Metagenome / Metatranscriptome Family F094032

Basic Information
Family ID	F094032
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	168 residues
Representative Sequence	LMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLAASHQWDAAGTPPGGTAGFIFLMRIPFKDILTGNERSVSTLMPGPKTTSVQSLYAGTSTLDFSSLWLDIASLSNNLYETEHEISAFGAVRADQIEGILVVRKPAAVP
Number of Associated Samples	88
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.094 % of family members)
Environment Ontology (ENVO)	Unclassified (27.358 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.396 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.55% β-sheet: 10.11% Coil/Unstructured: 80.34%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF12833	HTH_18	3.77
PF00487	FA_desaturase	2.83
PF02190	LON_substr_bdg	1.89
PF13091	PLDc_2	1.89
PF02353	CMAS	0.94
PF01906	YbjQ_1	0.94
PF01739	CheR	0.94
PF01562	Pep_M12B_propep	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.83
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.83
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	1.89
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.89
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.94
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.94
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.94

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.42%
Host-Associated	Host-Associated	23.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.92%
Plants	Host-Associated → Plants	23.58%
Aquatic	Environmental → Aquatic	8.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.66%
Freshwater	Environmental → Aquatic → Freshwater	4.72%
Roots	Host-Associated → Plants → Roots	3.77%
Marine	Environmental → Aquatic → Marine	2.83%
Sediment	Environmental → Aquatic → Sediment	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.34%
Loam	Environmental → Terrestrial → Soil → Loam	17.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.77%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.77%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.83%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.83%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300025573	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054787381	3300000364	Soil	GSLRSVSPGELVAEDRVDSRWSASLITKPDLGLMXVFSSSTGCTXAXLXPAQCPLXXRFYSMIDRHENFYQTFSALQPTYYGISSQPSPLVACSITLAASHQWDSAGTPPGGTAGFIFLMRIPFKDILTGNETSVSTLMPGPKTTSVQSLYAGTGHLDFSSLWLDVASLSNNQ
JGI10216J12902_1013988183	3300000956	Soil	QPSPLVACSITLTAAHHWDSAGIPSGGTAGFIFLMRIPFKDILTGNDVSVSTLMPGPKTTSIQSLYAGTGRMDFNSLWLDIASLSNNLYSSEHEISAFGAVAAGQIEGILVVRKPANVP*
Ga0055462_102784541	3300004015	Natural And Restored Wetlands	HENFYRTYSALSPDYYGISSQPSPLVACSITLAASHQWDTAGTPSGGTAGFIFLMRIPFKDILTGNDTSVATLMPGPKATSIQSLYAGTGHLDFNSLWLDIASLSNNLYQTEHEISAFGAVDAAQIEGILVIRKPAAVP*
Ga0062589_1003027302	3300004156	Soil	TSLRPDSASISSQPSPLVACSITLAAAHAWDSAGTPPGGSAGFIFLMRIPFKQILAGSETSVSTLRPGPDVLSIADLYAGDELDMNRVWLDIATLSHNLFASEHEISKFGAVPAEQIEGILVVRTPATMEE*
Ga0062589_1003493911	3300004156	Soil	LIDRHEDFYQTYTSLRPDSASISSQPSPLVACSITLAAAHQWDTAGTPPGGTAGFIFLMRIPFEQILAGSETSVATLEPGPDVLSIGDLYQGQELDMTKVWLDIATLSHNAFSSEHEISKFGAVPAEQIEGILVIRTPAAMDE*
Ga0062592_1011568091	3300004480	Soil	GLMSVFSSSTGCTSASLDPAQCPLMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLGASHQWDSAGTPSGGTAGFIFLMRIPFKDILTGNEKSVATIMPGPKTTSVQSLYAGTGHLDFSSLWLDVASLSNNQYANEHEISAFGAVRADQIEGILVIRKPAAVQ*
Ga0070683_1013216232	3300005329	Corn Rhizosphere	RFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLAAAHQWDTAGIPAGGTAGFIYLMKIPFKDILTGNETSVATLMPGPKTTSIQSLYNGTAKLDMTKAWLDVASLSNNQYETEHEISAFGVVPASEIEGILVIRKPAAVP*
Ga0070690_1013682691	3300005330	Switchgrass Rhizosphere	VDSDWDKALLADADMGLLSMFPDGSSCQSATIDPGACPLMQRFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFKQILAGSETSVATLMPGPQVTSLQSLYRDQSTTLNMNAAWLDIATLSNNQYATEHEISAFGIVPADEIEGILVIRKPAALP
Ga0068869_1007848752	3300005334	Miscanthus Rhizosphere	AVRSITPEKLVAADTVDPRWRGELLAGRDMGLMTMFADAAGCTAEAPTPAQCPLLQRFFSMIDRHENFYRTYSALTPDFSSISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFEEIVTGNQRSVATIMPGPETTSLQGLYAGTAQLDMARAWLDVASLSNNQFESEHEISAFGAVQPDEIEGILVIRRPAAVP*
Ga0070689_1001820241	3300005340	Switchgrass Rhizosphere	RFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFKEIVTGNQRSVATIMPGPETTSLQGLYAGTAQLDMARAWLDVASLSNNQFESEHEISAFGAVQPDEIEGILVIRRPAAVP*
Ga0070673_1011822262	3300005364	Switchgrass Rhizosphere	SMIDRHENFYRTYSALTPDFSSISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFKEIVTGNQRSVATIMPGPETTSLQGLYAGTAQLDMARAWLDVASLSNNQFESEHEISAFGAVQPDEIEGILVIRRPAAVP*
Ga0070703_104466061	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	SMIDRHENFYLTYSALNPDFSSVSSQPSPLVACSITLEAAHAWDTAGTPSGGRAGFIFLMRIPFKDVLTGNDRSVATVMPGPKTTSIQSLYNGSGGALDMSSLWLDVASLSNNQFESEHEISAFGAVRADQIEGILVVRKPAAVP*
Ga0070685_115231511	3300005466	Switchgrass Rhizosphere	FYQTFSALQPTYYGISSQPSPLVACSITLAASHAWDSAGTPPGGTAGFIFLMRIPFKDILTGNEKSVATIMPGPKTTSVQSLYAGTGSLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVIRKPAAVQ*
Ga0070706_1008393242	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	YYGISSQPSPLVACSITLAASHQWDAAGTPPGGSAGFIFLMRIPFKDILTGNERSVSTIMPGPLTTSVQSLYAGTGHLDFTSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVIRKPAAVP*
Ga0070707_1013471071	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IDRHENFYQTFSALQPTFYGISSQPSPLVACSITLAASHAWDAAGTPPGGTAGFIFLMRVPFKDILTGNEKSVSTIMPGPTTTSVQSLYAGTGHLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVVRKPAAVP*
Ga0070707_1016749591	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EFTGNLKFQPMSGSLRTVAPQDLVAEDTVDSRWNKSYLTKPDMGLMDVFSSSTGCTGATIDEAACPLMRRFYSMIDRHENFYHTYSALTPSYYGVSSQPSPLVACSITLAAAHQWDTAGIPPGGTAGFIFLMRVPFKDILTGNEVSVSTLMPGPKTTSIQSLYAGTGRMDFNSLWLDIASLSNNLYANEHEISAFGSVAAG
Ga0070707_1020817901	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LKFQPTTGTLRSVSPGEIAATDTVDSRWSASFLTKPDMGLMSVFSSSTGCTGATLDPAQCPLMRRFYSMIDRHENFYQTFSALQPTYYGISSQPSPLVACSITLAASHAWDSAGTPPGGTAGFIFLMRIPFKDILTGNDRSVSTIMPGPKTTSIQSLYAGTGRMDFSSLWLDIASLS
Ga0070698_1016078271	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	YGISSQPSPLVACSITLEAAHAWDTAGTPSGGRAGFIFLMRIPFKDILTGNDRSVSTVLPGPKTTSIQSLYGGGGELDMSSLWLDVASLSNNQFESEHEISAFGAVRADQIEGILVVRKPAAVP*
Ga0070697_1002416521	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	NKDMGLTSVFSNPMGCTGATIDPAQCPLMQRFFSMIDRHENFYRTYSALNPDFSSISSQPSPLVACSITLEAAHAWDTAGTPSGGRAGFIFLMRIPFKDILTGNDRSVSTVMPGPKTTSIQSLYGGGGELDMSSLWLDVASLSNNQFESEHEISAFGAVRADQIEGILVVRKPAAVP*
Ga0070697_1015396211	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	WNAERLGDKDMGLMAVFASSTGCTGPSIDRAQCPLMQRFSSMIDRHESFDRTYSALAPDYNDISSQPSPLVASSITLPPPGGSAGFIFLMRIPFTDIVTGNDNSVATLMPGPKTTSIQSLYAGTGKLDVASMWLDIASLSNNKYATGREIAAFGAVPANEIEGILVVRKPAAAP*
Ga0070686_1018886921	3300005544	Switchgrass Rhizosphere	RFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFKQILAGSETSVATLMPGPQVTSIQSLYRDQSTTLNMNAAWLDIATLSNNQYATEHEISAFGIVPADEIEGILVIRKPAAVQ*
Ga0070696_1016482312	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GISSQPSPLVASSITLGAAHQWDSAGTPAGGTAGFIYLMRIPFKDIITGNERSQATIMPGPKTTSIQSLYAGTSSLDFNSAWLDVASLSNNQYANEHEISAFGAVPASEIEGILVVRKPAAVP*
Ga0070704_1009009292	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	STGCTGPSIDRAQCPLMQRFSSMIDRHESFDRTYSALAPDYNDISSQPSPLVASSITLPPPGGSAGFIFLMRIPFTDIVTGNDNSVATLMPGPTTTSIQSLYAGTGKLDVASMWLDIASLSNNKYATGREIAAFGAVPANEIEGILVVRKPAAAP*
Ga0097621_1005939201	3300006237	Miscanthus Rhizosphere	SMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLGASHQWDTAGTPAGGTAGFIFLMRIPFADVLTGNDVSVATLMPGPKTTSIQSLYAGTSHLDMTKAWLDVASLSNNQYAGEHEISAFGAVPASEIEGILVIRKPAAVQ*
Ga0068871_1001837211	3300006358	Miscanthus Rhizosphere	SQPSPLVACSITLGASHQWDTAGTPAGGTAGFIFLMRIPFADVLTGNDVSVATLMPGPKTTSIQSLYAGTSHLDMTKAWLDVASLSNNQYAGEHEISAFGAVPASEIEGILVIRKPAAVQ
Ga0068871_1011958561	3300006358	Miscanthus Rhizosphere	FAGNLKFTPTGGTLKTISPSQLVAEQQVDSRWNKALLDNADMGLMTVFSSSTGCTGATIDPAQCPLMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLAAAHQWDTAGIPAGGTAGFIYLMKIPFKDILTGNETSVATLMPGPKTTSIQSLYNGTSKLDMTKAWLDVASLSNNQYETEHEISAFGVVPASEIEGILVIRKPAAVQ*
Ga0079222_107949811	3300006755	Agricultural Soil	GISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFKQILAGSETSVATLMPGPQVTSIQSLYRDQSTTLNMNAAWLDIATLSNNQYETEHEISAFGIVPSDEIEGILVIRKPAAVP*
Ga0079220_116846051	3300006806	Agricultural Soil	IKSVAPANIVAEDAVDARWDKSLLAGPDLGLMTVFGDSTGCTAESLDPAQCPLLRRFYSMIDRHENFYQTYSALTANYYGISSQPSPLVACSITLAASHEWDAAGTPSGGTAGFIFLMRIPFKDIVTGNETSVATIMPGPKTTSIQALYRGEASLDFNSAWLDIASLSNNQYETEHEISAFGAV
Ga0075428_1015244561	3300006844	Populus Rhizosphere	ISSQPSPLVACSITLEAAHAWDTAGTPSGGTAGFIFLMRIPFKEILTGNARSVATVMPGPETTSLQSLYAGTSQLDMTRVWLDVASLSNNQFETEHEISAFGAVVPEEIEGILVIRKPAAVP*
Ga0075425_1000833294	3300006854	Populus Rhizosphere	ISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFKEIVTGNQRSVATIMPGPQTTSLQGLYAGTSQLDMSRAWLDVASLSNNQFESEHEISAFGAVQADEIEGILVIRRPAAVP*
Ga0075429_1002241453	3300006880	Populus Rhizosphere	YRTYSALSPDFSSISSQPSPLVACSITLEAAHAWDTAGTPSGGTAGFIFLMRIPFKEILTGNARSVATLMPGPETTSLQSLYAGTSQLDMNRIWLDVASLSNNQFETEHEISAFGAVVPEEIEGILVIRKPAAVP*
Ga0075426_110887201	3300006903	Populus Rhizosphere	FVNSSGAVRTVQPKELVAESKVDSDWDKSLLADADMGLLSMFPDGSSCQDSTIDPGACPLMQRFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPAGGTAGFIFLMRIPFKSILTGNERSVATLMPGPQTTSLQSLYAGGTLDMSRAWLDIASLSNNQYSNEHEISAFGAVPADEIEGILVI
Ga0075436_1004189211	3300006914	Populus Rhizosphere	LAARDMGLMTMFAEPGGCSAAAPTPDQCPLLQRFFSMIDRHENFYRTYSALTPDFASISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFEEIVTGNQRSVATIMPGPQTTSLQGLYAGTSRLDMSRAWLDVASLSNNQFESEHEISAFGAVQADEIEGILVIRRPAAVP*
Ga0079216_109007351	3300006918	Agricultural Soil	NGDGVGEYLKPGPVTLKDGTTGTLQVNSTGQFTGNLKFQPMSGTLRTVSPGEIVARDSVDSRWNAALLNRPDMGLMQVFSSSTGCTGAMIDPAQCPLMRRFYSMIDRHENFYQTYSALQPTYYGVSSQPSPLVACSITLAASHEWDAAGTPPGGTAGFIFLMRIPFKDILTGNERSVATIMPGPKTTSIQSLYAGTGQMDFSSLWLDIASLSNNLYQHEHEI
Ga0075524_102679721	3300006950	Arctic Peat Soil	AQLKAEDAVDPRWDAQLLDDPDMGLLSVFSDGGNCTGQLLDRAQCPLMRRFYSMIDRHENFYRTYSALSPDYYGVSSQPSPLVACSITLTASHHWDAAGTPPGGTAGFIFLMRVPFKDILTGNDRSVATIMPGPKTTSVQGLYAGTATLDMSRAWLDIASLSNNLYQTEHEISAFGAVRAEQIEGILVIRKPAAVP*
Ga0075524_102859792	3300006950	Arctic Peat Soil	ENFYRTYSALSADYYGISSQPSPLVACSITLGASHQWDTAGTPTGGTAGFIFLMRIPFADVITGNDVSVATLMPGPKTTSIQSLYAPGGHLDMARAWLDVASLSNNQYETEHEISAFGAVPAGEIEGILVVRKPAAVQ*
Ga0079219_106226702	3300006954	Agricultural Soil	WDKALIGDADMGLMAVFSSSTNCTSATLDPAQCPLMRRFYSMIDRHENFYRTYSALSADFSGISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFADIVTGNDTSVATVMPGPKTTSIQSLYAGTTKLDLSKAWLDVASLSNNQYAGEHEISAFGAVPAAEIEGILVVRKPAAVP*
Ga0079219_114124241	3300006954	Agricultural Soil	QVNSTGEFTGNLKFVNASGTVRTVQPRELVAEQKVDSDWDKALLAGADMGLLSMFPDGASCQSSTIDPQACPLMQRFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFKEIVAGSDTSVATLMPGPDITSIQGLYRGDDRLDMNAAWLDIATLSNNLYESEHEISAFGAVPAE
Ga0075419_110108362	3300006969	Populus Rhizosphere	RQCPLMQRFFSMIDRHENFYRTYSALSPDFSSISSQPSPLVACSITLSAAHAWDTAGTPAGGRAGFIFLMRVPFKEILTGNDRSVATLMPGPKTTSLQSLFSGASTLDMSRVWLDVASLSNNQFSSEHEISAFGAVQPDEIEGILVIRQPAAVP*
Ga0066710_1024599371	3300009012	Grasslands Soil	GCTAATLDPAQCPLLRRFYSMIDRHENFYQTFSALTPNYYGISSQPSPLVACSITLGAAHQWDTAGTPAGGTAGFIYLMRVPFADVITGNNTSVATIMPGPKTTSIQSIYAGTAKIDFKSAWLDVASLSNNQYESEHEISAFGAVPAGEIEGILVIRKPAAVQ
Ga0115026_101169441	3300009111	Wetland	TCPLMRRFYSMIDRHENFYRTYSALSPDYYGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRVPFKDVITGNDVSVATLMPGPRTTSIQSLYTTAAKLDMSRAWLDVASLSNNQYETEHEISAFGAVPASEIEGILVIRKPAAVQ*
Ga0114129_126020121	3300009147	Populus Rhizosphere	DTVDPRWQASLMQRPDLGLMQVFSSSTGCTAAALDPAQCPLMRRFYSMIDRHENFYQTFSALTPTWYGISSQPSPLVACSITLAAAHAWDAAGTPPGGTAGFIFLMRIPFKAILTGNAKSVSTIMPGPKTTSVQGLYAGSGSLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVIRKPAAVP*
Ga0126374_114625052	3300009792	Tropical Forest Soil	FIRRFGLFSSVWIGAVACVVSLVISALSADFAGISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFADIVTGNDTSVATIMPGPKPTSIQSLYAGTSKLDLSKAWLDVASLSNNQYAGEHEISAFGAVPASEIEGILVVRKPAAVP*
Ga0126384_119695891	3300010046	Tropical Forest Soil	MRRFFSMIDRHENFYRTYSALSADFAGISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFADIVTGNDVSVATVMPGPKTTSIQSLYAGTTKLDLSRAWLDVASLSNNQYSGEHEISAFGAVPAGEIEGILVVRKPAAVP*
Ga0126377_129480361	3300010362	Tropical Forest Soil	ALTPDYYGISSQPSPLVACSITLAASHVWDTAGTPPGGTAGFIFLMRIPFRDILTGNDTSVATVMPGPRTTSIQSLYAGQGHLDMTSLWLDVASLSNNQYAGEHEISAFGAVRADQIEGILVVRKPAAVP*
Ga0134125_119767581	3300010371	Terrestrial Soil	ASVVAEDAVDSRWQKSLLATPDMGLMTVFADSTGCTAATLDPSQCPLLRRFYSMIDRHENFYQTFSALTPTYSGISSQPSPLVASSITLGASHQWDSAGTPAGGTAGFIFLMRIPFKDIVTGNETSVSTIMPGPKTTSIQALYRGEASLDFNSAWLDIASLSNNQYETEHEISAFGAVPAGEIEGILVVRKPAAVP*
Ga0134127_112629281	3300010399	Terrestrial Soil	ISSQPSPLVACSITLAAAHQWDTAGTPPGGSAGFIFLMRIPFEQILAGSETSVATLEPGPDVLSIGDLYQGQELDMTKVWLDIATLSHNAFSSEHEISKFGAVPAEQIEGILVIRTPAAMDE*
Ga0134127_129839131	3300010399	Terrestrial Soil	KFQPGSGSLRTVSPGELVAEDSVDSRWQPNLMTKPDLGLMTVFSSSTGCTAASLDPAQCPLMRRFYSMIDRHENFYQTFSALQPTYYGISSQPSPLVACSITLAASHAWDSAGTPPGGTAGFIFLMRIPFKDILTGNEKSVSTIMPGPKTTSVQSLYAGTGHLDFSSLWLDVASLSNNQYESE
Ga0134122_117039151	3300010400	Terrestrial Soil	GEFSGNLKFVKDGTSTAVTVTPEKIKAVDTVDPAWDPSLLDDKDMGLMSMFSNSTGCTGATLNPAQCPLMQRFYSMIDRHENFYRTYSALSPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFKQILAGSETSVATLMPGPQVTSIQSLYRDQTTTLNMNAAWLDIATLSNNQYETEHEISAFGIVPADEIEGILVIRKPAAL
Ga0150984_1052833042	3300012469	Avena Fatua Rhizosphere	GALGSQPSPLVACSITLGASHAWDAAGTPNGGTAGFIFLMRVPFKQIFTGTKATFSTIPGPAVTSIQDIYDGSATLDLSKLWLDIATLSHNAYQSEHEISKFGAVPAEQIEGILVIRKPAAVQ*
Ga0150984_1184021451	3300012469	Avena Fatua Rhizosphere	ITPAQLVAESGIDPKFSASLLSHADLGLTDVFSDGTNCKSASLDPAKCPLMKRFYSMIDRHENFYQTYSALTPTYYGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRIPFKDIITGNDKSVSTLMPGPKTTSIQSVYTSGAKIDFNSAWLDVASLSNNQYATEHEISAFGAVPASEIEGILVVRKPAAVP*
Ga0150984_1193862301	3300012469	Avena Fatua Rhizosphere	NFYQTYSALTPTYYGVSSQPSPLVACSITLGASHQWDAAGTPTGGTAGFIYLMRIPFKDILTGNERSVATLMPGPMTTSIQSMYSGTGHLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVVRKPAAVQ*
Ga0157308_104761131	3300012910	Soil	QCPLMRRFYSMIDRHENFYQTFSALTPTWYGISSQPSPLVACSITLGASHAWDAAGTPSGGTAGFIFLMRIPFKDILTGNDVSVSTLMPGPKTTSIQSLYAGQGHLDMNSLWLDIASLSNNLYATEHEISAFGAVTAAQIEGILVVRKPAAVQ*
Ga0164241_106629281	3300012943	Soil	TLKFQPTTGSLRTITPGQLVAEDAVDSRWNASLLSKPDLGLMTVFSSSSGCTADSLDPAQCPLMRRFYSMIDRHENFYQTFSALTPTYYGVSSQPSPLVACSITLAASHQWDAAGTPPGGTAGFIFLMRVPFKDILTGNERSVSTLMPGPKTTSVQSLYSGDGHLDFSSLWLDVASLSNNQYETEHEISAFGAVRAEEIEGILVVRKPAAVQ*
Ga0164300_109419851	3300012951	Soil	QTYSGLKPSAANVSQQPSPLVACSITLGASHDWDTAGTPKGGSAGFIYLMRVPFKDVITGDNTSVATLLPGPKTTSIQSLYAGTSTLDFNSAWLDVASLSNNQYANEHEISAFGAVRAEQIEGILVVRKPAAVQ*
Ga0153916_129401451	3300012964	Freshwater Wetlands	FGGTLKFQPTSGTLRSVSPGEIVAADAVDTRWSASYLTKPDLGLMTVFSSSTGCTGASLDPAQCPLMRRFYSMIDRHENFYQTFSALTPTWYGISSQPSPLVACSITLAASHQWDAAGTPPGGTAGFIFLMRIPFKDILTGNDRSVSMLMPGPKTTSVQSLYTGGTHLDFSSLWLDVA
Ga0164308_112486661	3300012985	Soil	TSEFAGNLKFQPTTGALRTVTPENLVANDAVDPNWNASYVSKPDLGLMSVFSSSTGCTGATLDPAQCPLMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLGASHAWDAAGTPPGGTAGFIFLMRIPFKDVLTGNEKSVATLMPGPKTTSVQSLYAGTGKLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVVRKPAAVQ*
Ga0164308_121555251	3300012985	Soil	PTGGTARTVTPAQLVAEDGVDTRWNGALLAKPDLGMMTVFSQATGCTGTSLDPESCPLLKRFFVLIDRHENFYRTYSSLSPDRSSLSSQPSPLVACSITLAAAHQWDTAGTPTGGTAGFIFLMRIPFKSIITGNETSVATIMPGPKTTSIQALYRGEASLDFNSAWLDVASL
Ga0163163_110858071	3300014325	Switchgrass Rhizosphere	QINSTSQFAGNLKFQPASGTLRTISPGELKATDTVDPKWSKSYLTKPDLGLLSVFSSSTGCTADSLDPAQCPLMRRFYSMIDRHENFYQTFSALTPTWYGISSQPSPLVACSITLGASHAWDAAGTPSGGTAGFIFLMRIPFKDILTGNEKSVSTLLPGPKTTSVQSLYAGTGSLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVIRKPAAVQ*
Ga0157376_114373101	3300014969	Miscanthus Rhizosphere	LSSTFAGVSSQPSPLVASSITLAASHQWDSAGTPAGGTAGFIYLMKIPFKDILTGNETSVATLMPGPKTTSIQSLYNGTSKLDMTKAWLDVASLSNNQYETEHEISAFGVVPASEIEGILVIRKPAAVQ*
Ga0173480_103299592	3300015200	Soil	CPLMKRFYSMIDRHENFYQTYSALTANWYGVSSQPSPLVACSITLGASHAWDAAGTPTGGSAGFIFLMRIPFKDILTGNDTSVATLMPGPKTTSIQSLYSGQGQLNMSSLWLDIASLSNNLYANEHEISAFGAVTAAQIEGILVIRKPAAVQ*
Ga0132258_120250563	3300015371	Arabidopsis Rhizosphere	ATLQPSQCPLMQRFYSMIDRHENFYRTYSALSADYYGISSQPSPLVACSITLGASHQWDAAGTPTGGTAGFIFLMRIPFKDILTGNDTSVSTLMPGPKTTSLQSLYAGTSHLDMTRAWLDIASLSNNQYANEHEISAFGAVRAEQIEGILVVRKPAAVQ*
Ga0132257_1044054551	3300015373	Arabidopsis Rhizosphere	CPLMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSVTLGASHQWDTAGTPPNGTAGFIFLMRIPFKDILTGNERSVSTLMPGPKTTSVQSLYAGTGPLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVVRKPAAVP*
Ga0184628_103711331	3300018083	Groundwater Sediment	VSPGEITATDTVDTRWNKAFLTKPDMGLLSVFQSSTGCTAAMLDPAQCPLMRRFYSMIDRHENFYKTYSALTPTYSGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRIPFKDILTGNERSVSTIMPGPKTTSVHSLYAGTTHLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQ
Ga0190269_104597731	3300018465	Soil	EPGLGLTTVFSDPTGCTGATVDEKQCPLMQRFYSMIDRHENFYRTYSALNPDFSSISSQPSPLVACSITLEAAHAWDTAGTPADGTAGFIFLMRIPFQDILTGNDVSVATLMPGPKTTSIQSVYAGTGKIDFDSLWLDIASLSNNQFESEHEISAFGAVKAEQIEGILVIRKPAAVQ
Ga0190270_123640461	3300018469	Soil	GEFTGNLKFQPASGSVRTVTPAQLEAESDADPTWDPALLDDADMGLMSVFSNSTNCTASLLNPAQCPLMQRFYSMIDRHENFYRTYSALSPDYYGVSSQPSPLVACSITLGASHHWDTAGTPSGGTAGFIFLMRIPFKDILTGNDRSVSTIMPGPKPTSIQSLYAGTSRMDFSSLWLDIASLSNNLYESEHEISAFG
Ga0190274_115163052	3300018476	Soil	DMGMLDVFSASTGCTGASIDPAACPLMRRFYSMIDRHENFYHTYSALTPDYYGISSQPSPLVACSITLTAAHHWDSAGIPSGGTAGFIFLMRIPFKDILTGNDTSVATLMPGPKTTSIQSLYSGGGRMDFNSLWLDIASLSNNLYASEHEISAFGAVAAAQIEGILVIRKPAAVQ
Ga0190264_114048421	3300019377	Soil	ISPGELVAQDAVDSRWNASLMSKPDLGLMTVFSSSTGCTATSLDPAQCPLMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLRASHHWDAAGTPPGGTAGFIFLMRIPFKDILTGNERSVSTIMPGPKTTSIQSLYAGTGQLDFSSLWLDIASLSNNLYQTEHEISAFGAVRADQIEGILVIRKPAAVQ
Ga0193712_11042501	3300019880	Soil	NFYRTYSALSPDYYGISSQPSPLVACSITLGAAHQWDTAGTPSGGTAGFIFLMRIPFKDILTGNDTSVATLMPGPKTTSIQGLYAGTGKLEVSSLWLDIASLSNNQYATEHEISAFGAVPASEIEGIIVVRKPAAVP
Ga0210133_10474282	3300025573	Natural And Restored Wetlands	LLGDPDMGLTSVFADDTGCTGALLDPAQCPLMQRFYSMIDRHENFYRTYSALSADYYGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRIPFADILTGTDTSVATLMPGPRTTSIQSLYAGTRQLDMSRAWLDIASLSNNQYAGEHEISAFGAVRAEQIEGILVVRKPAAVQ
Ga0210133_11358381	3300025573	Natural And Restored Wetlands	HENFYRTYSALSPDYYGISSQPSPLVACSITLAASHQWDTAGTPSGGTAGFIFLMRIPFKDILTGNDTSVATLMPGPKATSIQSLYAGTGHLDFNSLWLDIASLSNNLYQTEHEISAFGAVDAAQIEGILVIRKPAAVP
Ga0207653_102585241	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	FYSMIDRHENFYQTFSALQPTYYGISSQPSPLVACSITLAASHAWDSAGTPPGGTAGFIFLMRIPFEQILAGSETSVATLEPGPDVLSIGDLYRGQELDMTKVWLDIATLSHNAFSSEHEISKFGAVPAEQIEGILVIRTPAAMDE
Ga0209585_102199591	3300025891	Arctic Peat Soil	AQLKAEDAVDPRWDAQLLDDPDMGLLSVFSDGGNCTGQLLDPAQCPLMRRFYSMIDRHENFYRTYSALSPDYYGVSSQPSPLVACSITLTASHHWDAAGTPPGGTAGFIFLMRVPFKDILTGNDRSVATIMPGPKTTSVQGLYAGTATLDMSRAWLDIASLSNNLYQTEHEISAFGAVRAEQIEGILVIRKPAAVP
Ga0209585_104820231	3300025891	Arctic Peat Soil	ENFYRTYSALSADYYGISSQPSPLVACSITLGASHQWDTAGTPTGGTAGFIFLMRIPFADVITGNDVSVATLMPGPKTTSIQSLYAPGGHLDMARAWLDVASLSNNQYETEHEISAFGAVPAGEIEGILVVRKPAAVQ
Ga0207689_100854994	3300025942	Miscanthus Rhizosphere	GTLQVNSTGEFTGNLKFVDASGAVRSITPEKLVAADTVDPRWRGELLAGRDMGLMTMFADAAGCTAEAPTPAQCPLLQRFFSMIDRHENFYRTYSALTPDFSSISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFEEIVTGNQRSVATIMPGPETTSLQGLYAGTAQLDMARAWLDVASLSNNQFESEHEISAFGAVQPDEIEGILVIRRPAAVP
Ga0207661_106354322	3300025944	Corn Rhizosphere	GVGEFLRPGAVKLTSGEMGTLQVNATSQFAGTLKFQPASGTLRTVSPGELVAEDSVDSRWSPSLMSKPDMGLMTVFSSSAGCTAATLDPAQCPLMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLAAAHQWDTAGIPAGGTAGFIYLMKIPFKDILTGNETSVATLMPGPKTTSIQSLYNGTAKLDMTKAWLDVASLSNNQYETEHEISAFGVVPASEIEGILVIRKPAAVP
Ga0207651_112792142	3300025960	Switchgrass Rhizosphere	TPAQCPLLQRFFSMIDRHENFYRTYSALTPDFSSISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFKEIVTGNQRSVATIMPGPETTSLQGLYAGTAQLDMARAWLDVASLSNNQFESEHEISAFGAVQPDEIEGILVIRRPAAVP
Ga0207677_117415381	3300026023	Miscanthus Rhizosphere	LLAGRDMGLMTMFADAAGCTAEAPTPAQCPLLQRFFSMIDRHENFYRTYSALTPDFSSISSQPSPLVACSITLAAAHQWDTAGTPSGGTAGFIFLMRIPFKEIVTGNQRSVATIMPGPETTSLQGLYAGTAQLDMGRAWLDVASLSNNQFESEHEISAFGAVQPDEIEGILVIRRPAAVP
Ga0207708_115055241	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DPKWSASYLTKPDMGLMNVFSTGTGCTGATINPAQCPLMQRFYSLIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFKEIVAGSDASVATLMPGPDVTSIQGLYRGDDHLDMNAAWLDIATLSNNLYESEHEISAFGVVPAGQIEGILVIRQPAAVP
Ga0207674_122296771	3300026116	Corn Rhizosphere	SGTVRTVQPRELVAEQKVDSDWDKALLADADMGLLSMFPDGSSCQDSTIDPGACPLMQRFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFADIVTGNDTSVATIMPGPKTTSIQSLYAGTTKLDLSKAWLDVAS
Ga0208987_11022431	3300027496	Forest Soil	GNLKFVIGTAAAKTITPSGLTAEEQVDSRWQASYLAKPDMGLLSVFASSAGCTAAALDPAQCPLLKRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLGASHQWDSAGTPSGGTAGFIFLMRIPFADIVTGNATSVATIMPGPKTMPIQSLYAGAQLDMSKAWLDV
Ga0209293_100173143	3300027877	Wetland	EFTGNLKFKNASGTVRTVQPKDLVAEDAVDTRWDRALLAKPDLGLMNVFSASAGCTGASIDPAQCPLMRRFYSMIDRHENFYHTYSALTPDYYGISSQPSPLVACSITLAAAHHWDSAGIPSGGTAGFIFLMRIPFEDILTGNDVSVATLMPGPKTTSIQSLYSGSGRMDFTSLWLDIASLSNNLYESEHEISAFGAVAASQIEGILVVRKPAAVQ
Ga0209293_104447071	3300027877	Wetland	TCPLMRRFYSMIDRHENFYRTYSALSPDYYGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRVPFKDVITGNDVSVATLMPGPRTTSIQSLYTTAAKLDMSRAWLDVASLSNNQYETEHEISAFGAVPASEIEGILVIRKPAAVQ
Ga0209253_106920752	3300027900	Freshwater Lake Sediment	NCTGQLLDPAQCPLMRRFYSMIDRHENFYRTYSALSADYYGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRIPFKDVITGNDVSVSTLMPGPKTTSIQSLYTTAAKLDMSKAWLDVASLSNNQYATEHEISAFGAVRAEQIEGILVVRKPAALP
Ga0209382_109237872	3300027909	Populus Rhizosphere	ATLDPAQCPLMRRFYSMIDRHENFYQTFSALQPTYYGISSQPSPLVACSITLAASHAWDSAGTPPGGNAGFIFLMRIPFKEILTGNARSVATLMPGPETTSLQSLYAGTSQLDMNRIWLDVASLSNNQFETEHEISAFGAVVPEEIEGILVIRKPAAVP
Ga0310888_101724802	3300031538	Soil	CTGASIDPAQCPLMQRFYSMIDRHENFYQTYSALTPTYYGTSSQPSPLVACSITLGASHAWDAAGTPSGGTAGFIFLMRIPFKDILTGNDKSVSTVMPGPKTTSIQSLYAGTGQLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVIRKPAAVQ
Ga0310887_110443521	3300031547	Soil	LMRRFYSMIDRHENFYQTYSALTPTYYGISSQPSPLVACSITLTAAHHWDAAGTPPGGTAGFIFLMRIPFKDILTGNDRSVSTIMPGPKTTSIQSLYAGQGSLDFSSLWLDIASLSNNLYQTEHEISAFGAVRADQIEGILVIRKPAAVP
Ga0310900_108347972	3300031908	Soil	QFTGNLKFQNAAGTVRTVKPMELVAESRVDGAWDPALLADADMGLLSMFSDGGACGGATIDPQQCPLMQRFYSMIDRHENFYKTYSALTSSYYGVSSQPSPLVACSITLGASHAWDSAGTPSGGTAGFIFLMRLPFKDILTGNERSVATIMPGPKTTSIQGLYTQGEKLDFTSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVIRKPAAVQ
Ga0310900_114882011	3300031908	Soil	TGCTGASLDPAQCPLMRRFYSMIDRHENFYRTYSALNPDFASISSQPSPLVACSITLEAAHAWDTAGTPAGGTAGFIFLMRIPFKDILTGNDTSVATLMPGPKTTSIQSLYAGSSTLDMSRVWLDIASLSNNLYQTEHEISAFGAVRPEQIEGILVIRKPAAVQ
Ga0307409_1025197341	3300031995	Rhizosphere	LMRRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLAASHQWDAAGTPPGGTAGFIFLMRIPFKDILTGNERSVSTLMPGPKTTSVQSLYAGTSTLDFSSLWLDIASLSNNLYETEHEISAFGAVRADQIEGILVVRKPAAVP
Ga0310899_103071491	3300032017	Soil	SGETGTLLVNSTGEFTGNLKFQPTSGTVRTISPGQLVAQDRVDSRWSPSLLARPDLGLMTVFSSSTGCTGAMIDPAQCPLMRRFYSMIDRHENFYQTYSALTPTYYGISSQPSPLVACSITLRASHHWDAAGTPPNGTAGFIFLMRIPFKDILTGNDRSVSTIMPGPKTTSIQSLYAGQGSLDFSSLWLDIASLSNNLYQTEHEISAFGAVRADQIEGILVIRKPAAVQ
Ga0310890_113181111	3300032075	Soil	LTANYYGISSQPSPLVACSITLGASHAWDSAGTPSGGTAGFIFLMRIPFKDILTGNEKSVSTIMPGPKTTSVQGLYAGTGSLDFSSLWLDVASLSNNQYESEHEISAFGAVRADQIEGILVIRKPAAVQ
Ga0315910_116078641	3300032144	Soil	LVAESAVDPRWEPSLLDRPDMGLMRVFSESTGCTGELLDPNQCPLMQRFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLTAAHHWDTAGTPAGGTAGFIFLMRIPFKDILTGNERSVATLMPGPQTTSIQSLYAGTNTLDMSRVWLDIASLSNNLYQTEHE
Ga0315912_100393451	3300032157	Soil	GTLRTITPDQIVANDAVDPKWSASYLNKPDMGLMNVFSSSTGCTGATINPAQCPLMQRFYSLIDRHENFYQTFSALTPTWYGISSQPSPLVACSITLAASHAWDAAGTPPGGTAGFIDLMRIPFKDILTGNDVSVSTIMPGPKTTSIQSLYAGTGHLDFSSLWLDIASLSNNLYQTEHEISAFGAVRADQVEGILVIRKPAAVP
Ga0310896_102034831	3300032211	Soil	LEAESSVDSRWSSSYLARPDMGLMQVFSSSSGCTGASLDPAQCPLMRRFYSMIDRHENFYQTYSALTPTYYGISSQPSPLVACSITLRASHHWDAAGTPPNGTAGFIFLMRIPFKDILTGNDRSVSTIMPGPKTTSIQSLYAGQGSLDFSSLWLDIASLSNNLYQTEHEISAFGAVRADQIEGILVIRKPAAVQ
Ga0306920_1038384771	3300032261	Soil	DPDIGLMSMFSDSTGCTDANPTPTGCSLLKRFYSMIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLAAAHQWDTAGIPAGGTAGFIYLMKIPFRDILTGNETSVATLMPGPKTTSIQSLYNGTSKLDMTKAWLDVASLSNNQYETEHEISAFGVVPASEIEGILVIRKPAAVP
Ga0310810_100240117	3300033412	Soil	RPDSASISSQPSPLVACSITLAAAHAWDSAGTPPGGSAGFIFLMRIPFDQILAGSETSVATLDPGPDVLSIGDLYDGHDLDMTKVWLDIATLSHNAFSSEHEISKFGAVPAEQIEGILVIRTPAAMDE
Ga0310810_102195132	3300033412	Soil	MIDRHENFYQTFSALTPTYYGISSQPSPLVACSITLGASHQWDSAGTPAGGTAGFIFLMRIPFKDILTGNEKSVATIMPGPKTTSVQSLYAGTGHLDFSSLWLDVASLSNNQYETEHEISAFGAVRADQIEGILVIRKPAAVQ
Ga0310810_111552871	3300033412	Soil	CQDSTIDPGACPLMQRFYSMIDRHENFYQTYSALTPDYYGISSQPSPLVACSITLAAAHQWDTAGTPSGGRAGFIFLMRIPFKQILAGSETSVATLMPGPQVTSIQSLYRDQSTTLNMNAAWLDIATLSNNQYATEHEISAFGIVPADEIEGILVIRKPAALP
Ga0316603_100469613	3300033413	Soil	EFLRPGPVTLVNGDTGTLQVNSTGEFTGNLKFQPATGPVRTITPAQLRAEDGVDPRWDVQLLDDPDMGLLSVFSDGGNCTAQLLDPAQCPLMRRFYSMIDRHENFYRTYSALSPDYYGISSQPSPLVACSITLAAAHHWDTAGTPSGGTAGFIFLMRIPFKDILTGNDRSVATIMPGPKTTSLQSLYTGTATLDLSKAWLDIASLSNNLYQTEHEISAFGAVRPDQIEGILVVRKPAAVP
Ga0316619_106148942	3300033414	Soil	GDNVGEFLRPGPIKLTSGEQGELQVNSTGEFTGNLKFKNASGTVRTVQPKDLVAEDAVDTRWDRALLAKPDMGLMNVFSASAGCTGASIDPAQCPLMRRFYSMIDRHENFYHTYSALTPDYYGISSQPSPLVACSITLAAAHHWDSAGIPSGGTAGFIFLMRIPFEDILTGNDVSVATLMPGPKTTSIQSLYSGSGRMDFTSLWLDIASLSNNLYESEHEISAFGAVAASQIEGILVVRKPAAVQ
Ga0316619_106406582	3300033414	Soil	NLKFQPATGPVRTITPAQLRAEDGVDPRWDVQLLDDPDMGLLSVFSDGGNCTAQLLDPAQCPLMRRFYSMIDRHENFYRTYSGLSPDFSGISSQPSPLVACSITLTAAHHWDTAGTPSDGTAGFIFLMRIPFEDILTGNDTSVATLMPGPKTTSIQSLYAGNGALDMSSLWLDIASLSNNQYETEHEISAFGAVAAHQIEGILVIRKPAAVQ
Ga0316601_1002289072	3300033419	Soil	PLMRRFYSMIDRHENFYHTYSALTPTYYGISSQPSPLVACSITLAAAHHWDSAGIPSGGTAGFIFLMRIPFADILTGNDVSVATLMPGPKTTSIQSLYSGSGRMDFDSLWLDIASLSNNLYESEHEISAFGAVSAPQIEGILVVRKPAAVP
Ga0316624_115161871	3300033486	Soil	TWDAQLLDDPDMGLLGVFSDGTGCTSASLDPASCPLMRRFYSMIDRHENFYRTYSALSPDYYGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRIPFKDVITGNDVSVATLMPGPKTTSIQSLYTTANKLDMSKAWLDVASLSNNQYETEHEISAFGAVPASEIEGILVIRKPAAVQ
Ga0316631_102353021	3300033493	Soil	RHENFYRTYSALSPDYYGISSQPSPLVACSITLGASHQWDTAGTPSGGTAGFIFLMRIPFKDVITGNDVSVATLMPGPKTTSIQSLYTTANKLDMSKAWLDVASLSNNQYETEHEISAFGAVPASEIEGILVIRKPAAVQ
Ga0314793_130418_19_468	3300034668	Soil	MQRFYSMIDRHENFYKTYSALTSSYYGVSSQPSPLVACSITLGASHAWDSAGTPSGGTAGFIFLMRIPFKDILTGNDKSVATIMPGPKTTSIQSLYAGTGKLDFSSLWLDIASLSNNLYSTEHEISAFGAVRADQIEGILVIRKPAAVQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094032

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign