Metagenome / Metatranscriptome Family F094184

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094184
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	81 residues
Representative Sequence	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD
Number of Associated Samples	85
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.68 %
% of genes near scaffold ends (potentially truncated)	16.98 %
% of genes from short scaffolds (< 2000 bps)	75.47 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.151 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.698 % of family members)
Environment Ontology (ENVO)	Unclassified (25.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.09% β-sheet: 29.09% Coil/Unstructured: 51.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.67.1.0: automated matches	d4e1oa1	4e1o	0.60844
c.87.1.10: UDPGT-like	d2vcha_	2vch	0.60709
d.183.1.1: Major capsid protein gp5	d2fsya1	2fsy	0.60478
c.119.1.0: automated matches	d4x9xa_	4x9x	0.6029
d.79.4.1: PurM N-terminal domain-like	d1t3ta4	1t3t	0.60183

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF05834	Lycopene_cycl	35.85
PF03055	RPE65	14.15
PF01593	Amino_oxidase	2.83
PF07721	TPR_4	1.89
PF13340	DUF4096	1.89
PF04116	FA_hydroxylase	1.89
PF09107	SelB-wing_3	0.94
PF00535	Glycos_transf_2	0.94
PF07364	DUF1485	0.94
PF07715	Plug	0.94
PF11295	DUF3096	0.94
PF01527	HTH_Tnp_1	0.94
PF00144	Beta-lactamase	0.94
PF03949	Malic_M	0.94
PF13450	NAD_binding_8	0.94
PF13439	Glyco_transf_4	0.94
PF02518	HATPase_c	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	14.15
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	1.89
COG0281	Malic enzyme	Energy production and conversion [C]	0.94
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.94
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.94
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.94
COG5476	Microcystin degradation protein MlrC, contains DUF1485 domain	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.15 %
Unclassified	root	N/A	35.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.15 %
Unclassified	root	N/A	35.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.15 %
Unclassified	root	N/A	35.85 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.55 %
Unclassified	root	N/A	35.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.13 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.89 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.94 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.85 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.94 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.94 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.85 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.94 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.94 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.85 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	0.94 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.94 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.94 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.94 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.94 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101710380	All Organisms → cellular organisms → Bacteria → Proteobacteria	769	Open in IMG/M
3300000559\|F14TC_101520641	Not Available	708	Open in IMG/M
3300000567\|JGI12270J11330_10056740	All Organisms → cellular organisms → Bacteria → Proteobacteria	2051	Open in IMG/M
3300002245\|JGIcombinedJ26739_100782914	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300004082\|Ga0062384_100909551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300004092\|Ga0062389_101548649	Not Available	846	Open in IMG/M
3300004092\|Ga0062389_101753264	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300004092\|Ga0062389_102187858	Not Available	727	Open in IMG/M
3300005171\|Ga0066677_10073584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1761	Open in IMG/M
3300005337\|Ga0070682_101617697	Not Available	560	Open in IMG/M
3300005338\|Ga0068868_100459940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1108	Open in IMG/M
3300005434\|Ga0070709_10940534	Not Available	685	Open in IMG/M
3300005435\|Ga0070714_101486975	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	662	Open in IMG/M
3300005445\|Ga0070708_100010246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7588	Open in IMG/M
3300005467\|Ga0070706_100063012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3426	Open in IMG/M
3300005533\|Ga0070734_10556045	Not Available	653	Open in IMG/M
3300005534\|Ga0070735_10018862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5014	Open in IMG/M
3300005537\|Ga0070730_10164996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1495	Open in IMG/M
3300005568\|Ga0066703_10809988	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005764\|Ga0066903_101557544	Not Available	1251	Open in IMG/M
3300005921\|Ga0070766_10585758	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300005921\|Ga0070766_10935349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300005921\|Ga0070766_11111523	Not Available	546	Open in IMG/M
3300006028\|Ga0070717_12094749	Not Available	509	Open in IMG/M
3300006176\|Ga0070765_100027581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4363	Open in IMG/M
3300006176\|Ga0070765_100320917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1435	Open in IMG/M
3300006893\|Ga0073928_10001728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40586	Open in IMG/M
3300009012\|Ga0066710_104909960	Not Available	500	Open in IMG/M
3300009698\|Ga0116216_10830996	Not Available	553	Open in IMG/M
3300010154\|Ga0127503_10701600	Not Available	500	Open in IMG/M
3300010339\|Ga0074046_10910723	Not Available	510	Open in IMG/M
3300010376\|Ga0126381_100300703	All Organisms → cellular organisms → Bacteria → Proteobacteria	2197	Open in IMG/M
3300010376\|Ga0126381_103324134	Not Available	634	Open in IMG/M
3300011269\|Ga0137392_10945147	Not Available	709	Open in IMG/M
3300012202\|Ga0137363_10155399	All Organisms → cellular organisms → Bacteria → Proteobacteria	1801	Open in IMG/M
3300012203\|Ga0137399_10330773	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300012205\|Ga0137362_10560245	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300012683\|Ga0137398_10919273	Not Available	609	Open in IMG/M
3300012927\|Ga0137416_11642406	Not Available	585	Open in IMG/M
3300012961\|Ga0164302_11480537	Not Available	558	Open in IMG/M
3300014169\|Ga0181531_10416585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300014199\|Ga0181535_10439118	Not Available	760	Open in IMG/M
3300014495\|Ga0182015_10010330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8543	Open in IMG/M
3300014501\|Ga0182024_10005280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29065	Open in IMG/M
3300014501\|Ga0182024_10008071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22402	Open in IMG/M
3300014501\|Ga0182024_10122880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3709	Open in IMG/M
3300014501\|Ga0182024_10210990	Not Available	2643	Open in IMG/M
3300017822\|Ga0187802_10442832	Not Available	516	Open in IMG/M
3300017970\|Ga0187783_10119551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1941	Open in IMG/M
3300017972\|Ga0187781_10059210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	2636	Open in IMG/M
3300017972\|Ga0187781_10289243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1162	Open in IMG/M
3300017975\|Ga0187782_10401065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1042	Open in IMG/M
3300018085\|Ga0187772_11317039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	535	Open in IMG/M
3300019888\|Ga0193751_1015183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3932	Open in IMG/M
3300020580\|Ga0210403_10447649	All Organisms → cellular organisms → Bacteria → Proteobacteria	1052	Open in IMG/M
3300021170\|Ga0210400_10551204	All Organisms → cellular organisms → Bacteria → Proteobacteria	951	Open in IMG/M
3300021171\|Ga0210405_10597836	Not Available	859	Open in IMG/M
3300021171\|Ga0210405_10939499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	655	Open in IMG/M
3300021181\|Ga0210388_10348451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300021181\|Ga0210388_11321346	Not Available	608	Open in IMG/M
3300021401\|Ga0210393_10035203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3918	Open in IMG/M
3300021402\|Ga0210385_10204973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1435	Open in IMG/M
3300021403\|Ga0210397_10056899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2525	Open in IMG/M
3300021403\|Ga0210397_11112453	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300021404\|Ga0210389_10398200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300021407\|Ga0210383_10064232	All Organisms → cellular organisms → Bacteria → Proteobacteria	3065	Open in IMG/M
3300021420\|Ga0210394_10006615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12503	Open in IMG/M
3300021432\|Ga0210384_10151183	Not Available	2083	Open in IMG/M
3300021432\|Ga0210384_10339788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1352	Open in IMG/M
3300021432\|Ga0210384_11813381	Not Available	516	Open in IMG/M
3300021433\|Ga0210391_10416450	Not Available	1054	Open in IMG/M
3300021477\|Ga0210398_10000594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40519	Open in IMG/M
3300021559\|Ga0210409_10325713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1382	Open in IMG/M
3300022525\|Ga0242656_1130625	Not Available	516	Open in IMG/M
3300022557\|Ga0212123_10001061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	80503	Open in IMG/M
3300022722\|Ga0242657_1138266	Not Available	632	Open in IMG/M
3300025929\|Ga0207664_11372533	Not Available	627	Open in IMG/M
3300026527\|Ga0209059_1092723	All Organisms → cellular organisms → Bacteria → Proteobacteria	1254	Open in IMG/M
3300027521\|Ga0209524_1128112	Not Available	528	Open in IMG/M
3300027583\|Ga0209527_1024949	All Organisms → cellular organisms → Bacteria → Proteobacteria	1330	Open in IMG/M
3300027610\|Ga0209528_1011598	All Organisms → cellular organisms → Bacteria → Proteobacteria	1907	Open in IMG/M
3300027660\|Ga0209736_1070694	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300027854\|Ga0209517_10068715	All Organisms → cellular organisms → Bacteria → Proteobacteria	2530	Open in IMG/M
3300027903\|Ga0209488_10280926	All Organisms → cellular organisms → Bacteria → Proteobacteria	1245	Open in IMG/M
3300027986\|Ga0209168_10051987	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300028906\|Ga0308309_10640447	Not Available	923	Open in IMG/M
3300030973\|Ga0075395_11234059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	634	Open in IMG/M
3300031057\|Ga0170834_105321175	Not Available	599	Open in IMG/M
3300031234\|Ga0302325_10390216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2178	Open in IMG/M
3300031234\|Ga0302325_10587385	Not Available	1646	Open in IMG/M
3300031234\|Ga0302325_11107628	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300031236\|Ga0302324_102809913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300031474\|Ga0170818_102235333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1010	Open in IMG/M
3300031525\|Ga0302326_11317422	Not Available	983	Open in IMG/M
3300031525\|Ga0302326_12244830	Not Available	695	Open in IMG/M
3300031708\|Ga0310686_118952394	Not Available	597	Open in IMG/M
3300031715\|Ga0307476_10332537	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300031715\|Ga0307476_10374836	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300031754\|Ga0307475_10159229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1796	Open in IMG/M
3300031941\|Ga0310912_11095888	Not Available	609	Open in IMG/M
3300032180\|Ga0307471_101770883	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300032892\|Ga0335081_12691189	Not Available	508	Open in IMG/M
3300032895\|Ga0335074_10030833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7515	Open in IMG/M
3300032895\|Ga0335074_10033186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7222	Open in IMG/M
3300032896\|Ga0335075_10524632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1201	Open in IMG/M
3300032896\|Ga0335075_11253995	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.62%
Aquatic	Environmental → Aquatic	9.43%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.96%
Freshwater	Environmental → Aquatic → Freshwater	7.55%
Peat	Environmental → Terrestrial → Peat	5.66%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.06%
Loam	Environmental → Terrestrial → Soil → Loam	19.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.66%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.66%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.77%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.94%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.94%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017103802	3300000364	Soil	VPEIEIELEPIAEGQAELAREIGQLEAGGKRILXIRYPGWAADDLGIIPDAQTANAGTYGPHRATQYTQPYPGRVAIIVYQD*
F14TC_1015206411	3300000559	Soil	MPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIVPDAQTANAGTYGPHRATQYTQPYPGRVAIIVYXD*
JGI12270J11330_100567402	3300000567	Peatlands Soil	MPEIQIELEPIAEGQAELAREIGQLEVDGKRILDIRYPGWAADDLGIIPDAQTGDGGTYGPHRATRYTQSDPGRVAIIVYQD*
JGIcombinedJ26739_1007829141	3300002245	Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPDWAADDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD*
Ga0062384_1009095512	3300004082	Bog Forest Soil	MPQIEIRLEPIAEGQAELAREVGQLEADGKHILDIRYPGWAADDLGIITDAQSGNAGTYGAYRATQYTQPSPGEVAIIVYKD*
Ga0062389_1015486491	3300004092	Bog Forest Soil	MPQIEIRLEPIAEGQAELAREVGQLEADGKRIVDIRYPGWAAYDLGIITDAQSGNTGTYGTHRATQYTQPYPGEVVIIIYKD*
Ga0062389_1017532642	3300004092	Bog Forest Soil	MPKIEIELEPIAEGQAELAREVGQLEAKGKRILDIRYPGWAAEDLGITPDAQTGNTGAYGIHRATQYTE
Ga0062389_1021878581	3300004092	Bog Forest Soil	MPQIEIRLEPIAEGQAELAREVGQLEADGKHILDIRYPGWAADDLGIITDAQSGNAGTYGAHRATQYTQPSPGEVAIIIYKD*
Ga0066677_100735842	3300005171	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWATDDLGIIPDAQTGNAGTYGAHRATQYTQPYPGGVAIIVYQD*
Ga0070682_1016176972	3300005337	Corn Rhizosphere	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAAEDLGIIPDAQTGNAGTYGVHRATQYIQPYPGRVAIIVHQD*
Ga0068868_1004599401	3300005338	Miscanthus Rhizosphere	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAAEDLGIIPDPQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD*
Ga0070709_109405341	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPSWAAEDLGIIPDAQTGNAGTYGVHRATQYIQPYPGRVAIIVHQD*
Ga0070714_1014869753	3300005435	Agricultural Soil	QAELAREIGQLEAEGKRILDIRYPGWAAEDLGIIPHAQTGNAGTYGVHRATQYIQPYPGRVAIIVHQD*
Ga0070708_1000102464	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTANAGTYGPHRATQYTQPYPGRVAIIVYQD*
Ga0070706_1000630122	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTANAGTYGPHRATQYTQPYPGRVAIIVYQD*
Ga0070734_105560451	3300005533	Surface Soil	MPEIQIELEPIAEGQAELAREIGQLEVDGKRILDIRYPGWAADDLGIVPDAQTGNGGTYGPHRATRYTQPDPGRVAIIVYQD*
Ga0070735_100188624	3300005534	Surface Soil	MPQIEVALEPIAVGQAELAREVGQLEADGKRILDIRYPGWAAEDLGIIVDTPAGDTGTYGTHRATQQTQPSAGNIAIIVYQD*
Ga0070730_101649961	3300005537	Surface Soil	MPEIEIALEPIAEGQAELAREVGQLEAEGKRILDIRYPGWAADDLGIIPDAHAGNAGTYGVHRATQYTQPYPGRVAIIVYQD*
Ga0066703_108099882	3300005568	Soil	RRIRRASTPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWATDDLGIIPDAQTGNAGTYGAHRATQYTQPYPGGVAIIVYQD*
Ga0066903_1015575441	3300005764	Tropical Forest Soil	MPEIEISLEPIAEGQAELAREIGQLESDGKRILEIRYPFWAADDLGIVADPQTTNAGTYGPHRATQTAQPYPGGVAIIVYQD*
Ga0070766_105857581	3300005921	Soil	MPQIEIELEPIAEGQAELAREVGQLEAGGKRILGIRYPGWAADDLGIIFDAQTGNAGTYGAYRATEYTQTL
Ga0070766_109353492	3300005921	Soil	SEIPPCPKSRFRPSRSLEGQAELARALGHLEADGKCILDIRYPGWAASDLGIVLGTGNAETYGSYHAIQHMRPSPGSDAIIVYQD*
Ga0070766_111115232	3300005921	Soil	MPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGPHRATQYTQPDPGRVAIIVYQD*
Ga0070717_120947491	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGPHRATQYTQPYPGRVAIIVYQD*
Ga0070765_1000275813	3300006176	Soil	MPQIEIELEPIAEGQAELAREVGQLEAGGKRILGIRYPGWAADDLGIIFDAQTGNAGTYGAYRATEYTQTLPRQVVIIVYQD*
Ga0070765_1003209172	3300006176	Soil	MPQIEIRLEPIAEGQAELAREVGQLEADGKHILDIRYPGWAADDLGIITDAQSGNAGTYGAHRATQYTQPFPGEVAIIIYND*
Ga0073928_1000172826	3300006893	Iron-Sulfur Acid Spring	MPQIEIQLEPIAEGQAELAREVGQLEADGKRILDIRYPGWAADDLGIIPDPRTCNAGTYGPHRATEYTQPSPGSTAIIVYQE*
Ga0066710_1049099602	3300009012	Grasslands Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWATDDLGIIPDAQTGNAGPYGAHRATQYTQPYPGGVAIIVYQD
Ga0116216_108309962	3300009698	Peatlands Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKHILDIRYPGWAADDLGIIRDAQTSNAGTYGAYRATQYTQPYPGLVAIIVYQD*
Ga0127503_107016001	3300010154	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIILDAQTGNAGTYGAHRATQYKQPYPGRVAIIVYQD*
Ga0074046_109107231	3300010339	Bog Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGCAADDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD*
Ga0126381_1003007032	3300010376	Tropical Forest Soil	MPQIEIALEPIAVGQAELAREIGQLEADGKRILDIRYPSWAAEDLGILIDTPTSDTGTYGTYRATQHTRPFPGNVAIIVYQD*
Ga0126381_1033241341	3300010376	Tropical Forest Soil	MHEIEIEVEPIAEGQAELAREIGQLEAEDKHILDIRYPVWAAGDLGIIPDAQTGNAGTYGAHRATQCS*
Ga0137392_109451472	3300011269	Vadose Zone Soil	MPEIEIELEPIAEGQAELAREIGQLEADGKRILDIRYPDWAADDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD*
Ga0137363_101553994	3300012202	Vadose Zone Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGAHRATQYTEPHPGRVAIIVYQD*
Ga0137399_103307731	3300012203	Vadose Zone Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAVEDLGIILDAQTGNAGTYGVHRATQYTQPYPGRVAIIVYQD*
Ga0137362_105602452	3300012205	Vadose Zone Soil	MPEIEIELEPIAEGQAELAREIGQLEADGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGAHRATQYTEPHPGRVAIIVYQD*
Ga0137398_109192731	3300012683	Vadose Zone Soil	MPEIEIELEPIAEGQTDLAREIRQLEAEGKRILDMRYPGWAAEDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD*
Ga0137416_116424061	3300012927	Vadose Zone Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAVEDLGIILDAQTGNAGTYGAHRATQYTEPHPGRVAIIVYQD*
Ga0164302_114805371	3300012961	Soil	MPEIEIELEPIAEGQAELAREIGQLEAKGKRILDIRYPGWAAEDLGIIPDAQTGNGGTYGAQRATQYTQPYPGRVAIIVYQD*
Ga0181531_104165852	3300014169	Bog	MPQIVIELEPIAVGQAELAREVGQLEAEGKRILDIRYPGWAADDLGIIRDAGASDSGAYGAHRATQYTQPVPGRVAIILYQD*
Ga0181535_104391181	3300014199	Bog	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIIPDTQTGNSGTYGPHRATQYTQPYRGRVAIIVYQD*
Ga0182015_100103302	3300014495	Palsa	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIITDAQAGDAGTYGTHRATQYTEPFPGRFAIIVYQE*
Ga0182024_1000528023	3300014501	Permafrost	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGVHRATQYTQPYPGRVAIIVYQD*
Ga0182024_1000807115	3300014501	Permafrost	MPEIEIELEPIAEGQAELAREVGQLEAEGKRILDIRYPGWAADDLGIIPNAGTGNAGTYGTYRATQYTQPFPGRVAIIVYQD*
Ga0182024_101228803	3300014501	Permafrost	MPQIEIQLEPIAEGQAELAREVGQLEAEGKRILDIRYPGWAADDLGIIRDAETGNTGTYGAHRATQYTQSFPGRVAIILYQD*
Ga0182024_102109902	3300014501	Permafrost	MPQIEIPLEPIAEGQAELAREVGQLEAEGKRILDIRYPGWAADDLGIVRDVKTGNVGTYGAHRATQYTQPFPGEIAIILYQD*
Ga0187802_104428321	3300017822	Freshwater Sediment	MPEIEIELEPIAEGQAELAREVGQLEATGKRILDIRYPGWAADDLGITPDAQTGNAGTYGTHRATEYTEPYPGRVAVIVYQD
Ga0187783_101195512	3300017970	Tropical Peatland	MPQIEIALEPNAVGQAELAREIGQLEADGKRILHIQYPGWAAEDLGIVIDEPTGNGGTYGTYRATRYAGDVAIIVYQD
Ga0187781_100592103	3300017972	Tropical Peatland	MPQIEIELEPIAEGQAELAREVGQLEAEGKRILDIRYPAWAAEDLGIVRDAQASNAGTYGSHRATQ
Ga0187781_102892432	3300017972	Tropical Peatland	MPQIEIALEPIAVGQAELAREIGQLEFDGKRILDIRYPGWATEDLGIIIDTPTANTGTYGAYRATEHAANVAIIVYQD
Ga0187782_104010651	3300017975	Tropical Peatland	MPQIEIELEPIAEGQAELAREVGQLEAEGKRILDIRYPAWAAEDLGIVRDAQASNAGTYGSHRATQYTQPSPGSVAIIVYQD
Ga0187772_113170391	3300018085	Tropical Peatland	MPQIEIELEPIAEGQAELAREVGQLEAEGKRILDIRYPAWAAEDLGIVRDAQASNAVTYGSHRATQYTQPSPGSVAIIVYQD
Ga0193751_10151834	3300019888	Soil	MPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGPHRATQYTQPYPGRVAIIVYQD
Ga0210403_104476492	3300020580	Soil	MPQIEIELEPIAEGQAELAREVGQLEADGKRILDIRYPGWAADDLGIVPDAQAGNAGTYGTHRATQYTQPVPGQVAIIVYQD
Ga0210400_105512042	3300021170	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPDWAADDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD
Ga0210405_105978361	3300021171	Soil	MPEIEIELEPIAEGQAELAREVGQLEAEGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGIHRATQYTQPNPGRVAIIVYQD
Ga0210405_109394991	3300021171	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGPHRATQYTQPYPGRVAIIVYQD
Ga0210388_103484512	3300021181	Soil	MPQIEIPLDPIAEGQAELAREVGQLEAEGKRILDIRYPDWAADDLGIIPDAQTGNTGTYGAHRATQHTQSLPCGVAIIVYQD
Ga0210388_113213461	3300021181	Soil	MPEIEIELEPIAEGQAELAREVGQLEAKGKRILDIRYPGWAADDLGITPDAQSGNAGTYGTHRATQYTEPDPGRVAIIVYQD
Ga0210393_100352032	3300021401	Soil	MPEIEIRLEPIAEGQAELAREVGQLEADGKHIVDIRYPGWAADDLGIIAGAQSGSAGTYGVHRATQYAEPYPGEVAIIVYKD
Ga0210385_102049732	3300021402	Soil	MPEIEIELEPIAEGQAELAREVGQLEFEGKRILDIRYPGWAADDLGIVPDARCGNAGTYGTYRATQYTQPSPGRVAIIVYQD
Ga0210397_100568991	3300021403	Soil	EGQAELAREVGQLEADGKHIVDIRYPGWAADDLGIIAGAQSGSAGTYGVHRATQYAEPYPGEVAIIVYKD
Ga0210397_111124532	3300021403	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPDWAADDLGIIPDAQTGNAGTYGAHRATQYTEPHPGRVAIIVYQD
Ga0210389_103982001	3300021404	Soil	MPEIEIELEPIAEGQAELARDIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTSNAGTYGPHRATQYTQPYPGRVAIIVYQD
Ga0210383_100642323	3300021407	Soil	MPEIEIRLEPIAEGQAELAREVGQLEADGKHIVDIRYPGWAADDLRIIAGAQSGSAGTYGVHRATQYAEPYPGEVAIIVYKD
Ga0210394_100066159	3300021420	Soil	MPEIEIELEPIAEGQAELAREIGQLEADGKRILDIRYPGWAAEDLGIILDAQTGNAGTYGAYRATQYTQPYPGLVAIIVYQD
Ga0210384_101511831	3300021432	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPDWAAGDLGVIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD
Ga0210384_103397881	3300021432	Soil	MPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGPHRATQYTQPDPGRVAIIVYQD
Ga0210384_118133811	3300021432	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRSPGWAAEDLGIIPDAQTGNAGTYCAHRATQYTQPYPGRVAIIVYQD
Ga0210391_104164502	3300021433	Soil	MPQIEIELEPIAEGQAELAREVGQLEAGGKRILGIRYPGWAADDLGIIFDAQTGNAGTYGAYRATEYTQTLPRQVVIIVYQD
Ga0210398_1000059414	3300021477	Soil	MPEIEIELEPIAEGQAELAREVGQLEAAGKRILDIRYPGWAADDLGITPDGQAGNAGTYGTHRATQYTEPYPGRVAIIVYQD
Ga0210409_103257133	3300021559	Soil	VPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTANAGTYGPHRATQYTQPYPGRVAIIVYQD
Ga0242656_11306251	3300022525	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGITPDAQRGNAGTYGTHRATQYTEPYPGRVAIIVYQD
Ga0212123_1000106115	3300022557	Iron-Sulfur Acid Spring	MPQIEIQLEPIAEGQAELAREVGQLEADGKRILDIRYPGWAADDLGIIPDPRTCNAGTYGPHRATEYTQPSPGSTAIIVYQE
Ga0242657_11382662	3300022722	Soil	MPEIEIELEPIAEGQAELAREVGQLEAEGKRILDIRYPDWAADDLGIIPDARTGSAGTYGAHRATQYTEPHPGRVAIIVYQD
Ga0207664_113725331	3300025929	Agricultural Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAAEDLGIIPHAQTGNAGTYGVHRATQYIQPYPGRVAIIVHQD
Ga0209059_10927231	3300026527	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWATDDLGIIPDAQTGNAGTYGAHRATQYTQPYPGGVAIIVYQD
Ga0209524_11281121	3300027521	Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDTQTGNAGTYGPHRATQYTQPDPGRVAIIVYQD
Ga0209527_10249492	3300027583	Forest Soil	MPEIGIELEPIAEGQAELAREIGQLEAEGKRILDIRSPGWAAEDLGIIPDAQTGNAGTCGAHRATQYTQPYPGRVAIIVYQD
Ga0209528_10115981	3300027610	Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEVEGKRILDIRYPGWAADDLGIIPDTQTGNAGTYGPHRATQYTQPDPGRVAIIVYQD
Ga0209736_10706942	3300027660	Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEVEGKRILDIRYPGWAADDLGIIPDAQTGNGGTYGPHRATQYTQPDPGRVAIIVYQD
Ga0209517_100687152	3300027854	Peatlands Soil	MPEIQIELEPIAEGQAELAREIGQLEVDGKRILDIRYPGWAADDLGIIPDAQTGDGGTYGPHRATRYTQSDPGRVAIIVYQD
Ga0209488_102809262	3300027903	Vadose Zone Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGAHRATQYTEPHPGRVAIIVYQD
Ga0209168_100519871	3300027986	Surface Soil	MPQIEVALEPIAVGQAELAREVGQLEADGKRILDIRYPGWAAEDLGIIVDTPAGDTGTYGTHRATQQTQPSAGNIAIIVYQD
Ga0308309_106404471	3300028906	Soil	LEPIAEGQAELAREVGQLEAKGKRILDIRYPGWAADDLGITPDAQRGNAGTYGTHRATQYIEPYPGRVAIIVYQD
Ga0075395_112340591	3300030973	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAAEDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD
Ga0170834_1053211752	3300031057	Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD
Ga0302325_103902162	3300031234	Palsa	MPQIEIPLEPIAEGQAELAREIGQLEADGKHILDIRYPGWAADDLGIVCDPQTCATGAYGIHRATQYGQPDAGEIVIIVYQEPSRC
Ga0302325_105873851	3300031234	Palsa	MPQIVIELEPIAVGQAELAREVGQLEAEGKRILDIRYPGWAADDLGIIRDAGASDSGAYGAHRATQYTQPVPGRVAIILYQD
Ga0302325_111076281	3300031234	Palsa	MPQIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDPQTSNAGTYGTYRATEYTQT
Ga0302324_1028099132	3300031236	Palsa	MPQIEIPLEPIAEGQAELAREIGQLEADGKHILDIRYPGWAADDLGIVCDPQTCATGAYGIHRATQYGQPDAGEIVIIVYQD
Ga0170818_1022353331	3300031474	Forest Soil	PGPKSRFRPSRSPEGQAELARELGHLEADGKCILDIRYPGWAASDLGIVLGTGNAETYGSYHAIQHMRPSPGSDAIIVYQD
Ga0302326_113174221	3300031525	Palsa	SMPQIEIELEPIAEGQAELAREVGQLEAGGKRILDIRYPGWAADDLGIIPDARTGNAGTYGAHRATEYPQAFPRRVAIIVYQD
Ga0302326_122448302	3300031525	Palsa	IELEPIAEGQAELAREIGQLEANGKRILDIRYPDWAADDLGITLDLQTGNAGTYGTHRATQYTEPYPGRVAIIVYQD
Ga0310686_1189523942	3300031708	Soil	MPEIEIELEPIAEGQAELAREVGQLEATGKRILDIRYPGWAADDLGITPAQTGNTGTYGTHRATQYTEPCPGRVAVIVYQD
Ga0307476_103325372	3300031715	Hardwood Forest Soil	MPEIEIELEPIAEGQAELAREVGQLEAKGKRILDIRYPGWAADDLGITPDAQTGNAGTYGTHRATQYTEPYPGRVAIIVYQD
Ga0307476_103748362	3300031715	Hardwood Forest Soil	MPEIEIELEPIAEGQAELAREVGQLEAEGKRILDIRYPGWAADDLGITPDAQTGKCGTYGTHRATQYTEPDPGRVAIIVYQD
Ga0307475_101592293	3300031754	Hardwood Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEAGGKRILDIRYPGWAADDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD
Ga0310912_110958881	3300031941	Soil	MPEIEIELEPIAEGQAELAREIGQLEAEGKRILDIRYPGWAAEDLGIIPDAQTGNGGTYGPYRATQYTQPDPGRVAIIV
Ga0307471_1017708832	3300032180	Hardwood Forest Soil	MPEIEIELEPIAEGQAELAREIGQLEAESKRILDIRYPGWAAEDLGIIPDAQTGNAGTYGAHRATQYTQPYPGRVAIIVYQD
Ga0335081_126911891	3300032892	Soil	MPEIQIELEPIAEGQAELAREIGQLEVDGKRILDIRYPGWAADDLGIVPDAQTGNGGTYGPHRATRYTQPDPGRVAIIVYQD
Ga0335074_100308335	3300032895	Soil	MPEIEIELEPIAEGQAELAREVGQLEAKGKRILDIRYPAWAADDLGITPDAQTRNAGTYGTHRATQYTEPDPGRVAIIVYQD
Ga0335074_100331868	3300032895	Soil	MPQIEIALEPIAVGQAELAREVGQLEADGKRIVAIQYPGWAAEDLGIIADTPKGDTGTYGSHRATRHTQRSTGNIAIIVYQD
Ga0335075_105246322	3300032896	Soil	MPQIEIALEPIAVGQAELAREIGQLEADGKHILDIRYPGWAAEDLGIIVDAPTGNTGTYGTHRATRHAQPSTGDIAIIVYQD
Ga0335075_112539951	3300032896	Soil	MPEIEIELEPIAEGQAELAREVGQLEAKGKRILDIRYPAWAADDLGITPDAQTRNAGTYGTHRATQYTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094184

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences