NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F093920

Metagenome / Metatranscriptome Family F093920

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F093920
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 76 residues
Representative Sequence AVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Number of Associated Samples 95
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.55 %
% of genes near scaffold ends (potentially truncated) 92.45 %
% of genes from short scaffolds (< 2000 bps) 97.17 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.396 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.264 % of family members)
Environment Ontology (ENVO) Unclassified
(48.113 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(66.038 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 74.67%    β-sheet: 0.00%    Coil/Unstructured: 25.33%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF00141peroxidase 4.72
PF07332Phage_holin_3_6 3.77
PF03992ABM 1.89
PF00106adh_short 0.94
PF01609DDE_Tnp_1 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0376Catalase (peroxidase I)Inorganic ion transport and metabolism [P] 4.72
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.94
COG3293TransposaseMobilome: prophages, transposons [X] 0.94
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.94
COG5421TransposaseMobilome: prophages, transposons [X] 0.94
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.94
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.94

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.40 %
UnclassifiedrootN/A6.60 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004153|Ga0063455_100146048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1077Open in IMG/M
3300004479|Ga0062595_100497087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia914Open in IMG/M
3300005330|Ga0070690_101321907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia578Open in IMG/M
3300005338|Ga0068868_101947855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia557Open in IMG/M
3300005364|Ga0070673_100989488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia783Open in IMG/M
3300005365|Ga0070688_100852173All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia716Open in IMG/M
3300005441|Ga0070700_100566912All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300005441|Ga0070700_100766803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia773Open in IMG/M
3300005456|Ga0070678_101056108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia748Open in IMG/M
3300005535|Ga0070684_102314413All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia507Open in IMG/M
3300005543|Ga0070672_100317962All Organisms → cellular organisms → Bacteria1323Open in IMG/M
3300005548|Ga0070665_101500376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia683Open in IMG/M
3300005564|Ga0070664_101029950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia774Open in IMG/M
3300005614|Ga0068856_100470398All Organisms → cellular organisms → Bacteria1278Open in IMG/M
3300005614|Ga0068856_102540708Not Available519Open in IMG/M
3300005616|Ga0068852_100842637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia932Open in IMG/M
3300005617|Ga0068859_100587020All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300005618|Ga0068864_101682205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia639Open in IMG/M
3300005834|Ga0068851_10749518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia604Open in IMG/M
3300005842|Ga0068858_101433977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia680Open in IMG/M
3300005844|Ga0068862_102441097Not Available534Open in IMG/M
3300006358|Ga0068871_101975905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia555Open in IMG/M
3300006755|Ga0079222_10736221All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300006871|Ga0075434_102207556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia554Open in IMG/M
3300006881|Ga0068865_100054361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia cypriaca2782Open in IMG/M
3300006881|Ga0068865_100826227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia801Open in IMG/M
3300007004|Ga0079218_12730051All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300009148|Ga0105243_10517881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1134Open in IMG/M
3300009840|Ga0126313_10504284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria969Open in IMG/M
3300010036|Ga0126305_10696780Not Available687Open in IMG/M
3300010041|Ga0126312_11007976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae610Open in IMG/M
3300010147|Ga0126319_1230910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia503Open in IMG/M
3300010371|Ga0134125_12102049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia614Open in IMG/M
3300010396|Ga0134126_12492492Not Available562Open in IMG/M
3300011332|Ga0126317_10024119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia604Open in IMG/M
3300012212|Ga0150985_118294161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia530Open in IMG/M
3300012469|Ga0150984_108273408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia512Open in IMG/M
3300012469|Ga0150984_108350539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae529Open in IMG/M
3300012495|Ga0157323_1018668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia638Open in IMG/M
3300012500|Ga0157314_1031197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia600Open in IMG/M
3300012957|Ga0164303_10335539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia907Open in IMG/M
3300013307|Ga0157372_12898932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia549Open in IMG/M
3300013308|Ga0157375_10232890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia asaccharolytica2001Open in IMG/M
3300013308|Ga0157375_12022765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia685Open in IMG/M
3300013308|Ga0157375_12625844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia602Open in IMG/M
3300014497|Ga0182008_10967851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia505Open in IMG/M
3300014968|Ga0157379_11822420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia598Open in IMG/M
3300014969|Ga0157376_13064874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae506Open in IMG/M
3300015373|Ga0132257_101874754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia771Open in IMG/M
3300017965|Ga0190266_10737998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia621Open in IMG/M
3300018073|Ga0184624_10536079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia506Open in IMG/M
3300018429|Ga0190272_12621781All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia552Open in IMG/M
3300018465|Ga0190269_10205453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1071Open in IMG/M
3300018466|Ga0190268_11554874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia579Open in IMG/M
3300018481|Ga0190271_11452146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia804Open in IMG/M
3300018920|Ga0190273_10757122All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria763Open in IMG/M
3300018920|Ga0190273_11758018All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia562Open in IMG/M
3300019362|Ga0173479_10813943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia518Open in IMG/M
3300020069|Ga0197907_10489292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1205Open in IMG/M
3300020070|Ga0206356_11305264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia504Open in IMG/M
3300020075|Ga0206349_1839038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1195Open in IMG/M
3300020081|Ga0206354_10349269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia860Open in IMG/M
3300022467|Ga0224712_10562070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia555Open in IMG/M
3300022756|Ga0222622_11373539Not Available520Open in IMG/M
3300025321|Ga0207656_10494013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia621Open in IMG/M
3300025909|Ga0207705_11520333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia506Open in IMG/M
3300025920|Ga0207649_11078932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia633Open in IMG/M
3300025923|Ga0207681_11238049All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium627Open in IMG/M
3300025926|Ga0207659_11609070All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia554Open in IMG/M
3300025937|Ga0207669_10527224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria949Open in IMG/M
3300025938|Ga0207704_11608652All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia558Open in IMG/M
3300025944|Ga0207661_10291411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1461Open in IMG/M
3300025981|Ga0207640_12117826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae510Open in IMG/M
3300026023|Ga0207677_11932963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia548Open in IMG/M
3300026035|Ga0207703_10230356All Organisms → cellular organisms → Bacteria1661Open in IMG/M
3300026035|Ga0207703_11709924Not Available605Open in IMG/M
3300026041|Ga0207639_10885885All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia834Open in IMG/M
3300026075|Ga0207708_10050485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3166Open in IMG/M
3300026078|Ga0207702_10487440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1200Open in IMG/M
3300026088|Ga0207641_12569393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia507Open in IMG/M
3300026095|Ga0207676_11581224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia653Open in IMG/M
3300026118|Ga0207675_100255433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1697Open in IMG/M
3300026142|Ga0207698_11861130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia617Open in IMG/M
3300026142|Ga0207698_12349462All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia545Open in IMG/M
3300027809|Ga0209574_10054271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1030Open in IMG/M
3300028379|Ga0268266_11492594Not Available651Open in IMG/M
3300028590|Ga0247823_11182639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia573Open in IMG/M
3300028592|Ga0247822_10563777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia908Open in IMG/M
3300028754|Ga0307297_10020326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia cypriaca1867Open in IMG/M
3300028809|Ga0247824_11056780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia516Open in IMG/M
3300028812|Ga0247825_10407373All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia961Open in IMG/M
3300028812|Ga0247825_10872756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia651Open in IMG/M
3300028880|Ga0307300_10223897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia616Open in IMG/M
3300031093|Ga0308197_10451702All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia515Open in IMG/M
3300031547|Ga0310887_11009132All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia531Open in IMG/M
3300031938|Ga0308175_102966563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia528Open in IMG/M
3300031995|Ga0307409_101775350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia646Open in IMG/M
3300032004|Ga0307414_12081109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia530Open in IMG/M
3300032080|Ga0326721_10100399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1382Open in IMG/M
3300033550|Ga0247829_10625892All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300033551|Ga0247830_10380643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1095Open in IMG/M
3300033551|Ga0247830_11195815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia607Open in IMG/M
3300034001|Ga0334919_088139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia511Open in IMG/M
3300034132|Ga0334915_111097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia573Open in IMG/M
3300034268|Ga0372943_1016901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia553Open in IMG/M
3300034662|Ga0314783_096725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia624Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil10.38%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere9.43%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere8.49%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere4.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.77%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.83%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.83%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.83%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.89%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust1.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.94%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012495Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610Host-AssociatedOpen in IMG/M
3300012500Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610Host-AssociatedOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027809Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034001Biocrust microbial communities from Mojave Desert, California, United States - 15HMCEnvironmentalOpen in IMG/M
3300034132Biocrust microbial communities from Mojave Desert, California, United States - 11HMCEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034662Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0063455_10014604833300004153SoilKGKAVYAEKAPVVQQQVNKAVADARPVVQEKVAQGQALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKNT*
Ga0062595_10049708733300004479SoilKAPPAVQQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA*
Ga0070690_10132190713300005330Switchgrass RhizosphereVDQAVEKGKAVYAEKAPVVQQHVHKAVADAKPVVQEKVARGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKKTA*
Ga0068868_10194785513300005338Miscanthus RhizosphereQVNKAVADARPVVQEKVAQGQALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKNA*
Ga0070673_10098948833300005364Switchgrass RhizosphereKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0070688_10085217313300005365Switchgrass RhizosphereAVTKGKAVYAEKAPVVQQQVNKAVAEAKPVVQEKVAQAKAVYVEKAPPAVQRTLDQRPGLVVGVAAALVVLLIGLARKAKKKA*
Ga0070700_10056691223300005441Corn, Switchgrass And Miscanthus RhizosphereKGKAVYAEKAPPAVQHKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0070700_10076680313300005441Corn, Switchgrass And Miscanthus RhizospherePVVQQQVAKARNVLAEKAPPVERMLREKPGVVAAVAVALVALLIFSSRKK*
Ga0070678_10105610823300005456Miscanthus RhizosphereHKAVADAKPVVQEKVARGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKTA*
Ga0070684_10231441313300005535Corn RhizosphereAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0070672_10031796213300005543Miscanthus RhizosphereVQQRVERARAVLAEKAPVVQQQVRKMVSDATPVVQQQVAKARNVLAEKAPPVERMLREKPGVVAAVAVALVALLIF
Ga0070665_10150037623300005548Switchgrass RhizosphereYAEKAPVVQQQVNKAVAEAKPVVQEKVAQAKAVYVEKAPPAVQRTLDQRPGLVVGVAAALVVLLIGLARKAKKKA*
Ga0070664_10102995023300005564Corn RhizosphereAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0068856_10047039833300005614Corn RhizosphereAEKAPPAVQHKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0068856_10254070823300005614Corn RhizosphereQQVSEIVSDATPVVQQQVAKARNVLAEKAPPVERTLREKPGVVAAVAVALVALLIFSSRKK*
Ga0068852_10084263733300005616Corn RhizosphereKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAQKAPPVERTLREKPGVVAGVVVALVVLLIVTSRKRKNA*
Ga0068859_10058702013300005617Switchgrass RhizosphereAEKAPPAVQQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA*
Ga0068864_10168220513300005618Switchgrass RhizosphereVVQHHVNKAVADARPVVQQKVARAQGLLADTAPPVERTLREKPRLVAGVAVALVVLLIAFSRKKSA*
Ga0068851_1074951833300005834Corn RhizospherePVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA*
Ga0068858_10143397733300005842Switchgrass RhizosphereVQEKVAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA*
Ga0068862_10244109713300005844Switchgrass RhizosphereMVSDATPVVQQQVAKARNVLAEKAPPVERMLREKPGVVAAVAVALVALLIFSSRKK*
Ga0068871_10197590513300006358Miscanthus RhizosphereKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0079222_1073622113300006755Agricultural SoilEKAPVVQQQVSKAVADARPVVQEKVAQGQALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKR*
Ga0075434_10220755623300006871Populus RhizosphereVYAEKAPVVQQHVHKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKRSA*
Ga0068865_10005436153300006881Miscanthus RhizosphereQQVRKMVSDATPVVQQQVAKARNVLAEKAPPVERMLREKPGVVAAVAVALVALLIFSSRKK*
Ga0068865_10082622713300006881Miscanthus RhizosphereQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA*
Ga0079218_1273005123300007004Agricultural SoilRTVVAEKAPVVQQQVSKAVSDATPVVQQQVAKAQSVLAKKAAPVERTLREKPGVVAAVAVALVALLIFSSRKKT*
Ga0105243_1051788123300009148Miscanthus RhizosphereVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0126313_1050428433300009840Serpentine SoilPVVQQQVNKAVADARPVVQEKVAQGQALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKNT*
Ga0126305_1069678013300010036Serpentine SoilVSRSKAVYTEKAPPAVQEKVGQAVHKGKAVYAEKAPVVQQQVNKAVADARPVVQEKVAQGQALLAQKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKNT*
Ga0126312_1100797623300010041Serpentine SoilVVQEKVGQAVDKGKAVYAEKAPVVQQQVNKAVADARPVVQEKVAQGQALLAQKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKNT*
Ga0126319_123091013300010147SoilTKGRAVYAEKAPVVSQQVHQAVADATPVVQQQVARAQGLLAEKAPPVERTLREKPGLVAGIAVALVALLIATSRKKKSA*
Ga0134125_1210204913300010371Terrestrial SoilKVAQGHALLAQKAPPVERTLREKPGVVAGVVVALVVLLIVTSRKRKNA*
Ga0134126_1249249213300010396Terrestrial SoilVSDATPVVQQQVAKARNVLAEKASPVERTLREKPGVVAAVAVALVALLIFSSRKK*
Ga0126317_1002411913300011332SoilKAPPVVQEKVGQAVDKGKAVYAEKAPVVQQQVNKAVADAKPIVQEKVAQGQALLAEKAPPVERTLREKPGLVAGIAVALVVLLIAISRKKK*
Ga0150985_11829416123300012212Avena Fatua RhizosphereKGKAVYAEKAPVVQQHVNKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTT*
Ga0150984_10827340813300012469Avena Fatua RhizosphereGKTVYAEKAPVVQQHVNKVVADATPVVQQKVAQAQGLLAEKAPPVERTLREKPGLVAGIAVALVALLIATSRKKKSS*
Ga0150984_10835053913300012469Avena Fatua RhizosphereGHALLAEKAPPAVQHKVDQAVGKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTS*
Ga0157323_101866823300012495Arabidopsis RhizosphereAPPAVQQKVDQAVEKGKAVYAEKAPVVAQHVNKAVSDARPVVQEKVAQGQALLAQKAPPVERTLREKPGLVAGIAVALVVLLIATSRKRKNA*
Ga0157314_103119723300012500Arabidopsis RhizosphereEKAPPAVQQKVDQAVEKGKAVYAEKAPVVAQHVNKAVSDARPVVQEKVAQGQALLAQKAPPVERTLREKPGLVAGIAVALVVLLIATSRKRKNA*
Ga0164303_1033553913300012957SoilKAPPAVQRGVDQAVTKSKAVYADKAPVVQHHVNNAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA*
Ga0157372_1289893213300013307Corn RhizosphereKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0157375_1023289033300013308Miscanthus RhizosphereAVYAEKAPPAVQQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA*
Ga0157375_1202276513300013308Miscanthus RhizosphereKAVYAEKAPPAVQHKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTG*
Ga0157375_1262584413300013308Miscanthus RhizospherePVVQHHVNKAVADARPVVQQKVARAQGLLADTAPPVERTLREKPRLVAGVAVALVVLLIAFSRKKSA*
Ga0182008_1096785113300014497RhizosphereAVTRGKAVYADKAPVVQQQVSKAVADAKPVVQGKVAQAQGLLAEKAPPVERTLREKPGVVAAVVVALVVLLIVRSRKKS*
Ga0157379_1182242013300014968Switchgrass RhizosphereQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVEWTLREKPGVVAGIAVAPVVLLILTSRKRKNA*
Ga0157376_1306487413300014969Miscanthus RhizospherePPAVQHKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA*
Ga0132257_10187475423300015373Arabidopsis RhizosphereVYAEKAPPAVQQKVDQAVEKGKAVYAEKAPVVAQHVNKAVADARPVVQDKVAQGHALLAQKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA*
Ga0190266_1073799813300017965SoilAPVVAQHVNKAVADARPVVQEKVAQGHALLAQKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA
Ga0184624_1053607923300018073Groundwater SedimentPVVQEKVAQGHALLAQKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA
Ga0190272_1262178113300018429SoilVEKSKAVYAEKAPVVQQHVHKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKTT
Ga0190269_1020545313300018465SoilKGKAVYAEKAPVVQQHVNKAVADAKPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKKA
Ga0190268_1155487423300018466SoilYAEKTPPAVQQKVDQAVEKSKAVYAEKAPVVQQHVHKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKTT
Ga0190271_1145214613300018481SoilVDQAVEKGKAVYAEKAPVVQQHVHKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKTT
Ga0190273_1075712233300018920SoilATPVVQQKVAQAQGLLAEKAPPVERTLREKPGVVAGVVVALVVLLIATSRKKKTA
Ga0190273_1175801813300018920SoilHVNRVVAGATPVVQEKVGQARAVYAEKAPPAVQRTLDQRPGLVVGVAGALVVLLIGLARRTKKTKV
Ga0173479_1081394313300019362SoilKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA
Ga0197907_1048929223300020069Corn, Switchgrass And Miscanthus RhizosphereVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTG
Ga0206356_1130526423300020070Corn, Switchgrass And Miscanthus RhizosphereDARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0206349_183903823300020075Corn, Switchgrass And Miscanthus RhizosphereVADARPVVQQKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTG
Ga0206354_1034926913300020081Corn, Switchgrass And Miscanthus RhizospherePVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTG
Ga0224712_1056207013300022467Corn, Switchgrass And Miscanthus RhizosphereVYAEKAPPAVQRGVDQAVTKGKAVYADKAPVVQHHVNKAVADARPVVQEKVARAQGLLADKAPPVERTLREKPRLVAGVAVALVALLIAFSRKKNA
Ga0222622_1137353913300022756Groundwater SedimentVSDATPAVQQQVAKARNVLAEKAPPVERTLREKPGVVAAVAVALVALLIFSSRKK
Ga0207656_1049401313300025321Corn RhizospherePVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0207705_1152033313300025909Corn RhizosphereADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Ga0207649_1107893223300025920Corn RhizosphereAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Ga0207681_1123804923300025923Switchgrass RhizosphereVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGLVAGVAVALVVLRGTLL
Ga0207659_1160907013300025926Miscanthus RhizosphereVYAEKAPPAVQQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0207669_1052722433300025937Miscanthus RhizosphereVADAKPVVQEKVARGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKKTA
Ga0207704_1160865223300025938Miscanthus RhizosphereAEKAPPAVQQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA
Ga0207661_1029141123300025944Corn RhizosphereVADARPVVQQKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Ga0207640_1211782613300025981Corn RhizosphereHVNKAVADARPVVQQKVARAQGLLADTAPPVERTLREKPRLVAGVAVALVVLLIAFSRKKSA
Ga0207677_1193296313300026023Miscanthus RhizosphereEKAPPAVQRGVDQAVTKGKAVYADKAPVVQHHVNKAVADARPVVQEKVARAQGLLADKAPPVERTLREKPRLVAGVAVALVALLIAFSRKKNA
Ga0207703_1023035613300026035Switchgrass RhizosphereVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTG
Ga0207703_1170992413300026035Switchgrass RhizosphereRAVLAEKAPVVQQQVRKMVSDATPVVQQQVAKARNVLAEKAPPVERTLREKPGVVAAVAVALVALLIFSSRKK
Ga0207639_1088588523300026041Corn RhizosphereKGKAVYAEKAPPAVQHKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Ga0207708_1005048543300026075Corn, Switchgrass And Miscanthus RhizosphereVYAEKAPPAVQHKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Ga0207702_1048744013300026078Corn RhizosphereVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Ga0207641_1256939323300026088Switchgrass RhizosphereQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0207676_1158122413300026095Switchgrass RhizosphereVVQHHVNKAVADARPVVQQKVARAQGLLADTAPPVERTLREKPRLVAGVAVALVVLLIAFSRKKSA
Ga0207675_10025543333300026118Switchgrass RhizosphereQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKTA
Ga0207698_1186113023300026142Corn RhizosphereYADKAPVVQHHVNKAVADARPVVQQKVARAQGLLADTAPPVERTLRERPRLVAGVAVALVVLLIAFSRKKSA
Ga0207698_1234946223300026142Corn RhizosphereQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAQKAPPVERTLREKPGVVAGVVVALVVLLIVTSRKRKNA
Ga0209574_1005427133300027809AgaveQQQVAKAQTVLAEKASPVERTLREKPGVVAAVTTALVALLIFASRKKG
Ga0268266_1149259413300028379Switchgrass RhizosphereEKAPVVQQQVRKMVSDATPVVQQQVAKARNVLAEKAPPVERTLREKPGVVAAVAVALVALLIFSSRKK
Ga0247823_1118263923300028590SoilVQRGVDQAVEKGKAVYAEKAPVVQQHVHKAVADAKPVVQEKVARGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKKTA
Ga0247822_1056377733300028592SoilPESGPPAVQQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0307297_1002032643300028754SoilPGVQQQVSKMVSDATPVVQQQVAKARNVLAEKASPVERTLREKPGVVAAVAVALVALLIFSSRKK
Ga0247824_1105678023300028809SoilKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0247825_1040737323300028812SoilVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAEKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA
Ga0247825_1087275623300028812SoilKAVADAKPVVQEKVAQAKAVYVEKAPPAVQRTLDQRPGLVVGVAAALVVLLIGLARKAKKKA
Ga0307300_1022389723300028880SoilPPAVQQKVDQAVENGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAQKAPPVERTLREKPGLVAGIAVALVVLLIVTSRKRKNA
Ga0308197_1045170223300031093SoilVVQQHVHKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLVAGVAVALVVLLIVTSRKRKNA
Ga0310887_1100913223300031547SoilPVVQQHVHKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKKTA
Ga0308175_10296656313300031938SoilVQQKVDQAVEKGKAVYAEKAPVVQQHVNKAVADARPVVQEKVAQGHALLAQKAPPVERTLREKPGVVAGVAVALVVLLIVTSRKRKNA
Ga0307409_10177535023300031995RhizosphereERVEHARTVVAEKAPVVQQQVSKAVSDATPVVQQQVAKAQSVLAKKAAPVERTLREKPGVVAAVAVALVALLILSSRKKK
Ga0307414_1208110923300032004RhizosphereKAPVVQQQVSKAVSDATPVVQQQVAKAQSVLAKKAAPVERTLREKPGVVAAVAVALVALLILSSRKKK
Ga0326721_1010039913300032080SoilQAVDKGKAVYAEKAPVVQQQVHKAVTDARPVVQEKVAQGQALLAEKAPPVERTLREKPGLVAGIAVALVVLLIATSRKKKNT
Ga0247829_1062589213300033550SoilYAEKAPPAVQRGVDQAVEKGKAVYAEKAPVVQQHVHKAVADAKPVVQEKVAQGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKKTA
Ga0247830_1038064333300033551SoilVEKGKAVYAEKAPVVQQHVHKAVADAKPVVQEKVARGQALLAEKAPPVERTLREKPGLIAGIAVALVVLLIATSRKKKKTA
Ga0247830_1119581513300033551SoilAPVVQQHVNKAVADARPVVQEKMAQGHALLAQKAPPVERTLREKPGVVAGIAVALVVLLILTSRKRKNA
Ga0334919_088139_203_5023300034001Hypolithic BiocrustVYAEKAPPAVQARVDQAVTRGRAVYAEKAPVVQQQVNKAVADAKPVVQEKVAQARSVYAEKAPPALQRTLDQRPGLVVGVAGALVVLLIGLARKAKKKA
Ga0334915_111097_1_2913300034132Hypolithic BiocrustYTEKAPPVVRRGVDQAVTRGRAVYAQRAPVVQQQVNKVVADARPAVQQRVAQAQGLLTEKAQPVERTLREKPGLVAGVAVALVALLIGTSRVGKNA
Ga0372943_1016901_3_2333300034268SoilKAVYADKAPVVSQHVNKAVADARPVVQEKVAQAQGLLADKAPPVERTLREKPGIVAAVAVALVVLLIARSGKKKSV
Ga0314783_096725_1_3033300034662SoilGKAVYAEKAPPAVQQKVDQAVEKGKAVYAEKAPVVAQHVNKAVSDARPVVQEKVAQGQALLAQKAPPVERTLREKPGLVAGIAVALVVLLIATSRKRKNA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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