Metagenome / Metatranscriptome Family F094365

Basic Information
Family ID	F094365
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	98 residues
Representative Sequence	MVHITTVVIFIVSLFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIVDNPIHGGD
Number of Associated Samples	83
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.60 %
% of genes near scaffold ends (potentially truncated)	18.87 %
% of genes from short scaffolds (< 2000 bps)	79.25 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (66.038 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.755 % of family members)
Environment Ontology (ENVO)	Unclassified (25.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.396 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.45% β-sheet: 11.88% Coil/Unstructured: 32.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00106	adh_short	12.26
PF00072	Response_reg	3.77
PF14947	HTH_45	3.77
PF00561	Abhydrolase_1	3.77
PF02635	DrsE	2.83
PF14791	DNA_pol_B_thumb	2.83
PF13302	Acetyltransf_3	1.89
PF02223	Thymidylate_kin	0.94
PF07690	MFS_1	0.94
PF00149	Metallophos	0.94
PF01361	Tautomerase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.94
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
All Organisms	root	All Organisms	33.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
cellular organisms	root	All Organisms → cellular organisms	33.02 %
Viruses	superkingdom	All Organisms → Viruses	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	33.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	14.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	14.15 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	8.49 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	3.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	8.49 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	3.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	8.49 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	3.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	6.60 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	3.77 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.04 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	6.60 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	3.77 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	0.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003996\|Ga0055467_10143011	Not Available	711	Open in IMG/M
3300004463\|Ga0063356_102174581	Not Available	844	Open in IMG/M
3300005366\|Ga0070659_101283639	Not Available	649	Open in IMG/M
3300005459\|Ga0068867_101679681	Not Available	595	Open in IMG/M
3300005718\|Ga0068866_10584592	Not Available	751	Open in IMG/M
3300006169\|Ga0082029_1383770	All Organisms → cellular organisms → Archaea	2207	Open in IMG/M
3300006844\|Ga0075428_100098425	All Organisms → cellular organisms → Archaea	3189	Open in IMG/M
3300006845\|Ga0075421_101234521	Not Available	831	Open in IMG/M
3300006846\|Ga0075430_100082927	Not Available	2686	Open in IMG/M
3300006847\|Ga0075431_100783372	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	927	Open in IMG/M
3300006847\|Ga0075431_101908858	Not Available	549	Open in IMG/M
3300006853\|Ga0075420_100793340	Not Available	816	Open in IMG/M
3300006876\|Ga0079217_10047439	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1706	Open in IMG/M
3300006876\|Ga0079217_10617770	Not Available	708	Open in IMG/M
3300006876\|Ga0079217_10790771	Not Available	656	Open in IMG/M
3300006876\|Ga0079217_10946507	Not Available	621	Open in IMG/M
3300006894\|Ga0079215_10267188	All Organisms → cellular organisms → Archaea	919	Open in IMG/M
3300006894\|Ga0079215_11225452	Not Available	573	Open in IMG/M
3300006918\|Ga0079216_10712880	Not Available	718	Open in IMG/M
3300006918\|Ga0079216_10746557	Not Available	707	Open in IMG/M
3300007004\|Ga0079218_10035882	All Organisms → cellular organisms → Archaea	2933	Open in IMG/M
3300009081\|Ga0105098_10071859	Not Available	1447	Open in IMG/M
3300009081\|Ga0105098_10086280	All Organisms → cellular organisms → Archaea	1337	Open in IMG/M
3300009094\|Ga0111539_10071595	All Organisms → cellular organisms → Archaea	4090	Open in IMG/M
3300009100\|Ga0075418_10020627	All Organisms → cellular organisms → Archaea	7264	Open in IMG/M
3300009100\|Ga0075418_10078901	All Organisms → cellular organisms → Archaea	3503	Open in IMG/M
3300009147\|Ga0114129_10181629	Not Available	2862	Open in IMG/M
3300009147\|Ga0114129_10270485	Not Available	2273	Open in IMG/M
3300009147\|Ga0114129_10387712	All Organisms → cellular organisms → Archaea	1844	Open in IMG/M
3300009156\|Ga0111538_10168517	Not Available	2781	Open in IMG/M
3300009156\|Ga0111538_12897310	Not Available	600	Open in IMG/M
3300009168\|Ga0105104_10002826	All Organisms → cellular organisms → Archaea	12525	Open in IMG/M
3300009168\|Ga0105104_10212829	Not Available	1051	Open in IMG/M
3300009553\|Ga0105249_10488846	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1274	Open in IMG/M
3300009610\|Ga0105340_1150562	Not Available	959	Open in IMG/M
3300009789\|Ga0126307_10232859	Not Available	1480	Open in IMG/M
3300009789\|Ga0126307_10474455	Not Available	1010	Open in IMG/M
3300010037\|Ga0126304_10011949	All Organisms → cellular organisms → Archaea	4762	Open in IMG/M
3300010038\|Ga0126315_10004245	All Organisms → cellular organisms → Archaea	6250	Open in IMG/M
3300010039\|Ga0126309_10115154	Not Available	1404	Open in IMG/M
3300010166\|Ga0126306_10178387	Not Available	1593	Open in IMG/M
3300011333\|Ga0127502_10860359	Not Available	1257	Open in IMG/M
3300012897\|Ga0157285_10003631	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2730	Open in IMG/M
3300012902\|Ga0157291_10248347	Not Available	590	Open in IMG/M
3300012915\|Ga0157302_10281741	Not Available	637	Open in IMG/M
3300012943\|Ga0164241_10474760	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	899	Open in IMG/M
3300013096\|Ga0157307_1043275	Not Available	821	Open in IMG/M
3300014301\|Ga0075323_1135543	Not Available	555	Open in IMG/M
3300014326\|Ga0157380_12714257	Not Available	562	Open in IMG/M
3300015077\|Ga0173483_10049267	Not Available	1605	Open in IMG/M
3300015371\|Ga0132258_11728982	Not Available	1577	Open in IMG/M
3300015371\|Ga0132258_12189389	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1388	Open in IMG/M
3300015371\|Ga0132258_12967514	Not Available	1177	Open in IMG/M
3300015373\|Ga0132257_100854734	Not Available	1138	Open in IMG/M
3300018067\|Ga0184611_1133837	Not Available	874	Open in IMG/M
3300018073\|Ga0184624_10010928	Not Available	3157	Open in IMG/M
3300018073\|Ga0184624_10328552	Not Available	685	Open in IMG/M
3300018073\|Ga0184624_10518827	Not Available	516	Open in IMG/M
3300018432\|Ga0190275_10016401	Not Available	5629	Open in IMG/M
3300018432\|Ga0190275_10571429	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1174	Open in IMG/M
3300018465\|Ga0190269_10042505	Not Available	2083	Open in IMG/M
3300018466\|Ga0190268_10510559	Not Available	820	Open in IMG/M
3300018469\|Ga0190270_10159446	Not Available	1847	Open in IMG/M
3300018469\|Ga0190270_10527037	Not Available	1133	Open in IMG/M
3300018469\|Ga0190270_11689823	Not Available	686	Open in IMG/M
3300018476\|Ga0190274_10240812	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	1631	Open in IMG/M
3300018481\|Ga0190271_10043655	All Organisms → cellular organisms → Archaea	3754	Open in IMG/M
3300018481\|Ga0190271_10673005	All Organisms → Viruses → Predicted Viral	1157	Open in IMG/M
3300018920\|Ga0190273_10281415	All Organisms → cellular organisms → Archaea	1099	Open in IMG/M
3300018920\|Ga0190273_10918361	Not Available	711	Open in IMG/M
3300019356\|Ga0173481_10001860	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	5239	Open in IMG/M
3300019767\|Ga0190267_11606522	Not Available	508	Open in IMG/M
3300019884\|Ga0193741_1084575	Not Available	815	Open in IMG/M
3300021184\|Ga0196959_10053193	Not Available	846	Open in IMG/M
3300024430\|Ga0196962_10015559	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	2277	Open in IMG/M
3300025537\|Ga0210061_1000160	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	9016	Open in IMG/M
3300025791\|Ga0210115_1013518	Not Available	1902	Open in IMG/M
3300025792\|Ga0210143_1002731	All Organisms → cellular organisms → Archaea	3806	Open in IMG/M
3300025904\|Ga0207647_10557885	Not Available	635	Open in IMG/M
3300027075\|Ga0214467_1008486	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1036	Open in IMG/M
3300027075\|Ga0214467_1033613	Not Available	584	Open in IMG/M
3300027378\|Ga0209981_1051065	Not Available	626	Open in IMG/M
3300027395\|Ga0209996_1008404	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1352	Open in IMG/M
3300027424\|Ga0209984_1057189	Not Available	575	Open in IMG/M
3300027543\|Ga0209999_1075750	Not Available	647	Open in IMG/M
3300027552\|Ga0209982_1071588	Not Available	568	Open in IMG/M
3300027647\|Ga0214468_1056523	All Organisms → cellular organisms → Archaea	1015	Open in IMG/M
3300027743\|Ga0209593_10062157	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1419	Open in IMG/M
3300027880\|Ga0209481_10110597	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1334	Open in IMG/M
3300027886\|Ga0209486_10125763	All Organisms → cellular organisms → Archaea	1388	Open in IMG/M
3300027909\|Ga0209382_10721574	Not Available	1070	Open in IMG/M
3300028380\|Ga0268265_11758625	Not Available	626	Open in IMG/M
3300030006\|Ga0299907_10211360	All Organisms → cellular organisms → Archaea	1600	Open in IMG/M
3300031229\|Ga0299913_11261824	Not Available	697	Open in IMG/M
3300031548\|Ga0307408_100951866	Not Available	789	Open in IMG/M
3300031562\|Ga0310886_10786722	Not Available	598	Open in IMG/M
3300031852\|Ga0307410_10772808	Not Available	815	Open in IMG/M
3300031903\|Ga0307407_10362475	All Organisms → cellular organisms → Archaea	1030	Open in IMG/M
3300031908\|Ga0310900_10826097	Not Available	751	Open in IMG/M
3300031944\|Ga0310884_10798497	Not Available	577	Open in IMG/M
3300031995\|Ga0307409_101925023	Not Available	621	Open in IMG/M
3300032002\|Ga0307416_103317415	Not Available	539	Open in IMG/M
3300032004\|Ga0307414_10761344	All Organisms → cellular organisms → Archaea	881	Open in IMG/M
3300034148\|Ga0364927_0113688	Not Available	760	Open in IMG/M
3300034151\|Ga0364935_0239070	Not Available	591	Open in IMG/M
3300034354\|Ga0364943_0358972	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.21%
Host-Associated	Host-Associated	36.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.06%
Plants	Host-Associated → Plants	36.79%
Aquatic	Environmental → Aquatic	14.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.21%
Freshwater	Environmental → Aquatic → Freshwater	5.66%
Sediment	Environmental → Aquatic → Sediment	4.72%
Marine	Environmental → Aquatic → Marine	3.77%
Floodplain	Environmental → Terrestrial → Floodplain	2.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.83%
Sand	Environmental → Terrestrial → Soil → Sand	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.83%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.83%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	9.43%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	5.66%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.66%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.83%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.83%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.94%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.94%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014301	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300027075	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0 HiSeq	Environmental	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055467_101430111	3300003996	Natural And Restored Wetlands	IPKSYVFATIITDSEESDFYMKLSDVLDDTKNNLGDVVQAINSGQKDHALNIISNITTNINEIENGLDLLVNNPIDGGD*
Ga0063356_1021745811	3300004463	Arabidopsis Thaliana Rhizosphere	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYTKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITMNIKELRNGLNLIVDNPIH
Ga0070659_1012836391	3300005366	Corn Rhizosphere	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYSKLYNILDNTEKDLGNIVQAINSEQKENALNILSNITTNIKEIRNGLNLIVDNPIHGGD*
Ga0068867_1016796811	3300005459	Miscanthus Rhizosphere	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIVDNPIYGGD*
Ga0068866_105845921	3300005718	Miscanthus Rhizosphere	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIIDNPIYGGD*
Ga0082029_13837702	3300006169	Termite Nest	MINTTTLVICIISVFVLVGGNFIPKADVYAQVITDSEEESDVYIQLSNILENIEKSLEDLVQAINSGEKDNALDIISNITMNVKEIENGLNLIVDNPIHGGD*
Ga0075428_1000984255	3300006844	Populus Rhizosphere	MIYIRTMVICIVSIFILTGNFIPKSDVFAQVISNSLEESDVYIQLSNILDNTEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNLIVDNPIHGGD*
Ga0075421_1012345211	3300006845	Populus Rhizosphere	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0075430_1000829274	3300006846	Populus Rhizosphere	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNIEQNLSNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0075431_1007833722	3300006847	Populus Rhizosphere	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLSNITQAINSGQNDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0075431_1019088581	3300006847	Populus Rhizosphere	MIYIRTMVICIVSIFILTGNFIPKSDVFAQVISNSLEESDVYIQLSNILDNTEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNLIVDNPI
Ga0075420_1007933401	3300006853	Populus Rhizosphere	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNIEQNLSNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIYGGD*
Ga0079217_100474391	3300006876	Agricultural Soil	LFVVVGVNFMYISDVFAQVISKYLEEGDIYMQLSNILDNTKKDLDDVVKSINSGKNDTALNIISNITMNINEIENGLDLLVDNPIHGGD*
Ga0079217_106177702	3300006876	Agricultural Soil	MVICIVSLFILTGIFIPKSYVFAQVISDDLEESNVYIQLSNILDNTEKVLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD*
Ga0079217_107907711	3300006876	Agricultural Soil	MIFIRTMVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVQAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD*
Ga0079217_109465071	3300006876	Agricultural Soil	MININTLVICIVSVFILLGVNFILKSDVFAQVISNSEEESDVYMQLSSILDNTKKDLDDVVQAINSGEKDNALNIISNITMNIKEIENGLNLIVDNPIHGGD*
Ga0079215_102671882	3300006894	Agricultural Soil	MIYIRTMVICIVSIFMLTGNFIPKSNVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVQAINSGEKDNALNIISNITMNIKEIRNGLNL
Ga0079215_112254521	3300006894	Agricultural Soil	LVICIVSVFILLGVNFILKSDVFAQVISNSEEESDVYMQLSSILDNTKKDLDDVLQAINSGEKDNALNIISNITMNIKEIENGLNLIVDNPIHGGD*
Ga0079216_107128801	3300006918	Agricultural Soil	MININTLVICIVSVFILLGVNFILKSDVFAQVISNSEEESDVYMQLSNILDNTKKDLEDVVQAINSGEKDNALNIISNITMNIKEIENGINLIVDNPIHGGD*
Ga0079216_107465572	3300006918	Agricultural Soil	MIYIRTMVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD*
Ga0079218_100358823	3300007004	Agricultural Soil	MIYMIYIKTLVICIVSVFFLTGNFIPKSDVFAQVISNNLEESDIYIQLSNILDNTEKNLGNVIDAINSGEKENALNIISNITMNIKEIRNGINLIVDNPIHGGD*
Ga0105098_100718592	3300009081	Freshwater Sediment	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGQNDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0105098_100862802	3300009081	Freshwater Sediment	MIYIKTLVICIVSVFFLTGNFIPKSDVFAQVISNNLEESDVYIQLSNILDNTEKNLGNVIDAINSGEKENALNIISNITMNIKEIRNGINLIVDNPIHGGD*
Ga0111539_100715956	3300009094	Populus Rhizosphere	MVICIVSIFILTGNFIPKSDVFAQVISNSLEESDVYIQLSNILDNTEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNLIVDNPIHGGD*
Ga0075418_100206274	3300009100	Populus Rhizosphere	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLSNVTQAINSGQNDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0075418_100789014	3300009100	Populus Rhizosphere	MVICIVSIFILTGNFIPKSDVFAQVISNSLEESDVYIQLSNILDNSEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNLIVDNPIHGGD*
Ga0114129_101816295	3300009147	Populus Rhizosphere	FIPKYDVFAQVISDDLEESNVYIQLSNILDNIEQNLSNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGDD*
Ga0114129_102704853	3300009147	Populus Rhizosphere	MVICIVSIFILTGNFIPKSDVFAQVISNSLEESDVYIQLSNILDNTEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNQIVDNPIHGGD*
Ga0114129_103877123	3300009147	Populus Rhizosphere	MVHVTTVVIFIVGVFILTGNFIPKNDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGQNDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0111538_101685173	3300009156	Populus Rhizosphere	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYSKLYNILDNTEKDLGNIVQAINSEEKDNALNILSNITTNIKEIRNGLNLIVDNPIHGGD*
Ga0111538_128973101	3300009156	Populus Rhizosphere	MVHVTTVVIFIVGVFILTGNFIPKYDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0105104_100028266	3300009168	Freshwater Sediment	MVHVTTVVIILIVSVFILTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIVDNPIYGGD*
Ga0105104_102128291	3300009168	Freshwater Sediment	MVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKELRNGLNLIVDNPIHGGD*
Ga0105249_104888461	3300009553	Switchgrass Rhizosphere	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYTKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITMNIKELRNGLNLIVDNPIHGGD*
Ga0105340_11505621	3300009610	Soil	MVHVTTVVIFIVSFFILTGNFIPKYDVFAQVISDDLEESNIYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0126307_102328591	3300009789	Serpentine Soil	MVICIISIFILTGNFIPKSNVFAQVISNSLEESDVYIQLSNILDNTEKDLDNIVQAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPVHGGD*
Ga0126307_104744551	3300009789	Serpentine Soil	MVICIVSLFILTGIFIPKSDVFAQVISNDLEESNIYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNP
Ga0126304_100119492	3300010037	Serpentine Soil	MVICIVSLFILTGIFIPKSDVFAQVISNDLEESNIYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD*
Ga0126315_100042458	3300010038	Serpentine Soil	MAICIISIFILAGNFIPKSDVFAQVISNNLEESDVYIQLSNILDNTEKDLDNIVQAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPVHGGD*
Ga0126309_101151541	3300010039	Serpentine Soil	MVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITKNIKEIRNGLNLIVDNPIHGGD*
Ga0126306_101783872	3300010166	Serpentine Soil	MVICIISIFILAGNFIPKSDVFAQVISNNLEESDVYIQLSNILDNTEKDLDNIVQAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPVHGGD*
Ga0127502_108603592	3300011333	Soil	CIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNILSNITMNIKEIRNGLNLIVDNPIHGGD*
Ga0157285_100036312	3300012897	Soil	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYTKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITMNIKEIRNGLNLIVDNPIHGGD*
Ga0157291_102483471	3300012902	Soil	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNL
Ga0157302_102817411	3300012915	Soil	VILMIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYTKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITMNIKEIRNGLNLMVDNPIHGGD*
Ga0164241_104747601	3300012943	Soil	MVIFIVSVFIVTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQILGNVTQAINSGETDNSLNIISNITTNIKEIRNGLNLIVDNPIYGGD*
Ga0157307_10432751	3300013096	Soil	MVHVTTVVIFIVSLFILTGNFIPKYDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0075323_11355431	3300014301	Natural And Restored Wetlands	MVHVTTVVIFIVSVFILIGNFIPKYDVFAQVISDDLEESDVYIQLSNILDNTEQNLGHVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD*
Ga0157380_127142571	3300014326	Switchgrass Rhizosphere	ILIVSVFILTGNFITKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIIDNPIYGGD*
Ga0173483_100492671	3300015077	Soil	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYTKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITMNIKEIRNGLNLMVDNPIHGGD*
Ga0132258_117289821	3300015371	Arabidopsis Rhizosphere	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNI
Ga0132258_121893892	3300015371	Arabidopsis Rhizosphere	MVICIVSIFILTGNFIPKSDVFAQVISNSLEESDVFIQLSNILDNSEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNLIVDNPIHGGD*
Ga0132258_129675142	3300015371	Arabidopsis Rhizosphere	MVICIVSIFILTCNFIPKPNVFAQVISNSLEESDVYSKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITTNIKEIRNGLNLIVDNPIHGGD*
Ga0132257_1008547341	3300015373	Arabidopsis Rhizosphere	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNSLEESDVYSKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITTNIKEIRNGLNLIVDNPIHGGD*
Ga0184611_11338372	3300018067	Groundwater Sediment	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0184624_100109285	3300018073	Groundwater Sediment	LTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0184624_103285521	3300018073	Groundwater Sediment	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYTKLSGILDNTEQNLGNVTQAINSGENDNALNIISNITTSIKEIRNGLNLIVDNPIHGGD
Ga0184624_105188271	3300018073	Groundwater Sediment	MIYIRTMVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLVVDNPIHGGD
Ga0190275_100164013	3300018432	Soil	MVHLTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNLLDNTEQNLGNVTQAINSGEKDAALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0190275_105714292	3300018432	Soil	MVHVTTVVVFIVSIFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGQNDNALNIISNITTNIQEIRNGLNLIVDNPIYGGD
Ga0190269_100425052	3300018465	Soil	MIYIRTMVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKELRNGLNLIVDNPIHGGD
Ga0190268_105105592	3300018466	Soil	MVHVTTVVVFIVSIFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGQNDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0190270_101594461	3300018469	Soil	MIYIRTMVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD
Ga0190270_105270371	3300018469	Soil	LNVILMVHVTTVVVFIVSIFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0190270_116898231	3300018469	Soil	MVHATTVVMFIVSVFILTGNFIPKSDVFAQVISGDLEESNVYTKLSDILDNTEQNLGNVTQAINSGENDNALNIISNITTSIKEIRNGLNLIVDNPIHGGD
Ga0190274_102408123	3300018476	Soil	MIYIRTMVICIISLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD
Ga0190271_100436553	3300018481	Soil	MVHITTVVIFIVSLFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIVDNPIHGGD
Ga0190271_106730052	3300018481	Soil	LTGNFILKYDVFAQVISNDLEESNVYIQLSNILDDTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIYGGD
Ga0190273_102814151	3300018920	Soil	MVYATKPVVIFIISIFILTVGGNFMHISNAFAQVITGGEEESVVYMQLSDILDNTQKDLDDLVQAINSGEKDNALNITSNITTNIKEIENGLDLIVNNPIYGGD
Ga0190273_109183611	3300018920	Soil	MVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNMTMNIKEIRNGLNLIVDNPIHGGD
Ga0173481_100018605	3300019356	Soil	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYTKLSNILDNTEKDLGNIVQAINSEEKDNALNILSNITMNIKELRNGLNLIVDNPIHGGD
Ga0190267_116065221	3300019767	Soil	MIYIRTMVICIVSLFILTGIFIPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDSPIHGGD
Ga0193741_10845752	3300019884	Soil	MVNATKPVVIIIISIFILTGGGNFMHISNVFAQVITSGEEESVVYMQLSDILDNTQKDLDDVVHAINSGEKDNALNIISNITTNIKEIEHGLDLIVNNPIYGGD
Ga0196959_100531932	3300021184	Soil	MININTLVICIVSVFILFGVNFILKADVFAQVISNSEEESDVYMQLSSILDNTKKDLDDVVQAINLGEKDNALNIISNITMNIKEIENGLNLIVDNPIHGGD
Ga0196962_100155592	3300024430	Soil	MININTLVICIVSVFILFGVNFILKADVFAQVISNSEEESDVYMQLSSILDNTKKDLDDVVQAINSGEKDNALNIISNITMNIKEIENGLNLIVDNPIHGGD
Ga0210061_10001607	3300025537	Natural And Restored Wetlands	MVHVTTVVIFIVSVFILIGNFIPKYDVFAQVISDDLEESDVYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0210115_10135182	3300025791	Natural And Restored Wetlands	MVHVTTVVIFIVSVFILIGNFIPKYDVFAQVISDVLEESDVYIQLSNILDNTEQNLGHVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0210143_10027313	3300025792	Natural And Restored Wetlands	MVHVTTVVIFIVSVFILIGNFIPKYDVFAQVISDVLEESDVYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0207647_105578851	3300025904	Corn Rhizosphere	MIYIKTTVICIVSIFILTCNFIPKPNVFAQVISNGLEESDVYSKLYNILDNTEKDLGNIVQAINSEQKENALNILSNITTNIKEIRNGLNLIVDNPIHGGD
Ga0214467_10084862	3300027075	Soil	VSIFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGQNDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0214467_10336131	3300027075	Soil	IPKSDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD
Ga0209981_10510651	3300027378	Arabidopsis Thaliana Rhizosphere	MIYIRTMVICIVSLFILTGIFIPKSDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0209996_10084041	3300027395	Arabidopsis Thaliana Rhizosphere	MVHVTTVVIFIVSLFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0209984_10571891	3300027424	Arabidopsis Thaliana Rhizosphere	VTTLVIFIVGVFILTGNFIPKYDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0209999_10757501	3300027543	Arabidopsis Thaliana Rhizosphere	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISNDLEESNVYIQLSNILDNTEKDLGNIVEAINSGEKDNALNIISNITMNIKELRNGLNLIVDNPIHGGD
Ga0209982_10715881	3300027552	Arabidopsis Thaliana Rhizosphere	MVHVTTVVIFIVGVFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNILDNTEQNLSNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIYGGD
Ga0214468_10565232	3300027647	Soil	MKNIKTLVIYIISVFILVGGNFISKADVLAQVITNSEEESVVYMQLSDILDNTEKSLDDVVQAINSGEKDNALNIISNITMNIKEIENGLNLIVDNPIHGGD
Ga0209593_100621572	3300027743	Freshwater Sediment	MVHVTTVVIILIVSVFILTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIVDNPIYGGD
Ga0209481_101105973	3300027880	Populus Rhizosphere	MIYIRTMVICIVSIFILTGNFIPKSDVFAQVISNSLEESDVYIQLSNILDNTEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNLIVDNPIHGGD
Ga0209486_101257631	3300027886	Agricultural Soil	MIYIKTLVICIVSVFFLTGNFIPKSDVFAQVISNNLEESDVYIQLSNILDNTEKNLGNVIDAINSGEKENALNIISNITMNIKEIRNGINLIVDNPIHGGD
Ga0209382_107215742	3300027909	Populus Rhizosphere	MIYIRTMVICIVSIFILTGNFIPKSNVFAQVISNSLEESDVYIQLSNILDNSEKDLSNIVQAINSGEKDNALKIISNITMNIKEIRTGLNLIVDNPIHGGD
Ga0268265_117586251	3300028380	Switchgrass Rhizosphere	FILTCNFIPKPNVFAQVISNGLEESDVYSKLYNILDNTEKDLGNIVQAINSEQKENALNILSNITTNIKEIRNGLNLIVDNPIHGGD
Ga0299907_102113603	3300030006	Soil	MININTLVICIVSVFILLGVNFIPKADVFAQVISNSEEESDVYMQLSSILDNTKKDLADVVQAINSGEKDNALNIISNITMNIKEIENGLNLIVDNPIHGGD
Ga0299913_112618241	3300031229	Soil	PVVIFIISIFILTGGGNFMHISNVFAQVITSGEEESVVYMQLSDILDNTQKDLDDVVQAINSGEKDNALNIISNITTNIKEIEHGLDLIVDNPIYGGD
Ga0307408_1009518661	3300031548	Rhizosphere	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYNQLSNILYNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0310886_107867221	3300031562	Soil	MVHVTTLVIFIVGVFILNGNFIPKYDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0307410_107728081	3300031852	Rhizosphere	MVICIISIFILTGNFIPKSDVFAQVISNSLEESDVYIQLSNILDNTEKDLDNIVQAINSGEKDNALNIISNITMNIKELRNGLNLIVDNPIHGGD
Ga0307407_103624752	3300031903	Rhizosphere	MVICIISIFILTGNFIPKSDVFAQVISNNLEESDVYIQLSNILDNTEKDLDNIVQAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD
Ga0310900_108260971	3300031908	Soil	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYTQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIKEIRNGLNLIVDNPIHGGD
Ga0310884_107984971	3300031944	Soil	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYNQLSNILDNTEQNLGNVTQAINSGENDKALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0307409_1019250231	3300031995	Rhizosphere	MAICIISIFILAGNFIPKSDVFAQVISNNLEESDVYIQLSNILDNTEKDLDNIVQAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPVHGGD
Ga0307416_1033174152	3300032002	Rhizosphere	MIYIRTMVICIVSIFILTGNFIPKSNVFAQVISNSLEESDVYIQLSNILDNSEKDLSNIVQAINSGEKDNALKIISNITTNIKEIRTG
Ga0307414_107613442	3300032004	Rhizosphere	MAICIISIFILAGNFIPKSDVFAQVISNNLEESDVYIQLSNILDNTEKDLDNIVQAINSGEKDNALNIISNITMNIKEIRNGLNLIVDNPIHGGD
Ga0364927_0113688_282_587	3300034148	Sediment	MVNVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNLLDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0364935_0239070_217_522	3300034151	Sediment	MVHVTTVVIFIVSVFILTGNFIPKYDVFAQVISDDLEESNVYIQLSNLLDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD
Ga0364943_0358972_138_443	3300034354	Sediment	MVHVTTVVIFIVSVFILIGNFIPKYDVFAQVISDDLEESNIYIQLSNILDNTEQNLGNVTQAINSGENDNALNIISNITTNIQEIRNGLNLIVDNPIHGGD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094365

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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