NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F094216

Metagenome Family F094216

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094216
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 112 residues
Representative Sequence MRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Number of Associated Samples 90
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.30 %
% of genes near scaffold ends (potentially truncated) 33.96 %
% of genes from short scaffolds (< 2000 bps) 71.70 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (74.528 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(13.207 % of family members)
Environment Ontology (ENVO) Unclassified
(49.057 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(83.962 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 9.72%    β-sheet: 34.03%    Coil/Unstructured: 56.25%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF13376OmdA 44.34
PF02368Big_2 7.55
PF02687FtsX 6.60
PF03704BTAD 3.77
PF10012DUF2255 3.77
PF12704MacB_PCD 3.77
PF13176TPR_7 1.89
PF00342PGI 0.94
PF03795YCII 0.94
PF01979Amidohydro_1 0.94
PF13936HTH_38 0.94
PF08281Sigma70_r4_2 0.94
PF07638Sigma70_ECF 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG3629DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domainTranscription [K] 3.77
COG3947Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domainsTranscription [K] 3.77
COG0166Glucose-6-phosphate isomeraseCarbohydrate transport and metabolism [G] 0.94
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.94
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.53 %
UnclassifiedrootN/A25.47 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_103429283Not Available839Open in IMG/M
3300003319|soilL2_10143993All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300003324|soilH2_10199888All Organisms → cellular organisms → Bacteria3215Open in IMG/M
3300003324|soilH2_10295422All Organisms → cellular organisms → Bacteria1603Open in IMG/M
3300005293|Ga0065715_10449428All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300005329|Ga0070683_100070580All Organisms → cellular organisms → Bacteria → Proteobacteria3258Open in IMG/M
3300005332|Ga0066388_100377983All Organisms → cellular organisms → Bacteria2063Open in IMG/M
3300005343|Ga0070687_100004553All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5539Open in IMG/M
3300005345|Ga0070692_10354521All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300005347|Ga0070668_100007278All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis8210Open in IMG/M
3300005355|Ga0070671_100188130All Organisms → cellular organisms → Bacteria1749Open in IMG/M
3300005356|Ga0070674_100759724All Organisms → cellular organisms → Bacteria → Proteobacteria834Open in IMG/M
3300005367|Ga0070667_100015565All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6288Open in IMG/M
3300005457|Ga0070662_100472539All Organisms → cellular organisms → Bacteria → Proteobacteria1043Open in IMG/M
3300005459|Ga0068867_100052598All Organisms → cellular organisms → Bacteria3006Open in IMG/M
3300005543|Ga0070672_100540429All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300005545|Ga0070695_100926183All Organisms → cellular organisms → Bacteria → Proteobacteria705Open in IMG/M
3300005546|Ga0070696_100620299All Organisms → cellular organisms → Bacteria → Proteobacteria874Open in IMG/M
3300005563|Ga0068855_101068691All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300005615|Ga0070702_100909266Not Available690Open in IMG/M
3300005718|Ga0068866_10128243All Organisms → cellular organisms → Bacteria1439Open in IMG/M
3300005834|Ga0068851_10584216All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae → Tatumella → Tatumella ptyseos678Open in IMG/M
3300005834|Ga0068851_10958446All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae → Tatumella → Tatumella ptyseos538Open in IMG/M
3300005842|Ga0068858_102177953Not Available548Open in IMG/M
3300006175|Ga0070712_100283363All Organisms → cellular organisms → Bacteria1335Open in IMG/M
3300006358|Ga0068871_100364333All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300006755|Ga0079222_11961603Not Available574Open in IMG/M
3300006844|Ga0075428_100034111All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5615Open in IMG/M
3300006844|Ga0075428_100050165All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium4578Open in IMG/M
3300006845|Ga0075421_100009871All Organisms → cellular organisms → Bacteria11777Open in IMG/M
3300006847|Ga0075431_100597370All Organisms → cellular organisms → Bacteria → Proteobacteria1088Open in IMG/M
3300006852|Ga0075433_10099171All Organisms → cellular organisms → Bacteria → Proteobacteria2579Open in IMG/M
3300006880|Ga0075429_101043934All Organisms → cellular organisms → Bacteria → Proteobacteria714Open in IMG/M
3300006880|Ga0075429_101136036Not Available682Open in IMG/M
3300006881|Ga0068865_100334818All Organisms → cellular organisms → Bacteria1221Open in IMG/M
3300006904|Ga0075424_101811137Not Available646Open in IMG/M
3300009094|Ga0111539_10152924All Organisms → cellular organisms → Bacteria2701Open in IMG/M
3300009098|Ga0105245_10197165All Organisms → cellular organisms → Bacteria1932Open in IMG/M
3300009147|Ga0114129_10655594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1354Open in IMG/M
3300009148|Ga0105243_12449031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium561Open in IMG/M
3300009156|Ga0111538_10093564All Organisms → cellular organisms → Bacteria3821Open in IMG/M
3300009156|Ga0111538_12346086Not Available670Open in IMG/M
3300009176|Ga0105242_10384538All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300009176|Ga0105242_10503811All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300009176|Ga0105242_11332854All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300009553|Ga0105249_10685310Not Available1084Open in IMG/M
3300010375|Ga0105239_10030003All Organisms → cellular organisms → Bacteria5981Open in IMG/M
3300012469|Ga0150984_102853410All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300012509|Ga0157334_1026749Not Available676Open in IMG/M
3300012951|Ga0164300_10175451All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1028Open in IMG/M
3300012955|Ga0164298_10027249All Organisms → cellular organisms → Bacteria2523Open in IMG/M
3300012957|Ga0164303_10158690All Organisms → cellular organisms → Bacteria1207Open in IMG/M
3300012958|Ga0164299_10213102All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300012961|Ga0164302_10199100All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300012971|Ga0126369_11222763Not Available841Open in IMG/M
3300012986|Ga0164304_10108820All Organisms → cellular organisms → Bacteria1668Open in IMG/M
3300013296|Ga0157374_10238538All Organisms → cellular organisms → Bacteria1788Open in IMG/M
3300013297|Ga0157378_10321026All Organisms → cellular organisms → Bacteria1504Open in IMG/M
3300013308|Ga0157375_11388565Not Available827Open in IMG/M
3300015262|Ga0182007_10055029Not Available1308Open in IMG/M
3300015371|Ga0132258_10252167All Organisms → cellular organisms → Bacteria4315Open in IMG/M
3300015371|Ga0132258_11892011All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300015371|Ga0132258_12484111All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300015372|Ga0132256_100066136All Organisms → cellular organisms → Bacteria3411Open in IMG/M
3300015372|Ga0132256_100075888All Organisms → cellular organisms → Bacteria3199Open in IMG/M
3300015372|Ga0132256_100524882All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300015372|Ga0132256_101084858All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300015373|Ga0132257_100063125All Organisms → cellular organisms → Bacteria4165Open in IMG/M
3300015373|Ga0132257_101060078Not Available1022Open in IMG/M
3300015374|Ga0132255_100334197All Organisms → cellular organisms → Bacteria2189Open in IMG/M
3300025321|Ga0207656_10291727Not Available806Open in IMG/M
3300025899|Ga0207642_10041165All Organisms → cellular organisms → Bacteria2021Open in IMG/M
3300025907|Ga0207645_10000373All Organisms → cellular organisms → Bacteria37103Open in IMG/M
3300025911|Ga0207654_10980841All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300025912|Ga0207707_11664975Not Available501Open in IMG/M
3300025913|Ga0207695_11564709Not Available540Open in IMG/M
3300025918|Ga0207662_10006887All Organisms → cellular organisms → Bacteria6159Open in IMG/M
3300025919|Ga0207657_10908664Not Available678Open in IMG/M
3300025919|Ga0207657_11007002Not Available639Open in IMG/M
3300025921|Ga0207652_11152675Not Available676Open in IMG/M
3300025925|Ga0207650_10079583All Organisms → cellular organisms → Bacteria2482Open in IMG/M
3300025927|Ga0207687_10144542All Organisms → cellular organisms → Bacteria1808Open in IMG/M
3300025931|Ga0207644_10536634All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300025932|Ga0207690_10087797All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2189Open in IMG/M
3300025934|Ga0207686_10794695Not Available758Open in IMG/M
3300025935|Ga0207709_11633112Not Available535Open in IMG/M
3300025936|Ga0207670_10882667Not Available748Open in IMG/M
3300025937|Ga0207669_11091473All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300025940|Ga0207691_10001291All Organisms → cellular organisms → Bacteria24984Open in IMG/M
3300025941|Ga0207711_11808956Not Available554Open in IMG/M
3300025944|Ga0207661_10304059All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1430Open in IMG/M
3300025961|Ga0207712_10007111All Organisms → cellular organisms → Bacteria7057Open in IMG/M
3300025981|Ga0207640_10643583All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes902Open in IMG/M
3300025981|Ga0207640_11777893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria557Open in IMG/M
3300026023|Ga0207677_10137737All Organisms → cellular organisms → Bacteria1864Open in IMG/M
3300026035|Ga0207703_12127226Not Available537Open in IMG/M
3300026089|Ga0207648_10087435All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2720Open in IMG/M
3300026118|Ga0207675_102378907Not Available542Open in IMG/M
3300026142|Ga0207698_11869923All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300027909|Ga0209382_10065879All Organisms → cellular organisms → Bacteria4286Open in IMG/M
3300027909|Ga0209382_12181563Not Available525Open in IMG/M
3300028381|Ga0268264_11164188Not Available780Open in IMG/M
3300031547|Ga0310887_10095125All Organisms → cellular organisms → Bacteria1463Open in IMG/M
3300031548|Ga0307408_100011418All Organisms → cellular organisms → Bacteria5869Open in IMG/M
3300031892|Ga0310893_10058355All Organisms → cellular organisms → Bacteria1307Open in IMG/M
3300032013|Ga0310906_10376757All Organisms → cellular organisms → Bacteria931Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.21%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere7.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.60%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.66%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.77%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere3.77%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil2.83%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.83%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.83%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.94%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10342928323300000559SoilMRRFHSAFVAAIALFTSYCVIVDPSCASGGASILVSPTTVIVALGGSFTPKASWCQNGRWNNMNPQWSLGQASDATFISLDPTTGQITGRRAGRATVIATSDGAQGASVTVTVR*
soilL2_1014399323300003319Sugarcane Root And Bulk SoilMRRFPSAFVALPAIVASFTSCVIVDPSCSSGGASIFISPSVVFVAVGQSTTPRASWCRNGRYGDGSPRWSLGSTADANIINLDTSTGEITGRRAGTARVVATSEGVQGGSVSVTVR*
soilH2_1019988823300003324Sugarcane Root And Bulk SoilMRRSLFASVASAVPFAILASTAGCVIVDPSCGGGGASILVTPSVVFVAVGESTTPRASWCRNGRYDNMSPEWSLSSAADGNVISLDATTGRITGRRTGTATVIATSDGVQGARVSVTVR*
soilH2_1029542223300003324Sugarcane Root And Bulk SoilMRRFPSAFLALSTIVASSASCVIVDPDCAGGGASILITPSVVFVAVGESATPRASWCRGGRWNDGDPNWSLGQAADANIISLDATTGRITGRRAGTATVIATSDGVLGSSLSVTVR*
Ga0065715_1044942823300005293Miscanthus RhizosphereCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0070683_10007058043300005329Corn RhizosphereMRRALCNVVASLGLVASSASCVIVDPGCGVGGASILISPTVVFVAVGQSATPRASWCRNGHYDPMSPEWSLGSAADANVIGLDPTTGRITGRRAGTATVIATSQGVGGASVSVTVE*
Ga0066388_10037798333300005332Tropical Forest SoilMRRAFCEIIASLGLVASSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLGSTADRDVVSLDAWTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0070687_10000455343300005343Switchgrass RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR*
Ga0070692_1035452123300005345Corn, Switchgrass And Miscanthus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDIVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0070668_10000727823300005347Switchgrass RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0070671_10018813023300005355Switchgrass RhizosphereMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0070674_10075972423300005356Miscanthus RhizosphereMRRALCDIVASLIIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0070667_10001556553300005367Switchgrass RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR*
Ga0070662_10047253913300005457Corn RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPMSPQWSLGSAADANVIELDPETGRITGRRAGRATVTATSEGVGGASVSVTVE*
Ga0068867_10005259823300005459Miscanthus RhizosphereMRRALCNTIASLGLVASSASCVIVDPGCGVGGASILVSPTVVFVVVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGIEGASVSVTVR*
Ga0070672_10054042923300005543Miscanthus RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPMSPQWSLGSAADANVIELDPETGRITGRRAGRATVTATSEGVGGASVSV
Ga0070695_10092618323300005545Corn, Switchgrass And Miscanthus RhizosphereCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDIVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0070696_10062029923300005546Corn, Switchgrass And Miscanthus RhizosphereMRRALCNTIASLGLVASSASCVIVDPGCGVGGASILVNPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0068855_10106869113300005563Corn RhizosphereLSGGSGSDIQPLLERLSRMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPMSPQWSLGSAADANVIELDPETGRITGRRAGRATVTATSEGVGGASVSVTVE*
Ga0070702_10090926623300005615Corn, Switchgrass And Miscanthus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTV
Ga0068866_1012824333300005718Miscanthus RhizosphereMRRALCNTIASLGLVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0068851_1058421613300005834Corn RhizosphereMRRALSSSIACLAIAALSASCVIVDPGCGAGGAAILVSPTIVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDIVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0068851_1095844613300005834Corn RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGYYDPMSPQWSLGSAADANVIELDPETGRITGRRAGRATVTATSEGVGGAS
Ga0068858_10217795313300005842Switchgrass RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPMSPQWSLGSAADANVIELDPETGRITGRRAG
Ga0070712_10028336313300006175Corn, Switchgrass And Miscanthus RhizosphereMRRAFRDIVASLAIVASSASCVIVDPGCGVGGASILVSPTVVVVAVGQSATPSASWCRNGHYDPVSPQWSLGSAADANVVSLDAATGRITGRRVGTATVIATSQGVGGASVSVTVE*
Ga0068871_10036433313300006358Miscanthus RhizosphereMRRAFCNVVASLGLVASSASCVIVDPGCGVGGASILISPTVVFVTVGQSATPRASWCRNGHYDPMSPEWSLGSAADANIIGLDPTTGRITGRRAGTATVIATSQGVGGASVSVTVE*
Ga0079222_1196160313300006755Agricultural SoilMRHPFFASVVPFAILASTAGCVIVDPSCGGGGASILVTPSVVVVAVGQSTTPRASWCRNGRYDNMSPEWSLSSAADANVISLDPVSGRITGRRAGTATVIARSDGVDGTRVSVTVQ*
Ga0075428_10003411153300006844Populus RhizosphereMRRALVATIASLTVVASSASCVIVDPGCGTGGAAILVSPTVVFVAVGQSATPKASWCRNGRYDPMTPDWSLGSAADANVVSLDPSTGRITGRRAGTATVIATSDGYEGASVSVTVK*
Ga0075428_10005016553300006844Populus RhizosphereMRRAFCDTIASLAIVASSASCVIVDPGCGPGGASILISPTVVFVAVGQSATPKASWCRNGHYDSMTPEWSLSSTADANIVSLDPSTGRITGRRVGTATVIA
Ga0075421_10000987173300006845Populus RhizosphereMRRAFCDTIASLAIVASSASCVIVDPGCGPGGASILISPTVVFVAVGQSATPKASWCRNGHYDSMTPEWSLSSTADANIVSLDPSTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0075431_10059737023300006847Populus RhizosphereALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPISPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0075433_1009917113300006852Populus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPISPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0075429_10104393423300006880Populus RhizosphereDTIASLAIVASSASCVIVDPGCGPGGASILISPTVVFVAVGQSATPKASWCRNGHYDSMTPEWSLSSTADANIVSLDPSTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0075429_10113603623300006880Populus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPISPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVS
Ga0068865_10033481833300006881Miscanthus RhizosphereLSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR*
Ga0075424_10181113713300006904Populus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPISPQWSLASSADGDVVSLDASTGRITGRRAGT
Ga0111539_1015292433300009094Populus RhizosphereMRRALYNTIASFGLVASSASCVIVDPGCGAGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLAATADAEFVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0105245_1019716533300009098Miscanthus RhizosphereLSGGSGSAVQPLIQESSRMRRALSSSIACLAIAALPASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDIVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0114129_1065559413300009147Populus RhizosphereMRRFPSAFVALSAIVASTANCLIVDPSCAGGGASILISPSVVFVSVGGSATPKASWCRNGRYDNMSPRWSLGQASDATIIDLDPTSGEITGRRAGQASVVATYDGVDGSSVSVTVR*
Ga0105243_1244903113300009148Miscanthus RhizosphereLGLVASSASCVIVDPGCGVGGASILVSPTVLFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0111538_1009356453300009156Populus RhizosphereMRRALYNTIASFGLVASTASCVIVDPGCGAGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLAATADAEFVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0111538_1234608613300009156Populus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGV
Ga0105242_1038453823300009176Miscanthus RhizosphereMRRALCDIVASLIIVASSASCVIVDPGCGVGGASILVSPTVLFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0105242_1050381123300009176Miscanthus RhizosphereMRRALCNVVASLGLVASSASCVIVDPGCGVGGASILISPTVVFVTVGQSATPRASWCRNGHYDPMSPEWSLGSAADANIIGLDPTTGRITGRRAGTATVIATSQGVGGASVSVTVE*
Ga0105242_1133285423300009176Miscanthus RhizosphereMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGRYDPMSPQWSLASSADAEVVSLDASTGRITGRRVGTATIIAASDGIEGASVSVTVR*
Ga0105249_1068531023300009553Switchgrass RhizosphereLSGGSGSAVQPLIQESSRMRRALSSSIACLAIAALPASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0105239_1003000323300010375Corn RhizosphereMRRALSSSIACLAIVVLSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR*
Ga0150984_10285341013300012469Avena Fatua RhizosphereALSGIIASLAIALSSASCVIVDPGCGVGGASILVSPSVVFVTVGQSATPKASWCRNGRYDPVSPQWSLASSADAEVVSLDASTGRVTGRRVGTATVIAASDGVEGASLSVTVR*
Ga0157334_102674913300012509SoilMRRTLSSSIARLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVI
Ga0164300_1017545113300012951SoilMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAQVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0164298_1002724923300012955SoilMRRAFRDIVASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0164303_1015869013300012957SoilMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSD
Ga0164299_1021310213300012958SoilMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIA*
Ga0164302_1019910033300012961SoilMRRALFASVVSFAAAASFASCVIVDPGCGPGGASILISPTVVFVAVGQSATPKASWCRNGRYDPMTPQWSLGSAADANVVSLDPSTGRITGRRAGTATVVATSDGLQGASLSVTVR*
Ga0126369_1122276313300012971Tropical Forest SoilMRRAFCDIVAAFGLVASSASCVIVDPGCGVGGASILVSPTLVVVAVGQSATPSASWCRNGHYDPLSPQWTLGSAADANIISLDVATGRITGRRAGTATVIATSPGVGGASVSVTVE*
Ga0164304_1010882033300012986SoilLGLVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAQVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0157374_1023853823300013296Miscanthus RhizosphereMRRAFCKVVVSLGLVASSANCVIVDPGCGVGGASILISPTVVFVAVGQSATPRASWCRNGHYDPMSPEWSLGSAADANVIGLDPTTGRITGRRAGTATVIATSQGVGGASV*
Ga0157378_1032102633300013297Miscanthus RhizosphereMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGIEGASVSVTVR*
Ga0157375_1138856513300013308Miscanthus RhizosphereMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVLFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR*
Ga0182007_1005502923300015262RhizosphereMRRSPFASVASVVPFAILASTAGCVIVDPSCGGGGASILVTPSVVVVAVGQSATPRASWCRDGRYDNMSPEWSLSSASDANIISLDPVSGRITGRRTGSATVIAR
Ga0132258_1025216753300015371Arabidopsis RhizosphereMRRALFASVVSFAAVSSASCVIVDPGCGAGGASILISPTVVFVAVGQSATPKASWCRNGRYDPMTPQWSLASAADANVVSLDPSTGRITGRRAGTATVVATSEGLEGATLSVTVR*
Ga0132258_1189201123300015371Arabidopsis RhizosphereMRRFPSAFLALSTIVASSASCVIVDPNCAGGGASILITPSVVFVAVGESATPRASWCRGGRWNDGDPNWSLGQAADANIISLDAATGRITGRRAGTATVIATSDGVQGASLSVTVR*
Ga0132258_1248411113300015371Arabidopsis RhizosphereMRRAFSDTIASLAIVASSASCVIVDPGCGPGGASILVSPTVVFVAVGQSATPNASWCRNGHYDPITPEWSLSSTADANIVSLDPSTGRITGRRVGTATVIASSDGVEGARVSVTVR*
Ga0132256_10006613633300015372Arabidopsis RhizosphereMRRALFASVVSFAAVSSASCVIVDPGCGAGGASILISPTVVFVAVGQSATPKASWCRNGRYDPMTPQWSLASAADANVVSLDPSTGRITGRRAGTATVVATSEGLEGASLSVTVR*
Ga0132256_10007588833300015372Arabidopsis RhizosphereMRRALSSNIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR*
Ga0132256_10052488233300015372Arabidopsis RhizosphereASLFIVASSASCVIVDPGCGTGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPEWSLSSTADAAIVSLDPSTGRITGRRAGTATVIASSDGVEGASVSVTVR*
Ga0132256_10108485813300015372Arabidopsis RhizosphereMRRFPSAFVALSAIVASTANCVIVDPSCAGGGASILISPSVVFVSVGGSATPKASWCRNGRFDTMSPRWSLGQASDANIIDLDPTSGEITGRRAGQARVVATYDGAEGSSVSVTVR*
Ga0132257_10006312523300015373Arabidopsis RhizosphereMRRALSSNIACLAIVALSANCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR*
Ga0132257_10106007823300015373Arabidopsis RhizosphereMRRAFCDTIASLVIVASSASCVIVDPGCGTGGASILVSPTVVFVAVGQSATPKASWCQNGHYDPMSPEWSLSSTADAAIVSLDPSTGRITSRRAGTATVI
Ga0132255_10033419723300015374Arabidopsis RhizosphereMRRAFCDTIASLVIVASSASCVIVDPGCGTGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPEWSLSSTADAAIVSLDPSTGRITGRRAGTATVIASSDGVEGASVSVTVR*
Ga0207656_1029172713300025321Corn RhizosphereMRRALSSSIACLAIAALSASCVIVDPGCGAGGAAILVSPTIVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDIVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0207642_1004116533300025899Miscanthus RhizosphereMRRALCNSIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR
Ga0207645_10000373113300025907Miscanthus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0207654_1098084123300025911Corn RhizosphereSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR
Ga0207707_1166497513300025912Corn RhizosphereMRRSPFASVASVVPFAILASTAGCVIVDPSCGGGGASILVTPSVVVVAVGQSATPRASWCRDGRYDNMSPEWSLSSASDANIISLDPVSGRITGRRTGSATVIARSEGVEGTRVSVTVQ
Ga0207695_1156470923300025913Corn RhizosphereAIAALPASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0207662_1000688743300025918Switchgrass RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR
Ga0207657_1090866413300025919Corn RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPMSPQWSLGSAADANVIELDPETGRITGRRAGRATVTATS
Ga0207657_1100700213300025919Corn RhizosphereMRRAFCNVVVSLGLVASSASCVIVDPGCGVGGASILVSPTVVFVAVSQSATPRATWCRNGHYDPMSPEWSLGSAADANVIGLDPTTGRITGRRAGTATVIATS
Ga0207652_1115267513300025921Corn RhizosphereMRRAFCNVVASLGLVASSASCVIVDPGCGVGGASILISPTVVFVTVGQSATPRASWCRNGHYDPMSPEWSLGSAADANIIGLDPTTGRITGRRAGTATVIATSQGVGGASVSVTVE
Ga0207650_1007958333300025925Switchgrass RhizosphereMRRALCNVVASLGLVASSASCVIVDPGCGVGGASILISPTVVFVAVGQSATPRASWCRNGHYDPMSPEWSLGSAADANVIGLDPTTGRITGRRAGTATVIATSQGVGGASVSVTVE
Ga0207687_1014454223300025927Miscanthus RhizosphereMRRALSSSIACLAIAALPASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0207644_1053663413300025931Switchgrass RhizosphereIASLAIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR
Ga0207690_1008779733300025932Corn RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPMSPQWSLGSAADANVIELDPETGRITGRRAGRATVTATSEGVGGASVSVTVE
Ga0207686_1079469523300025934Miscanthus RhizosphereMRRALCDIVASLIIVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR
Ga0207709_1163311213300025935Miscanthus RhizosphereLGLVASSASCVIVDPGCGVGGASILVSPTVLFVAVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR
Ga0207670_1088266723300025936Switchgrass RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDIVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0207669_1109147313300025937Miscanthus RhizosphereVDPGCGVGGASILVSPAVVFVAVGQSATPKASWCRNGRYDPMSPQWSLASSADAEVVSLDASTGRITGRRVGTATVIAASDGIEGASVSVTVR
Ga0207691_1000129123300025940Miscanthus RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR
Ga0207711_1180895613300025941Switchgrass RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPMSPQWSLGSAADANVIELDPETGRITGRRAGRATVTATSEGVGGASV
Ga0207661_1030405933300025944Corn RhizosphereMRRALSSSIACLAIAALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPRWSLASSADGDIVSLDASTGRITGRRAGTATVI
Ga0207712_1000711123300025961Switchgrass RhizosphereMRRALSSSIACLAIAALPASCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0207640_1064358323300025981Corn RhizosphereMRRAFCNVVVSLGLVASSASCVIVDPGCGVGGASILVSPTVVFVAVGQSATPRATWCRNGHYDPMSPEWSLGSAADANVIGLDPTTGRITGRRAGTATVIATSQGVGGAK
Ga0207640_1177789313300025981Corn RhizosphereDPGCGVGGASILVSPAVVFVAVGQSATPKASWCRNGRYDPMSPQWSLASSADAEVVSLDASTGRITGRRVGTATVIAASDGIEGASVSVTVR
Ga0207677_1013773723300026023Miscanthus RhizosphereMRRALCNVVASLGLVASSASCVIVDPGCGVGGASILISPTVVFVAVGQSATPRASWCRNGHYDPMSPEWSLGSAADANIIGLDPTTGRITGRRAGTATVIATSQGVGGASVSVTVE
Ga0207703_1212722613300026035Switchgrass RhizosphereMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIAS
Ga0207648_1008743533300026089Miscanthus RhizosphereMRRALCNTIASLGLVASSASCVIVDPGCGVGGASILVSPTVVFVVVGQSATPKASWCRNGHYDPMSPQWSFASTADAEVVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR
Ga0207675_10237890713300026118Switchgrass RhizosphereMRRALCSSIASLGVVASSASCVIVDPGCGAGGATILVSPTIVFVAVGQSATPRASWCRNGHYDPISPQWSLGSAADANVIELDPETGRITGRRAG
Ga0207698_1186992313300026142Corn RhizosphereIAALSPSCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0209382_1006587913300027909Populus RhizosphereMRRAFCDTIASLAIVASSASCVIVDPGCGPGGASILISPTVVFVAVGQSATPKASWCRNGHYDSMTPEWSLSSTADANIVSLDPSTGRITGRRVGTATVIASSDGVEGASVSVTVR
Ga0209382_1218156313300027909Populus RhizosphereMRRALYNTIASFGLVASSASCVIVDPGCGAGGASILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLAATADAEFVSLDASTGRITGRRVGTATVIASSDGVEGASVSV
Ga0268264_1116418823300028381Switchgrass RhizosphereMRRALSSSIACLAIAALSPSCVIVDPGCGAGGAAILVSPTVVFVAVGQSATPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRAGTATVIASSDGVDGASVSVTVR
Ga0310887_1009512513300031547SoilVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR
Ga0307408_10001141843300031548RhizosphereMRRALYNTIASFGLVASSASCVIVDPGCGAGGASILVSPTVVFVAVGQSATPKATWCRNGHYDPMSPQWSLASTADAEFVSLDASTGRITGRRVGTATVIASSDGVEGASVSVTVR
Ga0310893_1005835513300031892SoilMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVLLDGSTGRITGRRVGTATVIASSDGVDGASVSVTVR
Ga0310906_1037675723300032013SoilRSSRMRRALSSSIACLAIVALSASCVIVDPGCGAGGAAILVSPTVVFVAVGQSAIPKASWCRNGHYDPMSPQWSLASSADGDVVSLDASTGRITGRRVGTATVIASSDGVDGASVSVTVR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.