQDGNIVTIPRLPSVAGSNKPPGWNRWSPAERVEHLLGLSLDRMHDYLSWPADGLDPYRLAAQTQVIRVVAMVAAKVGVEAHRERERERILSEMTRREFGDDA
Ga0306923_115510181	3300031910	Soil	MRKLRKTGAVDQDGDVVTIPRLPSVTGSNKPPGWTRWSPAEKAEHLLGLSLDRMNDYLSWPADELDAYRLAAQTQVIRVVVMVAAKVGGEAARERERERILSEMTRREFGAGDEA
Ga0306921_101918733	3300031912	Soil	MPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYGSWPADDLDPYRLAAQTQVIRVVAMVAAKVGVEARRDRERQRILEALTRREFGASGEQ
Ga0306921_106382242	3300031912	Soil	MRKLRKTGAVDEDGNVVTIPRLPSVTGSNKPPGWKRWSPAEKAEHLMGLSLDRMHEYLSWPADELDPYRLAAQTQVIRVVVMVAAKVGGEAARGRERERLLSEMRRREFGDDA
Ga0306921_115521332	3300031912	Soil	MRKLRKTGAVDQDGNIVTIPRLPTVVGSNKPPGWNRWSPAERVEHLLGLSLDRIHDYLSWPADGLDPYRLAAQTQVIRVVAMVAAKVGVEAHRERERQRILSEMTRREFGDDA
Ga0306921_119697802	3300031912	Soil	AMASSPIRKLRRTGAVDTDGNVLTIPRLPSVTGAHKPLGWNRWCAAERAEHLLSMSLDRMHDYPSWPADGFDPYRLAAQGQVIRVVAMVAAKVGDEARRERDRKRVLAELMRSEFGTSNK
Ga0310912_103390621	3300031941	Soil	GWMPCFRAGCRHIVGPMPSSPIRKLRKTGAVDQDGNVVTIPRLPSVVGSNKPPDWNRWSPAEKAEHLLGLNLDGMHEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARDRERQRILE
Ga0310912_112882701	3300031941	Soil	RSPATYPVMASSPMRKLRKTGAVDEDGNVVTIPRLPSVTGSNKPPGWKRWSPAEKAEHLMGLSLDRMHEYLSWPADELDPYRLAAQTQVIRVVVMVAAKVGGEAARGRERERLLSEMRRREFGDDA
Ga0310913_109551711	3300031945	Soil	MRKLRKTGAVDEDGNVVTIPRLPSVTGSNKPPGWKRWSPAEKAEHLMGLSLDRMHEYLSWPADELDPYRLAAQTQVIRVVVMVAAKVGDEARLQRDRQRILAELAA
Ga0310910_105539592	3300031946	Soil	MRKLRRTGAVDTDGNVLTIPRLPSVTGAHKPLGWNRWCAAERAEHLLSMSLDRMHDYPSWPADGFDPYRLAAQGQVIRVVAMVAAKVGDEARRERDRKRVLAELMRSEFGTSNKA
Ga0310909_108345461	3300031947	Soil	MASLPMRKLRKTGAVDRDGNVVIIPRPSVAGSNKPPGWNRWSPAEKVEHLLGLSLDRMHDYLSWPADDLDPHRLAAQTQVIRVVAMVAAKVGDEAARECDRERIRGELLRGFEERAARDA
Ga0306926_117083362	3300031954	Soil	MRKLRKTGAVDQDGNVVTIPRLPSVAGSNKPPGWNRWSPAEKAEHLLGLSLDRMHEYLSWPADDLDPHRLAAQTQVIRVVAMVATKVGVDARRKRDRDRILSEMTRREFGDEA
Ga0307479_116812701	3300031962	Hardwood Forest Soil	MRKLRKTGAVDRDGNVVSIPRLPSVTGAHKPPGWNRWSAAEKVEHLLGMSLDRMHDYLSWPADGLDPYRLAAQAQVIRVVAMVAAKVGVEARRERVRDRVLEKLSLGLRARLRDGAAPET
Ga0306922_107440241	3300032001	Soil	GARHACLGYGRPPHTPVMASSPMRKLRKTGAVDQDGNVVTIPRLPSVTASNKPPGWKRWSPAEKAEHLLGLSLDRMHEYLSWPADDLDPYRLAAQTQVIRVVVMVAAKVGDEARLQRDRQRILAELAAKEFGASNKG
Ga0318506_101251472	3300032052	Soil	MASLPMRKLRKTGAVDRDGNVVIIPRPSVAGSNKPPGWNRWSPAEKVEHLLGLSLDRMHDYLSWPADELDPYRLAAQTQVIRVVAMVAAKVGVEARRDRERQRILEALTRREFGASGEQ
Ga0318514_104705171	3300032066	Soil	MRKLRKTGSVDQDGNVITIPRLPSVAGSNKPPGWNLWGPAEKAEHLLGLSLDRMHDYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGGEAARERERRRILSEMTQREFRDGA
Ga0306924_116936312	3300032076	Soil	MRKLRKNGAVDQDGNVVTIARLPSISGSNKPPGWNRWSPAEKAEHLLGLSLDRMHDYLSWPADELDPYRLAAQTQVIRVVAMVAAKVWREAARERERQRVLQELAAREFGSGP
Ga0306920_1020145221	3300032261	Soil	MRRLRKTGAVDQDGNIVTIPRLPAVAGSNKPPGWNRRSSAEKAEHLLGLSLDRMHEYLSWPADDLDPYRLAAQTQVIRVVAMVAAKVGVEAHRERERERILSEMTRREFGDGA
Ga0306920_1036048631	3300032261	Soil	PVMASCPMRKLRKTGAVDQDGNIVTIPRLPSVVGSNKPPGWNRWSPAERVEHLLGLSLDRMHDYLSWPADGLDPYRLAAQTQVIRVVAMVAAKVGVEAHRERERQRILSEMTRREFGDDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094702

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences