Metagenome / Metatranscriptome Family F093877

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093877
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	63 residues
Representative Sequence	MAVLPATGTEIVMGRVRKAYNNVAAGAGQNITLSGTLGAYMGQGAGTQISLSSRFGGQTTPYAY
Number of Associated Samples	46
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.79 %
% of genes near scaffold ends (potentially truncated)	15.09 %
% of genes from short scaffolds (< 2000 bps)	53.77 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.377 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine (27.359 % of family members)
Environment Ontology (ENVO)	Unclassified (42.453 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (47.170 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13884	Peptidase_S74	46.23
PF00293	NUDIX	11.32
PF06941	NT5C	1.89
PF01192	RNA_pol_Rpb6	0.94
PF00487	FA_desaturase	0.94
PF04984	Phage_sheath_1	0.94
PF13385	Laminin_G_3	0.94
PF10528	GLEYA	0.94
PF03420	Peptidase_S77	0.94
PF13772	AIG2_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	1.89
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.94
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	0.94
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.94
COG3497	Phage tail sheath protein FI	Mobilome: prophages, transposons [X]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
All Organisms	root	All Organisms	39.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Viruses	superkingdom	All Organisms → Viruses	33.02 %
cellular organisms	root	All Organisms → cellular organisms	6.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	31.13 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	31.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	31.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.83 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	31.13 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.94 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	29.25 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.94 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.94 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.94 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.25 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.94 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.94 %
Myoviridae sp. ctWb16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctWb16	0.94 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.25 %
unclassified Sphingobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium	1.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.94 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.94 %
Myoviridae sp. ctWb16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctWb16	0.94 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.38 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29.25 %
Sphingobium sp. MI1205	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. MI1205	1.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	0.94 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	0.94 %
Myoviridae sp. ctWb16	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctWb16	0.94 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003277\|JGI25908J49247_10000011	Not Available	55497	Open in IMG/M
3300004790\|Ga0007758_10097793	Not Available	855	Open in IMG/M
3300004836\|Ga0007759_11544655	Not Available	1139	Open in IMG/M
3300005662\|Ga0078894_10183512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1890	Open in IMG/M
3300005662\|Ga0078894_10290907	Not Available	1482	Open in IMG/M
3300005662\|Ga0078894_10555164	Not Available	1027	Open in IMG/M
3300005662\|Ga0078894_10972943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	732	Open in IMG/M
3300005758\|Ga0078117_1051898	Not Available	1852	Open in IMG/M
3300005941\|Ga0070743_10012797	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2950	Open in IMG/M
3300006484\|Ga0070744_10005969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. MI1205	3652	Open in IMG/M
3300006484\|Ga0070744_10012063	Not Available	2564	Open in IMG/M
3300006484\|Ga0070744_10014442	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2341	Open in IMG/M
3300006484\|Ga0070744_10019271	Not Available	2027	Open in IMG/M
3300006484\|Ga0070744_10031665	Not Available	1563	Open in IMG/M
3300006484\|Ga0070744_10060416	Not Available	1106	Open in IMG/M
3300006484\|Ga0070744_10065881	Not Available	1054	Open in IMG/M
3300006484\|Ga0070744_10094244	Not Available	866	Open in IMG/M
3300006484\|Ga0070744_10118630	Not Available	763	Open in IMG/M
3300006484\|Ga0070744_10137400	Not Available	702	Open in IMG/M
3300006484\|Ga0070744_10151324	Not Available	665	Open in IMG/M
3300007177\|Ga0102978_1385696	Not Available	1753	Open in IMG/M
3300007520\|Ga0105054_10912316	Not Available	622	Open in IMG/M
3300007555\|Ga0102817_1060345	Not Available	828	Open in IMG/M
3300007559\|Ga0102828_1007064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	2224	Open in IMG/M
3300007559\|Ga0102828_1019747	Not Available	1456	Open in IMG/M
3300007559\|Ga0102828_1105235	Not Available	688	Open in IMG/M
3300007559\|Ga0102828_1154832	Not Available	576	Open in IMG/M
3300007559\|Ga0102828_1163110	Not Available	562	Open in IMG/M
3300009026\|Ga0102829_1003474	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4329	Open in IMG/M
3300009026\|Ga0102829_1294692	Not Available	539	Open in IMG/M
3300009059\|Ga0102830_1018992	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2169	Open in IMG/M
3300009164\|Ga0114975_10001285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17995	Open in IMG/M
3300009164\|Ga0114975_10007111	Not Available	7147	Open in IMG/M
3300009164\|Ga0114975_10013784	Not Available	4986	Open in IMG/M
3300009164\|Ga0114975_10017571	Not Available	4368	Open in IMG/M
3300009164\|Ga0114975_10245747	Not Available	1002	Open in IMG/M
3300009180\|Ga0114979_10001607	Not Available	15269	Open in IMG/M
3300009180\|Ga0114979_10002095	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13463	Open in IMG/M
3300009180\|Ga0114979_10006897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7458	Open in IMG/M
3300009180\|Ga0114979_10163695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1359	Open in IMG/M
3300009182\|Ga0114959_10078782	Not Available	1840	Open in IMG/M
3300009183\|Ga0114974_10807312	Not Available	503	Open in IMG/M
3300009419\|Ga0114982_1005546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4855	Open in IMG/M
3300010157\|Ga0114964_10000001	Not Available	340358	Open in IMG/M
3300010334\|Ga0136644_10371512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	816	Open in IMG/M
3300010354\|Ga0129333_10008771	Not Available	9565	Open in IMG/M
3300010354\|Ga0129333_10069136	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3281	Open in IMG/M
3300010354\|Ga0129333_10247825	Not Available	1606	Open in IMG/M
3300010354\|Ga0129333_10557450	Not Available	999	Open in IMG/M
3300010354\|Ga0129333_10732313	Not Available	848	Open in IMG/M
3300010370\|Ga0129336_10493230	Not Available	661	Open in IMG/M
3300010885\|Ga0133913_10227734	All Organisms → cellular organisms → Bacteria	4957	Open in IMG/M
3300010885\|Ga0133913_11423994	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1761	Open in IMG/M
3300012346\|Ga0157141_1022361	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	816	Open in IMG/M
3300012348\|Ga0157140_10001957	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Myoviridae sp. ctWb16	2343	Open in IMG/M
3300012352\|Ga0157138_1000101	Not Available	23509	Open in IMG/M
3300012352\|Ga0157138_1000145	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18916	Open in IMG/M
3300012352\|Ga0157138_1015681	Not Available	1226	Open in IMG/M
3300012664\|Ga0157497_1000429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8438	Open in IMG/M
3300012770\|Ga0138291_1094676	Not Available	996	Open in IMG/M
3300012772\|Ga0138287_1189248	Not Available	621	Open in IMG/M
3300013295\|Ga0170791_15816749	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	986	Open in IMG/M
3300013372\|Ga0177922_10838414	All Organisms → Viruses → Predicted Viral	1322	Open in IMG/M
3300017761\|Ga0181356_1122884	Not Available	827	Open in IMG/M
3300019784\|Ga0181359_1167648	Not Available	738	Open in IMG/M
3300021963\|Ga0222712_10141500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1634	Open in IMG/M
3300021963\|Ga0222712_10242853	Not Available	1156	Open in IMG/M
3300021963\|Ga0222712_10713323	Not Available	563	Open in IMG/M
3300024346\|Ga0244775_10003762	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16043	Open in IMG/M
3300024346\|Ga0244775_10004830	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13814	Open in IMG/M
3300024346\|Ga0244775_10005903	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12322	Open in IMG/M
3300024346\|Ga0244775_10017006	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6709	Open in IMG/M
3300024346\|Ga0244775_10017616	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6579	Open in IMG/M
3300024346\|Ga0244775_10039058	Not Available	4190	Open in IMG/M
3300024346\|Ga0244775_10067773	Not Available	3067	Open in IMG/M
3300024346\|Ga0244775_10074915	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2898	Open in IMG/M
3300024346\|Ga0244775_10097336	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2503	Open in IMG/M
3300024346\|Ga0244775_10113835	Not Available	2295	Open in IMG/M
3300024346\|Ga0244775_10132406	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2109	Open in IMG/M
3300024346\|Ga0244775_10225818	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1565	Open in IMG/M
3300024346\|Ga0244775_10245427	Not Available	1493	Open in IMG/M
3300024346\|Ga0244775_10384652	Not Available	1155	Open in IMG/M
3300024346\|Ga0244775_11205616	Not Available	589	Open in IMG/M
3300024346\|Ga0244775_11241533	Not Available	579	Open in IMG/M
3300027631\|Ga0208133_1002037	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6749	Open in IMG/M
3300027708\|Ga0209188_1015243	Not Available	4127	Open in IMG/M
3300027732\|Ga0209442_1000022	Not Available	89871	Open in IMG/M
3300027763\|Ga0209088_10001824	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13463	Open in IMG/M
3300027763\|Ga0209088_10002174	Not Available	12196	Open in IMG/M
3300027763\|Ga0209088_10010552	Not Available	5002	Open in IMG/M
3300027763\|Ga0209088_10038115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. MI1205	2389	Open in IMG/M
3300027763\|Ga0209088_10060474	Not Available	1815	Open in IMG/M
3300027763\|Ga0209088_10133255	Not Available	1111	Open in IMG/M
3300027797\|Ga0209107_10087514	Not Available	1689	Open in IMG/M
3300027963\|Ga0209400_1137529	Not Available	1081	Open in IMG/M
3300027969\|Ga0209191_1003404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9498	Open in IMG/M
3300027969\|Ga0209191_1004448	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8132	Open in IMG/M
3300027969\|Ga0209191_1088236	Not Available	1341	Open in IMG/M
3300028392\|Ga0304729_1000001	Not Available	340548	Open in IMG/M
3300034050\|Ga0335023_0004910	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7935	Open in IMG/M
3300034050\|Ga0335023_0217023	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1064	Open in IMG/M
3300034082\|Ga0335020_0333562	Not Available	739	Open in IMG/M
3300034104\|Ga0335031_0049218	All Organisms → Viruses → Predicted Viral	3041	Open in IMG/M
3300034104\|Ga0335031_0081973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	2291	Open in IMG/M
3300034104\|Ga0335031_0324976	Not Available	992	Open in IMG/M
3300034104\|Ga0335031_0461262	Not Available	782	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.06%
Terrestrial	Environmental → Terrestrial	0.94%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	54.72%
Marine	Environmental → Aquatic → Marine	44.34%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.94%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	37.74%
Unclassified	Environmental → Aquatic → Marine → Unclassified	30.19%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.38%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.49%
Lotic	Environmental → Aquatic → Freshwater → Lotic	5.66%
Coastal	Environmental → Aquatic → Marine → Coastal	5.66%
Ice	Environmental → Aquatic → Freshwater → Ice	0.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.74%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	30.19%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.43%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	8.49%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	5.66%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.66%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.94%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.94%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	27.36%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	27.36%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.43%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	8.49%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.60%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	5.66%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	5.66%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.94%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.94%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.94%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300004790	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004836	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007177	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projects	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007555	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010334	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012346	Freshwater microbial communities from Emily Creek, Ontario, Canada - S29	Environmental	Open in IMG/M
3300012348	Freshwater microbial communities from Coldwater Creek, Ontario, Canada - S44	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012664	Freshwater microbial communities from Zephyr Creek, Ontario, Canada - S17	Environmental	Open in IMG/M
3300012770	Freshwater microbial communities from Lake Simoncouche, Canada - S_140625_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012772	Freshwater microbial communities from Lake Simoncouche, Canada - S_130826_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25908J49247_100000115	3300003277	Freshwater Lake	MALLPATGTEIVMGRVKQAYTNVAAGAGQNISLSGTLGGFVGQAASTQITLSSRFGGQTTPYAY*
Ga0007758_100977931	3300004790	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGSLGPFKGRSAGNQISMSSTFGGATTPYAY*
Ga0007759_115446552	3300004836	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGSLGPFKGRSAGNQISMSSTFGGATT
Ga0078894_101835121	3300005662	Freshwater Lake	MAVLPATGSEIVMGRIRRAHGNQSYPPAAGTNITLSGTLGGLVGQGQGSQISLSARFGGRLTPFNY*
Ga0078894_102909073	3300005662	Freshwater Lake	MAVLPATGSEIVMGRVRKAYNNVAPAAGQNISLSGTLGAFRGQSPGTQISISSRFGGQNTPYAY*
Ga0078894_105551642	3300005662	Freshwater Lake	MALLPATGSEIAMGKVRKAYNNVAPAAGQNITLSGVLGPYKGRSSGTQISFSSTFGGATVPYTY*
Ga0078894_109729432	3300005662	Freshwater Lake	SEIAMGRVRKAYNNVAPAAGQNISLSSTLGPYKGRSSGTQISFSSTFGGATVPYTY*
Ga0078117_10518983	3300005758	Lake Water	MAVLPATGTEIVMGRVKKSYSNVAAAAGQNISLSGTLGGYVGQAASTQISLSSRFGGRNTPYAY*
Ga0070743_100127972	3300005941	Estuarine	MALLPATGSEMAIGRVRKAYNNVAPAAGQNISLSATLGASYGGKAAGTQISLTATFGGNTVPYAY*
Ga0070744_100059693	3300006484	Estuarine	MAVLPATGSEIVVGRVKRAYTNVAAAGGQNITLSGTLGGFMGQNAGTQISLSTRFGGQITPYTY*
Ga0070744_100120634	3300006484	Estuarine	MAVLPATGTEIVMGRVKAAYSNVAAGAGQNISLSGTLGGFIGQGAGTSITLSSTFGGRTIPYAY*
Ga0070744_100144423	3300006484	Estuarine	MAVLPATGTEIVMGRVRKAYNNVAPGAGQNISLSGTLGSFIGQSSGTQITLSSRFGGRTIPYAY*
Ga0070744_100192712	3300006484	Estuarine	MALLPATGTEIVMGRVKQAYTNVAAGAGQNISLSGTLGAFVGQAASTQITLSSRFGGQTTPYAY*
Ga0070744_100316652	3300006484	Estuarine	MALLPATGTEIVMGRVKASYSNVAAAADQNISLSGTLGGYIGQSPSTSITLSATFGGRTTPYAY*
Ga0070744_100604162	3300006484	Estuarine	MAVLPATGTEIVMGRVRKAYNNTAAAAGQNISLRGTLGGFIGQASGAITLSSTFGGRTIPYAY*
Ga0070744_100658811	3300006484	Estuarine	MALLPATGSEIAMGKVRKAYNNVAPAAGQNISLSSTLGPFKGRSAGTAISFSSTFGGATVPYTY*
Ga0070744_100942442	3300006484	Estuarine	MAVLPATGTEIVMGRVRTAYNNAAPAASQNISLSGTLGGFIGQSAGTSITLSSTFGGRTIPYAY*
Ga0070744_101186302	3300006484	Estuarine	MAVLPATGTEIVMGRVKAAYSNVAAAAGQNISLSGTLGGYIGQAGSTQITLSATFGGRTIPYAY*
Ga0070744_101374002	3300006484	Estuarine	MALLPATGSEITMGKVQKGYSNITASAGSNLTLSSTLGPYKGKSTGTQISLSSTFGGATTPYNF*
Ga0070744_101513241	3300006484	Estuarine	MALLPATGTEITMGKVRKGFSNASPAASQNITLSGTLGPYKGKTPGTAISLSSTFGGATTPYVF*
Ga0102978_13856964	3300007177	Freshwater Lake	MAVLPATGSEIVMGRVKQGYSNVAPAAGQNITLSGTLGGYVGQTAGTQISLSSRFGGRLTPYAY*
Ga0105054_109123162	3300007520	Freshwater	TNRRFKMAILPSTGSEKTMGRVRKSFNNAAQAAGQNITLSGTLGAFRGQAAGTQISLSSAFGGRTTPFNY*
Ga0102817_10603452	3300007555	Estuarine	GTEIVMGRVRKAYNNTAPAAGQNISLRGTLGGFIGQASGAITLSSTFGGRTIPYAY*
Ga0102828_10070643	3300007559	Estuarine	MALLPATGSEIAMGKVRKAYNNVAPAAGQNITLSAALGPYKGKSAGTQISFSSTFGGATVPYTY*
Ga0102828_10197473	3300007559	Estuarine	MALLPATGSEITMGKVRKGYSNITASAGSNLTLSSTLGPYKGKSSGTQISLSSTFGGATTPYNF*
Ga0102828_11052352	3300007559	Estuarine	MALLPATGTEIVMGRVRKAYNNVAPAAGQNISLRSTLGGLVGQSTGAITLSSTFGGRTTPYAY*
Ga0102828_11548322	3300007559	Estuarine	MAVLPATGTEIVMGRVRKAYNNVAPAAGQNISLSGTLGAFVGQSASTQITLSSRFGGQTIPYAY*
Ga0102828_11631102	3300007559	Estuarine	MAVLPATGSEIVVGRVKRAYTNVEAAGGQNITLSGTLGGFMGQNAGTQISLSTRFGGQITPYTY*
Ga0102829_10034742	3300009026	Estuarine	MALLPATGSEIAMGKVRKAYNNVAPAAGQNISLSSALGPFKGRSAGTAISFSSTFGGATVPYTY*
Ga0102829_12946921	3300009026	Estuarine	MALLPATGSEITMGKVRKGYSNTTASAGSNLTLSSTLGPYKGKSSGTQISLSSTFGGATTPYNF*
Ga0102830_10189922	3300009059	Estuarine	MALLPATGSEMAIGRVRKAYNNVAPAAGQNISLSATLGASYGGKAAGTQISLTATFGGKTVPYAY*
Ga0114975_100012859	3300009164	Freshwater Lake	MALLPATGTEIVMGRVKAAYSNVAAAAGQNISLSGTLGGYIGQAGSTQITLSATFGGRTTPYAY*
Ga0114975_100071117	3300009164	Freshwater Lake	MAILPATGSEIVMGRVRKAYTNITPAGGQNISLSGTLGAFMGQAAGTQLSISSRFGGQPTPYAY*
Ga0114975_100137842	3300009164	Freshwater Lake	MALLPATGTEIVMGRVRKAYNNVTPAAGQNIALSGSLASNVGQASGTQISLSSRFGGQTTPYAY*
Ga0114975_100175712	3300009164	Freshwater Lake	MSVLPATGSEIVMGRVKKGYSNVAAAAGQNISLSGTLGGYIGQSPSTQISLSSRLGGRLSPYLY*
Ga0114975_102457472	3300009164	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPAAGQNITLSGTLGPYKGRSSGVQISMSSTFGGATSPYAY*
Ga0114979_100016072	3300009180	Freshwater Lake	MALLPATGTEIAMGKIRKAYNNVAPGAGQNITLSGTLGPNKGRSSGVQISMSSTFGGSTVPYTY*
Ga0114979_1000209512	3300009180	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGSLGPYKGRSAGNQISMSSTFGGATSPYAY*
Ga0114979_100068975	3300009180	Freshwater Lake	MAVLPATGTEIVMGRVKAAYSNVAAAGGQNISLSGTLGGYIGQGAGTSITLSSTFGGRTIPYAY*
Ga0114979_101636953	3300009180	Freshwater Lake	MALLPATGTEIVMGRVKSSYTNSAAGSGQNISLRGTLGGYIGQSTGSLALSSTFGGRTVPYAY*
Ga0114959_100787823	3300009182	Freshwater Lake	MALLPATGTEIVMGRVKKAYTNSAAAAGQNISLRGTLGGYIGQSTGSLAMSSTFGGRTVPYAY*
Ga0114974_108073121	3300009183	Freshwater Lake	INKVHRRFHMALLPATGTEIVMGRVKQAYTNVAAAAGQNISLSGTLGGFVGQAASTQITLSSRFGGQTTPYAY*
Ga0114982_10055463	3300009419	Deep Subsurface	MSVLPATGSEIVMGRVKQAYSNVAPGSGQNISLSGTLGGYLGQSSGTQLSMSSRFGGRLTPYTY*
Ga0114964_10000001401	3300010157	Freshwater Lake	MAILPATGTEIVMGRVKKAYSNVAAAGGQNIRLSATLGAYVGQSASTQISLSSRFGGQTIPYTY*
Ga0136644_103715122	3300010334	Freshwater Lake	MAILPATGTEIVMGRVKKAYSNVAAAGGQNIRLSATLGAYVGQSASTQISLSSRFGGQTIPYT
Ga0129333_100087714	3300010354	Freshwater To Marine Saline Gradient	MAVLPATGSEIAMGRVKQSYTNVAAAAGQNITLSGTIGGYVGQASGTQISFSARMGGQFTPYNY*
Ga0129333_100691363	3300010354	Freshwater To Marine Saline Gradient	MAILPATGSEIVMGRVKQAYTNAAPGAGQNITLSGTLGAYMGHTAGTQISLSSRFGGQTTPYAY*
Ga0129333_102478252	3300010354	Freshwater To Marine Saline Gradient	MAILPATGSEIVMGRVRKAYNNVAAAAGQNITLSGTLGGYVGQSAATQISLSSRFGGQITPYAY*
Ga0129333_105574501	3300010354	Freshwater To Marine Saline Gradient	MAILPATGSEIVMGRVKASYTNVAAAGGQNISLSGTLGSYVGQAAGTQISLSSRFGGQVTPYAY*
Ga0129333_107323132	3300010354	Freshwater To Marine Saline Gradient	MPILPATGTEITMGRVHQSKTNTAVSAGSNLALSGTMAAHIGQSSGTQISLSSAFGGRTFPYTY*
Ga0129336_104932302	3300010370	Freshwater To Marine Saline Gradient	LPATGSEIAMGRVKQSYTNVAAAADQNITLSGTIGGYVGQASGTQISFSARMGGQFTPYNY*
Ga0133913_102277346	3300010885	Freshwater Lake	MSVLPATGSEIVMGRVKKGYSNVAAAAGQNISLSGTLGGYIGQSPSTQISLSSRFGGRLSPYLY*
Ga0133913_114239941	3300010885	Freshwater Lake	MAVLPATGTEIVMGRVRKAYNNVAAGAGQNITLSGTLGAYMGQGAGTQISLSSRFGGQTTPYAY*
Ga0157141_10223612	3300012346	Freshwater	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGTLGPYKGKSSGSSISMSSTFGGSTSPYAY*
Ga0157140_100019571	3300012348	Freshwater	ATGTEIVMGRVRKAYNNVAPGAGQNISLSGTLGAFVGQSSGTQITLSSRFGGQTTPYAY*
Ga0157138_100010110	3300012352	Freshwater	MALLPATGTEIVMGRVRKAYNNVAPGAGQNIALSGTLAPNVGQSSGTQISLSSRFGGQTTPYAY*
Ga0157138_100014517	3300012352	Freshwater	MALLPATGSEIAMGKVRKAYNNVAPAAGQNITLSGTLGPYKGRSSGTQISMSSTFGGATVPYTY*
Ga0157138_10156813	3300012352	Freshwater	MALLPATGTEIVMGRVRRAYGNQPYPPAAGTNITLSSTLGSLVGQSSGTQISLSSRFGGRTVPYNH*
Ga0157497_10004295	3300012664	Freshwater	MALLPATGTEIVMGRVRKAYTNTAPGAGQNITLSGTLGGLIGQSSGTQISLSSRFGGRTTPYAY*
Ga0138291_10946763	3300012770	Freshwater Lake	MALLPATGTEIVMGRVKSSYTNSAAGAGQNISLRGTLGGYIGQSTGSLALSSTFGGRTVPYAY*
Ga0138287_11892481	3300012772	Freshwater Lake	MALLPATGTEIAMGKIRKAYNNVAPGAGQNITLSGTLGPNKGRSSGVQISMSSTFGGSTV
Ga0170791_158167491	3300013295	Freshwater	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGSLGPYKGRSAGNQISMSSTFGGATS
Ga0177922_108384143	3300013372	Freshwater	MALLPATGTEIVMGRVKQAYTNVAAGAGQNISLSGTLGGFVGQAASTQITLSSRFGGQTTPY
Ga0181356_11228842	3300017761	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGSLGPFKGRSAGNQISMSSTFGGATSPYAY
Ga0181359_11676482	3300019784	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGSLGPFKGRSAGNQISMSSTFGGATTPYAY
Ga0222712_101415002	3300021963	Estuarine Water	MALLPATGTEIVMGRVRKAYNNVAPGAGQNIALSGTLAPNVGQSSGTQISLSSRFGGQTTPYAY
Ga0222712_102428533	3300021963	Estuarine Water	MAVLPATGSEIVMGRVKAAYTNAAAGAGQNISLSGTLGAYRGQSPGTQLSISSRFGGQNTPYAY
Ga0222712_107133232	3300021963	Estuarine Water	MSVLPATGSEIVMGRVKQAYSNVAPGSGQNISLSGTLGGYLGQSSGTQLSMSSRFGGRLTPYTY
Ga0244775_100037622	3300024346	Estuarine	MAVLPATGTEIVMGRVRTAYNNAAPAASQNISLSGTLGGFIGQSAGTSITLSSTFGGRTIPYAY
Ga0244775_1000483010	3300024346	Estuarine	MALLPATGSEIAMGKVRKAYNNVAPAAGQNISLSSTLGPFKGRSAGTAISFSSTFGGATVPYTY
Ga0244775_100059039	3300024346	Estuarine	MALLPATGSEMAIGRVRKAYNNVAPAAGQNISLSATLGASYGGKAAGTQISLTATFGGNTVPYAY
Ga0244775_100170064	3300024346	Estuarine	MALLPATGTEIVMGRVKQAYTNVAAGAGQNISLSGTLGAFVGQAASTQITLSSRFGGQTTPYAY
Ga0244775_100176162	3300024346	Estuarine	MAVLPATGTEIVMGRVRKAYNNVAPGAGQNISLSGTLGSFIGQSSGTQITLSSRFGGRTIPYAY
Ga0244775_100390586	3300024346	Estuarine	MALLPATGTEIVMGRVRKAYNNVAPAAGQNISLRSTLGGLVGQSTGAITLSSTFGGRTTPYAY
Ga0244775_100677733	3300024346	Estuarine	MAVLPATGTEIVMGRVKAAYSNVAAGAGQNISLSGTLGGFIGQGAGTSITLSSTFGGRTIPYAY
Ga0244775_100749156	3300024346	Estuarine	MALLPATGTEIVMGRVRKAYNNVTPAAGQNIALSGSLASNVGQSSGTQISLSSRFGGQTTPYAY
Ga0244775_100973362	3300024346	Estuarine	MAVLPATGSEIVVGRVKRAYTNVEAAGGQNITLSGTLGGFMGQNAGTQISLSTRFGGQITPYTY
Ga0244775_101138355	3300024346	Estuarine	MALLPATGSEITMGKVRKGYSNITASAGSNLTLSSTLGPYKGKSSGTQISLSSTFGGATTPYNF
Ga0244775_101324061	3300024346	Estuarine	MALLPATGSEITMGKVQKGYSNITASAGSNLTLSSTLGPYKGKSTGTQISLSSTFGGATTPYNF
Ga0244775_102258182	3300024346	Estuarine	MAVLPATGTEIVMGRVRKAYNNTAAAAGQNISLRGTLGGFIGQASGAITLSSTFGGRTIPYAY
Ga0244775_102454273	3300024346	Estuarine	MAVLPATGTEIVMGRVKAAYSNVAAAAGQNISLSGTLGGYIGQAGSTQITLSATFGGRTIPYAY
Ga0244775_103846523	3300024346	Estuarine	MAVLPATGTEIVMGRVKAAYSNVAAAAGQNISLSGTLGGYIGQSPSTSITLSATFGGRTSPYAY
Ga0244775_112056161	3300024346	Estuarine	MALLPATGTEIVMGRVKQAYTNVAAGAGQNISLSGTLGGFVGQAASTEITLSARFGGQTTPYAY
Ga0244775_112415332	3300024346	Estuarine	MAILPATGSEIVMGRVKKAYTNVAAGAGQNITLSGTLGGFLGQGSGTQISISSRFGGRSTPYAY
Ga0208133_10020372	3300027631	Estuarine	MAVLPATGSEIVVGRVKRAYTNVAAAGGQNITLSGTLGGFMGQNAGTQISLSTRFGGQITPYTY
Ga0209188_10152435	3300027708	Freshwater Lake	MALLPATGTEIVMGRVKKAYTNSAAAAGQNISLRGTLGGYIGQSTGSLAMSSTFGGRTVPYAY
Ga0209442_10000225	3300027732	Freshwater Lake	MALLPATGTEIVMGRVKQAYTNVAAGAGQNISLSGTLGGFVGQAASTQITLSSRFGGQTTPYAY
Ga0209088_1000182413	3300027763	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPGAGQNITLSGSLGPYKGRSAGNQISMSSTFGGATSPYAY
Ga0209088_100021742	3300027763	Freshwater Lake	MALLPATGTEIAMGKIRKAYNNVAPGAGQNITLSGTLGPNKGRSSGVQISMSSTFGGSTVPYTY
Ga0209088_100105524	3300027763	Freshwater Lake	MALLPATGTEIVMGRVKSSYTNSAAGAGQNISLRGTLGGYIGQSTGSLALSSTFGGRTVPYAY
Ga0209088_100381152	3300027763	Freshwater Lake	MAILPATGSEIVMGRVRKAYTNITPAGGQNISLSGTLGAFMGQAAGTQLSISSRFGGQPTPYAY
Ga0209088_100604742	3300027763	Freshwater Lake	MAILPATGTEIAMGRIRKAYNNVAPAAGQNITLSGTLGPYKGRSSGVQISMSSTFGGATSPYAY
Ga0209088_101332553	3300027763	Freshwater Lake	MAVLPATGTEIVMGRVKAAYSNVAAAGGQNISLSGTLGGYIGQGAGTSITLSSTFGGRTIPYAY
Ga0209107_100875143	3300027797	Freshwater And Sediment	MALLPATGSEIVMGRVKQAYTNVAAGAGQNISLSGTLGGFVGQAAGTQITLSSRFGGQTTPYAY
Ga0209400_11375291	3300027963	Freshwater Lake	MAVLPATGTEIVMGRVRKAYNNVAASAGQNITLSGTLGAYMGQSAGTQISLSSRF
Ga0209191_10034047	3300027969	Freshwater Lake	MALLPATGTEIVMGRVRKAYNNVTPAAGQNIALSGSLASNVGQASGTQISLSSRFGGQTTPYAY
Ga0209191_10044486	3300027969	Freshwater Lake	MALLPATGTEIVMGRVKAAYSNVAAAAGQNISLSGTLGGYIGQAGSTQITLSATFGGRTTPYAY
Ga0209191_10882363	3300027969	Freshwater Lake	RIRKAYNNVAPGAGQNITLSGSLGPYKGRSAGNQISMSSTFGGATSPYAY
Ga0304729_1000001101	3300028392	Freshwater Lake	MAILPATGTEIVMGRVKKAYSNVAAAGGQNIRLSATLGAYVGQSASTQISLSSRFGGQTIPYTY
Ga0335023_0004910_1_159	3300034050	Freshwater	MGRVRKAYNNVAPGAGQNITLSANLGPYKGKAAGTAISMSSTIGGATSPYVY
Ga0335023_0217023_879_1064	3300034050	Freshwater	MALLPATGSEITMGRVRKAYNNVAPGAGQNITLSANLGPYKGKAAGTAISMSSTFGGATSPY
Ga0335020_0333562_455_646	3300034082	Freshwater	MALLPATGTEIVMGRVRKAYNNVAPAAGQNISLRGTLGALVGQSTGAITLSSTFGGRTTPYAH
Ga0335031_0049218_2412_2606	3300034104	Freshwater	MAVLPATGSEIAMGRVKQSYTNVAAAAGQNITLSGTIGGYVGQASGTQISFSARMGGQFTPYNY
Ga0335031_0081973_529_723	3300034104	Freshwater	MPLLPATGSEITMGRVYTAFTNTTPSAGSNISLSSTLGPLKGVSPGSQISMSSTFGGATTPYTF
Ga0335031_0324976_385_579	3300034104	Freshwater	MAILPATGSEIVMGRVKASYTNVAAAGGQNISLSGTLGSYVGQAAGTQISLSSRFGGQVTPYAY
Ga0335031_0461262_351_545	3300034104	Freshwater	MPLLPATGSEMTMGAVYKAFTNTTASAGSNVSLSATLGPYKGVAAGNQISMSATFGGATTPYTF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093877

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences