Metagenome Family F094211

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094211
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	116 residues
Representative Sequence	MEPLFTRVDTASMATFLKIAARISAIGTFILAGLILGWQVTSWISTDEWNPFPISRALSLAPLERTAIYVTASVSDRPPPSSDVQTISDWFLDLPAGGFLLAVAAVLLSFSVIGASVEKQFATTDE
Number of Associated Samples	74
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.81 %
% of genes near scaffold ends (potentially truncated)	49.06 %
% of genes from short scaffolds (< 2000 bps)	82.08 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.925 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.245 % of family members)
Environment Ontology (ENVO)	Unclassified (40.566 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.057 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.29% β-sheet: 0.00% Coil/Unstructured: 35.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00483	NTP_transferase	4.72
PF01315	Ald_Xan_dh_C	3.77
PF02586	SRAP	2.83
PF13472	Lipase_GDSL_2	2.83
PF02397	Bac_transf	1.89
PF03734	YkuD	1.89
PF02738	MoCoBD_1	1.89
PF03401	TctC	0.94
PF13531	SBP_bac_11	0.94
PF13727	CoA_binding_3	0.94
PF04321	RmlD_sub_bind	0.94
PF00581	Rhodanese	0.94
PF14534	DUF4440	0.94
PF01019	G_glu_transpept	0.94
PF05598	DUF772	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.83
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.89
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.89
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.89
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.89
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	1.89
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.89
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.94
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.94
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
All Organisms	root	All Organisms	32.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
cellular organisms	root	All Organisms → cellular organisms	32.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.53 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.04 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.72 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	4.72 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.89 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	0.94 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.94 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.94 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.94 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	4.72 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	1.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.89 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.94 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	0.94 %
Pelomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas	0.94 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.94 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.94 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	4.72 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	1.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.89 %
Methylomonas paludis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	0.94 %
unclassified Pelomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → unclassified Pelomonas	0.94 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.94 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.94 %
Beijerinckia indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia indica	0.94 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	4.72 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.89 %
Bradyrhizobium sp. WSM2793	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	0.94 %
Pelomonas sp. KK5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → unclassified Pelomonas → Pelomonas sp. KK5	0.94 %
Beijerinckia indica subsp. indica	subspecies	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia indica → Beijerinckia indica subsp. indica	0.94 %
Methylomonas paludis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	0.94 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.94 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.92 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	4.72 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.89 %
Beijerinckia indica subsp. indica ATCC 9039	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia indica → Beijerinckia indica subsp. indica → Beijerinckia indica subsp. indica ATCC 9039	0.94 %
Bradyrhizobium sp. WSM2793	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	0.94 %
Pelomonas sp. KK5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → unclassified Pelomonas → Pelomonas sp. KK5	0.94 %
Methylomonas paludis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	0.94 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	0.94 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10568710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM2793	540	Open in IMG/M
3300004633\|Ga0066395_10339424	Not Available	832	Open in IMG/M
3300005332\|Ga0066388_100085411	All Organisms → cellular organisms → Bacteria	3552	Open in IMG/M
3300005332\|Ga0066388_101463197	Not Available	1192	Open in IMG/M
3300005332\|Ga0066388_101523808	Not Available	1171	Open in IMG/M
3300005332\|Ga0066388_101605367	Not Available	1145	Open in IMG/M
3300005332\|Ga0066388_101986754	Not Available	1042	Open in IMG/M
3300005332\|Ga0066388_103079569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	852	Open in IMG/M
3300005343\|Ga0070687_100976127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	612	Open in IMG/M
3300005547\|Ga0070693_101435611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	537	Open in IMG/M
3300005618\|Ga0068864_102538217	Not Available	518	Open in IMG/M
3300005713\|Ga0066905_100740906	Not Available	847	Open in IMG/M
3300005713\|Ga0066905_101217482	Not Available	674	Open in IMG/M
3300005713\|Ga0066905_101505308	Not Available	613	Open in IMG/M
3300005713\|Ga0066905_101946042	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_100124233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3601	Open in IMG/M
3300005764\|Ga0066903_100259987	Not Available	2692	Open in IMG/M
3300005764\|Ga0066903_100359254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Pelomonas → unclassified Pelomonas → Pelomonas sp. KK5	2362	Open in IMG/M
3300005937\|Ga0081455_10056631	All Organisms → cellular organisms → Bacteria → Proteobacteria	3327	Open in IMG/M
3300006058\|Ga0075432_10269285	Not Available	697	Open in IMG/M
3300006175\|Ga0070712_100413357	Not Available	1117	Open in IMG/M
3300006178\|Ga0075367_10418424	Not Available	848	Open in IMG/M
3300006358\|Ga0068871_100069968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → Beijerinckia indica → Beijerinckia indica subsp. indica → Beijerinckia indica subsp. indica ATCC 9039	2883	Open in IMG/M
3300006845\|Ga0075421_102211223	Not Available	580	Open in IMG/M
3300006854\|Ga0075425_101303645	Not Available	823	Open in IMG/M
3300006854\|Ga0075425_101707379	Not Available	708	Open in IMG/M
3300006871\|Ga0075434_100004218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12888	Open in IMG/M
3300006954\|Ga0079219_10028017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2188	Open in IMG/M
3300007788\|Ga0099795_10000595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6909	Open in IMG/M
3300009090\|Ga0099827_10530467	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1012	Open in IMG/M
3300009137\|Ga0066709_100721955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1435	Open in IMG/M
3300009137\|Ga0066709_104624612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300009177\|Ga0105248_11576929	Not Available	744	Open in IMG/M
3300009792\|Ga0126374_10203749	Not Available	1254	Open in IMG/M
3300010046\|Ga0126384_10094548	Not Available	2189	Open in IMG/M
3300010046\|Ga0126384_10512542	Not Available	1036	Open in IMG/M
3300010047\|Ga0126382_10343383	Not Available	1140	Open in IMG/M
3300010047\|Ga0126382_11094072	Not Available	706	Open in IMG/M
3300010047\|Ga0126382_11339772	Not Available	649	Open in IMG/M
3300010159\|Ga0099796_10028403	Not Available	1795	Open in IMG/M
3300010358\|Ga0126370_10054702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	2558	Open in IMG/M
3300010358\|Ga0126370_12037613	Not Available	562	Open in IMG/M
3300010359\|Ga0126376_10187634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1700	Open in IMG/M
3300010359\|Ga0126376_10208532	Not Available	1626	Open in IMG/M
3300010360\|Ga0126372_10016798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4170	Open in IMG/M
3300010360\|Ga0126372_10083013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	2338	Open in IMG/M
3300010360\|Ga0126372_10189504	Not Available	1698	Open in IMG/M
3300010360\|Ga0126372_10859144	Not Available	905	Open in IMG/M
3300010360\|Ga0126372_11490337	Not Available	712	Open in IMG/M
3300010360\|Ga0126372_12622340	Not Available	555	Open in IMG/M
3300010362\|Ga0126377_10097216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2678	Open in IMG/M
3300010362\|Ga0126377_10293860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas → Methylomonas paludis	1599	Open in IMG/M
3300010362\|Ga0126377_12173745	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300010398\|Ga0126383_11581489	Not Available	745	Open in IMG/M
3300011119\|Ga0105246_11846527	Not Available	579	Open in IMG/M
3300012199\|Ga0137383_10260632	Not Available	1270	Open in IMG/M
3300012200\|Ga0137382_10038507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2918	Open in IMG/M
3300012206\|Ga0137380_11309355	Not Available	609	Open in IMG/M
3300012206\|Ga0137380_11649503	Not Available	525	Open in IMG/M
3300012207\|Ga0137381_10357775	Not Available	1273	Open in IMG/M
3300012208\|Ga0137376_10410008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1177	Open in IMG/M
3300012209\|Ga0137379_10767941	Not Available	869	Open in IMG/M
3300012210\|Ga0137378_10524814	Not Available	1092	Open in IMG/M
3300012349\|Ga0137387_10563667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300012349\|Ga0137387_11269748	Not Available	517	Open in IMG/M
3300012351\|Ga0137386_10787095	Not Available	683	Open in IMG/M
3300012357\|Ga0137384_10696884	Not Available	825	Open in IMG/M
3300012359\|Ga0137385_11317705	Not Available	585	Open in IMG/M
3300012360\|Ga0137375_10214570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1808	Open in IMG/M
3300012469\|Ga0150984_114407134	Not Available	591	Open in IMG/M
3300012582\|Ga0137358_10575104	Not Available	757	Open in IMG/M
3300012683\|Ga0137398_10393667	Not Available	943	Open in IMG/M
3300012685\|Ga0137397_10071646	All Organisms → cellular organisms → Bacteria → Proteobacteria	2509	Open in IMG/M
3300012924\|Ga0137413_11168115	Not Available	612	Open in IMG/M
3300012925\|Ga0137419_10156688	Not Available	1650	Open in IMG/M
3300012927\|Ga0137416_11729315	Not Available	571	Open in IMG/M
3300012930\|Ga0137407_10225014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1692	Open in IMG/M
3300012930\|Ga0137407_11241562	Not Available	707	Open in IMG/M
3300012948\|Ga0126375_10637160	Not Available	820	Open in IMG/M
3300012948\|Ga0126375_10791274	Not Available	750	Open in IMG/M
3300012948\|Ga0126375_10849183	Not Available	728	Open in IMG/M
3300012948\|Ga0126375_11636580	Not Available	556	Open in IMG/M
3300012958\|Ga0164299_11209770	Not Available	572	Open in IMG/M
3300012971\|Ga0126369_11764621	Not Available	708	Open in IMG/M
3300012971\|Ga0126369_12862831	Not Available	565	Open in IMG/M
3300013308\|Ga0157375_10902763	Not Available	1027	Open in IMG/M
3300014968\|Ga0157379_11045219	Not Available	780	Open in IMG/M
3300015241\|Ga0137418_10328366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	1269	Open in IMG/M
3300015241\|Ga0137418_10829449	Not Available	689	Open in IMG/M
3300018072\|Ga0184635_10321638	Not Available	601	Open in IMG/M
3300020170\|Ga0179594_10420887	Not Available	507	Open in IMG/M
3300022756\|Ga0222622_10048613	Not Available	2382	Open in IMG/M
3300026095\|Ga0207676_11786661	Not Available	613	Open in IMG/M
3300026369\|Ga0257152_1024438	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	647	Open in IMG/M
3300026497\|Ga0257164_1089746	Not Available	525	Open in IMG/M
3300027512\|Ga0209179_1047163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	917	Open in IMG/M
3300027616\|Ga0209106_1132115	Not Available	559	Open in IMG/M
3300027775\|Ga0209177_10198287	Not Available	713	Open in IMG/M
3300027903\|Ga0209488_10000718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28102	Open in IMG/M
3300027907\|Ga0207428_10305844	Not Available	1176	Open in IMG/M
3300028536\|Ga0137415_10048134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	4145	Open in IMG/M
3300028792\|Ga0307504_10379962	Not Available	551	Open in IMG/M
3300028819\|Ga0307296_10461769	Not Available	695	Open in IMG/M
3300028876\|Ga0307286_10334070	Not Available	563	Open in IMG/M
3300031184\|Ga0307499_10063288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	938	Open in IMG/M
3300031198\|Ga0307500_10053434	Not Available	982	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.91%
Host-Associated	Host-Associated	15.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.02%
Plants	Host-Associated → Plants	15.09%
Aquatic	Environmental → Aquatic	1.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.02%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.83%
Sediment	Environmental → Aquatic → Sediment	1.89%
Roots	Host-Associated → Plants → Roots	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.09%
Loam	Environmental → Terrestrial → Soil → Loam	17.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.53%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.94%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_105687101	3300001661	Forest Soil	MGPLFARVNTASMATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQRISDWFLDLPAGG
Ga0066395_103394241	3300004633	Tropical Forest Soil	MEPLFTRVNVASMAVFLKIVASISAIGTGILAGVILGSQVTSWFLTNEWDPFPISRALSLAHLERPAIYVTASVSDRPSSFDFQTIYDWFLDLPAGGFLLTVAAVLLGFAMIGASMEKRFAATDN*
Ga0066388_1000854111	3300005332	Tropical Forest Soil	MRFSARCCRRASWRWEAYPILKDSPANAHNMSTLARMNGSRGDRMAPLFTRVNVASMAAFLKISACISAIGTGVLAGVILGSQVASWFLTNEWDPFPISRALSLAHLERPAIYITASASDRPPPWLDFQMICDWFLDLPAGGFLLAAAAVLLGFSRLGASMEKRFDATDK*
Ga0066388_1014631971	3300005332	Tropical Forest Soil	MATFLKITARISAIGTSILAGLILGWQIRSWVLTGEWDPFPISRALALAHVESTALYVTASVSERSSSWDFQTIYDWFLDLPAGGFLLAVAAVLLGFSIIGASVEKQSATTAK*
Ga0066388_1015238082	3300005332	Tropical Forest Soil	MGQGGRMEPLSKRVITAAMATFLKITARISASLTLILAGLILGWQITLWVLTDEWNPFPISRALALAHLERAAIYVTASTSERSSSLGDQTIYDWFLDLPAGGFLLAVAAVLLGFAIFGASMEKHLPKLTNSERIR*
Ga0066388_1016053672	3300005332	Tropical Forest Soil	MEPLFTRGITVWMATFLKIAARIAAIGTLLLAGLILGSQITSWILTDDWNPFPISRALSLAHFERPAVYVTASVSDRPSSLDLQTMFDWFLDLPAGGFLFAVAAVLLGFSIIGASVEKQFTTTDK*
Ga0066388_1019867541	3300005332	Tropical Forest Soil	MEPSFTQAVIASMAAFLKIAARIAAIATLLLAGLVLGSQVISWVLTDEWNPFPISKTLALAHVERAAVYVTASAPERSSSLDDQTIYDWFLDLPTSGFLLAVAAVLLGFSIFGASVEKQFSPTDK*
Ga0066388_1030795691	3300005332	Tropical Forest Soil	LILAGLILGWQITSWILTDEWNPFPISRALALAHLERPAIYVTASTSDRSSSLDVQTVYDWFLDLPAGGFLLAIAAVLLGFSFFGASVEKQFTTPDK*
Ga0070687_1009761271	3300005343	Switchgrass Rhizosphere	ARTKPQFTRVVMTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVLLGFSVIGASLEKQFAPTDK*
Ga0070693_1014356112	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVLLGFSVIGASLEKQFAPTDK*
Ga0068864_1025382171	3300005618	Switchgrass Rhizosphere	MTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVA
Ga0066905_1007409061	3300005713	Tropical Forest Soil	MIASMATFLKIVARISAIGTFILAGVILGWQVAFWILTDEWSPFPISRALSLAHFERTAIYVTASVSDSSPPSLDFQTMYDWFLDLPAGGFLLV
Ga0066905_1012174821	3300005713	Tropical Forest Soil	MEPFFTRDITAWMATFLKIAARIAAIGTLLLAVLILGSQVMSWILTDEWNPFPISRALALAHVERPAIYVTASTSDRPSSLDDQALYEWFLDLPAGGFLLAVAAVLLGFSRFGASVEKQFARTDK*
Ga0066905_1015053082	3300005713	Tropical Forest Soil	MSTLARMNGVEGGVCMESLFTRLTAWMATFLKIAARIAAIGTLLLAAVILGSQVTSWILTDEWNPFPISKALALAHLERTAIYVTASVSDRSSSLDDLTIYDWFLDLPTGGFLLVVAAVLVGFSIF
Ga0066905_1019460421	3300005713	Tropical Forest Soil	MEPLFTRVTTASMAAFLKIAAGIAAIATLLVAGVILGSQVMSWILTDEWIPFPISRALALAHLGRPAIYVIASAPDRSSSLDMQTVYDWFLDLPAGGFLL
Ga0066903_1001242332	3300005764	Tropical Forest Soil	MAPLFTRVNVASMAAFLKIAACISAIGTGVLAGVILGWQVISWFLTNEWDQFPISRALSLAHLERPAIYVTASASDRPPPSLDFQMIYDWFLNLPAGGFLLAVAAVLLGFSMIGSSMEKRFDATDN*
Ga0066903_1002599873	3300005764	Tropical Forest Soil	MSTLARMNGAGGRMEPLFIRGITVWMATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNPFPISRALSLAHFERPAVYVTASVSDRPSSLDLQTMFDWFLDLPAGGFLFAVAAVLLGFSIIGASVEKQFTTTDK*
Ga0066903_1003592543	3300005764	Tropical Forest Soil	MEPFFTRVTIASMATFLKIVARLSAIVTFILAGLILGWQVTSWILTDEWNTFPISRALSLAHLECPAIYVTASVSDRPSSFDIQTIYDWLLDLPAGGFLLAVAAVLLSFSAMGASVEKQFATTDK*
Ga0081455_100566316	3300005937	Tabebuia Heterophylla Rhizosphere	MEPLFTRVITASMAAFLKIAARIAAIATLLVAGVILGSQVTSWILTDEWIPFPISRALALAHLGRPATYVIASAPDRSSPLDVQTVYDWFLDLPAGGFLLAIAAVLLGFSFFGASVEKQFTKADK*
Ga0075432_102692851	3300006058	Populus Rhizosphere	MEPLFTRVVSTASMAIFLKIAARISAIGTLILAGLILGWQVTSWILTDEWEPFPISRALSLAHIERPVIYVTASVSDKPSSFDVQTIYDWFLDLPAGAFLLAVAAVLLGFSIIGASVERQFHTTDN*
Ga0070712_1004133573	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRVDIASMATFLKITARLSAIGTFMLGALIVGWQVTQWMSTDEWNPFPISSALYLAHLQPPAIYVTASVSDSQSSLDLQTIIDWFLDIPASGFLLAVAAVLLGFSMVGASIEKRFATTDK
Ga0075367_104184241	3300006178	Populus Endosphere	MEPLFTRVVSTASMAIFLKIAARISAIGTLILAGLILGWQVTSWILTDEWEPFPISRALSLAHIERPVIYVTASVSDKPSSFDVQTIYDWFLDLPAGAFLLAVAAVLLGFSILGASVERQFHTTDN*
Ga0068871_1000699682	3300006358	Miscanthus Rhizosphere	MTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVLLGFSVIGASLEKQFAPTDK*
Ga0075421_1022112231	3300006845	Populus Rhizosphere	MIASMATFLKIVARVSAIGTFILAGTILGSQVISWIQTDEWNPFPISRALSLAHLERPAIYVTASVSDRPASLDFQTICDWFLDLPAGGFLLAVAAVLLGFSIVGASLEKQFATTDK*
Ga0075425_1013036452	3300006854	Populus Rhizosphere	MAIFLKIAARISAIGTLILAGLILGWQVTSWILTDEWEPFPISRALSLAHIERPVIYVTASVSDKPSSFDVQTIYDWFLDLPAGAFLLAVAAVLLGFSILGASVERQFHTTDN*
Ga0075425_1017073792	3300006854	Populus Rhizosphere	LFTRVVMTAWMATFLKIVARLSAIGTFILAGVIVGWQVTFWILTDEWNSFPISRALSLAHFERTAIYVTASVPDNPPPSLDLQTIYDWFLDLPASGFLLVVAAVLSAFSLIGASLAKQFAATDK*
Ga0075434_1000042189	3300006871	Populus Rhizosphere	MEPLFTRVVSTASMAIFLKIAARISAIGTLILAGLILGWQVTSWILTDEWEPFPISRALSLAHIEHPVIYVTASVSDKPSSFDVQTIYDWFLDLPAGAFLLAVAAVLLGFSILGASVERQFHTTDN*
Ga0079219_100280172	3300006954	Agricultural Soil	MTAWMATFLKIVARLSAIGTFILAGVIVGWQVTFWILTDEWNSFPISRALSLAHFERTAIYVTASVPDNPPPSLDLQTIYDWFLDLPASGFLLVVAAVLSAFSLIGASLAKQFAATDK*
Ga0099795_100005952	3300007788	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATPDK*
Ga0099827_105304671	3300009090	Vadose Zone Soil	KISARISAIGTVVLAGLIVGWQVTSWILTDDWNPFPISRALSYAHFERPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLLAVAAVLLSFSMVGASMERKFDTTDE*
Ga0066709_1007219552	3300009137	Grasslands Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASVSDRPPPSSDVQTISDWFLDLPTGGFLLAVAAVLLGFSIIGAFVEKQFATTDE*
Ga0066709_1046246122	3300009137	Grasslands Soil	AARISAIGTIILAGLILGWQVTSWIRTDEWNPFPISRALSLAHLERPAVYITASLADRPRPSLDFQTICDWFLDLPAGGSLLAVAAVLLGFSVIGASVEKQFATSEK*
Ga0105248_115769291	3300009177	Switchgrass Rhizosphere	MTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVL
Ga0126374_102037491	3300009792	Tropical Forest Soil	MEPSLTQAVIASMAAFLKMAARIAAIATLLLAGLVLGSQVISWVLTDEWNPFPISKTLALAHVERAAVYVTASAPERSSSLDDQTIYDWFLDLPTSGFLLAVAAVLLGFSIFGASVEKQFSPTDK*
Ga0126384_100945484	3300010046	Tropical Forest Soil	MFTRVSIVLMATFLKIAARISAIGTFILAGLILGWQVRSWILTDEWDPFPISRALSLAHFERPVIYVTASATDRPPPSFDFQAIYDWFLDLSAGGFLLAVAAVLLGFSMIGASVEKQFGATDK*
Ga0126384_105125421	3300010046	Tropical Forest Soil	MTASMATFLKFVARISAIGTFILAGLILGWQVISWILTGEWNPFPISRALSLTHFERSAIYVTASASDTPSSLHFQTIYEWFLDIPTGGVLLAVAAVLLGFSVIGASVEKQFARTDK*
Ga0126382_103433832	3300010047	Tropical Forest Soil	MATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNRFPISRALSLAHFERPAVYVTARVYDRPSSLGVQTIYDWFLDLPAGGFLFAVAAVLLGFSIIGASIEKQFTITDK*
Ga0126382_110940722	3300010047	Tropical Forest Soil	MATFLKIAARIAAIGTLLLAAVILGSQVTSWILTDEWNPFPISKALALAHLERTAIYVTASVSDRPSSLDQTFYEWFLDLPAGGFLLAAAAVLLGFAIFGASVEK
Ga0126382_113397721	3300010047	Tropical Forest Soil	MEPLFTRVITASMAAFLKIAARIAAIATLLLAGVILGSQVTSWILTDVWNPFPISRALALAHLERPAIYVTASTSDRSSSLDVQTVYDWFLDLPAGGFLLAIAAVLLGFSFFGASVEKQFTTPDK*
Ga0099796_100284033	3300010159	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLSISRALYLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATP
Ga0126370_100547023	3300010358	Tropical Forest Soil	MEPLFIRGITVWMATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNPFPISRALSLAHFERPAVYVTASVSDRPSSLDLQTMFDWFLDLPAGGFLFAVAAVLLGFSIIGASVEKQFTTTDK*
Ga0126370_120376131	3300010358	Tropical Forest Soil	MEPLFARGITVWMATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNPFPISRALSLAHLERPAVYVTASVSDRPSSFDIQTIYDWFLGLPAGGFLFAVAAVLLGFS
Ga0126376_101876341	3300010359	Tropical Forest Soil	MATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNRFPISRALSLAHFERPAVYVTARVYDRPSSLGVQTIYDWFLDLPAGGFLFAVAAVLLGFSIIGASIEKQFTITDK
Ga0126376_102085323	3300010359	Tropical Forest Soil	MEPSLTQAVIASMAAFLKIAARIAAIATLLLAGLVLGSQVISWVLTDEWNPFPISKTLALAHVERAAVYVTASAPERSSSLDDQTIYDWFLDLPTSGFLLAVAAVLLGFSIFGASVEKQFSPTDK*
Ga0126372_100167984	3300010360	Tropical Forest Soil	MEPSLTQAVIASMAAFLKMAARIAAIATLLLAGLVLGSQVISWILTDEWNPFPISRTLALAHVERAVVYVTASAPERSSSLDDQTIYDWFLDLPTSGFLLAVAAVLLGFSIFGASVEKQFSPTDK*
Ga0126372_100830133	3300010360	Tropical Forest Soil	RGITVWMATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNPFPISRALALAHFERPAVYVTASVSDRPSSLDLQTMFDWFLDLPAGGFLFAVAAVLLGFSIVGASVEKQFTRTDT*
Ga0126372_101895041	3300010360	Tropical Forest Soil	MFTRVSIVLMATFLKIAARISAIGTFILAGLILGWQVRSWILTDEWDPFPISRALSLAHFERPVIYVTASATDRPPPSFDFQAIYDWFLDLSAGGFLLAVAVVLLGFSMIGASVEKQFGATDK*
Ga0126372_108591442	3300010360	Tropical Forest Soil	MATFLKITARISAIGTSILAGVILGWQIGSWMLTGEWDPFPISRALALAHVERTAIYVTASASERSSSWNFQTIYDWFLDLPAGGFLLAV
Ga0126372_114903372	3300010360	Tropical Forest Soil	MATFLKITARISAIGTSILAGVILGWQIGSWMLTGEWDPFSISRALALAHVESTALYVTASVSERSSSWDFQTIYDWFLDLPAGGFLLAVAAVLLGFSIIGASVEKQSATTAK*
Ga0126372_126223401	3300010360	Tropical Forest Soil	MSTLARMMGQGGAMEPFFARVTVASMATFLKIVARISAIVTFILAGLILGWQITSWILTDEWNSFPISRALSLAHLECPAIYVTASVTDRPSSFDIQTIYEWLLDLPAGGFLLAVAAVLLGFSAIGASMEKQFATTDK*
Ga0126377_100972162	3300010362	Tropical Forest Soil	MAPLFTRVNVASMAAFLKISACISAIGTGVLAGVILGSQVASWFLTNEWDPFPISRALSLAHLERPAIYITASASDRPPPWLDFQMICDWFLDLPAGGFLLAAAAVLLGFSRLGASMEKRFDATDK*
Ga0126377_102938602	3300010362	Tropical Forest Soil	MEPLFTWVTTASMATFLKITARISAIGTSILAGLILGWQIRSWMLTGEWNPFPISRALALAHVERTAIYVTASVSERSSSLDFQTMYDWFLDLPAGGFLLAIAAVLLGFSIIGASVEKQFATTAK*
Ga0126377_121737451	3300010362	Tropical Forest Soil	MIALMATFLKIGARISAIGTLILAVLILGSQVTSWILTDEWNPFPISRALSLAHLECPAIYVTASTSDRPSSFDVQTIYDWLLDLPAGGFLLAVAAVLLGFSAIGASMEKQFATTEK*
Ga0126383_115814891	3300010398	Tropical Forest Soil	MNGAGGRMEPLFIRGITVWMATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNPFPISRALSLAHFERPAVYVTASVSDRPSSLDLQTMFDWFLDLPAGGFLFAVAAVLLGFSIIGASVEKQFTTTDK*
Ga0105246_118465271	3300011119	Miscanthus Rhizosphere	MTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVLLGFSVIGASLEKQF
Ga0137383_102606322	3300012199	Vadose Zone Soil	MEPLFTRVVLTAAMATFLKIAARISAIGTFILAGLILGWQVTSWIRTDEWNPIPISRALSLAHLDRTAIYVTASVSDSPPPSLDLQTIIYDWFLDLPAGGFLLAVAAVLLGFSFVGAFIEKQFVSTDK*
Ga0137382_100385075	3300012200	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDVQTISDWFLDLPAGGFLLAVAAVLLSFSVIGAFVEK
Ga0137380_113093551	3300012206	Vadose Zone Soil	MTASLATFLKIAARISAIGTIILAGLILGWQVTSWIRTDEWNPFPISRALSLAHLERAAIYVTASVSDRPPASLDVQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATPDK*
Ga0137380_116495031	3300012206	Vadose Zone Soil	MEPLFTRVDTASMATFLKIAARISAIGTFILAGLILGWQVTSWISTDEWNPFPISRALSLAPLERTAIYVTASVSDRPPPSSDVQTISDWFLDLPAGGFLLAVAAV
Ga0137381_103577751	3300012207	Vadose Zone Soil	MEPLFTRVDTASMATFLKIAARISAIGTFILAGLILGWQVTSWISTDEWNPFPISRALSLAPLERTAIYVTASVSDRPPPSSDVQTISDWFLDLPAGGFLLAVAAVLLSFSVIGASVEKQFATTDE*
Ga0137376_104100082	3300012208	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLILGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATPDK*
Ga0137379_107679411	3300012209	Vadose Zone Soil	SAIGTFILAGLILGWQVTSWIRTDEWNPIPISRALSLAHLDRTAIYVTASVSDSPPPSLDLQTIIYDWFLDLPAGGFLLAVAAVLLGFSVVGAFIEKQFATTDK*
Ga0137378_105248141	3300012210	Vadose Zone Soil	MEPLFTRVDTASMATFLKIAARISAIGTFILAGLILAWQVTSLIRTDEWNPIPISRALSLAHLDRTAIYVTASVSDSPPPSLDLQTIIHDWFLDLPA
Ga0137387_105636672	3300012349	Vadose Zone Soil	FLKIAARISAIGTFILAGLILGWQVTSWISTDEWNPFPISRTHSLAPLERTAIYVTASVSDRPPPSSDVQTISDWFLDLPAGGFLLAVAAVLLSFSVIGASVEKQFATTDE*
Ga0137387_112697481	3300012349	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLILGWQVTSWIRTDEWDPLPISRALSVAHLERPAIYVIASVSDRPSSLDVQKISDWFLDLPAGGFLLAVAAV
Ga0137386_107870952	3300012351	Vadose Zone Soil	MGQGERMGPLFARVHTASMATFLKIAARISAIGTFILAGLILGWQATSWIRTDEWNPIPISRALSLAHLDRTAIYVTASVSDSPPPSLDLQTIIYDWFLDLPAGGFLLAVAAVLLGFSVVGAFIEKQFATTDK*
Ga0137384_106968842	3300012357	Vadose Zone Soil	MEPLFTRVVLTAAMATFLKIAARFSAIGTFILAGLILGWQVTSWIRTDEWNPIPISRALSLAHLDRTAIYVTASVSDSPPPSLDLQTIIYDWFLDLPAGGVLLAVAAVLLGFSVFGAFI*
Ga0137385_113177051	3300012359	Vadose Zone Soil	MEPLFTRVVLTAAMATFLKIAARFSAIGTFILAGLILGWQVTSWISTDEWNPFPISRALSLAPLERTAIYVTASVSDSPPPSLDLQTIIYDWFLDLPAGGFLLAVAAVLLGFSVVGAFIE
Ga0137375_102145702	3300012360	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLILGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASVSDRPPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATTDK*
Ga0150984_1144071341	3300012469	Avena Fatua Rhizosphere	MTALMATFLKIAARISAIGTLILAVLILGSQVRWWLLTDEWDSFPISRALSLAHLERPAIYVTASVSDRPPPSLDLQAVSDWFLDLPAGGFLLAVAAVLLGFSIVGASMEKRFATTGK*
Ga0137358_105751041	3300012582	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASVSDRPPPSLDAQTISDWFLDLPAGGFLMAVAAVLLGFSIIGASVEK
Ga0137398_103936672	3300012683	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAV
Ga0137397_100716464	3300012685	Vadose Zone Soil	MKPLFTRVHIASMATFLKISARISAIGTVILAGLIVGWQVTSWILTDDWNPFPISRALSLAHLERPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLLAVAAVLLSFSRVGASMEKQFDTTDE*
Ga0137413_111681152	3300012924	Vadose Zone Soil	MEPLFTRVDTASMATFLKIAARISAIGTFILAGLILGWQVTSWISTDEWNPFPISRALSLERTAIYVTASVSDRPPPSLDFQTISDWFLDLPAGGFLLAAAAVLLGFSVVGAFIEKQFATADK*
Ga0137419_101566882	3300012925	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRSDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATPDK*
Ga0137416_117293152	3300012927	Vadose Zone Soil	MGQGERMGPLFARVNTASMATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWGPLPISRALSLAQLERAAIYVTASATASPPSLDVQTISDWFLDLPAGGFLLAVAAVLLSFSVI
Ga0137407_102250142	3300012930	Vadose Zone Soil	MEPLFTRVHIASMATFLKISARISAIGTVVLAGLIVGWQVTSWVLTDDWNPFPISRALSLAHFERPAIYVTASVSDRPPPSFDFQAMCDWFLDLPAGGFLLAVAAVLLSFSRVGASIEKQFHTTDE*
Ga0137407_112415622	3300012930	Vadose Zone Soil	MGQGERMGPLFARVNTATMATFLKIAARISAIGTFILAGLILGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTAGVSDRPPPSLDAQTISDWFLDLPAGG
Ga0126375_106371601	3300012948	Tropical Forest Soil	MEPFFTRDITAWMATFLKIAARIAAIGTLLLAVLILGSQVMSWILTDEWNPFPISRALALAHVERPAIYVTASTSDRPSSLDDQALYEWFLDLPAGGFLLA
Ga0126375_107912742	3300012948	Tropical Forest Soil	MATFLKIAARIAAIGTLLLAGLILGSQVTSWILTDDWNRFPISRALSLAHFERPTVYVTASVSDRPSSLGVQTIYDWFLDLPAGGFLFAVAAVLLGFSIIGASIEKQFTTTDK*
Ga0126375_108491832	3300012948	Tropical Forest Soil	MEPLFARGITVWMATFLKIAARIAAIVTLLLAGVILGSQVTSWILTDEWNPFPISRALALAHLERTAIYVTASVSDRSSSLDVQTICDWFLD
Ga0126375_116365801	3300012948	Tropical Forest Soil	MTALMATFLKIGARISAIGTFILAGLILGSQISSWILTDEWNPFPISKALALAHIERTVIYVTASASDSSSSFDVQAIYDWFLDLPAGGFLLAVAAMLLGFSLIGASVEKQFATTAK*
Ga0164299_112097702	3300012958	Soil	MRVDIASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVLLGFSVIGASLEKQFAPTDK*
Ga0126369_117646212	3300012971	Tropical Forest Soil	MAPLFTRVNVASMAAFLKIAACISAIGTGILAGVILGWQVISWFLTNEWDQFPISRALSLAHLERPAIYVTASASDRPPPSLDFQMIYDWFLNLPAGGFLLAVAA
Ga0126369_128628311	3300012971	Tropical Forest Soil	VLPLRLTVIKLWALAWVQRNNAHNMSTLARMMGQGGAMEPFFARLTIASMATFLKIVARLSAIVTFILAGLILGWQITSWILTDEWNSFPISRALSLAHLECPAIYVTASVSDRPSSFDIQTIYEWLLDLPAGGFLLAVAAVLVGFSAIGASMEKQFAA
Ga0157375_109027631	3300013308	Miscanthus Rhizosphere	MTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVLLGFSVIGASLEKQFAPTDKSLTSCSIQRRVCPRPDYPAPNIPA
Ga0157379_110452191	3300014968	Switchgrass Rhizosphere	MTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLL
Ga0137418_103283661	3300015241	Vadose Zone Soil	MESLFTRVNAASMATFLKIAARISAIGTFILGGLIVGWQVTSWIGTDEWSPFPISRALSLAHLERPAIYVTASVSDGPRPSLDFQMICDWLLDLPAGGFLLAVAAVLLGFSIIGTSVEKQFATIDK*
Ga0137418_108294491	3300015241	Vadose Zone Soil	MGQGERMGPLFARVNTASMATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATPDK*
Ga0184635_103216381	3300018072	Groundwater Sediment	MQPLFTRVHIASMATFLKISARISAIGTVMLAGLIVGWQVTSWILTDDWNPFPISRALSLAHLEGPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLLAVAAVLLS
Ga0179594_104208871	3300020170	Vadose Zone Soil	TFLKIAARISAIGTFILAGLILGWQVTSWISTDEWNPFPISRALSLERTAIYVTASVSDRPPPSLDFQTISDWFLDLPAGGFLLAAAAVLLGFSIIGAFIERQFATSEK
Ga0222622_100486132	3300022756	Groundwater Sediment	MQPLFTRVHIASMATFLKISARISAIGTVILAGLIVGWQVTSWILTDDWNPFPISRALSLAHLDGPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLLAVAAVLLGFSMMGASVEKQHDVS
Ga0207676_117866611	3300026095	Switchgrass Rhizosphere	MTASMATFLKIVARLSAIGTFILAGVILGWQVTSWILTHEWNSFPISTALSLAHFERTAIYVTASVSDSPPPSLDLQTIYDWFLDLPASGFLLVVAAVLLGFSVIGASLEKQFAPTDK
Ga0257152_10244381	3300026369	Soil	VILAGLIVGWQVTSWILTDDWNPFPISRALSLAHLERPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLLAVAAVLLSFSRVGASMEKQFDTTDE
Ga0257164_10897461	3300026497	Soil	MKPLFTRVHIASMATFLKISARISAIGTVILAGLIVGWQVTSWILTDDWNPFPISRALSLAHLERPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLLAVAAVLLSFSRVGASMEKQFDTT
Ga0209179_10471632	3300027512	Vadose Zone Soil	ISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATPDK
Ga0209106_11321151	3300027616	Forest Soil	MESLFTRVNAASMATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQRISDWFLDLPAGG
Ga0209177_101982872	3300027775	Agricultural Soil	FTRVVMTAWMATFLKIVARLSAIGTFILAGVIVGWQVTFWILTDEWNSFPISRALSLAHFERTAIYVTASVPDNPPPSLDLQTIYDWFLDLPASGFLLVVAAVLSAFSLIGASLAKQFAATDK
Ga0209488_100007189	3300027903	Vadose Zone Soil	MATFLKIAARISAIGTFILAGLIVGWQVTSWIRTDEWDPLPISRALSLAQLERAAIYVTASATASPPSLDAQTISDWFLDLPAGGFLLAVAAVLLGFSVIGAFIEKQFATPDK
Ga0207428_103058442	3300027907	Populus Rhizosphere	MEPLFTRVVSTASMAIFLKIAARISAIGTLILAGLILGWQVTSWILTDEWEPFPISRALSLAHIERPVIYVTASVSDKPSSFDVQTIYDWFLDLPAGAFLLAVAAVLLGFSILGASVERQFHTTDN
Ga0137415_100481346	3300028536	Vadose Zone Soil	MGPLFARVNTASMATFLKIAARISAIGTFILAGLILGWQVTSWISTDEWNPFPISRALSLAHLERPAIYVTASVSDRPSSLDVQKISDWFLDLPAGGFLLAVAAVLLSFSVVGAFIEKQFATTDK
Ga0307504_103799621	3300028792	Soil	MEPFITRVNTASMATFLKIAALISASGTLILAALILGWQVTSWIGTDEWNPFPISRALSLAHVERPAIYVTASVSDRPPPSLDVQAIYDWFL
Ga0307296_104617691	3300028819	Soil	MEPLFTRVHIASMATFLKISARISAIGTVILAGLIVGWQVTSWILTDDWNPFPISRALSLAHFERPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLLAVAAVLLSFSRVGASMEKQFHT
Ga0307286_103340701	3300028876	Soil	MEPLFTRVHIASMATFLKISARISAIGTVMLAGLIVGWQVTSWILTYDWNPFPISRALSLAHLERPAIYVTASVSDRPPPSFDFQAICDWFLDLPAGGFLL
Ga0307499_100632882	3300031184	Soil	SMATFLKIVARLSAIGTFILAGVILGSQVTSWILTDEWNSFPISRALTLAHFERPAIYVTASVSDSPPPSLDLQTIYDWFLDLPAGGFLLVVAAVLLGFSVVGASLEKQFAPTDK
Ga0307500_100534342	3300031198	Soil	MATFLKIVARLSAIGTFILAGVILGSQVTSWILTDEWNSFPISRALTLAHFERPAIYVTASVSDSPPPSLDLQTIYDWFLDLPAGGFLLLVAAVLLGFSVVGASLEKQFAPTDK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094211

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences