Metagenome / Metatranscriptome Family F094320

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094320
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	113 residues
Representative Sequence	TPGEDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLTGEVSRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Number of Associated Samples	89
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.92 %
% of genes near scaffold ends (potentially truncated)	92.45 %
% of genes from short scaffolds (< 2000 bps)	93.40 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.566 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.830 % of family members)
Environment Ontology (ENVO)	Unclassified (59.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.943 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.75% Coil/Unstructured: 52.25%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00211	Guanylate_cyc	7.55
PF08031	BBE	2.83
PF01070	FMN_dh	1.89
PF10300	Iml2-TPR_39	0.94
PF13191	AAA_16	0.94
PF13458	Peripla_BP_6	0.94
PF01764	Lipase_3	0.94
PF04828	GFA	0.94
PF01965	DJ-1_PfpI	0.94
PF11799	IMS_C	0.94
PF02630	SCO1-SenC	0.94
PF13649	Methyltransf_25	0.94
PF00817	IMS	0.94
PF00892	EamA	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	7.55
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.83
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	1.89
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	1.89
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.94
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.57 %
Unclassified	root	N/A	9.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.57 %
Unclassified	root	N/A	9.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.57 %
Unclassified	root	N/A	9.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.85 %
Unclassified	root	N/A	9.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.13 %
Unclassified	root	N/A	9.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	77.36 %
Unclassified	root	N/A	9.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.36 %
Unclassified	root	N/A	9.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.36 %
Unclassified	root	N/A	9.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.36 %
Unclassified	root	N/A	9.43 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.36 %
Unclassified	root	N/A	9.43 %
Bradyrhizobium sp. C-145	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003223\|JGI26343J46809_1006972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300004080\|Ga0062385_10939317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300004082\|Ga0062384_100476694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300004091\|Ga0062387_100767042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300005332\|Ga0066388_101024057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1387	Open in IMG/M
3300006028\|Ga0070717_11505094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300006172\|Ga0075018_10861999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010043\|Ga0126380_10322298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1111	Open in IMG/M
3300010360\|Ga0126372_13038452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300010361\|Ga0126378_11590776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300010361\|Ga0126378_12012531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300010361\|Ga0126378_12610963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300010362\|Ga0126377_11127944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300010376\|Ga0126381_101775572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	891	Open in IMG/M
3300012089\|Ga0153924_1102195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300012948\|Ga0126375_10316576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1091	Open in IMG/M
3300012957\|Ga0164303_10870802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300016294\|Ga0182041_11011186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300016319\|Ga0182033_10395363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300016319\|Ga0182033_11142376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300016341\|Ga0182035_10272704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1376	Open in IMG/M
3300016404\|Ga0182037_11618400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300016445\|Ga0182038_12121339	Not Available	510	Open in IMG/M
3300017928\|Ga0187806_1210111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300017995\|Ga0187816_10519941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300018001\|Ga0187815_10386553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300018085\|Ga0187772_11412478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300020579\|Ga0210407_10827659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300021168\|Ga0210406_10885891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300021171\|Ga0210405_10655905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300021402\|Ga0210385_11228272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300021404\|Ga0210389_11475464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300021474\|Ga0210390_11056457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300022726\|Ga0242654_10334415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300027172\|Ga0208098_1007798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	945	Open in IMG/M
3300027173\|Ga0208097_1011082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300027812\|Ga0209656_10202992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300027889\|Ga0209380_10841714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300028906\|Ga0308309_10529714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1020	Open in IMG/M
3300029636\|Ga0222749_10653720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300031057\|Ga0170834_106129930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300031122\|Ga0170822_11846053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300031446\|Ga0170820_10904605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300031469\|Ga0170819_13120770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031474\|Ga0170818_106696570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300031543\|Ga0318516_10174409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	1238	Open in IMG/M
3300031544\|Ga0318534_10387371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300031545\|Ga0318541_10290172	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300031546\|Ga0318538_10400704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300031549\|Ga0318571_10260834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300031561\|Ga0318528_10587723	Not Available	597	Open in IMG/M
3300031668\|Ga0318542_10162886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1113	Open in IMG/M
3300031668\|Ga0318542_10179204	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300031708\|Ga0310686_102863717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1516	Open in IMG/M
3300031713\|Ga0318496_10040618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2386	Open in IMG/M
3300031718\|Ga0307474_10857293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300031724\|Ga0318500_10646572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300031747\|Ga0318502_10747381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	592	Open in IMG/M
3300031763\|Ga0318537_10014185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2722	Open in IMG/M
3300031763\|Ga0318537_10091450	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300031765\|Ga0318554_10497410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300031769\|Ga0318526_10289004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300031771\|Ga0318546_10953320	Not Available	604	Open in IMG/M
3300031777\|Ga0318543_10524046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300031794\|Ga0318503_10164822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	716	Open in IMG/M
3300031798\|Ga0318523_10180240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1054	Open in IMG/M
3300031805\|Ga0318497_10116849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1442	Open in IMG/M
3300031819\|Ga0318568_10776235	Not Available	595	Open in IMG/M
3300031833\|Ga0310917_10006113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6327	Open in IMG/M
3300031833\|Ga0310917_11068596	Not Available	539	Open in IMG/M
3300031833\|Ga0310917_11188985	Not Available	507	Open in IMG/M
3300031845\|Ga0318511_10265949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300031845\|Ga0318511_10438224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	601	Open in IMG/M
3300031879\|Ga0306919_10043762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2919	Open in IMG/M
3300031880\|Ga0318544_10007298	All Organisms → cellular organisms → Bacteria → Proteobacteria	3379	Open in IMG/M
3300031894\|Ga0318522_10030221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1827	Open in IMG/M
3300031897\|Ga0318520_10570466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300031910\|Ga0306923_10381823	Not Available	1605	Open in IMG/M
3300031910\|Ga0306923_11302540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300031910\|Ga0306923_11520919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300031912\|Ga0306921_10609927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1261	Open in IMG/M
3300031912\|Ga0306921_12345798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300031912\|Ga0306921_12602759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300031946\|Ga0310910_10695948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300031954\|Ga0306926_11484241	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300032025\|Ga0318507_10218890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300032035\|Ga0310911_10339715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300032042\|Ga0318545_10089568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300032042\|Ga0318545_10177490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300032043\|Ga0318556_10145119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1222	Open in IMG/M
3300032051\|Ga0318532_10035172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1685	Open in IMG/M
3300032059\|Ga0318533_10378198	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300032059\|Ga0318533_10889937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300032060\|Ga0318505_10043370	All Organisms → cellular organisms → Bacteria → Proteobacteria	1900	Open in IMG/M
3300032068\|Ga0318553_10389412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300032076\|Ga0306924_10336075	All Organisms → cellular organisms → Bacteria → Proteobacteria	1732	Open in IMG/M
3300032091\|Ga0318577_10136386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1164	Open in IMG/M
3300032091\|Ga0318577_10156855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300032094\|Ga0318540_10394488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300032180\|Ga0307471_103714620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300033289\|Ga0310914_11164760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300033290\|Ga0318519_10717094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300033290\|Ga0318519_10772701	Not Available	590	Open in IMG/M
3300033290\|Ga0318519_10898601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.57%
Aquatic	Environmental → Aquatic	8.49%
Fungi	Host-Associated → Fungi	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.57%
Freshwater	Environmental → Aquatic → Freshwater	7.55%
Sediment	Environmental → Aquatic → Sediment	0.94%
Mycelium	Host-Associated → Fungi → Mycelium	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.55%
Loam	Environmental → Terrestrial → Soil → Loam	5.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012089	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26343J46809_10069721	3300003223	Bog Forest Soil	VKPQPDQVGGATAAATPGDDRSGVYRGQMCYAAGGVTEPANCFEAQGVVLGDRITGEWPGREPGVTLYLAGEISRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN*
Ga0062385_109393171	3300004080	Bog Forest Soil	LPGPGADFSGVYRGQICYGPGGATEPVHCFEAQGVVLRNRITGEWPGRAPGVTVYLAGEIARSGELALHMHAQRADGSRFGVNDLIGTWRDGRIDATGSFRNGRKVTLNWRKN*
Ga0062384_1004766942	3300004082	Bog Forest Soil	VGGATAAATLGDDRSGVYRGQMCYAAGGATEPAHCFEAQAVVLGDRITGEWPGREPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVCDLVGTVRDARIDAKGSFRDGRGVTLNWSKN*
Ga0062387_1007670421	3300004091	Bog Forest Soil	DDRSGVYRGQMCYAAGGATEPAHCFEAQAVVLGDRITGEWPGREPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVCDLVGTVRDARIDAKGSFRDGRGVTLNWSKN*
Ga0066388_1010240571	3300005332	Tropical Forest Soil	SGVYRGQMCYAAGGATEPTQCFEAQGVVLGDRITGEWPGREPGVTIYLTGEISRAGEVAIHMHSRRADGSSFAVCDLIGTVHDGRIDAKGSFRDGRGVTLNWGKN*
Ga0070717_115050941	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PQPDSVSGATAAGTPGDDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN*
Ga0075018_108619991	3300006172	Watersheds	MAGSCLSTRPGTPGDDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN*
Ga0126380_103222981	3300010043	Tropical Forest Soil	YRGQMCYAASGASEPAHCFETQGVVLGDRVTGEWPGREPGVTVYLGGEIFRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDARGSFRDGSGVTLNWSKK*
Ga0126372_130384521	3300010360	Tropical Forest Soil	QMCYAAGGATEPAHCFEAQGVVLGDRITGEWPGREPGVTIYLGGEIFRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN*
Ga0126378_115907762	3300010361	Tropical Forest Soil	EPGQAKPQSEQVSNPTAAPTPGDDPSGVYRGQMCYAAGGATEPARCFEAQAVVLGNRISGEWPGRDPGVTIYLGGEISRTGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKK*
Ga0126378_120125311	3300010361	Tropical Forest Soil	ATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLSGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDARIDAKGSFRDGRGVTLNWSKN*
Ga0126378_126109631	3300010361	Tropical Forest Soil	DDRSGVYRGQMCYAAGGATEPAQCFEAQGVVLGDRITGEWPGREPGVTIYLTGEISRASEVAIHMHSKRADGSSFAVCDLIGTVHDGRIDAKGSFRDGRGVTLNWGKN*
Ga0126377_111279441	3300010362	Tropical Forest Soil	ASEPAHCFETQGVVLGDRVTGEWPGREPGVTVYLGGEIFRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDARGSFRDGSGVTLNWSKK*
Ga0126381_1017755721	3300010376	Tropical Forest Soil	AGQVKPQSDQVGGATAAATPGDDRSGVYRGQMCYAASGASEPAHCFETQGVVLGDRVTGEWPGREPGVTVYLGGEIFRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDARGSFRDGSGVTLNWSKK*
Ga0153924_11021951	3300012089	Attine Ant Fungus Gardens	QSDQVSGPTAAATPGDDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLGGEIFRTGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKK*
Ga0126375_103165761	3300012948	Tropical Forest Soil	YRGQMCYAAGGATEPAQCFEAQGVVLGDRITGEWPGREPGVTIYLTGEISRASEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDARGSFRDGSGVTLNWSKK*
Ga0164303_108708022	3300012957	Soil	CYAAGGATEPAQCFAAQAVVLDKRISGEWPGRDPGVTIHLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN*
Ga0182041_110111862	3300016294	Soil	QMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSAEVAIHMHSKRADGSSFAISDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0182033_103953631	3300016319	Soil	PEAGQVEPQPDPVSGPTAAATLGDDVSGLYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRNPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0182033_111423761	3300016319	Soil	PGDDPSGVYRGQMCYAAGAATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGDISQAGQVAIHMHSKRADGSSFAISDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0182035_102727041	3300016341	Soil	LGDDVSGIYRGQMCYAAGGATEPDHCFEAQAVVLGNRISGEWPGRNPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0182034_108918261	3300016371	Soil	HCFEAQAVVLGNRISGEWPGRNPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0182037_116184001	3300016404	Soil	CYGAGGATEPAHCFEAQAVVLRNQISGEWPGRVRDVTIYLGGQISQSGEVAIHMHSKRADGSSFAVSDLIGTLHDGRIDATGSFRNGRSVSLNWRKN
Ga0182038_121213391	3300016445	Soil	PAHCFEAQAVVLRNQISGEWPGRVRDVTIYLGGQISQSGEVAIHMHSKRADGSRFAVSDLIGTLRDGRIDATGRFRDGRSITLNWRKD
Ga0187806_12101112	3300017928	Freshwater Sediment	APEAGQVKPQSDQVGGATAAATPGDDRSGVYRGQMCYAAGGATELAHCFEAQGVVLGDRMTGEWPGREPGVTIYLAGEISRAGEVAIHMHSRRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0187816_105199411	3300017995	Freshwater Sediment	AATSGDDRSGVYRGQMCYAAGGATELAHCFEAQGVVLGDRMTGEWPGREPGVTIYLAGEISRAGEVAIHMHSRRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0187815_103865531	3300018001	Freshwater Sediment	QVKPQSDQVGGATAAATSGDDRSGVYRGQMCYAAGGATELAHCFEAQGVVLGDRMTGEWPGREPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKK
Ga0187772_114124781	3300018085	Tropical Peatland	GQMCYAAGGATELAHCFEAQGVVLGDRMTGEWPGREPGVTIYLAGEISRAGEVAIHMHSRRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0210407_108276591	3300020579	Soil	MCYAAGGATEPAHCFEAQAVVLGNRISGEWPSRDPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0210401_111814011	3300020583	Soil	HCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0210406_108858912	3300021168	Soil	PDRRPTPGDDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFHDGRGVTLNWSKN
Ga0210405_106559051	3300021171	Soil	AEALAAPVAGQVKPQPDSVSGATAAGTPGDDPSGVYRGQMCYAAGGATDPAHCFEAQAVVLGNRISGEWPGRDPGITIYLAGEISRSGEVAIHMHSKRADGSSFALSDLIGTVHDGRIDAKGSFRDGRGVTLNWSKN
Ga0210385_112282721	3300021402	Soil	PEAGQVKPQPNSVGGATAAGTPGDDPSGVYRGQMCYAAGGATEPAHCFAAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0210389_114754641	3300021404	Soil	TEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGRVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0210390_110564572	3300021474	Soil	PEAGQVKPQPDSVSGATAAGTPGDDPSGVYRGQMCYAAGGATEPAHCFAAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0242654_103344151	3300022726	Soil	SVSGATAAGTPGDDPSGVYRGQMCYAAGGATEPAHCFAAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0208098_10077981	3300027172	Forest Soil	PGDHPSGVYRGQMCYAAGGATDPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0208097_10110823	3300027173	Forest Soil	DRSGVYRGQMCYAAAGATEPAHCFEAQGVVLGDRITGEWPGREPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0209656_102029921	3300027812	Bog Forest Soil	AATPGDDRSGVYRGQMCYAAGGVTEPANCFEAQGVVLGDRITGEWPGREPGVTLYLAGEISRAGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0209380_108417141	3300027889	Soil	KPQPDSVRGATAAGTPGDDPSGVYRGQMCYAAGGATEPAHCFAAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0308309_105297142	3300028906	Soil	PDSVSGATAAGTPGDDPSGVYRGQMCYAAGGATEPAHCFAAQAVVLDNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0222749_106537201	3300029636	Soil	APEAGQVKPQSDQVSDPTAAPTPGDDPSGGYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPDVTIYLAGEISRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0170834_1061299302	3300031057	Forest Soil	EALAAPEAGQVKSQPDSVSGATVAGTPGDDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFHDGRGVTLNWSKN
Ga0170822_118460531	3300031122	Forest Soil	EALAAPEAGQVRPQPDSVSGATAAGTPGDDPSGVYRGQMCYAAGGATEPAHCFAAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDAKGSFHDGRGVTLNWSKN
Ga0170820_109046051	3300031446	Forest Soil	RKMTDAEALAAPEAGQVKPQSDQVSGLTAAAAPGDDPSGVYRGQMCYATGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLDWSKK
Ga0170819_131207702	3300031469	Forest Soil	EALAAPEAGQVKPQSDQVSGLTAAATPGDDPSGVYRGQMCYGAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFHDGRGVTLNWSKN
Ga0170818_1066965701	3300031474	Forest Soil	VSDLTAAPTPGDHPSGVYRGQMCYATGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEAAIHMHSKRADGSSFAVSDLIGTVRDGRVDAKGSFRDGRGVTLDWSKK
Ga0318516_101744091	3300031543	Soil	MRGPTAAATPGDDPSGVYRGQMCYPAGSATEPAHCFETQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGDVAIHMHSKRADGSSFAVSDLIGTVRNGRIDAKGSFHDGRGVTLNWSKN
Ga0318534_103873712	3300031544	Soil	AGGATEPAHCFEVQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDANGSCFRDGRGVTLNWSKN
Ga0318541_102901722	3300031545	Soil	AATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSKN
Ga0318538_104007042	3300031546	Soil	GDDPSGVYRGQMCYAAGAATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGDISQAGQVAIHMHSKRADGSSFAISDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318571_102608341	3300031549	Soil	GQVKPQPDSVSGQSAAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318528_105877231	3300031561	Soil	VKPQPDSVSGQSGAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSKN
Ga0318542_101628861	3300031668	Soil	GPTAAATPGDDPSGVYRGQMCYPAGSATEPAHCFETQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGDVAIHMHSKRADGSSFAVSDLIGTVRNGRIDAKGSFHDGRGVTLNWSKN
Ga0318542_101792041	3300031668	Soil	VSGQSGAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSKN
Ga0310686_1028637172	3300031708	Soil	LASPRSPSYAAGGATEPAHYFEAQAIVLGNRRSGEWPGRDPGVTIYLGGEISRSGEVAIHMHSTRADGSSFAVSDLIGTVHAGRIDAKGTFHDGRGVTLNWSKN
Ga0318496_100406181	3300031713	Soil	DDPSGVYRGQMCYAAGAATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGDISQAGQVAIHMHSKRADGSSFAISDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0307474_108572932	3300031718	Hardwood Forest Soil	MCDAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFHDGRGVTLNWSKN
Ga0318500_106465722	3300031724	Soil	AEALPAPGAGQVKPQPDPVSGATAAPTPGEDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLTGEVSRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318502_107473811	3300031747	Soil	VSGQSAAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318537_100141851	3300031763	Soil	GATEPAHCFEAQAVVLRNQISGEWPGRVRGVTIYLGGQISQSGEVAIHMHSKRADGSRFAVSDLSGTLHDGRIDATGSFRNGRSVSLNWRKN
Ga0318537_100914501	3300031763	Soil	GQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYITGEVSRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318554_104974101	3300031765	Soil	QPSSVSGATTAGTPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDANGSCFRDGRGVTLNWSKN
Ga0318526_102890041	3300031769	Soil	TTAGTPGDDLSGVYRGQMCYAASGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDMIGTVHDGRIDAKGSFRDGRGVTLNWSKN
Ga0318546_109533201	3300031771	Soil	AAEDTSGLYRGQICYGAGGATEPAHCFEAQAVVLRNQISGEWPGRVRDVTIYLGGQISQSGEVAIHMHSKRADGSRFAVSDLIGTLHDGRIDATGRFRDGRSITLNWRKD
Ga0318543_105240462	3300031777	Soil	GGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318503_101648221	3300031794	Soil	VSGQSGAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSK
Ga0318523_101802401	3300031798	Soil	VYRGQMCYAAGGATEPARCFEAQAVVLGNRISGEWPGRDPGVTIYLGGEISRTGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKK
Ga0318497_101168491	3300031805	Soil	VYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318568_107762352	3300031819	Soil	AEALAAPEAGQVKPQPDSVSGQSGAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSKN
Ga0310917_1000611313	3300031833	Soil	ESGQVKLQSDQVSGPTAAATPGDDPSGVYRGQMCYAAGAATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGDISQAGQVAIHMHSKRADGSSFAISDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0310917_110685961	3300031833	Soil	LGANRKTAAAEALAAPEAGQVKPQPDSVSGQSGAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSKN
Ga0310917_111889851	3300031833	Soil	ATEPAHCFEAQAVVLRNQISGEWPGRVRDVTIYLGGQISQSGEVAIHMHSKRADGSRFAVSDLIGTLHDGRIDATGRFRDGRSITLNWRKD
Ga0318511_102659491	3300031845	Soil	TPGDDPSGVYRGQMCYAAGGATEPAHCFEVQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDANGSCFRDGRGVTLNWSKN
Ga0318511_104382242	3300031845	Soil	RGQMCYAAGAATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGDISQAGQVAIHMHSKRADGSSFAISDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0306919_100437621	3300031879	Soil	ANRKTAAAEALAAPEAGQVKPQPDSVSGQSAAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318544_100072984	3300031880	Soil	TPGEDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLTGEVSRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318522_100302213	3300031894	Soil	VYRGQMCYAAGGATEPAHCFEVQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDANGSCFRDGRGVTLNWSKN
Ga0318520_105704661	3300031897	Soil	GDDSSGVYRGQMCYAAGGATEPAHCFEVQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDANGSCFRDGRGVTLNWSKN
Ga0306923_103818231	3300031910	Soil	AANPGAAEDTSGLYRGQICYGAGGATEPAHCFEAQAVVLRNQISGEWPGRVRDVTIYLGGQISQSGEVAIHMHSKRADGSRFAVSDLIGTLHDGRIDATGRFRDGRSITLNWRKD
Ga0306923_113025402	3300031910	Soil	QRDPVSGATAAATPGEDPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYITGEVSRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0306923_115209191	3300031910	Soil	ATEPAHCFETQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGDVAIHMHSKRADGSSFAVSDLIGTVRNGRIDAKGSFHDGRGVTLNWSKN
Ga0306921_106099273	3300031912	Soil	GQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLTGEVSRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0306921_123457981	3300031912	Soil	QMCYAAGGATEPAHCFEAPAVVLGDRISGEWPGRDPGVTIHLAGEISRAGEVAIHMHSRRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0306921_126027591	3300031912	Soil	YAASGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDMIGTVHDGRIDAKGSFRDGRGVTLSWSKN
Ga0310910_106959481	3300031946	Soil	AEALAAPEAGQVKPQPDSVSGQSGAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0306926_114842411	3300031954	Soil	TAPSAHRGNPGAAEDTSGLYRGQICYGAGGATEPAHCFEAQAVVLRNQISGEWPGRVRDVTIYLGGQISQSGEVAIHMHSKRADGSRFAVSDLIGTLRDGRIDATGRFRDGRSITLNWRK
Ga0318507_102188901	3300032025	Soil	SGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0310911_103397153	3300032035	Soil	AAPEAGQVKPQPDSVSGQSAAAPPGDDSSAVYRGQMCYAAGRATEPAHCFEAQAVVLGNRISGEWPGHDPGVTIYLEGKISRSGEVVIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318545_100895681	3300032042	Soil	GANRKTAAAEALAAPEAGQVKPQPDSVSGQSGAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318545_101774902	3300032042	Soil	SSGVYRGQMCYAAGGATEPAHCFEVQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDANGSCFRDGRGVTLNWSKN
Ga0318556_101451191	3300032043	Soil	DSVSGQSAAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSK
Ga0318532_100351723	3300032051	Soil	AAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318533_103781981	3300032059	Soil	CYAAGRATEPAHCFEAQAVVLGNRISGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSKN
Ga0318533_108899371	3300032059	Soil	DPSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYITGEVSRAGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318505_100433701	3300032060	Soil	DQVSGPTAAATPGDDPSGVYRGQMCYAAGAATEPAHCFEAQAVVLGNRISGEWPGRDPGVTIYLAGDISQAGQVAIHMHSKRADGSSFAISDLIGTVRDGRIDAKGSFRDGRGVTLNWSK
Ga0318553_103894121	3300032068	Soil	GDDVSGLYRGQMCYAAGGATEPAHCFEAQAVVLGNRISGEWPGRNPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0306924_103360751	3300032076	Soil	QMCSAAGGATEPAHCFEAPAVVLGDRISGEWPGRDPGVTIHLAGEISRAGEVAIHMHSRRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318577_101363861	3300032091	Soil	RGQICYGAGGATEPAHCFEAQAVVLRNQISGEWPGRVRGVTIYLGGQISQSGEVAIHMHSKRADGSSFAVSDLIGTLHDGRIDATGSFRNGRSVSLNWRKN
Ga0318577_101568554	3300032091	Soil	GQMCYAAGRATEPAHCFEAQAVVLGNRISGEWPGHDPGVTIYLEGKISRSGEVVIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0318540_103944881	3300032094	Soil	PEAGQVKPQPDSVSGQSAAATPGDDSSGVYRGQMCYAAGGATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGSFRDGRGVTLNWSKN
Ga0307471_1037146201	3300032180	Hardwood Forest Soil	ATPGDDRSGIYRGQMCYAAGGATEPAHCFEAQGVVLGDRITGEWPGREPGVTIYLAGEISRAGEVAMHMHSKRADGSSFAVCDLIGTVRDGRIDAKGSFRDGRGVSLNWSKN
Ga0310914_111647601	3300033289	Soil	DQAGGATATAPSADDRSGVYRGQLCYAAGGATEPAHCFGAQGVVLGDRITGEWPGREPGVTIYLAGEISQAGEVAIHMHSKKADGSSFAVCDLIGTVRNGRIDAKGGFRDGRGVTLNWSK
Ga0318519_107170941	3300033290	Soil	CYAAGGATEPAHCFEVQAVVLGNRISGEWPGRDPGVTIYLAGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVHDGRIDANGSCFRDGRGVTLNWSKN
Ga0318519_107727012	3300033290	Soil	GATEPAHCFEAQAVVLGNRVSGEWPGHDPGVTIYLEGEISRSGEVAIHMHSKRADGSSFAVSDLIGTVRDGRIDAKGRFRDGRGVTLNWSKN
Ga0318519_108986011	3300033290	Soil	YPAGSATEPAHCFETQAVVLGNRISGEWPGRDPGVTIYLAGEISRAGDVAIHMHSKRADGSSFAVSDLIGTVRNGRIDAKGSFHDGRGVTLNWSKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094320

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences