Metagenome / Metatranscriptome Family F093467

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093467
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	139 residues
Representative Sequence	VTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYSSPIVMGLVVWILFVFAMRALEPYMSTARRRLPA
Number of Associated Samples	87
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.75 %
% of genes near scaffold ends (potentially truncated)	51.89 %
% of genes from short scaffolds (< 2000 bps)	82.08 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.396 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.755 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.943 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.77% β-sheet: 6.94% Coil/Unstructured: 50.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF03176	MMPL	5.66
PF01493	GXGXG	4.72
PF00067	p450	3.77
PF13620	CarboxypepD_reg	2.83
PF01645	Glu_synthase	2.83
PF01850	PIN	2.83
PF08281	Sigma70_r4_2	1.89
PF04898	Glu_syn_central	1.89
PF01882	DUF58	0.94
PF01370	Epimerase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	5.66
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	5.66
COG2124	Cytochrome P450	Defense mechanisms [V]	3.77
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	2.83
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	2.83
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.94

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.87 %
Unclassified	root	N/A	6.60 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	58.49 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.60 %
Unclassified	root	N/A	6.60 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	55.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.60 %
Unclassified	root	N/A	6.60 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	55.66 %
Unclassified	root	N/A	6.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.83 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.89 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	55.66 %
Unclassified	root	N/A	6.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.83 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	55.66 %
Unclassified	root	N/A	6.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.83 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	0.94 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	55.66 %
Unclassified	root	N/A	6.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.83 %
Frankia elaeagni	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	1.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.89 %
Pusillimonas sp. T7-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. T7-7	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004156\|Ga0062589_100323531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1207	Open in IMG/M
3300004157\|Ga0062590_100632266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	948	Open in IMG/M
3300004643\|Ga0062591_100088762	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300004643\|Ga0062591_100137811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1673	Open in IMG/M
3300004643\|Ga0062591_100380527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1156	Open in IMG/M
3300005293\|Ga0065715_10293566	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005294\|Ga0065705_10126531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2649	Open in IMG/M
3300005294\|Ga0065705_10154544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1889	Open in IMG/M
3300005295\|Ga0065707_10141548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1765	Open in IMG/M
3300005330\|Ga0070690_100844829	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300005330\|Ga0070690_101634963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300005336\|Ga0070680_100173410	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300005341\|Ga0070691_10759022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	587	Open in IMG/M
3300005343\|Ga0070687_100023647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2922	Open in IMG/M
3300005345\|Ga0070692_10244619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1071	Open in IMG/M
3300005345\|Ga0070692_10605428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300005364\|Ga0070673_100858804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	840	Open in IMG/M
3300005406\|Ga0070703_10055430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1280	Open in IMG/M
3300005406\|Ga0070703_10324749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. T7-7	649	Open in IMG/M
3300005438\|Ga0070701_10917596	Not Available	606	Open in IMG/M
3300005440\|Ga0070705_100129709	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005441\|Ga0070700_101008811	Not Available	685	Open in IMG/M
3300005445\|Ga0070708_100365143	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300005458\|Ga0070681_10173654	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300005467\|Ga0070706_100087660	All Organisms → cellular organisms → Bacteria	2885	Open in IMG/M
3300005468\|Ga0070707_101799555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia elaeagni	580	Open in IMG/M
3300005471\|Ga0070698_100175501	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300005545\|Ga0070695_100018647	All Organisms → cellular organisms → Bacteria	4214	Open in IMG/M
3300005545\|Ga0070695_100546155	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005546\|Ga0070696_100171003	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300005617\|Ga0068859_102927019	Not Available	523	Open in IMG/M
3300005843\|Ga0068860_101434613	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300006049\|Ga0075417_10574613	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300006844\|Ga0075428_100124201	All Organisms → cellular organisms → Bacteria	2809	Open in IMG/M
3300006847\|Ga0075431_102132962	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006894\|Ga0079215_10019963	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300006918\|Ga0079216_10950426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	656	Open in IMG/M
3300006969\|Ga0075419_10510396	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300007004\|Ga0079218_10101678	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300007004\|Ga0079218_10108283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1929	Open in IMG/M
3300007004\|Ga0079218_10579577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1018	Open in IMG/M
3300009093\|Ga0105240_12774740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300009147\|Ga0114129_10399237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1812	Open in IMG/M
3300009148\|Ga0105243_12568759	Not Available	549	Open in IMG/M
3300009156\|Ga0111538_11623795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	815	Open in IMG/M
3300009176\|Ga0105242_10823939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	921	Open in IMG/M
3300009553\|Ga0105249_12955759	Not Available	546	Open in IMG/M
3300009837\|Ga0105058_1054578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	898	Open in IMG/M
3300010373\|Ga0134128_11530012	All Organisms → cellular organisms → Bacteria → Terrabacteria group	734	Open in IMG/M
3300012203\|Ga0137399_10781118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300012204\|Ga0137374_10014862	All Organisms → cellular organisms → Bacteria	8999	Open in IMG/M
3300012355\|Ga0137369_10219823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1456	Open in IMG/M
3300012360\|Ga0137375_10049587	All Organisms → cellular organisms → Bacteria	4597	Open in IMG/M
3300012907\|Ga0157283_10328921	Not Available	542	Open in IMG/M
3300012918\|Ga0137396_10257026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1289	Open in IMG/M
3300015371\|Ga0132258_10091062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7152	Open in IMG/M
3300018000\|Ga0184604_10113047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	856	Open in IMG/M
3300018027\|Ga0184605_10333860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	685	Open in IMG/M
3300018028\|Ga0184608_10006840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3744	Open in IMG/M
3300018028\|Ga0184608_10138420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1043	Open in IMG/M
3300018031\|Ga0184634_10023261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2379	Open in IMG/M
3300018056\|Ga0184623_10004635	All Organisms → cellular organisms → Bacteria	5866	Open in IMG/M
3300018061\|Ga0184619_10251395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	813	Open in IMG/M
3300018071\|Ga0184618_10144818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	967	Open in IMG/M
3300018074\|Ga0184640_10098352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1271	Open in IMG/M
3300018075\|Ga0184632_10098229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1282	Open in IMG/M
3300018076\|Ga0184609_10092041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1353	Open in IMG/M
3300020003\|Ga0193739_1044501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1146	Open in IMG/M
3300021080\|Ga0210382_10050861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1630	Open in IMG/M
3300021080\|Ga0210382_10283927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300021344\|Ga0193719_10207397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	836	Open in IMG/M
3300022694\|Ga0222623_10086712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1215	Open in IMG/M
3300022756\|Ga0222622_10355668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1022	Open in IMG/M
3300025885\|Ga0207653_10000206	All Organisms → cellular organisms → Bacteria	39710	Open in IMG/M
3300025910\|Ga0207684_10742465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	832	Open in IMG/M
3300025917\|Ga0207660_10064874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2637	Open in IMG/M
3300025918\|Ga0207662_10214035	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1252	Open in IMG/M
3300025934\|Ga0207686_10099922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1935	Open in IMG/M
3300025936\|Ga0207670_10626928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	885	Open in IMG/M
3300026075\|Ga0207708_10087173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2403	Open in IMG/M
3300026118\|Ga0207675_100671288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1043	Open in IMG/M
3300026944\|Ga0207570_1018791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300027873\|Ga0209814_10489367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300027880\|Ga0209481_10681171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300027886\|Ga0209486_10005422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5538	Open in IMG/M
3300027886\|Ga0209486_10405229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	828	Open in IMG/M
3300027909\|Ga0209382_10312160	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1770	Open in IMG/M
3300028719\|Ga0307301_10169188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	706	Open in IMG/M
3300028784\|Ga0307282_10328600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300028791\|Ga0307290_10061427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1360	Open in IMG/M
3300028811\|Ga0307292_10484493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300028814\|Ga0307302_10374511	All Organisms → cellular organisms → Bacteria → Terrabacteria group	703	Open in IMG/M
3300028819\|Ga0307296_10186085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1126	Open in IMG/M
3300028819\|Ga0307296_10422482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
3300028824\|Ga0307310_10530081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300028824\|Ga0307310_10532127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300028828\|Ga0307312_10344719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	974	Open in IMG/M
3300028828\|Ga0307312_10598638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
3300028828\|Ga0307312_10757797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300028828\|Ga0307312_10908355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300028878\|Ga0307278_10173235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300028878\|Ga0307278_10228930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	827	Open in IMG/M
3300028884\|Ga0307308_10181030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1010	Open in IMG/M
3300028884\|Ga0307308_10313277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300030903\|Ga0308206_1110919	Not Available	625	Open in IMG/M
3300031965\|Ga0326597_10010120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	12589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.13%
Host-Associated	Host-Associated	18.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.98%
Plants	Host-Associated → Plants	18.87%
Aquatic	Environmental → Aquatic	14.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.15%
Sediment	Environmental → Aquatic → Sediment	12.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.72%
Freshwater	Environmental → Aquatic → Freshwater	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.51%
Loam	Environmental → Terrestrial → Soil → Loam	24.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.83%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	24.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	12.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.83%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062589_1003235312	3300004156	Soil	MPPGGGGKSGEACQVTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLIVWILFVFAVRALEPYMSTARRR
Ga0062590_1006322662	3300004157	Soil	MPPGGGGKSGEACQVTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWVAIPTLGYAVSYADAYA
Ga0062591_1000887622	3300004643	Soil	VSRRRAIRPIRGAARIFAPIVAVAVIAMILTLSFALLAVRFVGLSTYVVQGAPTESMVPIGSLVLAVPGASAADIALEPADTREAPGGLKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVIAVRAL
Ga0062591_1001378111	3300004643	Soil	MPPRGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTL
Ga0062591_1003805272	3300004643	Soil	MPPGGGGKSGEACQVTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLIVWILFVFAVRALEPYMST
Ga0065715_102935662	3300005293	Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLPA*
Ga0065705_101265312	3300005294	Switchgrass Rhizosphere	VSRRRAIRPIRGAARIFAPIVAVAVIATILTLSFALLAVRFVGLSTYVVQGAPTESMVPIGSLVLVVPGASTADIALEPADTGDAPGGLKIGTAWVAIPTLGYAVSYAEAYSSPIVMGLVVWILFVIVVRALEPYMSTARRRLPA*
Ga0065705_101545442	3300005294	Switchgrass Rhizosphere	MPPGGGGKPGEAYQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYASPIVVGLVVWVLFIFAVRALEPYMSTARRRLTA*
Ga0065707_101415481	3300005295	Switchgrass Rhizosphere	VSRRRAIRPIRGAARIFAPIVAVAVIATILTLSFALLAVRFVGLSTYVVQGAPTESMVPIGSLVLVVPGASTADIALEPADTWDASGGLKIGTAWVAIPTLGYAVSYAEAYSSPIVMGLVVWILFVIVVRALEPYMSTARRRLPA*
Ga0070690_1008448291	3300005330	Switchgrass Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYSSPIVMGLVVWILFVFAMRALEPYMSTA
Ga0070690_1016349631	3300005330	Switchgrass Rhizosphere	GEACQVTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLVVWILFVFVVRALEPYMSTARRRLPA*
Ga0070680_1001734102	3300005336	Corn Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLVVWILFVFAVRALEPYMSTARRRLPA*
Ga0070691_107590221	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETGDDTSAAPKIGTAWVAIPTLGYVVNYAD
Ga0070687_1000236471	3300005343	Switchgrass Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYSSPIVMGLVVWILFVFAMRALEPYMSTARRRLPA*
Ga0070692_102446193	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PSVPIRLWRRSDPRLRVRRVPPGGGGKSGEACQVTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLVVWILFVFVVRALEPYMSTARRRLPA*
Ga0070692_106054281	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLPA*
Ga0070673_1008588041	3300005364	Switchgrass Rhizosphere	MPPGGGGKSGEACQVTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLIVWILFVFAVRALEPYMSTARRRLPA*
Ga0070703_100554302	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVSYVDAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLLA*
Ga0070703_103247492	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETGDDTSAAPKIGTAWVAIPTLGYVVNYADAYSSPIVMGLVVWILFVFAMRALEPYMSTAPRRLPA*
Ga0070701_109175961	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVSYVDAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLLA*
Ga0070705_1001297092	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEAYQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYSSPIVMGLVVWVLFIFAVRALEPYMSTARRRLPA*
Ga0070700_1010088112	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDHTSAAPKIGTAWVAIPTLGY
Ga0070708_1003651432	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGASIAEEPPASGDASAAPQIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVIAVRALEPHMSTARRRLPA*
Ga0070681_101736542	3300005458	Corn Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGY
Ga0070706_1000876601	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVS
Ga0070707_1017995551	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAV
Ga0070698_1001755011	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPKIGTAWVAIPTLGYAVSYAD
Ga0070695_1000186475	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVTYVDAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLLA*
Ga0070695_1005461552	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAVNYADAYSSPIVMGLVVWILFVFAMRALEP
Ga0070696_1001710032	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAVNYADAYSSPIVMGLVVWILFVFAMRALEPYMSTARRRLPA*
Ga0068859_1029270192	3300005617	Switchgrass Rhizosphere	VTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVESDESGDTSAAPKIGTAWVAIPTLGYAVS
Ga0068860_1014346133	3300005843	Switchgrass Rhizosphere	ATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYASPIVVGLVVWVLFIFAVRALEPYMSTARRRLPA*
Ga0075417_105746132	3300006049	Populus Rhizosphere	RWAARKFAPVVALVVTSTVIVLALGLLAVRFVGFNAYVVQGGPAESMVPIGSLVLAVPVTTESVAAIDEKPGVSAPAPKVDTAWVAIPTLGYAVAYAEAYSLPIVMGLVVWFLFVFSLPLVGSRSSTGRRRLPA*
Ga0075428_1001242012	3300006844	Populus Rhizosphere	VTRRMAVRPVRWAARKFAPVVALVVTSTVIVLALGLLAVRFVGFNAYVVQGGPAESMVPIGSLVLAVPVTTESVAAIDEKPGVSAPAPKVDTAWVAIPTLGYAVAYAEAYSLPIVMGLVVWFLFVFSLPLVGSRSSTGRRRLPA*
Ga0075431_1021329622	3300006847	Populus Rhizosphere	ARKFAPVVALVVTSTVIVLALGLLAVRFVGFNAYVVQGGPAESMVPIGSLVLAVPVTTESVAAIDEKPGVSAPAPKVDTAWVAIPTLGYAVAYAEAYSLPIVMGLVVWFLFVFSLPLVGSRSSTGRRRLPA*
Ga0079215_100199634	3300006894	Agricultural Soil	SRVTRQMAVRPVRWAAQKFAPIVALAVTATIIVLALGLLAIRFVGLNAYVVQGGPTESMVPIGSLVLTASQAPTIDTAWVAIPTLGYAVTYAEAYASPIVMGLIVWILFVFALRALEPHTSTARRRLPA*
Ga0079216_109504262	3300006918	Agricultural Soil	MASLLPEAESASSATGGGGNVGEASRVTRQMAVRPVRWAAQKFAPIVALAVTATIIVLALGLLAIRFVGLNAYVVQGGPTESMVPIGSLVLTASQAPTIDTAWVAIPTLGYAVTYAEAYASPIVMGLIVWILFVFALRALEPH
Ga0075419_105103962	3300006969	Populus Rhizosphere	MAVRPVRWAARKFAPVVALVVTSTVIVLALGLLAVRFVGFNAYVVQGGPAESMVPIGSLVLAVPVTTESVAAIDEKPGVSAPAPKVDTAWVAIPTLGYAVAYAEAYSLPIVMGLVVWFLFVFSLPLVGSRSSTGRRRLPA*
Ga0079218_101016781	3300007004	Agricultural Soil	GLVRTESVVRTDSAMASLLPEAESASSATGGGGNVGEASRVTRQMAVRPVRWAAQKFAPIVALAVTATIIVLALGLLAIRFVGLNAYVVQGGPTESMVPIGSLVLTASQAPTIDTAWVAIPTLGYAVTYAEAYASPIVMGLIVWILFVFALRALEPHTSTARRRLPA*
Ga0079218_101082832	3300007004	Agricultural Soil	VTRRMAVRPVRWAARKFAPIVAVAVTATIIVLALGLLAVRFVGLNAYVVQGGPTESMVPIGSLVLTAPTSAPTIDTAWVAIPTLGYAVTYAEAYASPIVMGLVVWILFVFALRALEPHMSIARRRLPA*
Ga0079218_105795772	3300007004	Agricultural Soil	VTRQMAVRPVRWAARKFAPIVALVVTATIIVLALGLLAVRFVGLNAYVVQGGPSESQVPIGSLVLTAPVISNPVAIDEDGGDSSQAPKIGTAWVAIPTLGYAVTYAEAYASPIVMGLVVWILFVFALRALEPHMSTARRRLPA*
Ga0105240_127747401	3300009093	Corn Rhizosphere	VRWAARRLAPVVGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLIVWILFVFAVRALEPYMSTARRRLPA*
Ga0114129_103992373	3300009147	Populus Rhizosphere	MAVRPVRWAAQTIAPIVTLVVTATIIVLALGLLAVRFVGLNAYVVQGGPAESTVPIGSLVLAVPASAQSVIAIESGEAMPAPKVDTAWVAIPTLGYAVTYAEAYASPIVMGLVVWFVFVFSLPLVGSRSSTARRRLPA*
Ga0105243_125687592	3300009148	Miscanthus Rhizosphere	PVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGASIAAEPPASGDASAAPQIGTAWVAIPTLGYAVSYVDAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLLA*
Ga0111538_116237951	3300009156	Populus Rhizosphere	VSRRRAIRPIRGAARVFAPIVAVAVIATILTLSFALLAVRFAGLSTYVVQGGPTESMVPIGSLVLVAPGASAEDIALEPADSGDASGAPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFIFVVRALEPFLSTARRRL
Ga0105242_108239391	3300009176	Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVSYVDAYSSPIVMGLVVWILFVIAVRALEPHMSTARRRLPA*
Ga0105249_129557591	3300009553	Switchgrass Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSPGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYASPIMVGLVV
Ga0105058_10545781	3300009837	Groundwater Sand	MAVRPVRWAARKFAPIVALVVTATIVVLALGLMAVRFVGLNAYVVQGGPAESMVPIGSLVVTTPVLPDAVVAIAEDSGKSSLAPKIGTAWVAIPTLGYAVTYAEMYASPIVMGLVVWILFVFALRALEPHMSTARRRLPA*
Ga0134128_115300121	3300010373	Terrestrial Soil	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSSAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADA
Ga0137399_107811181	3300012203	Vadose Zone Soil	MLAAIVALAVTTAIVALSFGLIAVRFVGLDAYVVQGAPTESMVPIGSLVLVAPVSHGAVAAIDQDDNGDATAAPAIGTAWVAIPTLGYAVTYAQSYSPPIVIGLVVWTFTIIAARALEPYMSTARRRVPA*
Ga0137374_100148625	3300012204	Vadose Zone Soil	VFATIVALAVMATILTLSFALFAVRFVGLSTYVVQGGPAGSMVPIGSLVLVAPVSTAAVVAIKPEDGDDASAAPIVGAAWIAIPTLGYAVTYAEAYSSPIVMGLVVWILFVIVVRALEAHMSTARRRLPA*
Ga0137369_102198233	3300012355	Vadose Zone Soil	VFATIVALAVMATILTLSFALFAVRFVGLSTYVVQGGPAGSMVPIGSLVLVAPVSTAAVVAIKPEDGDDASAAPIVGAAWIAIPTLGYAVTYAEAYSSPIVMGLVVWILFVIAVRALEAHMSTARRRLPA*
Ga0137375_100495872	3300012360	Vadose Zone Soil	VFATIVALAVMATILTLSFALFAVRFVGLSTYVVQGGPAGSMVPIGSLVLVAPVSTAAVAAIKPDESDEASAAPIVGTAWIAIPTLGYAVTYADAYSSPIVMGLVVWIIFVIAVRALEPYMSTARRRRPA*
Ga0157283_103289211	3300012907	Soil	MPPRGGGKPGEAYHVTRRKAVRPVRWAARRLAPIFGLAVIATLVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPSAITVEPDESGDTSAAPKIGTAWV
Ga0137396_102570262	3300012918	Vadose Zone Soil	MLAAIVALAVTTAIVALSLGLIAVRFVGLDAYVVQGAPTESMVPIGSLVLVAPVSQGAVAAIDQDDNGDATAAPTIGTAWVAIPTLGYAVTYAQSYSPPIVIGLVTWILFLITMRALAPHFSSARRRLPA*
Ga0132258_100910623	3300015371	Arabidopsis Rhizosphere	MATILTLSGALMAVRFVGLSTYVVQGGPTESMVPIGSLVLAVPVPSGTAIAAEPALNGDTSAAPAIGTAWVAIPTLGYAVTYAEAYSSPIFMGLVVWILFVLAMRALAPYMSTSRRRLPT
Ga0184604_101130472	3300018000	Groundwater Sediment	VRRVLPDGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMLPIGSLVLVAPVSSGPVVAIEPEVGGDATAAPTIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPSMSTTRRRLPA
Ga0184605_103338601	3300018027	Groundwater Sediment	VSRRRAVRPIRLAARVFAPVVAVAVVATILTLSFALLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGADIALEPADSGDASGAPKIGTAWVAIPTLGYAVSYADAYSSPIM
Ga0184608_100068402	3300018028	Groundwater Sediment	VSRRRAVRPIRGAVRVFASIVAFAVVTTILTLSFGLLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAIEPQQSGDTSAAPTIGTAWVAIPTLGYAVSYADAYSSPIVMGLIVWILFVIAVRALEPYMSTARRRLPA
Ga0184608_101384202	3300018028	Groundwater Sediment	MAVRPVRWAAQTIAPIVALAVTATIIVLALGLLAVRFVGLNAYVVQGGPAESQVPIGSLVLTPVSFEPVVDEVSGDASQAPRIGTAWVAIPTLGYAVTYAEAYSWPIAIGLVTWALFLIAVRALAPYMSTVRRRLPA
Ga0184634_100232611	3300018031	Groundwater Sediment	LSRRMAVRPVRWAAQTLAPIVALAVTATIIVLALGLLAVRFVGLNAYVVQGGPTESMVPIGSLVVTAPVSSDRVVAIDEDSGGSSQAPTIGTAWVAIPTLGYAVSYAEAYSPSIVLGLIVWIFFVFAVRALDPYMSAMR
Ga0184623_100046355	3300018056	Groundwater Sediment	LSRRMAVRPVRWAAQTFAPIVALAVTSTIIVLALGLLAVRFVGLNAYVVQGGPTESMVPIGSLVLTAPVSSASVVAIDEDSGESSQAPKIGTAWVAIPTLGYAVTYAEAYASPIVMGLVVWILFVFAVRALAPHMSTARRRVPA
Ga0184619_102513953	3300018061	Groundwater Sediment	GAARVFAPVVAVAVVATILTLSFALLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGADIALEPADSGDASGAPKIGTAWVAIPTLGYAVSYADAYSSPIMMGLVVWILFVFVVRALEPYMSTARRRLPA
Ga0184618_101448182	3300018071	Groundwater Sediment	VSRRREVRPIRGAAHVFATIVAVAVMATILTLSGALMAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGADIALEPAVSGDVSGAPRIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVIAVRALEPYISTARRRLPA
Ga0184640_100983522	3300018074	Groundwater Sediment	LSRRMAVRPVRWAAQTLAPIVALAVTATIIVLALGLLAVRFVGLNAYVVQGGPTESMVPIGSLVLTTPVSSQAPTLGTAWVAIPTLGYAVTYAEAYSSPIVMGLLVWVIFLFAMRALEPHTSTARRRLPA
Ga0184632_100982292	3300018075	Groundwater Sediment	MASFAPEQESAGGRHREGGGAEPGGKRVSRRRAVRPIREAARVFAPVVAVAVIATILTLSLALLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPAAVEPPGSGDASTAPQIGTAWVAIPTLGYAVTYADAYSSPILMGLVVWILFIFAVRALEPHMSTARRRQPA
Ga0184609_100920411	3300018076	Groundwater Sediment	VSRRRAVRPIRGAVRVFATIVAFAVMTTILTLSFGLLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGADIALEVAVSGDVSGAPRIGTAWVAIPTLGYAVSYADAY
Ga0193739_10445013	3300020003	Soil	VTRRMAVRPVRWAAQTIAPIVALAVTATIIVLALGLLAIRFVGLNAYVVQGGPTESQVPIGSLVLTPVSSEPVVDEVSGDASQAPKIGTAWVAIPTLGYAVTYAEAYASPIVMGLVVWILFVFALRALEPHMSTARRRLPA
Ga0210382_100508613	3300021080	Groundwater Sediment	VSRRRAVRPIRGAAHVFATIVAVAVMATILTLSGALMAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGTNIPSEPAVSGDASGAPTIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVIAVRALEPYMSTARRRLPA
Ga0210382_102839271	3300021080	Groundwater Sediment	VSRRRAVRPIREAARVFAPVVAVAVVATILTLSLALLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGADIALEPAVSGDVSGAPRIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVF
Ga0193719_102073971	3300021344	Soil	VSRRRAVRPIRGAAHVFATIVAVAVMATILTLSGALMAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGTNIAAEPADSGDASGAPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILF
Ga0222623_100867121	3300022694	Groundwater Sediment	VRLCHRAAVAKSGEASRVTRRMAVRPVRWAAQTIAPIVALAVTATIIVLALGLLAVRFVGLNAYVVQGGPAESQVPIGSLVLTPVSFEPVVDEVSGDVSQAPKIGTAWVAIPTLGYAVTYAEAYSWPIAIGLVTWALFLIAVRALAPYMSTVRRRLPA
Ga0222622_103556682	3300022756	Groundwater Sediment	VTRRKAVRPVRWAAQRLAPIVGLAVIAAIVALSLGLIAVRSVGLSTYVVQGGPTESMLPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPYMSTARRRLPA
Ga0207653_1000020611	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTLGYAVSYVDAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLLA
Ga0207684_107424652	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAI
Ga0207660_100648742	3300025917	Corn Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAVSYADAYASPIVMGLVVWILFVFAVRALEPYMSTARRRLPA
Ga0207662_102140351	3300025918	Switchgrass Rhizosphere	VTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYVVNYADAYSSPIVMGLVVWILFVFAMRALEPYMSTARRRLPA
Ga0207686_100999222	3300025934	Miscanthus Rhizosphere	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGASIAEEPPASGDASAAPQIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVIAVRALEPYMSTARRRLPA
Ga0207670_106269282	3300025936	Switchgrass Rhizosphere	RAIRPIRGAARVFAPIVAVAVIATILTLSFALLAVRFAGLSTYVVQGGPTESMVPIGSLVLVAPGASAADITLESADTGDASGASKIGTAWVAIPTLGYAVNYADAYSSPIVMGLVVWILFVFAVRALEPYMSTARRRLPA
Ga0207708_100871732	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPPRGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDHTSAAPKIGTAWVAIPTLGYAVNYADAYSSPIVMGLVVWVLFVIAVRALEPYMSTARRRLLA
Ga0207675_1006712882	3300026118	Switchgrass Rhizosphere	MPPGGGGKPGEAYHVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLMAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAVNYADAYSSPIVMGLVVWILFVFAMRALEPYMSTARRRLPA
Ga0207570_10187911	3300026944	Soil	MPPGGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVPSGPSIAAEPPASGDASAAPQIGTAWVAIPTL
Ga0209814_104893671	3300027873	Populus Rhizosphere	RWAARKFAPVVALVVTSTVIVLALGLLAVRFVGFNAYVVQGGPAESMVPIGSLVLAVPVTTESVAAIDEKPGVSAPAPKVDTAWVAIPTLGYAVAYAEAYSLPIVMGLVVWFLFVFSLPLVGSRSSTARRRLPA
Ga0209481_106811712	3300027880	Populus Rhizosphere	ARKFAPVVALVVTSTVIVLALGLLAVRFVGFNAYVVQGGPAESMVPIGSLVLAVPVTTESVAAIDEKPGVSAPAPKVDTAWVAIPTLGYAVAYAEAYSLPIVMGLVVWFLFVFSLPLVGSRSSTGRRRLPA
Ga0209486_100054222	3300027886	Agricultural Soil	MASLLPEAESASSATGGGGNVGEASRVTRQMAVRPVRWAAQKFAPIVALAVTATIIVLALGLLAIRFVGLNAYVVQGGPTESMVPIGSLVLTASQAPTIDTAWVAIPTLGYAVTYAEAYASPIVMGLIVWILFVFALRALEPHTSTARRRLPA
Ga0209486_104052291	3300027886	Agricultural Soil	MAVRPVRWAARKFAPIVAVAVTATIIVLALGLLAVRFVGLNAYVVQGGPTESMVPIGSLVLTAPTSAPTIDTAWVAIPTLGYAVTYAEAYASPIVMGLVVWILFVFALRALEPHMSIARRRLPA
Ga0209382_103121602	3300027909	Populus Rhizosphere	VTRRMAVRPVRWAARKFAPVVALVVTSTVIVLALGLLAVRFVGFNAYVVQGGPAESMVPIGSLVLAVPVTTESVAAIDEKPGVSAPAPKVDTAWVAIPTLGYAVAYAEAYSLPIVMGLVVWFLFVFSLPLVGSRSSTGRRRLPA
Ga0307301_101691881	3300028719	Soil	GGGISGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMLPIGSLVLVAPVPSGAAIAVEPETSDDTSVAPKIGTAWVAIPTLGYAVNYADAYSSPIVMGLFVWILFVFAVRALEPYMSTARRRLPA
Ga0307282_103286001	3300028784	Soil	MARRKADRPVRWAARMFAAIVALAVTTAVIALSFGLIAVRFVGLDAYVVQGAPTESMVPIGSLVLVAPVPHGAVAVIDQVDNGDATSAPTIGTAWVAIPTLGYAVTYAQSYSPPIVIGLVTWILFLITMRALAPHFS
Ga0307290_100614273	3300028791	Soil	VRRVPPDGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPAPSGVAIAVEPETSDDTSASPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPYMSSARRRLPA
Ga0307292_104844931	3300028811	Soil	VTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESMLPIGSLVLVAPAPSGVAIAVEPETSDDTSASPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVW
Ga0307302_103745111	3300028814	Soil	VTRRIAVRPVRWAARKFAPIVALVVTATIIVLALGLLAVRFVGLNAYVVQGGPAESQVPIGSLVLTPVSSGPVIDEVSGDATQAPTIGTAWVAIPTLGYAVTYAEAYASPIVMGLVVWILFVFALRALESH
Ga0307296_101860852	3300028819	Soil	VTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRFVGLSTYVVQGGPTESILPIGSLVLVAPGPGVAVAAEPPDSGDTSAGPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPYMSTARRRLPA
Ga0307296_104224821	3300028819	Soil	VSRRRAVRPIRGAVRVFASIVAFAVVTTILTLSFGLLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAIEPQQSGDTSAAPTIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWIFFVIAV
Ga0307310_105300811	3300028824	Soil	VSRRRAVRPIRGAVRVFASIVAFAVVTTILTLSFGLLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGADIALEVAVSGDVSGAPRIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPYMSTARRRLPA
Ga0307310_105321272	3300028824	Soil	VTRRKAVRPVRWAAQRLAPIVGLAVIATIVALSLGLIAVRSVGLSTYVVQGGPTESMVPIGSLVLVAPVSTGGAIALEPADGGEASGAPKIGTAWVAIPTLGYAVSYADAYSSPI
Ga0307312_103447191	3300028828	Soil	VSRRRAIRPIRGAARVFAPVVAVAVIAMILTLSLALLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPGVAVAAEPPDSGDTSAGPKIGTAWVAIPTLGYAVSYADAYSSPIAMGLVVWILFVIAVRALEPYMSTARRRLPA
Ga0307312_105986381	3300028828	Soil	RTDSAMASFWPEAESASSATGRRWQPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIASIVVLSLGLIAVRLVGLSTYVVQGGPTESMVPIGSLVLVAPAPSGVAIAVEPETSDDTSASPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPYMSSARRRLPA
Ga0307312_107577971	3300028828	Soil	VTRRKAVRPVRWAAQRLAPVVGLAVIAAIVALSLGLIAVRFVGLSTYVVQGGPTESMLPIGSLVLVAPVPYGSAVTVEPETRDDTSAAPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPYMSNARRRLPA
Ga0307312_109083551	3300028828	Soil	MARRKADRPVRWAARMFAAIVALAVTTAVIALSFGLIAVRFVGLDAYVVQGAPTESMVPIGSLVLVAPVPHGAVAAIDQDDNGDATSAPTIGTAWVAIPTLGYAVTYAQSYSPPIVIGLVVWTFTIIAARALAPFMSTARRRLPA
Ga0307278_101732351	3300028878	Soil	ASIVVLSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPGVAVAAEPPDSGGTSAGPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVVWILFVFAVRALEPYMSTARRRLPA
Ga0307278_102289302	3300028878	Soil	VRRVLPDGGGKPGEACQVTRRKAVRPVRWAAQRLAPIVGLAVIAAIVALSLGLIAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSSGAAIAVEPETSDDTSAAPKIGTAWVAIPTLGYAVSYADAYSSPIVMGLVV
Ga0307308_101810302	3300028884	Soil	VSRRRAIRPIRGAARVFAPVVAVAVIAMILTLSLALLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPGPGVAVAAEPPDSGDTSAGPKIGTAWVAIPTLGYAVSYADAYSSPIAMGLVVWILFVIAVRVLEPHMST
Ga0307308_103132771	3300028884	Soil	MARRKADRPVRWAARMFAAIVALAVTTAVIALSFGLIAVRFVGLDAYVVQGAPTESMVPIGSLVLVAPFPHGAVAAIDQDDNGDATSAPTIGTAWVAIPTLGYAVTYAQSYSPPIVIGLVVWTFTIIAARALAPFMS
Ga0308206_11109191	3300030903	Soil	VTRRIAVRPVRWAARKFAPIVALVVTATIIVLALGLLAVRFVGLNAYVVQGGPAESQVPIGSLVLTPVSSGPVIDDVSGDATQAPTIGTAWVAIPTLGYAVTYAEAYASPIVMGLVVWILFVFALRALESHMATARRRLP
Ga0326597_100101203	3300031965	Soil	MFATIVAVAVLATILTLSFALLAVRFVGLSTYVVQGGPTESMVPIGSLVLVAPVSTAAVAAIEPDESDDASAAPIVGTAWIAIPTLGYAVTYADAYSSPIVIGLVVWILFVIAVRALERYMSAARRRLPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093467

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences