NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F094384

Metagenome Family F094384

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094384
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 55 residues
Representative Sequence MELVLWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLREGQLEEGLDRNNK
Number of Associated Samples 50
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.54 %
% of genes near scaffold ends (potentially truncated) 15.09 %
% of genes from short scaffolds (< 2000 bps) 70.75 %
Associated GOLD sequencing projects 37
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.189 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(58.491 % of family members)
Environment Ontology (ENVO) Unclassified
(95.283 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.566 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.10%    β-sheet: 0.00%    Coil/Unstructured: 36.90%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00127Copper-bind 5.66
PF12893Lumazine_bd_2 5.66
PF13489Methyltransf_23 3.77
PF02548Pantoate_transf 3.77
PF12728HTH_17 2.83
PF01497Peripla_BP_2 2.83
PF00939Na_sulph_symp 2.83
PF00106adh_short 1.89
PF00501AMP-binding 1.89
PF05930Phage_AlpA 1.89
PF01053Cys_Met_Meta_PP 1.89
PF018125-FTHF_cyc-lig 1.89
PF13356Arm-DNA-bind_3 0.94
PF00155Aminotran_1_2 0.94
PF05721PhyH 0.94
PF02696SelO 0.94
PF00535Glycos_transf_2 0.94
PF01048PNP_UDP_1 0.94
PF01479S4 0.94
PF01625PMSR 0.94
PF00487FA_desaturase 0.94
PF01327Pep_deformylase 0.94
PF01370Epimerase 0.94
PF13537GATase_7 0.94
PF00494SQS_PSY 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0413Ketopantoate hydroxymethyltransferaseCoenzyme transport and metabolism [H] 3.77
COG4558ABC-type hemin transport system, periplasmic componentInorganic ion transport and metabolism [P] 2.83
COG4592ABC-type Fe2+-enterobactin transport system, periplasmic componentInorganic ion transport and metabolism [P] 2.83
COG4594ABC-type Fe3+-citrate transport system, periplasmic componentInorganic ion transport and metabolism [P] 2.83
COG4607ABC-type enterochelin transport system, periplasmic componentInorganic ion transport and metabolism [P] 2.83
COG0471Di- and tricarboxylate antiporterCarbohydrate transport and metabolism [G] 2.83
COG0614ABC-type Fe3+-hydroxamate transport system, periplasmic componentInorganic ion transport and metabolism [P] 2.83
COG1055Na+/H+ antiporter NhaD or related arsenite permeaseInorganic ion transport and metabolism [P] 2.83
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 1.89
COG3311DNA-binding transcriptional regulator AlpATranscription [K] 1.89
COG4100Cystathionine beta-lyase family protein involved in aluminum resistanceInorganic ion transport and metabolism [P] 1.89
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 1.89
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 1.89
COG02125-formyltetrahydrofolate cyclo-ligaseCoenzyme transport and metabolism [H] 1.89
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 1.89
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 1.89
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 1.89
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 1.89
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 1.89
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 1.89
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 1.89
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 0.94
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 0.94
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 0.94
COG0225Peptide methionine sulfoxide reductase MsrAPosttranslational modification, protein turnover, chaperones [O] 0.94
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 0.94
COG0397Protein adenylyltransferase (AMPylase) SelO/YdiU (selenoprotein O)Posttranslational modification, protein turnover, chaperones [O] 0.94
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 0.94
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 0.94
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 0.94
COG1562Phytoene/squalene synthetaseLipid transport and metabolism [I] 0.94

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.13 %
UnclassifiedrootN/A18.87 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006165|Ga0075443_10034357All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 5801694Open in IMG/M
3300006190|Ga0075446_10034218All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21811629Open in IMG/M
3300006190|Ga0075446_10040876All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1465Open in IMG/M
3300006190|Ga0075446_10233569Not Available509Open in IMG/M
3300006191|Ga0075447_10006345All Organisms → cellular organisms → Bacteria5090Open in IMG/M
3300006191|Ga0075447_10095603All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium EB0_41B091034Open in IMG/M
3300006191|Ga0075447_10106575All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300006191|Ga0075447_10141138All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300006193|Ga0075445_10114811All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium EB0_41B09991Open in IMG/M
3300006193|Ga0075445_10308181Not Available534Open in IMG/M
3300006352|Ga0075448_10002391All Organisms → cellular organisms → Bacteria6334Open in IMG/M
3300006947|Ga0075444_10152625All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300007229|Ga0075468_10229747All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300009172|Ga0114995_10007555All Organisms → cellular organisms → Bacteria → Proteobacteria6952Open in IMG/M
3300009172|Ga0114995_10010491All Organisms → cellular organisms → Bacteria5780Open in IMG/M
3300009172|Ga0114995_10022276All Organisms → cellular organisms → Bacteria3777Open in IMG/M
3300009172|Ga0114995_10047049All Organisms → cellular organisms → Bacteria2473Open in IMG/M
3300009172|Ga0114995_10047919All Organisms → cellular organisms → Bacteria2448Open in IMG/M
3300009172|Ga0114995_10094888All Organisms → cellular organisms → Bacteria1675Open in IMG/M
3300009172|Ga0114995_10141751All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21811343Open in IMG/M
3300009172|Ga0114995_10349639All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181812Open in IMG/M
3300009172|Ga0114995_10552016All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580630Open in IMG/M
3300009172|Ga0114995_10684622All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300009172|Ga0114995_10826049All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300009409|Ga0114993_11179299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria540Open in IMG/M
3300009420|Ga0114994_10062553All Organisms → cellular organisms → Bacteria2553Open in IMG/M
3300009420|Ga0114994_10134240All Organisms → cellular organisms → Bacteria → Proteobacteria1679Open in IMG/M
3300009420|Ga0114994_10166266All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1492Open in IMG/M
3300009420|Ga0114994_10565235All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300009420|Ga0114994_10763922Not Available629Open in IMG/M
3300009420|Ga0114994_11119948Not Available508Open in IMG/M
3300009422|Ga0114998_10022763All Organisms → cellular organisms → Bacteria → Proteobacteria3657Open in IMG/M
3300009422|Ga0114998_10068608Not Available1804Open in IMG/M
3300009422|Ga0114998_10099381All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 5801436Open in IMG/M
3300009422|Ga0114998_10257204All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300009422|Ga0114998_10528468All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300009425|Ga0114997_10098083All Organisms → cellular organisms → Bacteria1793Open in IMG/M
3300009526|Ga0115004_10046068All Organisms → cellular organisms → Bacteria2815Open in IMG/M
3300009526|Ga0115004_10447979All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181764Open in IMG/M
3300009526|Ga0115004_10882534All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales534Open in IMG/M
3300009705|Ga0115000_10408573All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300009705|Ga0115000_10560179All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium EB0_41B09714Open in IMG/M
3300009705|Ga0115000_10829196Not Available567Open in IMG/M
3300009706|Ga0115002_10457050All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC2181935Open in IMG/M
3300009785|Ga0115001_10339051All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300009785|Ga0115001_10456570All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 580793Open in IMG/M
3300009785|Ga0115001_10650507All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300010883|Ga0133547_10726421All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 5801963Open in IMG/M
3300010883|Ga0133547_11871109All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300012953|Ga0163179_10313721All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 5801244Open in IMG/M
3300020309|Ga0211681_1082980Not Available519Open in IMG/M
3300020372|Ga0211683_10025373All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 5802011Open in IMG/M
3300020372|Ga0211683_10090025All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium EB0_41B09996Open in IMG/M
3300020372|Ga0211683_10123151All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300020376|Ga0211682_10013119All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Nitrosomonadales bacterium3405Open in IMG/M
3300020376|Ga0211682_10066218All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1458Open in IMG/M
3300020376|Ga0211682_10324872Not Available574Open in IMG/M
3300020382|Ga0211686_10194091Not Available837Open in IMG/M
3300020382|Ga0211686_10424331Not Available535Open in IMG/M
3300020396|Ga0211687_10258004Not Available694Open in IMG/M
3300020452|Ga0211545_10242952Not Available828Open in IMG/M
3300020462|Ga0211546_10054379All Organisms → cellular organisms → Bacteria → Proteobacteria1956Open in IMG/M
3300020472|Ga0211579_10475106Not Available706Open in IMG/M
3300020472|Ga0211579_10511911All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria676Open in IMG/M
3300020475|Ga0211541_10074237All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 5801689Open in IMG/M
3300027522|Ga0209384_1031132All Organisms → cellular organisms → Bacteria1576Open in IMG/M
3300027668|Ga0209482_1003962All Organisms → cellular organisms → Bacteria8361Open in IMG/M
3300027668|Ga0209482_1013900All Organisms → cellular organisms → Bacteria → Proteobacteria3716Open in IMG/M
3300027668|Ga0209482_1081549All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300027672|Ga0209383_1009028All Organisms → cellular organisms → Bacteria4844Open in IMG/M
3300027686|Ga0209071_1126219Not Available738Open in IMG/M
3300027687|Ga0209710_1000151All Organisms → cellular organisms → Bacteria → Proteobacteria76918Open in IMG/M
3300027687|Ga0209710_1001910All Organisms → cellular organisms → Bacteria15130Open in IMG/M
3300027687|Ga0209710_1002699All Organisms → cellular organisms → Bacteria12296Open in IMG/M
3300027687|Ga0209710_1003711All Organisms → cellular organisms → Bacteria → Proteobacteria10201Open in IMG/M
3300027687|Ga0209710_1006550All Organisms → cellular organisms → Bacteria → Proteobacteria7100Open in IMG/M
3300027687|Ga0209710_1012425All Organisms → cellular organisms → Bacteria4772Open in IMG/M
3300027687|Ga0209710_1013239All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales4592Open in IMG/M
3300027687|Ga0209710_1013712All Organisms → cellular organisms → Bacteria4489Open in IMG/M
3300027687|Ga0209710_1018604All Organisms → cellular organisms → Bacteria3692Open in IMG/M
3300027687|Ga0209710_1059442Not Available1681Open in IMG/M
3300027687|Ga0209710_1074423All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium 5801427Open in IMG/M
3300027752|Ga0209192_10010192All Organisms → cellular organisms → Bacteria5185Open in IMG/M
3300027779|Ga0209709_10041779All Organisms → cellular organisms → Bacteria2728Open in IMG/M
3300027779|Ga0209709_10125774All Organisms → Viruses → Predicted Viral1297Open in IMG/M
3300027779|Ga0209709_10128587All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300027779|Ga0209709_10207340All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300027780|Ga0209502_10095029All Organisms → cellular organisms → Bacteria1525Open in IMG/M
3300027780|Ga0209502_10455731Not Available511Open in IMG/M
3300027788|Ga0209711_10104784All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300027791|Ga0209830_10163689All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium EB0_41B091058Open in IMG/M
3300027801|Ga0209091_10394187All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300027813|Ga0209090_10058101All Organisms → cellular organisms → Bacteria2153Open in IMG/M
3300028194|Ga0257106_1048958All Organisms → cellular organisms → Bacteria1602Open in IMG/M
3300031510|Ga0308010_1314541All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300031588|Ga0302137_1090654All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1181Open in IMG/M
3300031594|Ga0302131_1231441All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300031599|Ga0308007_10052463All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1540Open in IMG/M
3300031626|Ga0302121_10021191Not Available2205Open in IMG/M
3300031630|Ga0308004_10339427Not Available570Open in IMG/M
3300031644|Ga0308001_10200437All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300031695|Ga0308016_10070684All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → OM43 clade → Methylophilales bacterium HTCC21811451Open in IMG/M
3300031695|Ga0308016_10226920All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium EB0_41B09709Open in IMG/M
3300031702|Ga0307998_1027231All Organisms → cellular organisms → Bacteria → environmental samples → uncultured marine bacterium EB0_41B092396Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine58.49%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine32.08%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.60%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.94%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.94%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300020309Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX556064-ERR599104)EnvironmentalOpen in IMG/M
3300020311Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX556071-ERR599171)EnvironmentalOpen in IMG/M
3300020372Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)EnvironmentalOpen in IMG/M
3300020376Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX555997-ERR599121)EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300020396Marine microbial communities from Tara Oceans - TARA_B100000767 (ERX555915-ERR599122)EnvironmentalOpen in IMG/M
3300020452Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)EnvironmentalOpen in IMG/M
3300020462Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)EnvironmentalOpen in IMG/M
3300020472Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)EnvironmentalOpen in IMG/M
3300020475Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)EnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027686Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027780Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027801Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300028194Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10mEnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031588Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCMEnvironmentalOpen in IMG/M
3300031594Marine microbial communities from Western Arctic Ocean, Canada - CB9_20mEnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031644Marine microbial communities from water near the shore, Antarctic Ocean - #5EnvironmentalOpen in IMG/M
3300031695Marine microbial communities from water near the shore, Antarctic Ocean - #233EnvironmentalOpen in IMG/M
3300031702Marine microbial communities from David Island wharf, Antarctic Ocean - #37EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0075443_1003435743300006165MarineMDLVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNSKEK*
Ga0075446_1003421833300006190MarineMELVLWFVLIAIGIVFMFSIVIKAVKFIKTDKIHDTVKEKKLRERQLEEDLDRSHKED*
Ga0075446_1004087613300006190MarineILIAIGIVFMFSIVIKAVKFIKTDKIHATVREKKLRERQLEEGLDRNNK*
Ga0075446_1023356913300006190MarineLVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNSKEK*
Ga0075447_1000634583300006191MarineLWLILIAIGIVFMFSIVIKAVKFIKTDKIHNTSREKKLRERQLEEELDRSNK*
Ga0075447_1009560323300006191MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHATVREKKLRERQLEEGLDRNNK*
Ga0075447_1010657523300006191MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRNSKEN*
Ga0075447_1014113813300006191MarineMELVLWLILIAIGIVFMFSIVINAVKFIKTDKIHDTAREKKLREGQLEEGLDRVGK*
Ga0075445_1011481123300006193MarineMELIFWFMLIAIGIVFMFSIVIKAVKFIKTDKIHDTAREKKLRERQLEEEPGRKNK*
Ga0075445_1030818123300006193MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSREKKLRERQLEEELDKNSKEK*
Ga0075448_1000239123300006352MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNSKEK*
Ga0075444_1015262513300006947MarineMELVLWLILIAIGIFGMFAYVTKAVKFIMTDKIHNTAREKKLREGQLEEGLDRDNKDN*
Ga0075468_1022974723300007229AqueousMELVLWLIVIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLRERQLEEELDK*
Ga0114995_10007555113300009172MarineMELVLSLILIAIGIFGMFTYVAKVVKFIKTDKIHDTAREKKLREGQLEE*
Ga0114995_1001049183300009172MarineMIMELVLWLIVIAVGIFFMFSYVIKTVKFIKTDKIHDTTKERKLREKQLEEDL*
Ga0114995_1002227653300009172MarineMELVLWLILIAIAIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRNNKEN*
Ga0114995_1004704953300009172MarineMIMELVLWLILIAIGIVFMFSIVIKAVKFIKTDEIHDTSREKKLRERQLKEELDQK*
Ga0114995_1004791943300009172MarineMELILWLILIAIGIFGMFTYVTKAVKYIKTDKIHDTTREKKLREGQLDEELDINNKDN*
Ga0114995_1009488843300009172MarineMELVLWLILIAIGIVFMFSIVINAVKFIKTDKIHDTAREKKLRERQLEEELDKNNN*
Ga0114995_1014175133300009172MarineMELIFWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLRDGQLEEELDNPSK*
Ga0114995_1034963923300009172MarineMEFFLWLILIAIGIFGMFTYVIKVVKFIKTDKIHDTAREKKLREGQLEEELDK*
Ga0114995_1055201623300009172MarineMELIFWFMLIAIGIVFMFSIVIKAVKFIKTDKIHDTAREKKLRERQLEEEPGRNNK*
Ga0114995_1068462213300009172MarineMIMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSREKKLRERQLKEELDKK*
Ga0114995_1082604923300009172MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQL
Ga0114993_1117929923300009409MarineMELFLWLILIAIGIFGMFIYVTKVVKFIKTDKIHDTSKEKKLREGQL
Ga0114994_1006255333300009420MarineMIMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNSKEK
Ga0114994_1013424033300009420MarineMELVLWLILIAIGIFVMFAYVTKAVKFIKTNKIHDTASEKKLREGQLEERLDRNNK*
Ga0114994_1016626623300009420MarineMELFLWLILIAIGIFGMFIYVTKVVKFIKTDKIHDTSKEKKLREGQLEEELDKY*
Ga0114994_1056523523300009420MarineMELVLWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLREGQLEEGLDRNNK*
Ga0114994_1076392213300009420MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTNKIHDTAREKKLRERQLEEELDKNNN*
Ga0114994_1111994813300009420MarineMELVLWLIVIAVGIFFMFSYVIKTVKFIKTDKIHDTTKERKLREKQLEEDL*
Ga0114998_1002276363300009422MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRDNK*
Ga0114998_1006860833300009422MarineMIMELVLWLILIAIGILFMFSYVIKAVKFIKTDKIHDTARERKLRERQLQEELERFNKEK
Ga0114998_1009938133300009422MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDEIHDTSREKKLRERQLKEELDQK*
Ga0114998_1025720423300009422MarineMELVLWLILIAIGIFGMFTYVIKAVKFIKTDKIHDSAREKKLREGQLEEGLDRNNK*
Ga0114998_1052846823300009422MarineMELVLWLILIAIAIFGMFTYVTKAVKFIKTDKIHDTAREKELREG
Ga0114997_1009808323300009425MarineMELVLWLILIAIGIFGMFTYVTKVVKFIKTDKIHDTAREKKLREGQLEEELDRNNK*
Ga0115004_1002921813300009526MarineIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRDNK*
Ga0115004_1004606833300009526MarineMELIFWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLRDEQLEEELDNPSK*
Ga0115004_1044797923300009526MarineMELVLWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLREGQLEEELDNPSK*
Ga0115004_1088253423300009526MarineMELVLWLILIVIGIFGMFTYVTKVVKFIKTDKIHDTAREKKLREGQLKEELDRY*
Ga0115000_1040857323300009705MarineMELILWLILIAIGIFGMFTYVTKAVKYIKTDKIHDTTREKKLREGQLDEDLDISNKDN*
Ga0115000_1056017923300009705MarineMIMELIFWFMLIAIGIVFMFSIVIKAVKFIKTDKIHDTAREKKLRERQLEEEPGRNNK*
Ga0115000_1082919623300009705MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHNTVREKKLREKQLEEGLDKNNK*
Ga0115002_1045705023300009706MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTNKIHDTAREKKLREGQLEEELDKY*
Ga0115001_1033905123300009785MarineMELVLWLILIAIGIFGMFTYVIKAVKFIKTDKIHDTVREKKLREGQLEEELDKNNK*
Ga0115001_1045657033300009785MarineLWLILIAIGIFGMFTYVTKAVKYIKTDKIHDTTREKKLREGQLDEELDINNKDN*
Ga0115001_1065050713300009785MarineLELVLWLIIIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLREGQLEEGLDRNNK*
Ga0133547_1072642153300010883MarineIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLREGQLEEGLDRNNK*
Ga0133547_1187110923300010883MarineMELVLWLILIGIGIVFMFLIVIKAVKFIKTDKIHDTASERKLRERQLKEELDRNNE*
Ga0163179_1031372113300012953SeawaterMELVLWLILIAVGIFGMFTYVIKAVKFIKTDKIHDTSREKKLRKGQLEEEQDINNKEK*
Ga0211681_108298023300020309MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHATVREKKLRERQLEEDLDRSHKED
Ga0211628_101423013300020311MarineAVGIFVMFTYVTKAVKFIKTDKIHDTAREKKLRKGQLEEEQDINNKEK
Ga0211683_1002537343300020372MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNSKEK
Ga0211683_1009002513300020372MarineMELVLWLILIAIGIVFMFSIVINAVKFIKTDKIHDTAREKKLREGQLEEGLDRVGK
Ga0211683_1012315123300020372MarineMELVLWLILIAIGIFGMFAYVTKAVKFIMTDKIHNTAREKKLREGQLEEGLDRDNKDN
Ga0211682_1001311913300020376MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHATVREKKLRERQLEEGLDRNNK
Ga0211682_1006621823300020376MarineMELVLWFVLIAIGIVFMFSIVIKAVKFIKTDKIHDTVKEKKLRERQLEEDLDRSHKED
Ga0211682_1032487223300020376MarineMIMELVFWLILIAFGILFMFLNVIKAVKFIKTDKVHDTSRERKLRERQLKEELESFNKEK
Ga0211686_1019409113300020382MarineMELVFWLILIAFGILFMFLNVIKAVKFIKTDKVHDTSRERKLRERQLKEELESFNKEK
Ga0211686_1042433113300020382MarineMELVLWLILIAIGILFMFSYVIKAVKFIKTDKIHDTAREKKLRARQLQEEHDKYNKEK
Ga0211687_1025800413300020396MarineLIVGAIIIAIFIIVMFSYVIKEVKFIKTDNIHDTVKEKKLRERQLEEELDRDNKEG
Ga0211545_1024295213300020452MarineMELVLWLILIAVGIFGMFTYVIKAVKFIKTDKIHDTSREKKLRKGQLEEEQDINN
Ga0211546_1005437913300020462MarineMELVLWLILIAVGIFVMFTYVTKAVKFIKTDKIHDTAREKKLRKGQLEEEQDINNREK
Ga0211579_1047510623300020472MarineMELVLWLILITVGIFGMFTYVIKAVKFIKTDKIHDTSREKKLRKGQLEEEQDINNKEK
Ga0211579_1051191123300020472MarineMELVLWLILIAIGIFGMFVYVIKAVKFIKTDKIHDTAREKKLRKGQLEEEQDINNKE
Ga0211541_1007423723300020475MarineMELVLWLILIAVGIFGMFTYVIKAVKFIKTDKIHDTSREKKLRKGQLEEEQDINNKEK
Ga0209384_103113233300027522MarineMELVFWLIFIAIGIVFMFSIVIKAVKFIKTDKIHDTARERKLRERQLEEGVDRNHK
Ga0209482_100396253300027668MarineMDLVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNSKEK
Ga0209482_101390043300027668MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHATVREKKLRERQLE
Ga0209482_108154923300027668MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRNSKEN
Ga0209383_100902893300027672MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSREKKLRERQLEEELDKNSKEK
Ga0209071_112621923300027686MarineDLVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNSKEK
Ga0209710_1000151833300027687MarineMELVLWLIVIAVGIFFMFSYVIKTVKFIKTDKIHDTTKERKLREKQLEEDL
Ga0209710_1001910193300027687MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDEIHDTSREKKLRERQLKEELDQK
Ga0209710_1002699143300027687MarineMELILWLILIAIGIVFMFSIVVKAVKFIKTDKIHDTARERRLRERQLEEELDINNK
Ga0209710_1003711133300027687MarineMELILWLILIAIGIFGMFTYVTKAVKYIKTDKIHDTTREKKLREGQLDEELDINNKDN
Ga0209710_100655013300027687MarineMELVLSLILIAIGIFGMFTYVAKVVKFIKTDKIHDTAREKKLREGQLEE
Ga0209710_101242523300027687MarineMELVLWLILIAIAIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRNNKEN
Ga0209710_101323953300027687MarineMELIFWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLRDGQLEEELDNPSK
Ga0209710_101371213300027687MarineMEFFLWLILIAIGIFGMFTYVIKVVKFIKTDKIHDTAREKKLREGQLEEELDK
Ga0209710_101860423300027687MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRDNK
Ga0209710_105944213300027687MarineMELVLWLILIAIGILFMFSYVIKAVKFIKTDKIHDTARERKLRERQLQEELERFNKEK
Ga0209710_107442333300027687MarineMELVLWLILIAIGIVFMFSIVINAVKFIKTDKIHDTAREKKLRERQLEEELDKNNN
Ga0209192_1001019233300027752MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRDNR
Ga0209709_1004177913300027779MarineMELVLWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRNNKEN
Ga0209709_1012577413300027779MarineMELFLWLILIAIGIFGMFIYVTKVVKFIKTDKIHDTSKEKKLREGQLEEELDKY
Ga0209709_1012858723300027779MarineMELVLWLILIAIGIFGMFTYVTKVVKFIKTDKIHDTAREKKLREGQLEEELDRNNK
Ga0209709_1020734013300027779MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTNKIHDTAREKKLRERQLEEELDKNNN
Ga0209502_1009502923300027780MarineMELVLWLILIAIGIFGMFTYVIKAVKFIKTDKIHDSAREKKLREGQLEEGLDRNNK
Ga0209502_1045573113300027780MarineMELVLWLILIGIGIVFMFLIVIKAVKFIKTDKIHDTASERKLRERQLKEELDRNNE
Ga0209711_1010478443300027788MarineMELVLWLILIAIGIVFMFSIVINAVKFIKTDKIHDTAIEKKLRERQLEEELDKNNN
Ga0209830_1016368923300027791MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHATVREKKLRERQLDEELD
Ga0209091_1039418713300027801MarineMELVLWLILIAIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLREGQLEEELDNPSK
Ga0209090_1005810143300027813MarineMIMELVLWLILIAIGIVFMFSIVIKAVKFIKTDEIHDTSREKKLRERQLKEELDQK
Ga0257106_104895823300028194MarineMELVLWLILIAIGIFGMFTYVTKVVKFIKTDKIHDTAREKKLREKQLEEDKK
Ga0308010_131454123300031510MarineMELVLWLILIAIGIVFMFSIVIKAVKFIKTDKIHDTSRERKLRERQLEEELDKNS
Ga0302137_109065413300031588MarineMELVLWLILIVIGIFGMFTYVIKAVKFIKTNKIHDTAREKKLRERQLEEELDKNNN
Ga0302131_123144123300031594MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKKLRERQLEEELDKNNN
Ga0308007_1005246313300031599MarineMELVFWLILIAFGILFMFLNVIKAVKFIKTDKVHDTSRERKLRERQLKEELESFN
Ga0302121_1002119123300031626MarineMELVLWLILIVIGIFGMFTYVTKAVKFIKTDKIHDTAREKELREGQLEEGLDRNNKEN
Ga0308004_1033942713300031630MarineLWLILIAIGIVFMFSIVIKAVKFIKTDKIHATVREKKLRERQLEEGLDRNNK
Ga0308001_1020043713300031644MarineMELVLWLILIAIGILFMFSYVIKAVKFIKTDKIHDTAREKKLRARQLQEEHDKYN
Ga0308016_1007068423300031695MarineMELVLWLILIAIGIFGMFTYVTKAVKFIKTDKTHDTIREKKLRERQLDQELDRNNNHKKK
Ga0308016_1022692013300031695MarineMELVLWLILIAIGILFMFSYVIKAVKFIKTDKIHNTSREKKLRERQLEEELDRSNK
Ga0307998_102723113300031702MarineMELVLWLILIAVGIFFMFSYVIKTVKFIKTDKIHDTTRERKLREKQLEEDL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.