Metagenome / Metatranscriptome Family F094323

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094323
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	89 residues
Representative Sequence	MIIRVLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSS
Number of Associated Samples	90
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.04 %
% of genes near scaffold ends (potentially truncated)	48.11 %
% of genes from short scaffolds (< 2000 bps)	97.17 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.830 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.792 % of family members)
Environment Ontology (ENVO)	Unclassified (43.396 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.113 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.95% β-sheet: 0.00% Coil/Unstructured: 44.05%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07286	D-Glu_cyclase	8.49
PF02538	Hydantoinase_B	2.83
PF07769	PsiF_repeat	1.89
PF07647	SAM_2	0.94
PF00004	AAA	0.94
PF08734	GYD	0.94
PF07978	NIPSNAP	0.94
PF04986	Y2_Tnp	0.94
PF12770	CHAT	0.94
PF07589	PEP-CTERM	0.94
PF01738	DLH	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG4336	Uncharacterized conserved protein YcsI, UPF0317/DUF1446 family	Function unknown [S]	8.49
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	5.66
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
All Organisms	root	All Organisms	47.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
cellular organisms	root	All Organisms → cellular organisms	47.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13.21 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.66 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.66 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.89 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.94 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.66 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.89 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %
unclassified Acetobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.66 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.89 %
Paraburkholderia podalyriae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia podalyriae	0.94 %
Acetobacteraceae bacterium AT-5844	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100310158	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300002245\|JGIcombinedJ26739_101878122	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005174\|Ga0066680_10763734	Not Available	586	Open in IMG/M
3300005363\|Ga0008090_15473227	Not Available	572	Open in IMG/M
3300005471\|Ga0070698_101294297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300005559\|Ga0066700_11042080	Not Available	537	Open in IMG/M
3300005764\|Ga0066903_104616210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → unclassified Acetobacteraceae → Acetobacteraceae bacterium AT-5844	734	Open in IMG/M
3300006028\|Ga0070717_10382016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300006172\|Ga0075018_10721408	Not Available	541	Open in IMG/M
3300007258\|Ga0099793_10266277	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300007788\|Ga0099795_10617603	Not Available	517	Open in IMG/M
3300010043\|Ga0126380_11324632	Not Available	628	Open in IMG/M
3300010048\|Ga0126373_10185826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2003	Open in IMG/M
3300010358\|Ga0126370_12434908	Not Available	520	Open in IMG/M
3300010359\|Ga0126376_10919508	All Organisms → cellular organisms → Bacteria → Proteobacteria	867	Open in IMG/M
3300010361\|Ga0126378_10361875	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300010366\|Ga0126379_10050032	All Organisms → cellular organisms → Bacteria → Proteobacteria	3434	Open in IMG/M
3300010366\|Ga0126379_10819921	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300010366\|Ga0126379_13671363	Not Available	514	Open in IMG/M
3300010376\|Ga0126381_100303380	Not Available	2187	Open in IMG/M
3300010398\|Ga0126383_10898239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300012199\|Ga0137383_11077015	Not Available	583	Open in IMG/M
3300012203\|Ga0137399_10190166	Not Available	1661	Open in IMG/M
3300012685\|Ga0137397_10691641	Not Available	758	Open in IMG/M
3300012917\|Ga0137395_10529276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	850	Open in IMG/M
3300012918\|Ga0137396_10256400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1290	Open in IMG/M
3300012918\|Ga0137396_10713642	Not Available	739	Open in IMG/M
3300012922\|Ga0137394_10497350	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300012923\|Ga0137359_10363856	Not Available	1285	Open in IMG/M
3300012923\|Ga0137359_10393160	Not Available	1230	Open in IMG/M
3300012923\|Ga0137359_11076329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300012925\|Ga0137419_11414712	Not Available	587	Open in IMG/M
3300012944\|Ga0137410_11897475	Not Available	528	Open in IMG/M
3300012948\|Ga0126375_12002909	Not Available	512	Open in IMG/M
3300012971\|Ga0126369_13664021	Not Available	503	Open in IMG/M
3300016270\|Ga0182036_10396969	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300016294\|Ga0182041_10377126	Not Available	1200	Open in IMG/M
3300016294\|Ga0182041_10429093	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300016341\|Ga0182035_11259888	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300016357\|Ga0182032_10169865	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300016357\|Ga0182032_11103874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300016387\|Ga0182040_10752478	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300016404\|Ga0182037_10880619	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300016422\|Ga0182039_10792580	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300016445\|Ga0182038_10359798	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300020170\|Ga0179594_10351325	Not Available	559	Open in IMG/M
3300020199\|Ga0179592_10489664	Not Available	528	Open in IMG/M
3300020580\|Ga0210403_10144134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia podalyriae	1946	Open in IMG/M
3300021168\|Ga0210406_11012591	Not Available	617	Open in IMG/M
3300021170\|Ga0210400_11471204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300021432\|Ga0210384_11753238	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300021559\|Ga0210409_11137067	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300021560\|Ga0126371_10298845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1736	Open in IMG/M
3300021560\|Ga0126371_12938370	Not Available	577	Open in IMG/M
3300021560\|Ga0126371_13272858	Not Available	548	Open in IMG/M
3300021560\|Ga0126371_13290547	Not Available	546	Open in IMG/M
3300022529\|Ga0242668_1138523	Not Available	526	Open in IMG/M
3300022724\|Ga0242665_10397153	Not Available	503	Open in IMG/M
3300022726\|Ga0242654_10267701	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300027610\|Ga0209528_1144020	Not Available	522	Open in IMG/M
3300028047\|Ga0209526_10117899	Not Available	1865	Open in IMG/M
3300029636\|Ga0222749_10604939	Not Available	599	Open in IMG/M
3300030776\|Ga0075396_1714664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	570	Open in IMG/M
3300030973\|Ga0075395_11385728	Not Available	643	Open in IMG/M
3300031122\|Ga0170822_13942305	Not Available	544	Open in IMG/M
3300031231\|Ga0170824_101542611	Not Available	537	Open in IMG/M
3300031446\|Ga0170820_17379799	Not Available	537	Open in IMG/M
3300031469\|Ga0170819_12037547	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300031474\|Ga0170818_113276013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300031573\|Ga0310915_10702900	Not Available	714	Open in IMG/M
3300031668\|Ga0318542_10368384	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031679\|Ga0318561_10522146	Not Available	654	Open in IMG/M
3300031680\|Ga0318574_10329758	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300031719\|Ga0306917_10211144	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300031723\|Ga0318493_10741737	Not Available	552	Open in IMG/M
3300031736\|Ga0318501_10800094	Not Available	522	Open in IMG/M
3300031764\|Ga0318535_10472206	Not Available	558	Open in IMG/M
3300031768\|Ga0318509_10431581	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300031768\|Ga0318509_10601587	Not Available	612	Open in IMG/M
3300031778\|Ga0318498_10187988	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300031793\|Ga0318548_10381779	Not Available	691	Open in IMG/M
3300031795\|Ga0318557_10311901	Not Available	722	Open in IMG/M
3300031796\|Ga0318576_10102482	Not Available	1307	Open in IMG/M
3300031798\|Ga0318523_10596887	Not Available	544	Open in IMG/M
3300031846\|Ga0318512_10446924	Not Available	652	Open in IMG/M
3300031860\|Ga0318495_10339554	Not Available	666	Open in IMG/M
3300031879\|Ga0306919_11127843	Not Available	597	Open in IMG/M
3300031879\|Ga0306919_11233598	Not Available	567	Open in IMG/M
3300031880\|Ga0318544_10290186	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031896\|Ga0318551_10825903	Not Available	539	Open in IMG/M
3300031897\|Ga0318520_10256741	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300031912\|Ga0306921_10877247	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300031912\|Ga0306921_11997617	Not Available	618	Open in IMG/M
3300031945\|Ga0310913_10668479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300031947\|Ga0310909_10762742	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300031954\|Ga0306926_11802393	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300031954\|Ga0306926_12520823	Not Available	563	Open in IMG/M
3300032035\|Ga0310911_10517700	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300032035\|Ga0310911_10916762	Not Available	505	Open in IMG/M
3300032059\|Ga0318533_10237561	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300032065\|Ga0318513_10435202	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300032076\|Ga0306924_10639674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300032091\|Ga0318577_10530164	Not Available	561	Open in IMG/M
3300032180\|Ga0307471_102628610	Not Available	638	Open in IMG/M
3300033289\|Ga0310914_11063073	Not Available	710	Open in IMG/M
3300033290\|Ga0318519_10557482	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.06%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.06%
Sediment	Environmental → Aquatic → Sediment	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.45%
Loam	Environmental → Terrestrial → Soil → Loam	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1003101581	3300002245	Forest Soil	MIIRVLITAVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGRGAPPPRQSSSS*
JGIcombinedJ26739_1018781222	3300002245	Forest Soil	MIIRALITAIALFLAGYGFWDGVLSGGHVLNPFGIIFLFLSGAVWLGWKPIREIFRSTREDSVIDTIVKGMEKRAPRQRQSSSS*
Ga0066680_107637341	3300005174	Soil	VRPKKITEREAPMIIRVLITTVALLLAGYAFWDGTLGGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0008090_154732271	3300005363	Tropical Rainforest Soil	MIIRVLITAMALLLAGYAFWDGALGGGHVLNPFGILFLFLSGAVWFGWERIREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSC*
Ga0070698_1012942972	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIIRALITAIALFLAGYAFWDGVLSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRATRDDSVIDTIVKSMGTRAPRRRQS*
Ga0066700_110420801	3300005559	Soil	KITEREAPMIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0066903_1046162102	3300005764	Tropical Forest Soil	MIIRVLITVMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKRICEIFSSTSDASAIDNIVKGTGGNIVKGMGERAAGHRQSSSS*
Ga0070717_103820162	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIIRVLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSS*
Ga0075018_107214081	3300006172	Watersheds	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0099793_102662772	3300007258	Vadose Zone Soil	MIIKVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKRAPPPRQSSSS*
Ga0099795_106176031	3300007788	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGVLSGGHVLNPFGILFLFLSGAVWFGWRPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0126380_113246322	3300010043	Tropical Forest Soil	MALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKRICEIFSSTSDASAIDNIVKGTGGNIVKGMGERAAAHRRSSSS*
Ga0126373_101858264	3300010048	Tropical Forest Soil	MIIRVLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAAWLGWERIREIFRSTRDESVIPTIVKGIGKRAPPPRPVSAAWFRRPKSRMLSRTDVIE*
Ga0126370_124349082	3300010358	Tropical Forest Soil	MALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAAWLGWERIREIFRSTRDESVIPTIVKGIGKRAPPPRPVSAAWFRRPKS
Ga0126376_109195081	3300010359	Tropical Forest Soil	MMIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWFGWKPIREIFRSTRDESVIPTIVKE
Ga0126378_103618751	3300010361	Tropical Forest Soil	MMIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWFGWKPIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS*
Ga0126379_100500322	3300010366	Tropical Forest Soil	MIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWFGWKPIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS*
Ga0126379_108199213	3300010366	Tropical Forest Soil	GYAFWDGALSGGHILNPFGILFLFLSGAVWLGWERISEIFSSTSDASAIDNIVKGTGGNIVKGMGERAAGHRQSSSS*
Ga0126379_136713631	3300010366	Tropical Forest Soil	IIRLLITAMALLLAGYAFWDDALSGGHVLNPFGIMFLFLSGAVWLGWKPIREIFSATRDASVIPTIVKGIGKRTSPPRQSSSS*
Ga0126381_1003033803	3300010376	Tropical Forest Soil	MMGFPFDIPTYSGRPKSRRPNWIASHHRTERKITEGEVLMIIRVLITAVALLLAGYAFWDGALSGGHVLNSFGILFLFLSGAVWFGWERIREIFRSTRDESVIPTIVKGIGKRAPPPRQSSSC*
Ga0126383_108982392	3300010398	Tropical Forest Soil	MIIRVLITAVALLLAGYAFWDGALSGGHVLNSFGILFLFLSGAVWFGWERIREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSC*
Ga0137383_110770151	3300012199	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREILRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0137399_101901662	3300012203	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRKSSSS*
Ga0137397_106916412	3300012685	Vadose Zone Soil	MIIRVLITTVTLLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0137395_105292762	3300012917	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPARQSSSS*
Ga0137396_102564001	3300012918	Vadose Zone Soil	MIIRVLITTVTLLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWS
Ga0137396_107136422	3300012918	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKRAPPPRQSSSS*
Ga0137394_104973501	3300012922	Vadose Zone Soil	MIIRVLITTAALLLTGYAFWDGALSGGHILNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKRAPPPRQSSSS*
Ga0137359_103638562	3300012923	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAMWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPLPRQSSS*
Ga0137359_103931602	3300012923	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREILRSTRDESVIPTIAAGAGWSIKGMGKRAPPPRQSSSS*
Ga0137359_110763291	3300012923	Vadose Zone Soil	APMIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0137419_114147122	3300012925	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMG
Ga0137410_118974751	3300012944	Vadose Zone Soil	MIIRVLITTAALLLAGYAFWNGALSGGHILNPFGILFLSLSGAVWFGWKPLREVFKSTTHESVIPNFAAGAGWSIKGMGKGAPPPRQSSSS*
Ga0126375_120029091	3300012948	Tropical Forest Soil	VSGKNLKANRIEGHRQTEKKTAEGKVPMIVRVLITATALLLAGYAFWDGVLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRATRDESVIPTIVKGMGKRAPPPRQSSSS*
Ga0126369_136640212	3300012971	Tropical Forest Soil	RLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKRILEIFRSTRDEPVIPTIVKGMGTRAPPPRQSSSS*
Ga0182036_103969691	3300016270	Soil	IVRPKERSLKGSFYDDIRVLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVAGIGKSAPPSRQSSSS
Ga0182041_103771262	3300016294	Soil	MMIIRVLITAMALLLAGYAFWDGALSGGHILNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPSQRQSSSS
Ga0182041_104290931	3300016294	Soil	QPPVKAKLDRKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVTGIRKSASPSRQSSSS
Ga0182035_112598882	3300016341	Soil	MMIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWLGWKQICEIFRSTSDDSAIDNIVKGT
Ga0182032_101698652	3300016357	Soil	MIIRALITGMALLLPGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVIGIGKRTSPPRQSSSS
Ga0182032_111038741	3300016357	Soil	MIIRVLITAMALLLAGYAFWDGTLSGGHILNPFGIMFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSS
Ga0182040_107524781	3300016387	Soil	MIIRVLITAMALLLAGYAFWDGTLSGGHILNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS
Ga0182037_108806192	3300016404	Soil	MIIRVLITAMALLLAGYAFWDGTLSGGHILNPFGIMFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS
Ga0182039_107925801	3300016422	Soil	MMIIRVLITAMALLLAGYAFWDGALSGGHILNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS
Ga0182038_103597981	3300016445	Soil	MIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWLGWKQIREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSS
Ga0179594_103513251	3300020170	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0179592_104896642	3300020199	Vadose Zone Soil	MIIRVLITTVALLLAGYAFWDGVLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0210403_101441344	3300020580	Soil	MIIRVLITTAALLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKRAPPPRQSASS
Ga0210406_110125912	3300021168	Soil	ITEREAPMIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKHAPPPRRL
Ga0210400_114712041	3300021170	Soil	VLITTMALLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKRAPPPRQSASS
Ga0210384_117532381	3300021432	Soil	ALFLAGYAFWDGVLSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRATRDDSVIDTIVKSMGTRAPRRRQS
Ga0210409_111370671	3300021559	Soil	MIIRVLITTAALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKG
Ga0126371_102988451	3300021560	Tropical Forest Soil	MIIRVLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAAWLGWERIREIFRSTRDESVIPTIVKGIGKRAPPPRPVSAAWFRRPKSRMLSRTDVIE
Ga0126371_129383702	3300021560	Tropical Forest Soil	MIIRVLITVMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKRICEIFSSTSDASAIDNIVKGTGGNIVKGMGERAAGHRQSSSS
Ga0126371_132728581	3300021560	Tropical Forest Soil	MIIRVLMTALALLLAGFAFWDGTLSGGHILNPFGILFLFLSGAVWLGWKPLREIFRSTRDESAIPTIVKGMGRRALPP
Ga0126371_132905471	3300021560	Tropical Forest Soil	YFKIAKAKPDRKAVVRPRKITEGEVPMITRVLITAMALLLAGYAFWDGALSGGHLLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPPPRKSSSS
Ga0242668_11385231	3300022529	Soil	EKITEREAPMIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKHAPPPRRSSSS
Ga0242665_103971531	3300022724	Soil	YSLGPKSRRPSRTAYHRQTKKITEREAPMIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKHAPPPRRL
Ga0242654_102677012	3300022726	Soil	MIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKHAPPPRRL
Ga0209528_11440201	3300027610	Forest Soil	KSRRPSRIASHQTERKITEREAPMIIRVLITTVALLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0209526_101178992	3300028047	Forest Soil	MIIRALITAIALFLAGYGFWDGVLSGGHVLNPFGIIFLFLSGAVWLGWKPIREIFRSTRDDSVIDTIVKGMEKRAPRQRQSSSS
Ga0222749_106049392	3300029636	Soil	VRPKNREAPMIIRVLITTAALLLAGYAFWDGALSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKRAPPPRQSASS
Ga0075396_17146641	3300030776	Soil	APMIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTREESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0075395_113857281	3300030973	Soil	EREAPMIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKPLSEIFRLTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0170822_139423052	3300031122	Forest Soil	EREAPMIIRVIITTVALLLTGYAFWDGVLSGGHVLNPFGILFLFLSGAVWFGWKPLREIFRSTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0170824_1015426111	3300031231	Forest Soil	TIVRPEKITEREAPMIIRVLITTVALLLAGYAFWDGVLSGGHVLNPFGILFLFLSGAVWFGWKQLREIFRLTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0170820_173797991	3300031446	Forest Soil	TIVGPKKSPNGRAPMIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKQLREIFRLTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0170819_120375471	3300031469	Forest Soil	MIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLFLSGAVWFGWKPLSEIFRLTRDESVIPTIAAGAGWSIKGMGKGAPPPRQSSSS
Ga0170818_1132760132	3300031474	Forest Soil	MIIRVLITATALLLAGYAFWDGVLDGGHVLNPFGILFLFLSGAVWLGWKPLREIFRSTSDASVIPTIVKG
Ga0310915_107029002	3300031573	Soil	MMIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWLGWKQIREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSS
Ga0318542_103683841	3300031668	Soil	PMIIRVLITAMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGALWLGWKPLHEIFESIRDESVIPTIVKGMGKRAPPPRQSSSS
Ga0318561_105221461	3300031679	Soil	MIIRVLITAVALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWFGWKSILEILRSTRDESVIPTIVKGIGKRASPPRQSSSS
Ga0318574_103297582	3300031680	Soil	GVVTSTQPPVKAKLDRKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVAGIGKSAPPSRQSSSS
Ga0306917_102111442	3300031719	Soil	MIIRVLITAMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGALWLGWKPLHEIFESIRDESVIPTIVKGMGKRAPPPRQSSSS
Ga0318493_107417372	3300031723	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTTLKGIGKRTSPPRQS
Ga0318501_108000941	3300031736	Soil	VVTSTQPPVKAKLDRKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKRILEIFRSTRDESVIPTIVTGIGKSAPPSRQSSSS
Ga0318535_104722061	3300031764	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVIGIGKRTSPPRQSSSS
Ga0318509_104315812	3300031768	Soil	VVTSTQPPVKAKLDRKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVAGIGKSAPPSRQSSSS
Ga0318509_106015871	3300031768	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIAKGIGKRTSP
Ga0318498_101879882	3300031778	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVIG
Ga0318548_103817791	3300031793	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVAGIGKSAPPSRQSSSS
Ga0318557_103119011	3300031795	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVIGIGKRTS
Ga0318576_101024822	3300031796	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTTLK
Ga0318523_105968871	3300031798	Soil	LIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVAGIGKECSAFPAIIIFLTSY
Ga0318512_104469241	3300031846	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTTLKGIGKRTSPPRQSSSS
Ga0318495_103395541	3300031860	Soil	MIIRALITGMALLLPGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIAKGIGKRTSPPRQSSSS
Ga0306919_111278432	3300031879	Soil	IAKVKSDRKPSSDRKQRSLRGEVHMIIRVLITAVALLLAGYAFCDGALSGGHVLNPFGIMFLFLSGAVWFGWKSILEILRSTRDESVIPTIVKGIGKRASPPRQSSSS
Ga0306919_112335981	3300031879	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVIGIGKR
Ga0318544_102901861	3300031880	Soil	RKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVAGIGKSAPPSRQSSSS
Ga0318551_108259032	3300031896	Soil	ERFSMIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVIGIGKRTSPPRQSSSS
Ga0318520_102567412	3300031897	Soil	MIIRALITGMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIAKGIGKRTSPPRQSSSS
Ga0306921_108772472	3300031912	Soil	MIIRVLITAVALLLAGYAFCDGALSGGHVLNPFGIMFLFLSGAVWFGWKSILEILRSTRDESVIPTIVKGIGKRASPPRQSSSS
Ga0306921_119976171	3300031912	Soil	MIIRVLITAMALLLAGYAFWDGALSGGHILNPFGILFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS
Ga0310913_106684793	3300031945	Soil	MALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVAGIGKSAPPS
Ga0310909_107627421	3300031947	Soil	MMIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWLGWKQIREIFRSTRDESVIPTIVKGMGKRA
Ga0306926_118023932	3300031954	Soil	MIIRIIITVMALLLAGYAFWDGALSGGHVLNPFGILFLFLSGALWLGWKPLHEIFESIRDESVIPTIVKGMGKRAP
Ga0306926_125208231	3300031954	Soil	KERSLKGSFYDDIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWLGWKQIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS
Ga0310911_105177002	3300032035	Soil	MIIRVLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKPIREIFRSTRDESVIPTIVKGMGKRAPSRR
Ga0310911_109167621	3300032035	Soil	VVTSTQPPVKAKLDRKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKRILEIFRSTKDESVIPTIVTGIGKSAAPSRQSSSS
Ga0318533_102375612	3300032059	Soil	MIIRVLITAVALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKPIREVFRSTRDESVIPTIVKGIGKPTSPPRQSSSS
Ga0318513_104352022	3300032065	Soil	AKLDRKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGGKRILEIFRSTRDESVIPTIVAGIGKSAPPSRQSSSS
Ga0306924_106396742	3300032076	Soil	MMIIRVLITALALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWLGWKQIREIFRSTRDESVIPTIVKGMGKRAPSQRQSSSS
Ga0318577_105301641	3300032091	Soil	LITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKQIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS
Ga0307471_1026286101	3300032180	Hardwood Forest Soil	MIIRVLITTVALLLAGYAFWDGTLSGGHVLNPFGILFLSLSGAVWFGWKPLREIFRSTRDESVIPTIVKGMGKRAPPPRQSSSS
Ga0310914_110630732	3300033289	Soil	MIIRVLITAMALLLAGYAFWDGALSGGHILNPFGIMFLFLSGAVWLGWKQIREIFRSTRDESVIPTIVKGMGKRAPSRRQSSSS
Ga0318519_105574821	3300033290	Soil	SRAKLDRKPSSDRRKDHRREASLIIRLLITAMALLLAGYAFWDGALSGGHVLNPFGIMFLFLSGAVWLGWKRILEIFRSTRDESVIPTIVTGIGKSPPSRQSSSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094323

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences