Metagenome / Metatranscriptome Family F094265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094265
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	48 residues
Representative Sequence	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAEQ
Number of Associated Samples	79
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.95 %
% of genes near scaffold ends (potentially truncated)	92.45 %
% of genes from short scaffolds (< 2000 bps)	81.13 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.264 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.774 % of family members)
Environment Ontology (ENVO)	Unclassified (66.038 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (54.717 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.96% β-sheet: 17.39% Coil/Unstructured: 45.65%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00579	tRNA-synt_1b	51.89
PF04978	DUF664	4.72
PF02397	Bac_transf	1.89
PF04185	Phosphoesterase	1.89
PF01738	DLH	1.89
PF01061	ABC2_membrane	0.94
PF07992	Pyr_redox_2	0.94
PF07730	HisKA_3	0.94
PF01152	Bac_globin	0.94
PF00196	GerE	0.94
PF10099	RskA	0.94
PF00230	MIP	0.94
PF06736	TMEM175	0.94
PF01047	MarR	0.94
PF13556	HTH_30	0.94
PF13490	zf-HC2	0.94
PF04679	DNA_ligase_A_C	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	51.89
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	51.89
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	1.89
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.89
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.94
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.94
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.94
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.94
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.94
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.94
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.94
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.26 %
Unclassified	root	N/A	37.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.26 %
Unclassified	root	N/A	37.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.26 %
Unclassified	root	N/A	37.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	4.72 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	4.72 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.83 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.89 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.74 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.89 %
Micromonospora sp. H61	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. H61	0.94 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101479751	Not Available	555	Open in IMG/M
3300005176\|Ga0066679_10345458	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300005363\|Ga0008090_15651704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300005468\|Ga0070707_101515318	Not Available	637	Open in IMG/M
3300005471\|Ga0070698_100027681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5893	Open in IMG/M
3300005471\|Ga0070698_100233253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1773	Open in IMG/M
3300005537\|Ga0070730_10733585	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005554\|Ga0066661_10504385	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300005764\|Ga0066903_106965030	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300006173\|Ga0070716_101443023	Not Available	561	Open in IMG/M
3300006804\|Ga0079221_10575408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	752	Open in IMG/M
3300006806\|Ga0079220_10135618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1336	Open in IMG/M
3300006904\|Ga0075424_100742109	Not Available	1048	Open in IMG/M
3300006954\|Ga0079219_11435906	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300009143\|Ga0099792_10276908	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300010048\|Ga0126373_10604895	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300010376\|Ga0126381_101009277	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300010398\|Ga0126383_10736660	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300010398\|Ga0126383_12868265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. H61	563	Open in IMG/M
