Metagenome / Metatranscriptome Family F094589

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094589
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	80 residues
Representative Sequence	MNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT
Number of Associated Samples	84
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.95 %
% of genes near scaffold ends (potentially truncated)	77.36 %
% of genes from short scaffolds (< 2000 bps)	94.34 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.698 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.170 % of family members)
Environment Ontology (ENVO)	Unclassified (64.151 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.283 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.92% β-sheet: 17.48% Coil/Unstructured: 46.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13683	rve_3	7.55
PF00908	dTDP_sugar_isom	5.66
PF01527	HTH_Tnp_1	5.66
PF16363	GDP_Man_Dehyd	4.72
PF02706	Wzz	2.83
PF13701	DDE_Tnp_1_4	2.83
PF13751	DDE_Tnp_1_6	1.89
PF00872	Transposase_mut	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	5.66
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	2.83
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	2.83
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	2.83
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	2.83
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
All Organisms	root	All Organisms	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
cellular organisms	root	All Organisms → cellular organisms	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.15 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.89 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.66 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.89 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.83 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	1.89 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Nitrosomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas	1.89 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.94 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Nitrosomonas ureae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas ureae	1.89 %
Phyllobacterium salinisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium salinisoli	0.94 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	0.94 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.70 %
Nitrosomonas ureae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas ureae	1.89 %
Bradyrhizobium sp. C-145	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	0.94 %
Phyllobacterium salinisoli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium salinisoli	0.94 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002HZ0MU	Not Available	501	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10049708	Not Available	1092	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10168612	Not Available	521	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1100165	Not Available	508	Open in IMG/M
3300002914\|JGI25617J43924_10336014	Not Available	523	Open in IMG/M
3300002917\|JGI25616J43925_10305827	Not Available	591	Open in IMG/M
3300005764\|Ga0066903_109064630	Not Available	503	Open in IMG/M
3300010043\|Ga0126380_12084401	Not Available	521	Open in IMG/M
3300010046\|Ga0126384_10913821	Not Available	794	Open in IMG/M
3300010361\|Ga0126378_10264524	Not Available	1816	Open in IMG/M
3300010366\|Ga0126379_10773764	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300010366\|Ga0126379_11222359	Not Available	858	Open in IMG/M
3300010375\|Ga0105239_11594353	Not Available	755	Open in IMG/M
3300010398\|Ga0126383_10513713	Not Available	1258	Open in IMG/M
3300010398\|Ga0126383_10925928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	958	Open in IMG/M
3300010863\|Ga0124850_1072819	Not Available	1040	Open in IMG/M
3300012180\|Ga0153974_1044168	Not Available	974	Open in IMG/M
3300012202\|Ga0137363_10387773	Not Available	1162	Open in IMG/M
3300012923\|Ga0137359_10273992	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300012924\|Ga0137413_11331334	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300012929\|Ga0137404_12114743	Not Available	526	Open in IMG/M
3300012930\|Ga0137407_12134647	Not Available	535	Open in IMG/M
3300012948\|Ga0126375_11208577	Not Available	629	Open in IMG/M
3300012961\|Ga0164302_11173373	Not Available	612	Open in IMG/M
3300012989\|Ga0164305_11121168	Not Available	677	Open in IMG/M
3300015371\|Ga0132258_10617717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	2723	Open in IMG/M
3300016319\|Ga0182033_10628611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300016319\|Ga0182033_11425432	Not Available	624	Open in IMG/M
3300016357\|Ga0182032_11253071	Not Available	639	Open in IMG/M
3300016357\|Ga0182032_12057423	Not Available	501	Open in IMG/M
3300016387\|Ga0182040_10886911	Not Available	739	Open in IMG/M
3300016387\|Ga0182040_11636801	Not Available	549	Open in IMG/M
3300016404\|Ga0182037_10758204	Not Available	834	Open in IMG/M
3300016404\|Ga0182037_11166416	Not Available	676	Open in IMG/M
3300016404\|Ga0182037_11309733	Not Available	639	Open in IMG/M
3300016422\|Ga0182039_11197601	Not Available	686	Open in IMG/M
3300020583\|Ga0210401_11452988	Not Available	543	Open in IMG/M
3300021171\|Ga0210405_10582681	Not Available	872	Open in IMG/M
3300021178\|Ga0210408_10985619	Not Available	653	Open in IMG/M
3300021475\|Ga0210392_11419408	Not Available	519	Open in IMG/M
3300025933\|Ga0207706_11096798	Not Available	665	Open in IMG/M
3300026555\|Ga0179593_1039471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2335	Open in IMG/M
3300027047\|Ga0208730_1002911	All Organisms → cellular organisms → Bacteria → Proteobacteria	1589	Open in IMG/M
3300027629\|Ga0209422_1126579	Not Available	582	Open in IMG/M
3300030986\|Ga0308154_107132	Not Available	686	Open in IMG/M
3300030997\|Ga0073997_12229384	Not Available	844	Open in IMG/M
3300031543\|Ga0318516_10262384	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300031543\|Ga0318516_10458776	Not Available	732	Open in IMG/M
3300031545\|Ga0318541_10268645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	949	Open in IMG/M
3300031545\|Ga0318541_10461553	Not Available	710	Open in IMG/M
3300031546\|Ga0318538_10292135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300031546\|Ga0318538_10810511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas ureae	508	Open in IMG/M
3300031564\|Ga0318573_10071189	Not Available	1738	Open in IMG/M
3300031572\|Ga0318515_10684506	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031679\|Ga0318561_10073460	Not Available	1756	Open in IMG/M
3300031681\|Ga0318572_10204783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300031713\|Ga0318496_10080773	Not Available	1723	Open in IMG/M
3300031715\|Ga0307476_10926294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	643	Open in IMG/M
3300031719\|Ga0306917_10336050	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300031736\|Ga0318501_10729146	Not Available	547	Open in IMG/M
3300031744\|Ga0306918_10040460	Not Available	3027	Open in IMG/M
3300031744\|Ga0306918_10336264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1169	Open in IMG/M
3300031744\|Ga0306918_11279916	Not Available	564	Open in IMG/M
3300031751\|Ga0318494_10094075	Not Available	1644	Open in IMG/M
3300031765\|Ga0318554_10242911	Not Available	1025	Open in IMG/M
3300031769\|Ga0318526_10224175	Not Available	769	Open in IMG/M
3300031771\|Ga0318546_10676917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → Nitrosomonas ureae	726	Open in IMG/M
3300031771\|Ga0318546_10796252	Not Available	665	Open in IMG/M
3300031771\|Ga0318546_10940061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300031779\|Ga0318566_10461654	Not Available	623	Open in IMG/M
3300031781\|Ga0318547_10317989	Not Available	947	Open in IMG/M
3300031781\|Ga0318547_10846182	Not Available	570	Open in IMG/M
3300031793\|Ga0318548_10101856	Not Available	1375	Open in IMG/M
3300031805\|Ga0318497_10880925	Not Available	502	Open in IMG/M
3300031821\|Ga0318567_10694014	Not Available	577	Open in IMG/M
3300031832\|Ga0318499_10034701	Not Available	1837	Open in IMG/M
3300031832\|Ga0318499_10239680	Not Available	705	Open in IMG/M
3300031833\|Ga0310917_10745160	Not Available	662	Open in IMG/M
3300031835\|Ga0318517_10058346	Not Available	1631	Open in IMG/M
3300031846\|Ga0318512_10151514	Not Available	1119	Open in IMG/M
3300031879\|Ga0306919_10869897	Not Available	691	Open in IMG/M
3300031880\|Ga0318544_10034660	Not Available	1770	Open in IMG/M
3300031890\|Ga0306925_10171087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium salinisoli	2340	Open in IMG/M
3300031894\|Ga0318522_10024949	All Organisms → cellular organisms → Bacteria → Proteobacteria	1977	Open in IMG/M
3300031896\|Ga0318551_10217875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300031897\|Ga0318520_10571916	Not Available	701	Open in IMG/M
3300031910\|Ga0306923_10320225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	1770	Open in IMG/M
3300031910\|Ga0306923_10451123	Not Available	1459	Open in IMG/M
3300031910\|Ga0306923_10584341	Not Available	1255	Open in IMG/M
3300031912\|Ga0306921_10281030	All Organisms → cellular organisms → Bacteria → Proteobacteria	1949	Open in IMG/M
3300031941\|Ga0310912_10330637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
3300031941\|Ga0310912_11086808	Not Available	611	Open in IMG/M
3300031945\|Ga0310913_10071124	Not Available	2305	Open in IMG/M
3300031945\|Ga0310913_10568346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300031959\|Ga0318530_10362532	Not Available	600	Open in IMG/M
3300031981\|Ga0318531_10141461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1075	Open in IMG/M
3300032001\|Ga0306922_10483725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1320	Open in IMG/M
3300032041\|Ga0318549_10577212	Not Available	505	Open in IMG/M
3300032051\|Ga0318532_10087589	Not Available	1093	Open in IMG/M
3300032066\|Ga0318514_10507291	Not Available	642	Open in IMG/M
3300032076\|Ga0306924_11703856	Not Available	660	Open in IMG/M
3300032094\|Ga0318540_10436643	Not Available	632	Open in IMG/M
3300032261\|Ga0306920_101424115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300033290\|Ga0318519_10184111	Not Available	1184	Open in IMG/M
3300033290\|Ga0318519_10203413	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.23%
Host-Associated	Host-Associated	3.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.28%
Plants	Host-Associated → Plants	2.83%
Aquatic	Environmental → Aquatic	0.94%
Fungi	Host-Associated → Fungi	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Sediment	Environmental → Aquatic → Sediment	0.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%
Mycelium	Host-Associated → Fungi → Mycelium	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.51%
Loam	Environmental → Terrestrial → Soil → Loam	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.94%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_06766010	2170459003	Grass Soil	PVEQAQTPTPHQEREKRMNEVGLANFAIRMRYKGEERATELPLTDDMIRQLAFEAELRDMRIGELIGELMVAMLKKDLFQAVLPREKQNNSIEIT
AF_2010_repII_A1DRAFT_100497083	3300000597	Forest Soil	HQERAKKMNEVGSASFAIRMRYKGEERTTELPLTHDMITQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK*
AF_2010_repII_A1DRAFT_101686122	3300000597	Forest Soil	MNEVGLANFAIRMLYKGEERTTELPLTHDMISQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDNGIQTP*
AF_2010_repII_A100DRAFT_11001651	3300000655	Forest Soil	MNEVGLANFAIRMRYKDEERTTELPLTHDMIRQLAFEAELRNMRIGELVGELMVAMLEKD
JGI25617J43924_103360141	3300002914	Grasslands Soil	RAKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAEFRNMRIGELIGQLMVAMLKKDLFHTVLQREEPNNGT*
JGI25616J43925_103058271	3300002917	Grasslands Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAEFRNMRIGELIGQLMVAMLKKDLFHTVLQREEPNNGT*
Ga0066903_1090646301	3300005764	Tropical Forest Soil	QAQTPTPDQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGTRTP*
Ga0126380_120844011	3300010043	Tropical Forest Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT*
Ga0126384_109138212	3300010046	Tropical Forest Soil	EVGSASFAIRMRYKGEERTTELPLTHDMIMQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK*
Ga0126378_102645242	3300010361	Tropical Forest Soil	MNEVGSASFAIRMRYKGEERTTELPLTHDMITQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK*
Ga0126379_107737641	3300010366	Tropical Forest Soil	MGSANFAIRMRYKGEERTTELPLTQDMIRQLAFEAELRNMRIGELIGKLMVAMLKKDIFQAVLKQKKPDHGVQTP*
Ga0126379_112223592	3300010366	Tropical Forest Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVAMLKKDLFQRVLQREEPNNGTYTP*
Ga0105239_115943531	3300010375	Corn Rhizosphere	MNEVGLANFAIRMRYKGEERTTELPLTHDVIRQLAFEAELRDMRIGELIGELMIGILRKDLLQAVLPAEARK*
Ga0126383_105137134	3300010398	Tropical Forest Soil	MNEGGSANFAIRMQYKGEERTIELPLTQDMIGQLAFEAELRNMRIGELIGELTVAILKKDLFQTVLQREEPN*
Ga0126383_109259281	3300010398	Tropical Forest Soil	MNEVGSANFAIRMQYKGEERTTELPLTQDMIRQLAFEAELRNMRIGELIGELMGAILKKDLFQTVLQREEPN*
Ga0124850_10728191	3300010863	Tropical Forest Soil	MNEVGSASFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVAMLKKDLFQTVLQREEPK*
Ga0153974_10441681	3300012180	Attine Ant Fungus Gardens	EQAQAPTPHQERAKRANEIGSANFAIRMQYKGEERTTDLPLTQDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDHGVQTP*
Ga0137363_103877731	3300012202	Vadose Zone Soil	MNEVGSASFAIRMRYKGEERTTELPLTHDMIGQLALEADLRNMRIGELIGELMVAMLKKDLF
Ga0137359_102739923	3300012923	Vadose Zone Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVAMLKKDLFHTVLQREEPSNGT*
Ga0137413_113313341	3300012924	Vadose Zone Soil	QERAKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVAMLKKDLFHTVLQREEPSNGT*
Ga0137404_121147431	3300012929	Vadose Zone Soil	TPTAHQERAKRMNEAGSANFAIRMRYKGEERTTELPLSHDMIRQLAFEAELRNMRIGELISELMVAMLTKDLFQAVLEQKKPDNGVQTP*
Ga0137407_121346471	3300012930	Vadose Zone Soil	MNEAGSANFAIRMRYKGGERTTELPLTQDMTRQLAFEAELRNMRIGELISELMVAMLTKDLFQAVLEQKKPDNGVQTP*
Ga0126375_112085772	3300012948	Tropical Forest Soil	ASFAIRMRYKGEERTTELPLTHDMITQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK*
Ga0164302_111733731	3300012961	Soil	MNEVGLANFAIRMRYKGEERTIELPLTHDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLPRKK*
Ga0164305_111211681	3300012989	Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLPRKK*
Ga0132258_106177172	3300015371	Arabidopsis Rhizosphere	MGSANFAIRMQYRGEERTTDLPLTQDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDNGVQTP*
Ga0182033_106286111	3300016319	Soil	PVEQAQAPTPQQDRAKRANEVGWANFAIRMQYKGEERTTELPLTQDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDNGIQTP
Ga0182033_114254321	3300016319	Soil	MGSVNFAIRMQYRGEERTTDLPLTQDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDHGVQTP
Ga0182032_112530711	3300016357	Soil	ANFAIRMRYKGEERATELPLTHDMIRQLAFEAELRNMRIGELIGELIVGMLKKNLFQAALPRESKKIVAQRCDLP
Ga0182032_120574232	3300016357	Soil	EQAQTPTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELTGELIVAMLKKDLFQTVLQWEEPK
Ga0182040_108869113	3300016387	Soil	HQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELTGELIVAMLKKDLFQTVLQWEEPK
Ga0182040_116368011	3300016387	Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVVMLKKDLFQTVLQREELNAAGRAQ
Ga0182037_107582041	3300016404	Soil	NSQSAPVEQAQTPTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT
Ga0182037_111664161	3300016404	Soil	QAPTPHQERAGRTNEVGSANSAIRMQYKGEERTTELPLTQDMIRQLAFEAELHNMRIGELVGELMVAMLKKDLFQAVLEHEKPDNGIQTP
Ga0182037_113097331	3300016404	Soil	NSQSAPVEQAQTPTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGTYTP
Ga0182039_111976012	3300016422	Soil	NSQSAPVEQAQTPTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVAMLKKDLFQRVLQREEPNNGT
Ga0184609_102049703	3300018076	Groundwater Sediment	ACQGHAQTANEGRPGVANFAIRLQCRGRERTTELPLTQQVVRQLAFEAVLRNMRIGELVGEVIVAILKKKDLLQAVLEQKEPDKGISTP
Ga0210401_114529881	3300020583	Soil	TPHQEGAKRMNEVGLANFAIRMRYKGEERTIELPLTHDMIRQLAFEAELRNMRIGELIGELMVGMLKKDLFQAVLPREKRNGTEM
Ga0210405_105826812	3300021171	Soil	MNEVGLANFAIRMRYKGEERATELPLTDDMIRQLAFEAELRDMRIGELIGELMVAMLKKDLFQAVLPREKQNNSIEIT
Ga0210408_109856192	3300021178	Soil	MNEVGLANFAIRMRYKGEERTIELPLTHDMIRQLAFEAELRNMRIGELIGELMVGMLKKDLFQAVLPREKRNGTEM
Ga0210392_114194082	3300021475	Soil	VEQCQTPTPHQEGAKRMNEVGLANFAIRMRYKGEERTIELPLTHDMIRQLAFEAELRNMRIGELIGELMVGMLKKDLFQAVLPREKRNGTEM
Ga0207706_110967981	3300025933	Corn Rhizosphere	ERAKRMNEVGLANFVIRMQYKGEERTTELSLTHDMIEQLAFEAELRDMRIGELIGELIVAMLKKDLFQAVFPREN
Ga0179593_10394712	3300026555	Vadose Zone Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVAMLKKDLFHTVAAAGRAQ
Ga0208730_10029113	3300027047	Forest Soil	NEVGLANFAIRMRYKGEERTIELPLTHDMIRQLAFEAELRNMRIGELIGELMVGMLKKDLFQAVLPREKQNNGTEM
Ga0209422_11265792	3300027629	Forest Soil	MNEVGLANFAIRMRYKGEERATELPLTDDMIRQLAFEAELRDMRIGELIGELMVAMLKKDLFQAVLPREKQNNSTEIT
Ga0308154_1071321	3300030986	Soil	NFAIRLQCRGRERTTELPLTQQVVRQLAFEAQLRNMRIGELVGEVIVAMLKKDLLQAVLEQKEPDKGISTR
Ga0073997_122293842	3300030997	Soil	MLEAGSAKFAIRMQYKGEERATELLLTHDMIAQLGLEAEVRHMRIGELIAELIAAAVKKDLFQPG
Ga0318516_102623842	3300031543	Soil	LTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT
Ga0318516_104587763	3300031543	Soil	RMNEVGSANFAIRMRYKGEERTTELPLSHGMIRQLAFEAALRNMRIGELIGELMAAMLEKDLFQTVLQREEPK
Ga0318541_102686451	3300031545	Soil	ANEVGSANFAIRMQYKGKERTTELPLTQDMIRQLAFEAMLRNMRIGELIGELMVAMLKKDLFQAVLEQRAGS
Ga0318541_104615532	3300031545	Soil	MNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGTYTP
Ga0318538_102921352	3300031546	Soil	AAVEQAQTPTAHQERAKTMNEAGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAELRNMRIGELIGELMVVMLKKDLFQAVLQREKANNGTQTP
Ga0318538_108105112	3300031546	Soil	IRMRYKGEERTTELPLTHDMIRQLAFEAVLRNMRIGELIGELLVAMLTKDLFQAVLQQEKPDNGVQTP
Ga0318573_100711891	3300031564	Soil	PVEQAQTPTPHQERAKKMNEVGSASFAIRMRYKGEERTTELPLTHDMIMQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQPPSNFPSPC
Ga0318515_106845061	3300031572	Soil	KRANEAGAAHFAIRMQYKGDERTTELPLTPDMIRQLAFEAELRDMRIGELIGQLMVAMLKKDLFQAVLEQKKPANGIQMP
Ga0318561_100734603	3300031679	Soil	VGSASFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGGLIGELMAAILKKDLFQTVLQREEPK
Ga0318572_102047831	3300031681	Soil	PTPHQERAKRMNEMGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVVMLKKDLFQTVLQREELNAAGRAQ
Ga0318496_100807731	3300031713	Soil	RMRYKGEERTTELPLSHGMIRQLAFEAALRNMRIGELIGELMAAMLEKDLFQTVLQREEP
Ga0307476_109262941	3300031715	Hardwood Forest Soil	HQEREKRMNEVGLANFAIRMRYKGEERATELPLTDDMIRQLAFEAELRDMRIGELIGELMVAMLKKDLFQAVLPREKQNNSIEIT
Ga0306917_103360501	3300031719	Soil	KRMNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELTGELIVAMLKKDLFQTVLQWEEPK
Ga0318501_107291461	3300031736	Soil	VKRINEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVAMLKKDLFQRVLQREEPNNGT
Ga0306918_100404601	3300031744	Soil	QAQTPTLHQERMKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVAMLKKDLFQRVLQREEPNNGT
Ga0306918_103362643	3300031744	Soil	KTMNEAGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAELRNMRIGELIGELMVVMLKKDLFQAVLQREKANNGTQTP
Ga0306918_112799161	3300031744	Soil	NEVGWANFAIRMQYKGEERTTELPLTQDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDNGIQTP
Ga0318494_100940753	3300031751	Soil	ASFAIRMRYKGEERTTELPLTQDMIRQLAFEAGLRNMRIGELIGELMAAMLEKDLFQTVLQREGPK
Ga0318554_102429111	3300031765	Soil	PTPHQERAKKMNEVGSASFAIRMRYKGEERTTELPLTHDMIMQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK
Ga0318526_102241753	3300031769	Soil	VGSASFAIRMRYKGEERTTELPLTHDMIMQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK
Ga0318546_106769172	3300031771	Soil	PVEQAQTLTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAVLRNMRIGELIGELLVAMLTKDLFQAVLQQEKPDNGVQTP
Ga0318546_107962522	3300031771	Soil	SGPAEQAQAPTPHQERMNEVGSANFAIRMRYKGEERTTELPLTHGMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGTYTP
Ga0318546_109400611	3300031771	Soil	QAPTPHQERGSANFAIRMQYKGEERTTELPLTQDMIRQLAFEAELHNMRIGELVGELMVAMLKKDLFQAVLEHEKPDNGIQTP
Ga0318566_104616542	3300031779	Soil	PVEQAQTPTPHQERAKKMNEVGSASFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGGLIGELMAAILKKDLFQTVLQREEPK
Ga0318547_103179892	3300031781	Soil	NEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT
Ga0318547_108461822	3300031781	Soil	QTPTPHQERVKRMNEGGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAVLRNMRIGELIGELLVAMLTKDLFQAVLQQEKPDNGVQTP
Ga0318548_101018561	3300031793	Soil	GSASLAVRMRYKGEEQTTELPLTHDMIGQLALEAELRGNTRIGELIGELMVAILKKDLFQTVLQREEPK
Ga0318497_108809252	3300031805	Soil	PVEQAQTPTPHQERAKKMNEVGSASFAIRMRYKGEERTTELPLTHDMITQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK
Ga0318567_106940141	3300031821	Soil	VGSASLAVRMRYKGEEQTTELPLTHDMIGQLALEAELRGNTRIGELIGELMVAILKKDLFQTVLQREEPK
Ga0318499_100347011	3300031832	Soil	SAPVEQAQTPTPHQERAKKMNEVGSASFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVAMLKKDLFQTVLQREEPK
Ga0318499_102396802	3300031832	Soil	VVQAQAPTPHQEQAKRANEAGAAHFAIRMQYKGDERTTELPLTPDMIRQLAFEAELRDMRIGELIGQLMVAMLKKDLFQAVLEQKKPANGIQMP
Ga0310917_107451601	3300031833	Soil	QAPTPHQERMNEVGSANFAIRMRYKGEERTTELPLSHGMIRQLAFEAALRNMRIGELIGELMAAMLEKDLFQTVLQREGPK
Ga0318517_100583461	3300031835	Soil	ERAKKMNEVGSASLAIRMRYKGEERTTELPLTHDMIGQLAFEAALRNMRIGELVGELMVAMLEKDLFQTVLQRGGPK
Ga0318512_101515142	3300031846	Soil	FAIRMQYKGEERTTELPLTQDMIRQLAFEAELHNMRIGELVGELMVAMLKKDLFQAVLEHEKPDNGIQTP
Ga0306919_108698972	3300031879	Soil	ANFAIRMRYKGEERTTELPLTHDMIRQLAFEAVLRNMRIGELIGELLVAMLTKDLFQAVLQQEKPDNGVQTP
Ga0318544_100346603	3300031880	Soil	MNEVGSASFAIRMRYKGEERTTELPLTHDMITQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQPPSNFPSPC
Ga0306925_101710872	3300031890	Soil	MGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVVMLKKDLFQTVLQREELNAAGRAQ
Ga0318522_100249493	3300031894	Soil	APVEQAQTPTPHQERAKKMNEVGSASFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGGLIGELMAAILKKDLFQTVLQREEPK
Ga0318551_102178751	3300031896	Soil	QAPTPHQERMNEVGSANFAIRMRYKGEERTTELPLTHGMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQTVLQREELNAAGRAQ
Ga0318520_105719162	3300031897	Soil	ASFAIRMRYKGEERTTELPLTHDMIRQLAFEAVLRNMRIGELIGELLVAMLTKDLFQAVLQQEKPDNGVQTP
Ga0306923_103202251	3300031910	Soil	TPHQEWVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVAMLKKDLFQRVLQREEPNNGT
Ga0306923_104511231	3300031910	Soil	EQAKRANEAGAAHFALRMQYKGEERTTELPLTPDMIRQLAFEAELRNMRIAELIGELMVAMLKKDPFQAVLEQKKHKRRKAPSGHEDCLP
Ga0306923_105843412	3300031910	Soil	MGSANFAIRMQYKGEERTTDLPLTQDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDHGVQTP
Ga0306921_102810304	3300031912	Soil	QNSQSAPVEQAQTPTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT
Ga0310912_103306373	3300031941	Soil	HQERAKTMNEAGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAELRNMRIGELIGELMVVMLKKDLFQAVLQREKANNGTQTP
Ga0310912_110868082	3300031941	Soil	NELGSANFAIRMRYKGEERTTELPLSHGMIRQLAFEAALRNMRIGELIGELMAAMLEKDLFQTVLQREGPK
Ga0310913_100711245	3300031945	Soil	ALVEQAQTPTPHQERMNEVGSANFAIRMRYKGEERTTELPLTHGMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGTYTP
Ga0310913_105683461	3300031945	Soil	QNSQSAPVEQAQTPTPHQERVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVAMLKKDLFQRVLQREEPNNGT
Ga0318530_103625322	3300031959	Soil	PTPHQERAKKMNEVGSASLAVRMRYKGEEQTTELPLTHDMIGQLALEAELRGNTRIGELIGELMVAILKKDLFQTVLQREEPK
Ga0318531_101414612	3300031981	Soil	NSQSAAVEQAQTPTAHQERAKTMNEAGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAELRNMRIGELIGELMVVMLKKDLFQAVLQREKANNGTQTP
Ga0306922_104837251	3300032001	Soil	RVKRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVAMLKKDLFQRVLQREEPNNGT
Ga0318549_105772121	3300032041	Soil	AGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAELRNMRIGELIGELMVVMLKKDLFQAVLQREKANNGTQTP
Ga0318532_100875891	3300032051	Soil	NEVGSANFAIRMRYKGEERTTELPLTHGMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGTYTP
Ga0318514_105072911	3300032066	Soil	NEVGSANFAIRMRYKGEERTTELPLTHGMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT
Ga0306924_117038561	3300032076	Soil	YKGEERTTELPLTHDMIRQLAFEAVLRNMRIGELIGELLVAMLTKDLFQAVLQQEKPDNGVQTP
Ga0318540_104366432	3300032094	Soil	VRRMNEVGSANFAIRMRYKGEERTTELPLTHDMIRQLAFEAALRNMRIGELIGELMVVMLKKDLFQRVLQREEPNNGT
Ga0306920_1014241152	3300032261	Soil	QAQAPTPQQDRAKRANEVGWANFAIRMQYKGEERTTELPLTQDMIRQLAFEAELRNMRIGELIGELMVAMLKKDLFQAVLEQKKPDNGIQTP
Ga0318519_101841111	3300033290	Soil	KKMNEEGSASFAIRMRYKGEERTTELPLTHDMIMQLAFEAGLRNMRIGELIGELMVAMLKKDLFQTVLQREEPK
Ga0318519_102034131	3300033290	Soil	PTPHQERAKKMNEVGSANFAIRMRYKGEERTTELPLTHDMIGQLAFEAELRNMRIGELIGELMVVMLKKDLFQTVLQREELNAAGRAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094589

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences