NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F093557

Metagenome / Metatranscriptome Family F093557

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F093557
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 78 residues
Representative Sequence LAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQIRNC
Number of Associated Samples 101
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 24.53 %
% of genes near scaffold ends (potentially truncated) 50.94 %
% of genes from short scaffolds (< 2000 bps) 96.23 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (51.887 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(19.811 % of family members)
Environment Ontology (ENVO) Unclassified
(32.075 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.340 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.16
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01514YscJ_FliF 23.58
PF13860FlgD_ig 15.09
PF13861FLgD_tudor 2.83
PF03054tRNA_Me_trans 0.94
PF08345YscJ_FliF_C 0.94
PF02120Flg_hook 0.94
PF14842FliG_N 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG1766Flagellar biosynthesis/type III secretory pathway M-ring protein FliF/YscJCell motility [N] 1.89
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.94
COG3144Flagellar hook-length control protein FliKCell motility [N] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A51.89 %
All OrganismsrootAll Organisms48.11 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908009|FWIRA_GRAM18402IVRAINot Available500Open in IMG/M
3300000897|JGI12167J12862_101905Not Available548Open in IMG/M
3300001182|JGI12668J13544_1010738Not Available504Open in IMG/M
3300001538|A10PFW1_12395412All Organisms → cellular organisms → Bacteria → Proteobacteria1126Open in IMG/M
3300001664|P5cmW16_1056435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus672Open in IMG/M
3300002568|C688J35102_119078264Not Available635Open in IMG/M
3300002906|JGI25614J43888_10206794Not Available532Open in IMG/M
3300005179|Ga0066684_11012599Not Available536Open in IMG/M
3300005339|Ga0070660_101047852All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales690Open in IMG/M
3300005344|Ga0070661_100325031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1202Open in IMG/M
3300005455|Ga0070663_101916230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella anthropi532Open in IMG/M
3300005518|Ga0070699_100687444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales934Open in IMG/M
3300005564|Ga0070664_100785476All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales890Open in IMG/M
3300005587|Ga0066654_10355247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales796Open in IMG/M
3300005840|Ga0068870_11386601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Brucellaceae → Brucella/Ochrobactrum group → Brucella → Brucella anthropi514Open in IMG/M
3300006046|Ga0066652_101320121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales679Open in IMG/M
3300006797|Ga0066659_10956675All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales716Open in IMG/M
3300007076|Ga0075435_102035934All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales504Open in IMG/M
3300007255|Ga0099791_10127160All Organisms → cellular organisms → Bacteria → Proteobacteria1183Open in IMG/M
3300007788|Ga0099795_10097845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1147Open in IMG/M
3300009088|Ga0099830_10308045All Organisms → cellular organisms → Bacteria → Proteobacteria1265Open in IMG/M
3300009137|Ga0066709_100069596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4124Open in IMG/M
3300009148|Ga0105243_10291555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii1474Open in IMG/M
3300009524|Ga0116225_1012864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4491Open in IMG/M
3300009551|Ga0105238_10597456All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1111Open in IMG/M
3300009824|Ga0116219_10296092All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300010044|Ga0126310_10125592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1597Open in IMG/M
3300010321|Ga0134067_10175131All Organisms → cellular organisms → Bacteria → Proteobacteria777Open in IMG/M
3300010364|Ga0134066_10045392Not Available1107Open in IMG/M
3300010364|Ga0134066_10412196Not Available518Open in IMG/M
3300010379|Ga0136449_100043793All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD006910290Open in IMG/M
3300010403|Ga0134123_11893420Not Available652Open in IMG/M
3300010860|Ga0126351_1075786Not Available509Open in IMG/M
3300011264|Ga0151623_1301005All Organisms → cellular organisms → Bacteria → Proteobacteria769Open in IMG/M
3300011269|Ga0137392_10305319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1316Open in IMG/M
3300011269|Ga0137392_10792253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium783Open in IMG/M
3300012074|Ga0154001_1068365Not Available540Open in IMG/M
3300012096|Ga0137389_10363198All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1233Open in IMG/M
3300012189|Ga0137388_10890644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium823Open in IMG/M
3300012189|Ga0137388_11159335All Organisms → cellular organisms → Bacteria → Proteobacteria710Open in IMG/M
3300012200|Ga0137382_10194350Not Available1392Open in IMG/M
3300012285|Ga0137370_10537160Not Available718Open in IMG/M
3300012361|Ga0137360_10423488All Organisms → cellular organisms → Bacteria → Proteobacteria1125Open in IMG/M
3300012582|Ga0137358_10296494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1098Open in IMG/M
3300012683|Ga0137398_10320388All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1045Open in IMG/M
3300012683|Ga0137398_11028082Not Available570Open in IMG/M
3300012891|Ga0157305_10218198Not Available557Open in IMG/M
3300012893|Ga0157284_10137220Not Available681Open in IMG/M
3300012917|Ga0137395_10604917Not Available792Open in IMG/M
3300012918|Ga0137396_10206630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1444Open in IMG/M
3300012922|Ga0137394_10676844All Organisms → cellular organisms → Bacteria → Proteobacteria869Open in IMG/M
3300012929|Ga0137404_10567075All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300012931|Ga0153915_12229015Not Available641Open in IMG/M
3300012964|Ga0153916_10501029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1285Open in IMG/M
3300013105|Ga0157369_10927160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales893Open in IMG/M
3300013296|Ga0157374_11740038Not Available648Open in IMG/M
3300014150|Ga0134081_10059003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1157Open in IMG/M
3300014497|Ga0182008_10666792Not Available591Open in IMG/M
3300014745|Ga0157377_10931506Not Available652Open in IMG/M
3300015200|Ga0173480_10624815Not Available665Open in IMG/M
3300015201|Ga0173478_10620456Not Available565Open in IMG/M
3300017937|Ga0187809_10348127Not Available555Open in IMG/M
3300017970|Ga0187783_10994074Not Available604Open in IMG/M
3300018028|Ga0184608_10201404Not Available872Open in IMG/M
3300019786|Ga0182025_1157904All Organisms → cellular organisms → Bacteria2424Open in IMG/M
3300019787|Ga0182031_1141412Not Available575Open in IMG/M
3300019883|Ga0193725_1096625Not Available703Open in IMG/M
3300020008|Ga0193757_1027677Not Available562Open in IMG/M
3300020012|Ga0193732_1036255All Organisms → cellular organisms → Bacteria → Proteobacteria849Open in IMG/M
3300020140|Ga0179590_1141391Not Available656Open in IMG/M
3300021078|Ga0210381_10309829Not Available571Open in IMG/M
3300021080|Ga0210382_10320654Not Available683Open in IMG/M
3300021181|Ga0210388_10708665All Organisms → cellular organisms → Bacteria → Proteobacteria876Open in IMG/M
3300021559|Ga0210409_10724425All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300022756|Ga0222622_10488047All Organisms → cellular organisms → Bacteria → Proteobacteria879Open in IMG/M
3300022878|Ga0247761_1134229Not Available519Open in IMG/M
3300022896|Ga0247781_1101246Not Available534Open in IMG/M
3300023071|Ga0247752_1065874Not Available587Open in IMG/M
3300023264|Ga0247772_1070807Not Available739Open in IMG/M
3300023268|Ga0247765_1056816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli811Open in IMG/M
3300025888|Ga0209540_10467226Not Available671Open in IMG/M
3300025912|Ga0207707_11132634Not Available636Open in IMG/M
3300026306|Ga0209468_1192391Not Available516Open in IMG/M
3300026333|Ga0209158_1192799All Organisms → cellular organisms → Bacteria → Proteobacteria718Open in IMG/M
3300026354|Ga0257180_1063622Not Available533Open in IMG/M
3300026499|Ga0257181_1034579All Organisms → cellular organisms → Bacteria → Proteobacteria804Open in IMG/M
3300026530|Ga0209807_1306930Not Available538Open in IMG/M
3300027042|Ga0207766_1037648Not Available542Open in IMG/M
3300027530|Ga0209216_1064182All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300027537|Ga0209419_1060142Not Available742Open in IMG/M
3300027655|Ga0209388_1047169All Organisms → cellular organisms → Bacteria → Proteobacteria1244Open in IMG/M
3300027655|Ga0209388_1215886Not Available528Open in IMG/M
3300027900|Ga0209253_11166768Not Available519Open in IMG/M
3300028673|Ga0257175_1121491Not Available520Open in IMG/M
3300028794|Ga0307515_10694555All Organisms → cellular organisms → Bacteria → Proteobacteria633Open in IMG/M
3300028868|Ga0302163_10203594Not Available548Open in IMG/M
3300030764|Ga0265720_1027544Not Available501Open in IMG/M
3300031170|Ga0307498_10369823Not Available556Open in IMG/M
3300031456|Ga0307513_10807609Not Available644Open in IMG/M
3300031740|Ga0307468_101503215Not Available624Open in IMG/M
3300031780|Ga0318508_1215299Not Available551Open in IMG/M
3300032017|Ga0310899_10409238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales652Open in IMG/M
3300032397|Ga0315287_10920471All Organisms → cellular organisms → Bacteria → Proteobacteria1022Open in IMG/M
3300033483|Ga0316629_11661432Not Available524Open in IMG/M
3300033521|Ga0316616_103507519Not Available591Open in IMG/M
3300034384|Ga0372946_0389900Not Available676Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.49%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.60%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.77%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.77%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter3.77%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.77%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.83%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.89%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.89%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.89%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.89%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.94%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.94%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.94%
SedimentEnvironmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage → Sediment0.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.94%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.94%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.94%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.94%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.94%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.94%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens0.94%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908009Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2EnvironmentalOpen in IMG/M
3300000897Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3EnvironmentalOpen in IMG/M
3300001182Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2EnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001664Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembledEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300002906Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cmEnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011264Acid mine drainage microbial communities from Malanjkhand copper mine, India - M16 k-mer 63EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012074Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ085 MetaGHost-AssociatedOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020008Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022878Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L111-311C-4EnvironmentalOpen in IMG/M
3300022896Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L184-509B-5EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300023264Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L151-409C-6EnvironmentalOpen in IMG/M
3300023268Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6EnvironmentalOpen in IMG/M
3300025888Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026354Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-BEnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027042Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)EnvironmentalOpen in IMG/M
3300027530Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300028868Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3EnvironmentalOpen in IMG/M
3300030764Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FWIRA_021221902124908009SoilQNGTVLEGCLLAILLDAGGAQSGKAMLIDRKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC
JGI12167J12862_10190513300000897Forest SoilMPFGSGERLLTILLDAGGAQSGKAVLIDGKLPGEEFVDGQRXTAASLLEGEQAAADCGNDFGLTANYP
JGI12668J13544_101073813300001182Forest SoilSERRLLAVLLDPRGAQPRKAMLVDGKLPGQEFVDGQRVAAASLLKGEQAAADRRNDFGLATDDPSLGSGCGQIRNR*
A10PFW1_1239541233300001538PermafrostSWSNAAGSGERLLAILLDTGGAQSGQAMLIDGKLPGQEFVDGQRVPAAGLLKGEQAAADSGNDFGLTANNPPFGPGRGQIRNC*
P5cmW16_105643513300001664PermafrostMRLVGAGLLAILLDSGGAQSGKAVLIDGKLPGQEFIDGQGVAAAGLLEGEQAAATAARLRPYGEYPPFGAGRGQIRNC*
C688J35102_11907826423300002568SoilMKPIFVKCRRSGPLLAILLDPGGAQSRKPMLIDGKLPGEEFVDRQGVTAASLLEGEQATANRGNDFGFTANNPPFGSGCWQIRNR*
JGI25614J43888_1020679423300002906Grasslands SoilVLEGCLLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQIRNC*
Ga0066684_1101259923300005179SoilLAILLDAGGAQSGKAMLIDGKLPGEELVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC*
Ga0070660_10104785213300005339Corn RhizosphereMPMVRESLLAILLDTGGPQAGQAMLIDGKLPGQEFVDRQGITAACLLKGEQTAADRGNDLCLAADHPP
Ga0070661_10032503113300005344Corn RhizosphereMLLVLKLVLLAILLDTGGAQSRQAMLIDRKLPGKEFVDSQRVTTAGFFEGKQAATDCGNDFGLAA
Ga0070663_10191623013300005455Corn RhizosphereLLPVLLDAGGPQACQAVLIDGELPRQELVHRQRVAAASLLEGEQTAANRGDDFGLAADHPPFGSGRGQIRNC*
Ga0070699_10068744423300005518Corn, Switchgrass And Miscanthus RhizosphereMKPIFIKIVRVLEGCLLAILLDAGGAQSGKAMLIDGKLPGKEFVDRQRVAAASLLEGEQATAHSGNDFGLPADDPPFGPGRRQIRNC*
Ga0070664_10078547613300005564Corn RhizosphereMPQVLTGSWPDLGLILAGLLPVLLDTRGAQPGKAMLIDGKLPGEKFVDRQRVAAASLLEGEQTAANRGNDFGLTANNPPFGPGRGQIRNR*
Ga0066654_1035524713300005587SoilMPSVLKRALLPILLDAGGAQSRQAMLIDRKLPGEEFVDRQGVPAAGLLEGKQAATYRGNDFGLTANDPPFGAGRGQIRNR*
Ga0068870_1138660113300005840Miscanthus RhizosphereMPMVRESLLAILLDTGGPQAGQAMLIDGKLPRQEFVDRQRVTAACFLKGEQAAAHRGNDFCLAADHPTFGSGRGQVSNC*
Ga0066652_10132012113300006046SoilMSPLLRSLLAILLDAGGAQSRQPMLIDGKLPGEEFVDSQGVTAAGLLEGEQAAADCGNDFGFTANDPPFGSGRGKIRNR*
Ga0066659_1095667523300006797SoilLAILLDAGGAQSRQPMLIDGKLPGEEFVDSQGVTAAGLLEGEQAAADCGNDFGFTANDPPFGSGRGKIRNR*
Ga0075435_10203593413300007076Populus RhizosphereMPVRERSLLAILLDPGGPQPRKSVLVDGKLPGKEFVDRQGVAAASFLEGEQATANRGDDFGLTADDPP
Ga0099791_1012716013300007255Vadose Zone SoilMPSIPEARLLAILLDTGGAQSRKTVLVDGKLPGKEFVDGQCVAAASLLEGEQAAANCGNDFGFTADNPPFGPGCWQIRNC*
Ga0099795_1009784523300007788Vadose Zone SoilRVLEGCLLPVLLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQIRNC*
Ga0099830_1030804523300009088Vadose Zone SoilMPELQEGRLLAILLDAGGAQSGKAMLIDGKLPGKELVDGQRVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQVRNC*
Ga0066709_10006959613300009137Grasslands SoilALLAILLDAGGAQSGKAMLIDGKLPGEEFVDGQGVTAASLLEGEQAAADRGNDFGLPADNPTFGPGRGQIRNC*
Ga0105243_1029155513300009148Miscanthus RhizosphereRESLLPILLDPGGPKARQTVLIDGKLPGQEFVDGQRITAAGFLEGKQAAADRCNDFGLAADNPPFGAGRGQIGNC*
Ga0116225_101286443300009524Peatlands SoilMLKTEKIGFAGQGRFSSNAIDLAGGRLLAVLLDPGGAQPSEAVLVDGKLPGQEFINSQRITAAGFLEGEQTAANRGNDLGLATDDPPLGAGCGQIRNR*
Ga0105238_1059745623300009551Corn RhizosphereMLLVLKLVLRAILLDTGGAQSHQAMLIDRKLPGKEFVDSQRVTTAGFFEGKQAATDCGNDFGLAANDPSFGAGRGQIGNG*
Ga0116219_1029609213300009824Peatlands SoilMLKTEKIGFAGQGRFSSNAIGLAGGRLLAVLLDPGGAQPSKAVLVDGKLPGQEFINSQRITAAGFLEGEQTAANRGNDLGLATD
Ga0126310_1012559223300010044Serpentine SoilMPPLLRRLLAILLDTGGAQSRQSMLIDGKLPGEEFVDGQGVTAAGLLKGEQAASDCGDDFGFTANDPPFGSGRGQIRNR*
Ga0134067_1017513113300010321Grasslands SoilMPALLRRLLAILLDAGGAQSRQPMLIDGKLPGEEFVDSQGVTAAGLLKGEQAAADCGNDYRFTANDPPFGSGRGQIRN
Ga0134066_1004539223300010364Grasslands SoilMPALLRRLLAILLDAGGAQSRQPMLIDGKLPGEEFVDSQGVTAAGLFKGEQTAADCGNDFGFTANNPPLGSGRGQIRNR*
Ga0134066_1041219613300010364Grasslands SoilKPTFIKIECVLEGCLLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLFKREQAAAHSGNDFGLPAEYPPFGPGRGQIRNC*
Ga0136449_10004379363300010379Peatlands SoilMLKTEKIGFAGQGRFSSNAIGLAGGRLLAVLLDPGGAQPSKAVLVDGKLPGQEFINSQRITAAGFLEGEQTAANRGNDLGLATDDPPLGAGCGQIRNR*
Ga0134123_1189342023300010403Terrestrial SoilMVRVLEGCLLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVTAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC*
Ga0126351_107578613300010860Boreal Forest SoilQRKFDFYQNPVGSGERLLAILLDAGGAQSGKAMLVDGKLPGEEFVDRQRVAAASLLEGEQAAADRGNDFGLTANYPPFGPGRGQIRNR*
Ga0151623_130100513300011264SedimentAAQRTADFQKICDFRTSLLAVLLNAGGPQAGQTVLVDRELPGKEFIDRQRVPAAGLFKGEQAAADSGNDLSLAADDPPFGSGRGQIRNC*
Ga0137392_1030531933300011269Vadose Zone SoilLLAILLDAGGAQSGKAMLIDGKLPGKELVDGQRVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQIRNC*
Ga0137392_1079225323300011269Vadose Zone SoilLLAILLDAGGAQSGKAMLIDGKLPGKELVDGQRVAAASLLKGEQAATDRGNDFGLTANYPPFGPGRGQIRNC*
Ga0154001_106836513300012074Attine Ant Fungus GardensMRLVLARLLAILLDTRGAQPRKAMLIDGKLPGEEFVDGQRVTAASLLKGEQAAADCGNNFGLTADNPPF
Ga0137389_1036319813300012096Vadose Zone SoilLLAILLDAGGAQSGKAMLIDGKLPGKELVDGQRVAAASLLKGEQAAANRGNDFGLTANYPPFGPGRGQIRNC*
Ga0137388_1089064423300012189Vadose Zone SoilLLAILLDAGGAQSGKAMLIDGKLPGKELVDGQRVAAASLLKGEQAAANRGNDFGLTADYPPFGPGRGQIRNC*
Ga0137388_1115933513300012189Vadose Zone SoilMPSIPEARLLAILLDTGGAQSRKTVLVDGKLPGKEFVDGQCVAAASLLEGEQAAANCGNDFGFTADNPPFG
Ga0137382_1019435013300012200Vadose Zone SoilAAGLGKSLLAIVLDAGGAQSRKAVLIDGKLPGKEFVDGQRVAAASLLKGEQAAADRGNDFGLTANYPPFGAGRGQIRNC*
Ga0137370_1053716013300012285Vadose Zone SoilMPALLRRLLAILLDAGGAQSRQPMLIDGKLPGEEFVDSQGVTAAGLFKGEQTAADCGNDFGFTANNPPFGSGRGQIRNR*
Ga0137360_1042348813300012361Vadose Zone SoilKAVLVDGKLPGKEFVNGQCVAAASLLEGEQATANCGNDFGFTADNPPFGPGCRQIRNC*
Ga0137358_1029649413300012582Vadose Zone SoilLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAASHSGNDFGLPADDPPFGPGRGQIRNC*
Ga0137398_1032038813300012683Vadose Zone SoilTARPIFVKSRRSGERLLAILLDAGGAQSGKAMLIDGKLPGKELVDGQRVAAASLLEGEQAAADRGNDFGLTANYPPFGPGRGQIRNC*
Ga0137398_1102808213300012683Vadose Zone SoilNPAGSGEPLLAILLDTGGAQSRQAMLIDRKLPGKEFVDRQGVAAAGLLKGEQATSHRGNDFGFTANDPPFGPGRGQIRNR*
Ga0157305_1021819813300012891SoilMPQVLTGSWPDLGLILAGLLPVLLNTRGAQPGKAMLIDGKLPGEKFVDRQRVAAASLLEGEQTAANRGNDFGLTANDPPFGPGRGQIRDR*
Ga0157284_1013722023300012893SoilMPQVLTGSWPDLGLILAGLLPVLLDTRGAQPGKAMLIDGKLPGEKFVDRQRVAAASLLEGEQTAANRGNDFGLTADNPPFGPGRGQIRNC*
Ga0137395_1060491713300012917Vadose Zone SoilSRFLSNAVDSRARLLAILLDAGGAQSGKAVLVDGKLPGKEFVDGQRVTAAGLLKREQAAAHSGNDFGLTANYPPFGSGCG*
Ga0137396_1020663013300012918Vadose Zone SoilGGAQSRKAVLVNGELPGQEFVDGQRVTAASLLKGEQAAADRGNDFGLTADNPPFGPGCGQIRNC*
Ga0137394_1067684423300012922Vadose Zone SoilMPSIPEARLLAILLDTGGAQSRKTVLVDGKLPGKEFVDGQRVAAASLLEGEQAAANCGNDFGFAADNPPFGPGRGQIRNC*
Ga0137404_1056707523300012929Vadose Zone SoilMPSIPEGRLLAILLDTGGAQSRKTVLVDGKLPGKEFVDGQRVAAASLLEGEQAAANCGNDFGFTADNPPFGPGCWQIRNC*
Ga0153915_1222901523300012931Freshwater WetlandsMPFVQEQRLLAVLLDPGGAQPRKAVLIDGKLPGQEFVDGERVTAAGLLKGEQAAANRGNDFGLATDDPPLGSGCWQIRNC*
Ga0153916_1050102913300012964Freshwater WetlandsMPSIPEAALLAILLDAGSAQSGKAVLIDGKLPGKELVDGQRITAASLLEGEQTAADRGNDFGLTANNPPFGARRGQVRDC*
Ga0157369_1092716013300013105Corn RhizosphereFRTSLLAVLLNTGGSQSGQTVLVDRELPGKEFIDRQRVPAAGLFKGEQAAADSGNDLSLAADNPPFGSGRGQIRNC*
Ga0157374_1174003823300013296Miscanthus RhizosphereMPSVLAGRLLAILLDAGGAQSCKAMLIDGKLPGKELVDGQRVAAASLLKGEQAAADRGNDFGLTANYPPFGPGRGQIRNC*
Ga0134081_1005900313300014150Grasslands SoilKPTFIKIECVLEGCLLAILLDAGGAQSGKAMLIDGKLPGEEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC*
Ga0182008_1066679213300014497RhizosphereMLLVLKLVLLAILLDTGGAQSRQAMLIDRKLPGKEFVDSQRVTTAGFFEGKQAATDCGNDFGLAANDPSFGAGRGQIGNG*
Ga0157377_1093150613300014745Miscanthus RhizosphereMPQVLTGSWPDLGLILAGLLPVLLDTRGAQPGKAMLIDGKLPGKEFVDRQRVAAASLLKGEQAAANRGNDFGLTADDPPFGPGRGQIRNC*
Ga0173480_1062481513300015200SoilLRKTKPVFIKSSGLKSLLPVLLDAGGPQACKAVLIDGELPRQEFVHRQRVAAASLLEGEQAAANRSNDFGLAADHPPFGSGRGQVRNC*
Ga0173478_1062045613300015201SoilSWPDLGLILAGLLPVLLDTRGAQPGKAMLIDGKLPGEKFVDRQRVAAASLLEGEQTAANRGNDFGLTANNPPFGPGRGQIRNR*
Ga0187809_1034812713300017937Freshwater SedimentLLDAGGTQSGKAVLIDGKLPGKEFVDGQRVTAASFLEGEQAAAHRGNDFGFTANDPPFGPGRG
Ga0187783_1099407413300017970Tropical PeatlandMIILRRLLAILLNSGGSKPRKAVLIDGELPGEEFVDGQRVAAASFLKGQQAAAHCGNDFGLATDDPSLRTGCGQI
Ga0184608_1020140413300018028Groundwater SedimentLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQIRNC
Ga0182025_115790433300019786PermafrostMPMVSGERLLAILLDAGGAQPGKAMLIDGKLPGQEFVDRQRVAAAGLLKGEQAAADSGNDFGLTANNPPFGPGCGQIRNC
Ga0182031_114141223300019787BogFSSNATDCGDRLLAILLDAGGAQSGKAMLVDGKLPGQEFVDRQGIAAAGLLEGEQAAADRGNDFGLAADNPPFGPGCGQIRDG
Ga0193725_109662523300019883SoilLAILLDAGGAQSGKAMLIDGKLPGKEFVDGERVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQIRNC
Ga0193757_102767713300020008SoilSRFLSNAVDSRARLLAILLDAGGAQSGKAVLVDGKLPGKEFVNGQCVAAASLLEGEQAAANCGNDFGFTADNPPFGPGCRQIRNC
Ga0193732_103625513300020012SoilLAILLDAGGAQPRKAVLVDGKLPGKEFVNGQCVAAASLLEGEQAAADCGNDFGFTADNPPFGPGCRQIRNC
Ga0179590_114139113300020140Vadose Zone SoilLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC
Ga0210381_1030982913300021078Groundwater SedimentEPIFIKIGWVLEGRLLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADNPPFGPGRGQIRNC
Ga0210382_1032065413300021080Groundwater SedimentMSLVLKGALLAILLDAGGAQSGKAMLIDGKLPGEEFVDGQGVTAASLLEGEQAAADRGNDFGLPADNPTFGPGRGQIRNC
Ga0210388_1070866513300021181SoilLSILLDAGGAQTGKTVLIDGKLPGQEFIDRQGVAAAGLLKGEQTTTDGGNNFGLTANNPPFGSGCRQIRDR
Ga0210409_1072442523300021559SoilMFKTEKIGFAEQGRFSSNAIGSAGGRLLAVLLDPGGAQPGKTVLVDGKLPGQELVNGQRITAASFLEGEQTAANRGNDLGLA
Ga0222622_1048804713300022756Groundwater SedimentMPQVLTGSWPDLGLILAGLLPVLLDTRGAQPGKAMLIDGKLPGEKFVDRQRVAAASLLEGEQTAANRGNDFGLTANNPPFGPGRGQIRNR
Ga0247761_113422923300022878Plant LitterLARPIFVKSRRFPDRLLAILLDAGGAKTRQTVLVDGKLPGKEFVNRQGVTAAGLLEGEKSATHSGDDFGLAA
Ga0247781_110124613300022896Plant LitterMPQVLTGSWPDLGLILAGLLPVLLDTRGAQPGKAMLIDGKLPGEKFVDRQRVAAASLLEGEQTAANRGNDFGLTANDPPFGPGRGQIRDR
Ga0247752_106587423300023071SoilAAQNEADFRQIARFGERLLPVLLDTGGAQPGKAMLVDGKLPGQEFVHRQRVAAASLLEGEQAAANRGNDFGLAADHPPFGPGRGQIRNC
Ga0247772_107080713300023264Plant LitterMPLVLTRSWPDLGLILAGLLPVLLDTRGAQPGKAMLIDGKLPGEKFVDRQRVAAASLLEGEQTAANRGNDFGLTANNPPFGPGRGQIRNR
Ga0247765_105681613300023268Plant LitterMPLVRESLLAILLDTGGPQAGQAMLIDGKLPGQEFVYRQRVTAACLLEGEQAAAHRGNDFCLAADYPTFGSGRGQVSNC
Ga0209540_1046722623300025888Arctic Peat SoilNAKGFGEGLLAILLDAGGAQSGKAVLIDGKLPGKEFVDGQRVTAAGLLEGEQAAAHRGNDFGFTANNPPFCPGRGQVRNC
Ga0207707_1113263413300025912Corn RhizosphereMLLVLKLVLLAILLDTGGAQSRQAMLIDRKLPGKEFVDSQRVTTAGFFEGKQAATDCGNDFGLAANDPSFGAGRGQIGNG
Ga0209468_119239123300026306SoilLAILLDAGGAQSGKAMLIDGKLPGEELVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPP
Ga0209158_119279913300026333SoilLAILLDAGGAQSGKAMLIDGKLPGEELVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC
Ga0257180_106362223300026354SoilVDSRARLLAILLDAGGAQSRKAVLVDGKLPGKEFVNGQCVAAASLLEGEQATANCGNDLGFTADNPPFGPGCRQIRNC
Ga0257181_103457913300026499SoilMPSIPEARLLAILLDTGGAQSRKTVLVDGKLPGKEFVDGQRVAAASLLEGEQAAANCGNDFGFTADNPPFGPGCRQIRNC
Ga0209807_130693013300026530SoilKIVWVLEGCLLAILLDAGGAQSGKAMLIDGKLPGEELVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC
Ga0207766_103764823300027042Tropical Forest SoilLAILLDAGGAQTCEAVLIDRELPGEEFIDRQRITAAGFLEREQSAADRGNDFSLTANDPPFGPGRGQVRNRKRAAVRPD
Ga0209216_106418223300027530Forest SoilLPILLDTGGTQPGKAMLIDGKLPGKKFVDRQGVAAAGFLEGEQATANRGNDFGLTADDPP
Ga0209419_106014223300027537Forest SoilLAILLDTGGAQSGKAMLIDGKLPGKEFIDGQRVAAASLLEGEQTAAHSGNHFGLAADNPPFGPGRGQIRNC
Ga0209388_104716923300027655Vadose Zone SoilMPSIPEARLLAILLDTGGAQSRKTVLVDGKLPGKEFVDGQCVAAASLLEGEQAAANCGNDFGFTADNPPFGPGCWQIRNC
Ga0209388_121588613300027655Vadose Zone SoilLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLFKREQAAAHSGNDFGLPADYPPFGPGRGQIRNC
Ga0209253_1116676813300027900Freshwater Lake SedimentMPRVSGALLPVLLDPGGAQPGKAMLIDGKLPGKELVDRQRVAAASLLEGEQAAANRGNDFGLAADNPPFGPGRGQIRNC
Ga0257175_112149113300028673SoilLSKTIVSGYGLLPILLDSGGAQAGKAVLVDGKLPREEFVDRQRVAAAGLLKGEQAAANRGNDFGFTANNPPFGSGRGQIRNC
Ga0307515_1069455523300028794EctomycorrhizaMPSIPEARLLAILLDAGGAQSRQTVLVDGKLPGKEFVDGQRVAAASLLEGEQAAANCGNDLGFTADNPPF
Ga0302163_1020359413300028868FenLRKAKPIFVKCSRFRSDLLAVLLDAGGAQSGQAMLIDGKLPGKEFVDRQRVAAASLLEGEQAAADRGNDFGLTADNPPFGPGCGQIRNC
Ga0265720_102754413300030764SoilMIAFVPIQSERKGALVSGRLLAVLLDAGGAQSRQAMLIDGKLPGQEFVDGQRVAAAGLLKGEQAAADRGNDFGITADYPPFGPGRGQVRYC
Ga0307498_1036982323300031170SoilVWVLEGCLLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAAAHSGNDFGLPADDPPFGPGRGQIRNC
Ga0307513_1080760913300031456EctomycorrhizaMAKPIFVKCVGSCRRLLPILLDAGGAQPGKAMLVDGKLPGQEFVDRQRVAAASLLEGEQAAANRGNDFGLTANNPPFGSGRG
Ga0307468_10150321513300031740Hardwood Forest SoilLAILLDAGGAQSGKAMLIDGKLPGKEFVDGQRVAAASLLEGEQAASHSGNDFGLPADDPPFGPGRGQIRNC
Ga0318508_121529923300031780SoilLAILLDAGGAQTGEAMLIDRELPGEEFIDRQRITAAGFLEREQSAADRGNDFSLTANDPPFGPGRRQVR
Ga0310899_1040923813300032017SoilMPMVRESLLAILLDTGGPQAGQAMLIDGKLPGQEFVDRQRVTAACFLEGEQATADRGNDFRLAADHPTFGSGRGQVCN
Ga0315287_1092047123300032397SedimentMPIFVKCRWSREALLPVLLDTGGAQPGKAMLIDGKLPGKEFVDRQRVAAASFLEGEQAAANRGNDFGLTADNPPFGPGRGQIRNC
Ga0316629_1166143223300033483SoilMPRVSGALLPVLLDPGGAQPGKAMLIDGKLPGKELVDRQRVAAASLLEGEQAAANRGNDFGLTADDPPF
Ga0316616_10350751913300033521SoilMPRVSGALLPVLLDPGGAQPGKAMLIDGKLPGKEFVDRQRVAAASLLEGEQAAANRGNDFGLTANNPPFGPGRGQIRNC
Ga0372946_0389900_3_2093300034384SoilLLDAGGAQSRKAMLIDGKLPGKELVDGQRVAAASLLKGEQAAADRGNDFGLTANYPPFGPGRGQIRNC


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.