3300011271\|Ga0137393_10661816	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300015242\|Ga0137412_11053038	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300016387\|Ga0182040_10255313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300016387\|Ga0182040_10378452	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300016387\|Ga0182040_11474260	Not Available	577	Open in IMG/M
3300016404\|Ga0182037_10919154	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300016404\|Ga0182037_11770201	Not Available	551	Open in IMG/M
3300016445\|Ga0182038_10412558	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300017947\|Ga0187785_10581229	Not Available	572	Open in IMG/M
3300021560\|Ga0126371_10424567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300021560\|Ga0126371_11273308	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300021560\|Ga0126371_12958420	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025922\|Ga0207646_11229480	Not Available	656	Open in IMG/M
3300025929\|Ga0207664_10481844	Not Available	1110	Open in IMG/M
3300026319\|Ga0209647_1095734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1427	Open in IMG/M
3300027725\|Ga0209178_1284056	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300027857\|Ga0209166_10471058	Not Available	647	Open in IMG/M
3300027874\|Ga0209465_10152820	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300027874\|Ga0209465_10207336	Not Available	978	Open in IMG/M
3300031543\|Ga0318516_10171383	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300031544\|Ga0318534_10357646	Not Available	840	Open in IMG/M
3300031544\|Ga0318534_10653867	Not Available	595	Open in IMG/M
3300031564\|Ga0318573_10707775	Not Available	541	Open in IMG/M
3300031640\|Ga0318555_10772909	Not Available	518	Open in IMG/M
3300031668\|Ga0318542_10020385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2714	Open in IMG/M
3300031713\|Ga0318496_10054418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2077	Open in IMG/M
3300031747\|Ga0318502_10155872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1305	Open in IMG/M
3300031748\|Ga0318492_10023879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2690	Open in IMG/M
3300031751\|Ga0318494_10416267	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031764\|Ga0318535_10415543	Not Available	600	Open in IMG/M
3300031765\|Ga0318554_10013754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4091	Open in IMG/M
3300031768\|Ga0318509_10199002	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300031768\|Ga0318509_10804952	Not Available	520	Open in IMG/M
3300031769\|Ga0318526_10309669	Not Available	646	Open in IMG/M
3300031770\|Ga0318521_10649401	Not Available	639	Open in IMG/M
3300031771\|Ga0318546_10722082	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300031778\|Ga0318498_10440590	Not Available	577	Open in IMG/M
3300031781\|Ga0318547_10239210	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031782\|Ga0318552_10004308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	5459	Open in IMG/M
3300031792\|Ga0318529_10299141	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300031793\|Ga0318548_10177139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1044	Open in IMG/M
3300031793\|Ga0318548_10296169	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031793\|Ga0318548_10473882	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031798\|Ga0318523_10060548	Not Available	1800	Open in IMG/M
3300031798\|Ga0318523_10288702	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031799\|Ga0318565_10062722	Not Available	1744	Open in IMG/M
3300031819\|Ga0318568_10016024	Not Available	3978	Open in IMG/M
3300031831\|Ga0318564_10001245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8362	Open in IMG/M
3300031831\|Ga0318564_10157502	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300031831\|Ga0318564_10308433	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031832\|Ga0318499_10342156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	575	Open in IMG/M
3300031860\|Ga0318495_10325297	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031879\|Ga0306919_11061043	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031893\|Ga0318536_10710125	Not Available	501	Open in IMG/M
3300031894\|Ga0318522_10194578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300031896\|Ga0318551_10306014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300031897\|Ga0318520_10022261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3044	Open in IMG/M
3300031897\|Ga0318520_10313729	Not Available	947	Open in IMG/M
3300031910\|Ga0306923_10213624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	2206	Open in IMG/M
3300031945\|Ga0310913_10119516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1798	Open in IMG/M
3300031946\|Ga0310910_11554108	Not Available	507	Open in IMG/M
3300031947\|Ga0310909_10109779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2228	Open in IMG/M
3300032008\|Ga0318562_10424987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	772	Open in IMG/M
3300032009\|Ga0318563_10015589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3642	Open in IMG/M
3300032052\|Ga0318506_10536481	Not Available	518	Open in IMG/M
3300032054\|Ga0318570_10554922	Not Available	524	Open in IMG/M
3300032055\|Ga0318575_10309083	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300032063\|Ga0318504_10419493	Not Available	638	Open in IMG/M
3300032063\|Ga0318504_10621655	Not Available	519	Open in IMG/M
3300032066\|Ga0318514_10064469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1800	Open in IMG/M
3300032076\|Ga0306924_10290713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1876	Open in IMG/M
3300032076\|Ga0306924_11367445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	757	Open in IMG/M
3300032089\|Ga0318525_10011662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3989	Open in IMG/M
3300032089\|Ga0318525_10233706	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300032205\|Ga0307472_102068197	Not Available	572	Open in IMG/M
3300032261\|Ga0306920_101425504	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300032261\|Ga0306920_103404835	Not Available	590	Open in IMG/M
3300032261\|Ga0306920_103819796	Not Available	550	Open in IMG/M
3300033289\|Ga0310914_10421616	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300033290\|Ga0318519_10065924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1863	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.06%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.62%
Loam	Environmental → Terrestrial → Soil → Loam	8.49%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.66%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.83%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.83%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1014797511	3300000364	Soil	MKYALLIYAAPGASEGVQPADDGVINGWLDYTVAMKESG
Ga0066679_103454581	3300005176	Soil	MKYALLIYAVPGASDNPGPAPEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTIR
Ga0008090_156517042	3300005363	Tropical Rainforest Soil	MKYALLIYAVPGASENPGPAPVGVIEDWLDYTAAIKEAGVLLGAEQLTW
Ga0070707_1015153181	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEDRVKYALLIYATPGAAEGVRPADDGVIDSWLDYTAALKESG
Ga0070698_1000276816	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKYALLIYTTPGAADGAPPAPADDGVITSWLDYTAAAKEAGVLL
Ga0070698_1002332533	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKYALLIYAVPGAGENPGPAPEGVVEDWLDYTAAIKEAGVLLGAEQLTWPDT
Ga0070730_107335852	3300005537	Surface Soil	MKYALLIYAVPGASENPAPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTVRL
Ga0066661_105043851	3300005554	Soil	MKYALLIYAVPGASDNPGPAAEGVIDDWLDYTAAIKEAGVLLA
Ga0066903_1069650301	3300005764	Tropical Forest Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAG
Ga0070716_1014430231	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTVR
Ga0079221_105754082	3300006804	Agricultural Soil	MKYALLIYAVPGASENPGPAPAGVIEDWLDYTAAIKEAGVLLGAEQLTWP
Ga0079220_101356182	3300006806	Agricultural Soil	MKYALLIYAVPGASEHPGPAAEWVIDDWHDYTAAIKEAGVLLGAEQLTWPDTATTVRLSEGE
Ga0075424_1007421091	3300006904	Populus Rhizosphere	MKYALLIYAAPGASEGVQPADDGVINGWLDYTVAMKESGS
Ga0079219_114359063	3300006954	Agricultural Soil	MKYALLIYAVPGASENPGPVPEGVIEDWLDYTAAI
Ga0099792_102769081	3300009143	Vadose Zone Soil	MKYALLIYAVPGASENPGPAPAGVIEGWLDYTAAIKEAGVLLGAEQLTWPDTATTVRL
Ga0126373_106048952	3300010048	Tropical Forest Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTVRLSE
Ga0126373_122397642	3300010048	Tropical Forest Soil	MKYALLIYATPGAAGTAESQQGDGVFDSWLDYTIAIRES
Ga0126381_1010092771	3300010376	Tropical Forest Soil	MKYALLIYAVPGASENPGPAPAGVIEDWLDYTAAIKEAGMLLGAEQLTWPD
Ga0126381_1039403591	3300010376	Tropical Forest Soil	MKYALLIYSMPEAIRTAEPQQGDGVFDSWLDYTIAIRESG
Ga0126383_107366601	3300010398	Tropical Forest Soil	MKYALLIYAVPGAGENPGPAPAGVIGDWLDYTAAIKEAGMLLGAEQLTWPDTATTVRLADGE
Ga0126383_128682652	3300010398	Tropical Forest Soil	MKYALLIYATPGAAEGASPASADDGVSNSWLDYTAA
Ga0137393_106618161	3300011271	Vadose Zone Soil	MKYALLIYAVPGASENPGPAVEGVIEDWLDYTAAIKEAGVLLGAEQLT
Ga0137412_110530381	3300015242	Vadose Zone Soil	MKYALLIYAVPGASENPGPAIEGVIEDWLDYTAAIKEAG
Ga0182040_102553133	3300016387	Soil	VKYALLIYATPGAAERVRPADDGVIDSWLDYTAALKESGSLL
Ga0182040_103784522	3300016387	Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDT
Ga0182040_114742602	3300016387	Soil	MKYALLIYTVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPD
Ga0182037_109191542	3300016404	Soil	MKYALLIYAVPGASENPGPVPAGVIGDWLDYTAAIKEAGMLLGAEQLTW
Ga0182037_117702012	3300016404	Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEA
Ga0182038_104125581	3300016445	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAEQLTWPDTATTIRL
Ga0187785_105812292	3300017947	Tropical Peatland	MKYALLIYAVPGASENPGPAAEGVIEDWLDYTAAIKEAGVLRGAEQLTWADTATT
Ga0126371_100330686	3300021560	Tropical Forest Soil	MKYALLIYAMPDPAEAGEPQPGEGVIDSWLDYTIALKESG
Ga0126371_104245672	3300021560	Tropical Forest Soil	MKYALLIYAAPGAADGVRPADDGVIDSWLDYTAALKECGSLLAAEQLLTWRRPPA
Ga0126371_112733082	3300021560	Tropical Forest Soil	MKYALLIYAVPGASENPGPAPAGVIEDWLDYTAAIKEAGMLLGAEQLTWPDTATT
Ga0126371_129584201	3300021560	Tropical Forest Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKE
Ga0207646_112294802	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VKYALLIYATPGAAEGVRPADDGVIDSWLDYTAALKESGSLLA
Ga0207664_104818441	3300025929	Agricultural Soil	MKYALLIYAAPGASEGVQPADDGVINGWLDYTVAMKESGSLLGAEQLAP
Ga0209647_10957343	3300026319	Grasslands Soil	MKYALLIYGAPGAANGVQPAAAPADDGVIDSWIDYTAAMKESGALLA
Ga0209178_12840561	3300027725	Agricultural Soil	MKYALLIYAVPGASENPGPAPAGVIEDWLDYTAAIKEAGVLL
Ga0209166_104710582	3300027857	Surface Soil	MKYALLIYAVPGASENPAPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTVRLND
Ga0209465_101528202	3300027874	Tropical Forest Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAI
Ga0209465_102073363	3300027874	Tropical Forest Soil	MKYALLIYATPGAAEGAPAAPADDGVINSWLDYTAA
Ga0318516_101713832	3300031543	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAG
Ga0318534_103576462	3300031544	Soil	MKYALLIYATPGAAEGAQPADDGVIDSWLDYTAAMT
Ga0318534_106538671	3300031544	Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTVRLS
Ga0318573_107077751	3300031564	Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTAT
Ga0318555_107729092	3300031640	Soil	MEDRVKYALLIYAIPGAGEGVRPADDGVIDSWLDY
Ga0318542_100203851	3300031668	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAEQLTWPDTA
Ga0318496_100544183	3300031713	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAEQLTWPDTATTIRLA
Ga0318502_101558723	3300031747	Soil	MKYALLIYATPGAAEGVQPADDGVIDSWLDYTAAMKESGVLLG
Ga0318492_100238791	3300031748	Soil	MKYALLIYAVPGASENPGPAPAGVIEDWLDYTVAIKEAGVLLGAEQLTWPDTATTIRLAD
Ga0318494_104162671	3300031751	Soil	MKYALLIYAVPGASENPGPAPEGVIEGWLDYTAAIKDAGVLL
Ga0318535_104155432	3300031764	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKE
Ga0318554_100137545	3300031765	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAEQLTWPDTATTVR
Ga0318509_101990021	3300031768	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVL
Ga0318509_108049521	3300031768	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGERRGAEPRTRAAT
Ga0318526_101907641	3300031769	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAIKEAGVGGGGGRRPRRGPPPPP
Ga0318526_103096692	3300031769	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGELRGAEQRTGADTATT
Ga0318521_106494011	3300031770	Soil	MKYALLIYTVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTVRMAE
Ga0318546_107220821	3300031771	Soil	MKYALLIYTVPGASENPGPAGEGVIDDWLDYTAAIKEAGVLLGAEQLTW
Ga0318498_104405901	3300031778	Soil	MKYALLIYTVPGASENPGPAGEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTAT
Ga0318547_102392102	3300031781	Soil	MKYALLIYAVPGASENPGPAAEGVIEGWLDYTAAIKDAGVLLGA
Ga0318552_100043087	3300031782	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAIKEAGVRRGAEPR
Ga0318529_102991412	3300031792	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAEQLTWPD
Ga0318548_101771391	3300031793	Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATPVRLSEGERLLTDG
Ga0318548_102961691	3300031793	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAI
Ga0318548_104738822	3300031793	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVL
Ga0318523_100605483	3300031798	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAEQLTWPDTATTIRLAD
Ga0318523_102887022	3300031798	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAEQH
Ga0318565_100627222	3300031799	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGELLGAEQLTG
Ga0318568_100160245	3300031819	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAEQLTWPDTATTVRLS
Ga0318564_100012451	3300031831	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAIMEAGVLLGAEQLTWPDTATTVR
Ga0318564_101575021	3300031831	Soil	VKYALLIYATPGAAEGVRPADDGVIDSWLDYTAALKESGSLLAA
Ga0318564_103084331	3300031831	Soil	MKYALLIYTVPGASENPGPAGEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATT
Ga0318499_103421562	3300031832	Soil	MKYALLIYATPGAAEGVQPADDGVIDSWLDYTAALKESGVG
Ga0318495_103252971	3300031860	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAIKEAGVLLGAEQLT
Ga0306919_110610431	3300031879	Soil	MKYALLIYAVPGASENPGPVPAGVIGDWLDYTAAIKEAGM
Ga0318536_107101251	3300031893	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAEQLTWPDTATTIRLAEGERLL
Ga0318522_101945782	3300031894	Soil	MEVRVKYALLIYATPGAAEGVRPADDGVIDSWLDYTA
Ga0318551_101822251	3300031896	Soil	MKYALLIYAVPGAGENPGPAPAGVIESWLDYTAAIKEAGVGRGAAPLPRPP
Ga0318551_103060142	3300031896	Soil	MKYALLIYATPGAAEGVQPADDGVIDSWLDYTAAMK
Ga0318520_100222614	3300031897	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAEHHTRPD
Ga0318520_103137291	3300031897	Soil	MKYALLLYAAPGAAQGVQPADDGVMNSWLDYTAAMKESGVLLAA
Ga0306923_102136243	3300031910	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAQQRTRPDTAPTVRLSDRARRL
Ga0310913_101195163	3300031945	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGA
Ga0310910_115541081	3300031946	Soil	VKYALLIYATPGAAEGVRPADDGVIDSWLDYTAALKESGS
Ga0310909_101097793	3300031947	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAIKEAGVLLGAEQLTWP
Ga0318562_104249871	3300032008	Soil	MKYALLIYATPGAAEGVQPADDGVIDSWLDYTAALK
Ga0318563_100155895	3300032009	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAEQHAC
Ga0318506_105364811	3300032052	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAEQ
Ga0318570_105549221	3300032054	Soil	MKYALLIYAVPGASENPGPAAEGVIEDWLDYTAAIKDAGVLLGAEQLTWPDTA
Ga0318575_103090831	3300032055	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGELLGAE
Ga0318504_104194932	3300032063	Soil	MEVRVKYALLIYATPGAAEGVRPADDGVIDSWLDYTAALK
Ga0318504_106216551	3300032063	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAIKEAGVGRGGGQLTRPGPAP
Ga0318513_102866271	3300032065	Soil	MKYALLIYAVPGAGDNPGPAPAGVIESWLDYTAAIKEAGVGGGGGEDHRR
Ga0318514_100644693	3300032066	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWHDYTAAIK
Ga0318514_101420281	3300032066	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVRGGAAARTR
Ga0306924_102907133	3300032076	Soil	MKYALLIYTVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWP
Ga0306924_113674451	3300032076	Soil	MKYALLIYATPGAAEGVQPADDGVIDSWLDYTAALKESGVLL
Ga0318525_100116621	3300032089	Soil	MKYALLIYAVPGASENPGPAPAGVIESWLDYTAAIKEAGVLLGAEQLTWPDTATTVRLSD
Ga0318525_102337062	3300032089	Soil	MKYALLIYAVPGAGENPGPAPAGVIEDWLDYTAAIKEAGMLLGAEQLTYPDTAT
Ga0307472_1020681971	3300032205	Hardwood Forest Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATT
Ga0306920_1014255042	3300032261	Soil	MKYALLIYAVPGASENPGPAAEGVIEDWLDYTAAIKDAGVLLGAEQL
Ga0306920_1034048352	3300032261	Soil	MKYALLIYTVPGASENPGPAAEGVIDDWLDYTAAIKEAGVL
Ga0306920_1038197961	3300032261	Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLT
Ga0310914_104216161	3300033289	Soil	MKYALLIYAVPGASENPGPAAEGVIDDWLDYTAAIKEAGVLLGAEQLTWPDTATTVRLA
Ga0318519_100659241	3300033290	Soil	MKYALLIYAVPGASENPGPAPEGVIEDWLDYTAAIKEAGVLLGAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences