Metagenome / Metatranscriptome Family F094213

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094213
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	119 residues
Representative Sequence	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL
Number of Associated Samples	86
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.77 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	86.79 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (10.377 % of family members)
Environment Ontology (ENVO)	Unclassified (63.208 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (80.189 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.34% β-sheet: 18.85% Coil/Unstructured: 41.80%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02518	HATPase_c	38.68
PF03150	CCP_MauG	6.60
PF13188	PAS_8	4.72
PF05787	DUF839	3.77
PF12849	PBP_like_2	2.83
PF00486	Trans_reg_C	1.89
PF02872	5_nucleotid_C	0.94
PF01554	MatE	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	6.60
COG3211	Secreted phosphatase, PhoX family	General function prediction only [R]	3.77
COG0737	2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family	Defense mechanisms [V]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	83.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	83.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	71.70 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	7.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	71.70 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	7.55 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	71.70 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	7.55 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	71.70 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	4.72 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	1.89 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	71.70 %
Nocardia concava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia concava	1.89 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1.89 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1.89 %
Gemmatimonas phototrophica	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	0.94 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	71.70 %
Nocardia concava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia concava	1.89 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1.89 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1.89 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.94 %
Gemmatimonas phototrophica	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105556089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105559012	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005327\|Ga0070658_10031079	All Organisms → cellular organisms → Bacteria	4287	Open in IMG/M
3300005328\|Ga0070676_10131860	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300005331\|Ga0070670_100197461	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1748	Open in IMG/M
3300005333\|Ga0070677_10096175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1297	Open in IMG/M
3300005344\|Ga0070661_100584264	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	902	Open in IMG/M
3300005353\|Ga0070669_100512507	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300005354\|Ga0070675_100646702	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	961	Open in IMG/M
3300005355\|Ga0070671_100516217	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1028	Open in IMG/M
3300005355\|Ga0070671_101955855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia concava	522	Open in IMG/M
3300005366\|Ga0070659_100053712	All Organisms → cellular organisms → Bacteria	3172	Open in IMG/M
3300005366\|Ga0070659_101400018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300005367\|Ga0070667_101046871	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300005437\|Ga0070710_10151143	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300005439\|Ga0070711_101843527	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	531	Open in IMG/M
3300005457\|Ga0070662_101542707	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300005458\|Ga0070681_10968852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	770	Open in IMG/M
3300005458\|Ga0070681_11723591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300005459\|Ga0068867_100046538	All Organisms → cellular organisms → Bacteria	3187	Open in IMG/M
3300005535\|Ga0070684_100015217	All Organisms → cellular organisms → Bacteria	6257	Open in IMG/M
3300005539\|Ga0068853_100092476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	2661	Open in IMG/M
3300005543\|Ga0070672_100914969	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	775	Open in IMG/M
3300005543\|Ga0070672_101713196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia concava	565	Open in IMG/M
3300005543\|Ga0070672_101852867	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300005547\|Ga0070693_101492515	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300005564\|Ga0070664_100441612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1194	Open in IMG/M
3300005578\|Ga0068854_101985598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	536	Open in IMG/M
3300005614\|Ga0068856_101256679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	756	Open in IMG/M
3300005616\|Ga0068852_102770303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300005718\|Ga0068866_11041218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300005719\|Ga0068861_100606916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1005	Open in IMG/M
3300005719\|Ga0068861_100628522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	989	Open in IMG/M
3300005834\|Ga0068851_10179468	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1172	Open in IMG/M
3300005843\|Ga0068860_100244725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1745	Open in IMG/M
3300006175\|Ga0070712_100375583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1169	Open in IMG/M
3300006581\|Ga0074048_12648645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300006953\|Ga0074063_11926611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300009098\|Ga0105245_10411608	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1353	Open in IMG/M
3300009137\|Ga0066709_101708346	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300009551\|Ga0105238_12288386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300010401\|Ga0134121_11425210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	704	Open in IMG/M
3300010403\|Ga0134123_12244345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300012951\|Ga0164300_10654718	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300012955\|Ga0164298_10067654	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300012955\|Ga0164298_10612008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	750	Open in IMG/M
3300012957\|Ga0164303_10139181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1268	Open in IMG/M
3300012958\|Ga0164299_10081516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1625	Open in IMG/M
3300012958\|Ga0164299_10481145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	821	Open in IMG/M
3300012984\|Ga0164309_10335364	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1104	Open in IMG/M
3300012986\|Ga0164304_10715896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	762	Open in IMG/M
3300012987\|Ga0164307_10065744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2146	Open in IMG/M
3300013100\|Ga0157373_10303150	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1134	Open in IMG/M
3300013102\|Ga0157371_11066051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	619	Open in IMG/M
3300013104\|Ga0157370_11999760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300013306\|Ga0163162_10376010	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300013307\|Ga0157372_10857753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1054	Open in IMG/M
3300013307\|Ga0157372_10875446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1042	Open in IMG/M
3300013308\|Ga0157375_11471193	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	803	Open in IMG/M
3300013308\|Ga0157375_13231345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300014325\|Ga0163163_10421811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1393	Open in IMG/M
3300014968\|Ga0157379_11062573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	774	Open in IMG/M
3300014969\|Ga0157376_11937124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	627	Open in IMG/M
3300015371\|Ga0132258_10099437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	6848	Open in IMG/M
3300015371\|Ga0132258_10981534	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2134	Open in IMG/M
3300015371\|Ga0132258_11072177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2037	Open in IMG/M
3300015372\|Ga0132256_103642687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300015374\|Ga0132255_101709355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	955	Open in IMG/M
3300017792\|Ga0163161_10254348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1370	Open in IMG/M
3300017792\|Ga0163161_11278318	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300021445\|Ga0182009_10841724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300022756\|Ga0222622_10206908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1306	Open in IMG/M
3300025315\|Ga0207697_10477772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300025321\|Ga0207656_10324498	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300025893\|Ga0207682_10244165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	835	Open in IMG/M
3300025898\|Ga0207692_11166173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300025899\|Ga0207642_10125610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1330	Open in IMG/M
3300025901\|Ga0207688_10136796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1439	Open in IMG/M
3300025907\|Ga0207645_10063542	All Organisms → cellular organisms → Bacteria	2359	Open in IMG/M
3300025909\|Ga0207705_10114909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1991	Open in IMG/M
3300025912\|Ga0207707_11029031	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	675	Open in IMG/M
3300025917\|Ga0207660_10672481	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	844	Open in IMG/M
3300025919\|Ga0207657_10385978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1102	Open in IMG/M
3300025921\|Ga0207652_10651378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	942	Open in IMG/M
3300025925\|Ga0207650_10176980	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1698	Open in IMG/M
3300025928\|Ga0207700_11374836	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	628	Open in IMG/M
3300025931\|Ga0207644_11405725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	586	Open in IMG/M
3300025932\|Ga0207690_10007361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6533	Open in IMG/M
3300025934\|Ga0207686_10029290	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300025940\|Ga0207691_10564346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	965	Open in IMG/M
3300025941\|Ga0207711_10715380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300025941\|Ga0207711_10717738	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	932	Open in IMG/M
3300025944\|Ga0207661_10073175	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	2806	Open in IMG/M
3300025944\|Ga0207661_11054881	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
3300025945\|Ga0207679_10425915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1172	Open in IMG/M
3300025945\|Ga0207679_10631744	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	967	Open in IMG/M
3300025981\|Ga0207640_11440988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300025986\|Ga0207658_10606609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	984	Open in IMG/M
3300026041\|Ga0207639_10319043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1379	Open in IMG/M
3300026118\|Ga0207675_100227264	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1799	Open in IMG/M
3300026118\|Ga0207675_100279329	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1622	Open in IMG/M
3300026142\|Ga0207698_11239418	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300031538\|Ga0310888_10949159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	539	Open in IMG/M
3300031938\|Ga0308175_100005080	All Organisms → cellular organisms → Bacteria	9306	Open in IMG/M
3300031938\|Ga0308175_100243513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1800	Open in IMG/M
3300031938\|Ga0308175_102090556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.04%
Environmental	Environmental	33.96%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.04%
Terrestrial	Environmental → Terrestrial	33.02%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.57%
Soil	Environmental → Terrestrial → Soil	33.02%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.53%
Sediment	Environmental → Aquatic → Sediment	0.94%
Roots	Host-Associated → Plants → Roots	0.94%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	27.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.81%
Loam	Environmental → Terrestrial → Soil → Loam	13.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	27.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.21%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	10.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.49%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.49%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1055560892	3300000364	Soil	VTTRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTTLDEGAMDTIRALVRYWRETRNGNFRLAFACEHDXASVVEAESAPPAARRIDQLIGRSAALTGMFL
INPhiseqgaiiFebDRAFT_1055590122	3300000364	Soil	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIEQVIGRSAALTGMFL*
Ga0070658_100310792	3300005327	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACERDVVSAIEPESPPPITRRVDRFIGRSAALTGMFL
Ga0070676_101318602	3300005328	Miscanthus Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0070670_1001974611	3300005331	Switchgrass Rhizosphere	NRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPATRRIDQFIGRSAALTGMFL*
Ga0070677_100961752	3300005333	Miscanthus Rhizosphere	MTRLLHALEVSDGSATLYLSGRLAGADAFVLRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDRSAALTGMFL*
Ga0070661_1005842642	3300005344	Corn Rhizosphere	HDAFSLRGVCRDIPVHVRTLRLDLHGVIALDAGAMDTIRAVVRYWRETRNGTFRLSFASEQDVASVAQPESAPAAGRRLDHVIGRSAALTGMFL*
Ga0070669_1005125072	3300005353	Switchgrass Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRPIDQVIGRSAALTGMFL*
Ga0070675_1006467022	3300005354	Miscanthus Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPVRVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIANLVEPEPEPAPPTVR
Ga0070671_1005162172	3300005355	Switchgrass Rhizosphere	QRKLSSLRRYTTAAYVWVHRCAHRRALKHTSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPITRRVDRFIGRSAALTGMFL*
Ga0070671_1019558551	3300005355	Switchgrass Rhizosphere	MVHRCAPWRAFEHTSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPAQVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASVVEPEPQPPTGRRIDQLIGRSAALTGMFL*
Ga0070659_1000537124	3300005366	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWRETRNGTFRLAFACERDVVSAIEPESPPPITRRVDRFIGRSAALTGMFL
Ga0070659_1014000181	3300005366	Corn Rhizosphere	TTRLLHALEVSDGSATLYLSGPLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLALACEHDIARVVEPEPEPAPPTGRRIDQIIGRSAALTGMFL*
Ga0070667_1010468712	3300005367	Switchgrass Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASVVEPEPPAPTGRRLDQLIGRSAALTGMFL
Ga0070710_101511432	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VTNRLVHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPMHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASAVEPESVPPTGRRLDQLIGRSAALTGMFL
Ga0070711_1018435271	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GSDAFPLRGVCRDIPMHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASAVEPESVPPTGRRLDQLIGRSAALTGMFL*
Ga0070662_1015427071	3300005457	Corn Rhizosphere	TGLGSVMTRLLHALEVSDGSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMNTIRALVRYWRETRNGNFRLAFACEQDVASAVEPESPPPTSRRVDQIFGRSAALTGMFL*
Ga0070681_109688522	3300005458	Corn Rhizosphere	LAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMNTIRALVRYWRETRNGNFRLAFACEQDVASAVEPESPPPTSRRVDQIFGRSAALTGMFL*
Ga0070681_117235912	3300005458	Corn Rhizosphere	RRALKHTSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPATRRIDQFIGRSAALTGMFL*
Ga0068867_1000465383	3300005459	Miscanthus Rhizosphere	LLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0070684_1000152172	3300005535	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPATRRIDQFIGRSAALTGMFL
Ga0068853_1000924762	3300005539	Corn Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMNTIRALVRYWRETRNGNFRLAFATEQDVVSAIEPASPPPTTGRIDHVIGRSAALTGMFL
Ga0070672_1009149691	3300005543	Miscanthus Rhizosphere	TGLGSVMTRLLHALEVSDGSATLYLSGRLAGADAFVLRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDRSAALTGMFL*
Ga0070672_1017131961	3300005543	Miscanthus Rhizosphere	FPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDSIRALVRYWREVRNGSFRLAFACEHDIASVVEPEPAAPTGRRLDQLIGRSAALTGMFL*
Ga0070672_1018528671	3300005543	Miscanthus Rhizosphere	AWRTCRGDERGGARHDRRSVAAHSELSSLRRYTTAAFHRVHRCAPGRAFEHTSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPVRVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIANVVEPEPEPAPPTVRRLDQLIGRSAALTGMFL
Ga0070693_1014925152	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	RLLHALEVSDGSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWRETRNGNFRLAFACEQDVANAIEPESPPPTSRRVDQLFGRSAALTGMFL*
Ga0070664_1004416121	3300005564	Corn Rhizosphere	VTTRLLHALEVSDSSATLYLSGRLAGHDAFSLRGVCRDIPVHVRTLRLDLHGVTALDAGAMDTIRAVVRYWRETRNGSFRLAFASEQDVASVAQPESAPAAGRRLDHVIGRSAALTGMFL
Ga0068854_1019855981	3300005578	Corn Rhizosphere	RASWDGGRPSASGCRRELSSLRRYTTAACAWVHRCAGRRALKHTLTGLGSVTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPTTRRIDQFIGRSAALTGMFL*
Ga0068856_1012566791	3300005614	Corn Rhizosphere	VTSRLLHALEVSDSSATLYLSGRLAGFDAFPLRGVCRDIPIHVRTLRLDLHGVTSLDDGAMDAIRALVRYWRESRNGSFRLAFACEQDVASVIEPEGASPAARRLEQFIGRSAALTGMFL
Ga0068852_1027703031	3300005616	Corn Rhizosphere	RLLHALEVSDGSATLYLSGPLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLALACEHDIARVVEPEPEPAPPTGRRIDQIIGRSAALTGMFL*
Ga0068866_110412181	3300005718	Miscanthus Rhizosphere	LAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0068861_1006069163	3300005719	Switchgrass Rhizosphere	LEHTSTGFGSVMTRLLHALEVSDGSATLYLSGRLAGADAFMLRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDRSAALTGMFL*
Ga0068861_1006285222	3300005719	Switchgrass Rhizosphere	ATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0068851_101794682	3300005834	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPITRRVDQFIGRSAALTGMFL
Ga0068860_1002447251	3300005843	Switchgrass Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNG
Ga0070712_1003755831	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTTRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPMHVRTLRLDLHGVNALDEGAMDTIRALVRYWRETRNGNFRLAFACEHDIASVVEPEPEPAAPAGKRIDQLIGRSAALTGMFL*
Ga0074048_126486451	3300006581	Soil	VTTRLLHALEVSDGSATLYLSGRLAGADAFLLRGVCRDIPLPVRTLRLDLHGVTALDEGAMDTIRALVRYWRETRNGNFRLAFATEHIIANIVERESAPASGTRVDQIVGRSAALTGMFL
Ga0074063_119266112	3300006953	Soil	GRLAGSDAFPLRGVCRDIPVRVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVIEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0105245_104116081	3300009098	Miscanthus Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWRETRNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQ
Ga0066709_1017083462	3300009137	Grasslands Soil	VTTRLRHALEVSDGSATLYLSGHLAGADAFELRGVCHDIPLRVRTLRLDLHGVTALDEGAMDTIRALVRYWRETRNGNFRLGFATEHVIASMVEHQTAHVGHMKQALSAADPVQRPR*
Ga0105238_122883862	3300009551	Corn Rhizosphere	LEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPTTRRIDQFIGRSAALTGMFL*
Ga0134121_114252102	3300010401	Terrestrial Soil	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARSGNFRLAFACEHDIASVVEAEPEPAPSNG
Ga0134123_122443451	3300010403	Terrestrial Soil	TSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0164300_106547182	3300012951	Soil	HTVHRCVHGRAFEHTSTGLGSVTNRLLPALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0164298_100676542	3300012955	Soil	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPQPAPSNGRRIDQVIGRSAALTGMFL*
Ga0164298_106120082	3300012955	Soil	VTTRLLHALEVSDGSATLYLSGRLAGRDAFFLRGVCRDIPLPVRTLRLDLHAVTALGEGAMDTIRALVRYWRETRNGNFRLAFATEHAIERIIEQESAPTSETRVEHVIGRWAALTGMFL
Ga0164303_101391813	3300012957	Soil	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFTCEHDIASVVEAEPQPAPSNGRRIDQVIGRSAALTGMFL*
Ga0164299_100815161	3300012958	Soil	HRCVHGRAFEHTSTGLGSVTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFTCEHDIASVVEAEPQPAPSNGRRIDQVIGRSAALTGMFL*
Ga0164299_104811452	3300012958	Soil	VTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDSFRALVRYWREVRNGNFRLAFACEHDIASVVEPEPAAPTGGRLDQLIGRSAALTGMFL
Ga0164309_103353642	3300012984	Soil	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFTCEHDIASVVEAEPEPAPPNGRRIDQVIGRSAALTGMFL*
Ga0164304_107158961	3300012986	Soil	VTTRLLHALEVSDSSATLYLSGRLAGYDAFTLRGVCRDIPVHVRTLRLDLHGLTALDEGAMEAIRALVRYWRETRNGNFRLAFACERDVVSAIEPENPAPADRPIDQLIGRSAALTGMFL
Ga0164307_100657444	3300012987	Soil	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAAFTGMFL*
Ga0157373_103031502	3300013100	Corn Rhizosphere	VTTRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWRETRNGTFRLAFACERDVVSAIEPESPPPTTRRIDQFIGRSAALTGMFL
Ga0157371_110660512	3300013102	Corn Rhizosphere	YLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRPIDQVIGRSAALTGMFL*
Ga0157370_119997602	3300013104	Corn Rhizosphere	SGRLAGSDAFPLRGVCRDIPMHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGSFRLAFATEQDVANVVEQENAPSAARRLDQFIGRSAALTGMFL*
Ga0163162_103760102	3300013306	Switchgrass Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTELDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0157372_108577532	3300013307	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDAIRALVRYWRETRNGNFRLAFATEQDVVSAIEPASPPPTTGRIDHVIGRSAALTGMFL
Ga0157372_108754462	3300013307	Corn Rhizosphere	TLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMNTIRALVRYWRETRNGNFRLAFACEQDVASAVEPESPPPTSRRVDQIFGRSAALTGMFL*
Ga0157375_114711932	3300013308	Miscanthus Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASVVEPEPAAPTGRRLDQLIGRSAALTGMFL
Ga0157375_132313451	3300013308	Miscanthus Rhizosphere	SSATLYLSGRLAGSDAFPLRGVCRDIPVRVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIANVVEPEPEPAPPTVRRLDQLIGRSAALTGMFL*
Ga0163163_104218112	3300014325	Switchgrass Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACERDVVSAIEPESPPPTTRRIDQFIGRSAALTGMFL
Ga0157379_110625731	3300014968	Switchgrass Rhizosphere	RVFEHTSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDSIRALVRYWREVRNGNFRLAFACEHDIASVVEPEPPAPTGRRLDQLIGRSAALTGMFL*
Ga0157376_119371241	3300014969	Miscanthus Rhizosphere	VTNRLLHALEVSDGSATLYPSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL*
Ga0132258_100994372	3300015371	Arabidopsis Rhizosphere	VTTRLLHALEVSDGSATLYLSGRLAGCDAFLLRGVCRDIPLPVRTLRLDLHAVTALDEGAMDTIRALVRYWREARNGNFRLAFATEHAIERIIEQQSAPTSEARVDHLIGRSAALTGMFL
Ga0132258_109815343	3300015371	Arabidopsis Rhizosphere	VTNRLLHALEVSDGSATLYLSGPLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTELDEGAMDTIRALVRYWREARNGSFRLALAHEHDIASVVEPEPEPAPPTGRRIDQLIGRSAALTGMFL*
Ga0132258_110721771	3300015371	Arabidopsis Rhizosphere	MTRLLHALEVSDGSATLYLSGRLAGADAFLLRGVCRDIPLSVRTLRLDLHGVTALEDGAMDTVRALVRYWRETRNGSFRLAFATEHVVATVVELETGSAASARPDQFLDRSAALTGMFL*
Ga0132256_1036426871	3300015372	Arabidopsis Rhizosphere	VTNRLLHALEVSDGSATLYLSGPLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGSFRLALAHEHDIASVVEPEPEPAPPTGRRIDQLIGRSAALTGMFL*
Ga0132255_1017093551	3300015374	Arabidopsis Rhizosphere	VTNRLLHALEVSDGSATLYLSGPLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTELDEGAMDTIRALVRYWREARNGNFRLALACEHDIASVVEPEPEPAPPTGRRIDQLIERSAALTGMFL*
Ga0163161_102543481	3300017792	Switchgrass Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDSIRALVRYWREVRNGNFRLAFACEHDIASVVEPEPAAPTGRRLDRLIGRSAALTGMFL
Ga0163161_112783182	3300017792	Switchgrass Rhizosphere	LHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL
Ga0182009_108417241	3300021445	Soil	VTTRLLHALEVSDSSATLYLSGRLAGHDVFPLRGVCRDIPVHVRTLRLDLHGLTALDEGAMDAIRALVRYWREARNGSFRLAFACEHDVVSATEPESPPPTTGRIDQFIGRSAALTGMFL
Ga0222622_102069081	3300022756	Groundwater Sediment	MTRLLHALEVSDGSATLYLSGRLAGTDAFLLRGVCRDIPLSVRTLRLDLHGVTTLEDGAMDTVRALVRYWRDTRNGSFRLAFATEHVVATVVERETGSATSARPNQFVDHSAALTGMFL
Ga0207697_104777721	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	AFEHTSTGLGSVTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL
Ga0207656_103244981	3300025321	Corn Rhizosphere	LKHTLTGLGSVTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYSREARNGTFRLAFACERDVVSAIEPESPPPITRRVDQFIGRSAALTGMFL
Ga0207682_102441652	3300025893	Miscanthus Rhizosphere	MTRLLHALEVSDGSATLYLSGRLAGADAFVLRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDRSAALTGMFL
Ga0207692_111661732	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AGSDAFPLRGVCRDIPMHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASAVEPESVPPTGRRLDQLIGRSAALTGMFL
Ga0207642_101256102	3300025899	Miscanthus Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL
Ga0207688_101367961	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	AGADAFVLRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDRSAALTGMFL
Ga0207645_100635422	3300025907	Miscanthus Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDSIRALVRYWREVRNGSFRLAFACEHDIASVVEPEPAAPTGRRLDQLIGRSAALTGMFL
Ga0207705_101149092	3300025909	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPITRRVDRFIGRSAALTGMFL
Ga0207707_110290312	3300025912	Corn Rhizosphere	VTTRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPITRRVDRFIGRSAALTGMFL
Ga0207660_106724811	3300025917	Corn Rhizosphere	VNTRLLHALEVSDGSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPITRRVDQFIGRSAALTGMFL
Ga0207657_103859782	3300025919	Corn Rhizosphere	YLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMNTIRALVRYWRETRNGNFRLAFACEQDVASAVEPESPPPTSRRVDQIFGRSAALTGMFL
Ga0207652_106513781	3300025921	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPITRR
Ga0207650_101769801	3300025925	Switchgrass Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACERDVVSAIEPESPPPITRRVDQFIGRSAALTGMFL
Ga0207700_113748362	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGCDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGSFRLAFACEHDIAEVVEAESAPPTGRRLDQLIGRSAALTGMFL
Ga0207644_114057251	3300025931	Switchgrass Rhizosphere	DGGRRSASGCQRKLSSLRRYTTAAYVWVHRCAHRRALKHTSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPTTRRIDQFIGRSAALTGMFL
Ga0207690_100073614	3300025932	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWRETRNGTFRLAFACERDVVSAIEPESPPPITRRVDQFIGRSAALTGMFL
Ga0207686_100292902	3300025934	Miscanthus Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRPIDQVIGRSAALTGMFL
Ga0207691_105643461	3300025940	Miscanthus Rhizosphere	VTTRLQHALEVSDGSATLYLSGRLAGADAFVLRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDDSERHTRDTCASSDVHYPQGAIG
Ga0207711_107153801	3300025941	Switchgrass Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPAQVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASVVEPEPAAPTGRRLDQLIGRSAALTGMFL
Ga0207711_107177381	3300025941	Switchgrass Rhizosphere	DGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL
Ga0207661_100731751	3300025944	Corn Rhizosphere	VTTRLLHALEVSDSSATLYLSGRLAGHDAFSLRGVCRGIPVHVRTLRLDLHGVTALDAGAMDTIRAVVRYWRETRNGTFRLTFASEQDVASVAQPESAPAAGRRLDHVIGRSAAL
Ga0207661_110548811	3300025944	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPATRRIDQ
Ga0207679_104259151	3300025945	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACERDVVSAIEPESPPPITRRVDQFIGRSAALTGMFLCNDS
Ga0207679_106317442	3300025945	Corn Rhizosphere	VTTRLLHALEVSDSSATLYLSGRLAGHDAFSLRGVCRDIPVHVRTLRLDLHGVTALDAGAMDTIRAVVRYWRETRNGTFRLAFASEQDVASVAQPESAPAAGRRLDHVIGRSAALTGMFL
Ga0207640_114409881	3300025981	Corn Rhizosphere	VTNRLLHALEVSDSSATLYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACEQDVVSAIEPESPPPTTRRIDQFIGRSAALTGMFL
Ga0207658_106066091	3300025986	Switchgrass Rhizosphere	TAASHAVHRCAPGRVFEHTSTGLGSVTNRLLHALEVSDSSATLYLSGRLAGSDAFPLRGVCRDIPTHVRTLRLDLHGVTALDEGAMDTIRALVRYWREVRNGNFRLAFACEHDIASVVEPEPPAPTGRRLDQLIGRSAALTGMFL
Ga0207639_103190431	3300026041	Corn Rhizosphere	LYLSGRLAGYDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGTFRLAFACERDVVSAIEPESPPPITRRVDQFIGRSAALTGMFL
Ga0207675_1002272643	3300026118	Switchgrass Rhizosphere	MTRLLHALEVSDGSATLYLSGRLAGADAFMLRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDRSAALTGMFL
Ga0207675_1002793291	3300026118	Switchgrass Rhizosphere	GLGSVTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRRIDQVIGRSAALTGMFL
Ga0207698_112394182	3300026142	Corn Rhizosphere	VTNRLLHALEVSDGSATLYLSGRLAGSDAFPLRGVCRDIPVHVRTLRLDLHGVTALDEGAMDTIRALVRYWREARNGNFRLAFACEHDIASVVEAEPEPAPSNGRPIDQV
Ga0310888_109491592	3300031538	Soil	LRGVCRDIPLQVRTLRLDLHGVTTLDEGAMDTVRALVRYWRETRNGCFRLAFATEHVVATVIEREPTAAIVPHLDPLVDRSAALTGMFL
Ga0308175_1000050808	3300031938	Soil	VTTRLLHALEVSDSSATLYLSGRLAGHDVFPLRGVCRDIPAHVRTLRLDLHGLTALDEGAMDAIRALVRYWREARDGNFRLALASQQCVVEAVQSESAPPSDRRIDPLIGRSAALTGMFL
Ga0308175_1002435133	3300031938	Soil	VTTRLLHALEVSDGSATLYLSGRLAGHDVFPLRGVCRDIPVHVRTLRLDLHGLTALDEGAMDAIRALVRYWREARNGNFRLAFACDHDIASVVEPESAPATGQRLDGIIGRSAALTGMFL
Ga0308175_1020905562	3300031938	Soil	RLAGFDAFPLRGVCRDIPMHVRTLRLDLHGVTALDEGAMDAIRALVRYWRETRNGTFRLAFACEHDVASMVEQESTPTAARQLDPFIGRSAALTGMFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094213

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences