Metagenome / Metatranscriptome Family F093265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093265
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	85 residues
Representative Sequence	MADKDKIDRELADAGWEPDGTFSEHLAIGESGDLCVLVHRSTWETDEPTYELYDVGQHVSYWVHEIPTPERAAKLLKEHGEPSEEE
Number of Associated Samples	67
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.30 %
% of genes near scaffold ends (potentially truncated)	30.19 %
% of genes from short scaffolds (< 2000 bps)	85.85 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.113 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Desert → Soil (36.792 % of family members)
Environment Ontology (ENVO)	Unclassified (42.453 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.925 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.68% β-sheet: 27.19% Coil/Unstructured: 49.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF03551	PadR	36.79
PF00294	PfkB	1.89
PF00313	CSD	1.89
PF00563	EAL	1.89
PF08241	Methyltransf_11	0.94
PF00248	Aldo_ket_red	0.94
PF05532	CsbD	0.94
PF02861	Clp_N	0.94
PF08353	MurT_C	0.94
PF02148	zf-UBP	0.94
PF00583	Acetyltransf_1	0.94
PF00370	FGGY_N	0.94
PF12728	HTH_17	0.94
PF14559	TPR_19	0.94
PF00403	HMA	0.94
PF05343	Peptidase_M42	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	36.79
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	36.79
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	36.79
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.89
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.89
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.89
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.89
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.94
COG0769	UDP-N-acetylmuramyl tripeptide synthase	Cell wall/membrane/envelope biogenesis [M]	0.94
COG1362	Aspartyl aminopeptidase	Amino acid transport and metabolism [E]	0.94
COG1363	Putative aminopeptidase FrvX	Carbohydrate transport and metabolism [G]	0.94
COG2195	Di- or tripeptidase	Amino acid transport and metabolism [E]	0.94
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.94
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	0.94
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.94
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.11 %
Viruses	superkingdom	All Organisms → Viruses	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	85.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	85.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	85.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	74.53 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	6.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.94 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	74.53 %
Rubrobacter xylanophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	3.77 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.89 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.94 %
Rubrobacter radiotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	0.94 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805011\|FNTS010_GJXY8QZ02F4IEG	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	511	Open in IMG/M
2209111000\|2209204110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	635	Open in IMG/M
2209111000\|2209989353	All Organisms → cellular organisms → Bacteria → Terrabacteria group	722	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c008081	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c024815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1113	Open in IMG/M
3300000750\|JGI12272J11983_1166929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	513	Open in IMG/M
3300000831\|JGI12271J12027_1194086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	576	Open in IMG/M
3300000833\|JGI12273J12029_10530699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	537	Open in IMG/M
3300002568\|C688J35102_119936628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	819	Open in IMG/M
3300005506\|Ga0068912_10452663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	645	Open in IMG/M
3300005506\|Ga0068912_11085222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	512	Open in IMG/M
3300005506\|Ga0068912_11184807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	657	Open in IMG/M
3300005562\|Ga0058697_10063557	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300005562\|Ga0058697_10097870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1212	Open in IMG/M
3300005562\|Ga0058697_10138546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1051	Open in IMG/M
3300007790\|Ga0105679_10450689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1044	Open in IMG/M
3300007790\|Ga0105679_10723890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1014	Open in IMG/M
3300007790\|Ga0105679_11009677	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300007790\|Ga0105679_11028893	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300009789\|Ga0126307_10131902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1995	Open in IMG/M
3300009789\|Ga0126307_11569369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	534	Open in IMG/M
3300010036\|Ga0126305_11101289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	547	Open in IMG/M
3300010039\|Ga0126309_10014393	All Organisms → cellular organisms → Bacteria	3338	Open in IMG/M
3300010039\|Ga0126309_10022670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans	2765	Open in IMG/M
3300010039\|Ga0126309_10022688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2764	Open in IMG/M
3300010039\|Ga0126309_10023571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	2722	Open in IMG/M
3300010039\|Ga0126309_10270116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	971	Open in IMG/M
3300010039\|Ga0126309_10534218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	727	Open in IMG/M
3300010044\|Ga0126310_10153837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1467	Open in IMG/M
3300010044\|Ga0126310_10524496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	870	Open in IMG/M
3300010137\|Ga0126323_1079338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	526	Open in IMG/M
3300010166\|Ga0126306_10072674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2435	Open in IMG/M
3300010166\|Ga0126306_10196702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1521	Open in IMG/M
3300012042\|Ga0136627_1261469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	554	Open in IMG/M
3300012091\|Ga0136625_1065108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1302	Open in IMG/M
3300012091\|Ga0136625_1096433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1036	Open in IMG/M
3300012183\|Ga0136624_1039251	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300012187\|Ga0136622_10012159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	3659	Open in IMG/M
3300012187\|Ga0136622_10346277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	623	Open in IMG/M
3300012188\|Ga0136618_10053446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1786	Open in IMG/M
3300012684\|Ga0136614_10860022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	630	Open in IMG/M
3300017787\|Ga0183260_10095566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2156	Open in IMG/M
3300017789\|Ga0136617_10020257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	5935	Open in IMG/M
3300018422\|Ga0190265_10162723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2199	Open in IMG/M
3300018432\|Ga0190275_10164620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2060	Open in IMG/M
3300018465\|Ga0190269_10204103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1074	Open in IMG/M
3300018465\|Ga0190269_10612216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	739	Open in IMG/M
3300018465\|Ga0190269_10776321	All Organisms → cellular organisms → Bacteria → Terrabacteria group	685	Open in IMG/M
3300018466\|Ga0190268_10387484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	891	Open in IMG/M
3300018757\|Ga0193612_1082430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	533	Open in IMG/M
3300018875\|Ga0193608_1017014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1566	Open in IMG/M
3300018875\|Ga0193608_1034072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	1129	Open in IMG/M
3300018875\|Ga0193608_1051778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	911	Open in IMG/M
3300018877\|Ga0193600_1112114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	633	Open in IMG/M
3300018891\|Ga0193610_1071123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	926	Open in IMG/M
3300018910\|Ga0193598_1019167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	1809	Open in IMG/M
3300018910\|Ga0193598_1106901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	643	Open in IMG/M
3300018910\|Ga0193598_1107105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	643	Open in IMG/M
3300018910\|Ga0193598_1136652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	556	Open in IMG/M
3300018915\|Ga0193591_1064138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1242	Open in IMG/M
3300018915\|Ga0193591_1071747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1155	Open in IMG/M
3300018917\|Ga0193611_1003642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	6535	Open in IMG/M
3300018918\|Ga0193616_1141363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	661	Open in IMG/M
3300018918\|Ga0193616_1179263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	569	Open in IMG/M
3300018920\|Ga0190273_10037901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2341	Open in IMG/M
3300018920\|Ga0190273_12302010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	509	Open in IMG/M
3300018931\|Ga0193601_1114698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	751	Open in IMG/M
3300018933\|Ga0193614_1054316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1129	Open in IMG/M
3300018933\|Ga0193614_1105950	All Organisms → cellular organisms → Bacteria → Terrabacteria group	781	Open in IMG/M
3300018933\|Ga0193614_1167372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	598	Open in IMG/M
3300018939\|Ga0193593_1040122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1186	Open in IMG/M
3300018939\|Ga0193593_1083843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	800	Open in IMG/M
3300018939\|Ga0193593_1141886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	584	Open in IMG/M
3300018946\|Ga0193599_1173213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	686	Open in IMG/M
3300018954\|Ga0193590_1066329	All Organisms → cellular organisms → Bacteria → Terrabacteria group	958	Open in IMG/M
3300018984\|Ga0193605_1015645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2352	Open in IMG/M
3300019132\|Ga0193604_1012282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1466	Open in IMG/M
3300019135\|Ga0193602_1032259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1269	Open in IMG/M
3300019135\|Ga0193602_1097681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	678	Open in IMG/M
3300019142\|Ga0193597_1005285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus	5342	Open in IMG/M
3300019377\|Ga0190264_11024207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	663	Open in IMG/M
3300019767\|Ga0190267_10849660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	616	Open in IMG/M
3300020181\|Ga0196958_10119037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	890	Open in IMG/M
3300021184\|Ga0196959_10067308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	773	Open in IMG/M
3300021184\|Ga0196959_10135529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	593	Open in IMG/M
3300024426\|Ga0196960_10065816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1037	Open in IMG/M
3300024426\|Ga0196960_10117866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	806	Open in IMG/M
3300024430\|Ga0196962_10004841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4208	Open in IMG/M
3300028705\|Ga0307276_10160811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	576	Open in IMG/M
3300030496\|Ga0268240_10010513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1566	Open in IMG/M
3300031039\|Ga0102760_10934134	All Organisms → Viruses → Predicted Viral	1306	Open in IMG/M
3300031091\|Ga0308201_10335832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	549	Open in IMG/M
3300031092\|Ga0308204_10135291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	717	Open in IMG/M
3300031092\|Ga0308204_10147720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	695	Open in IMG/M
3300032159\|Ga0268251_10171884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	832	Open in IMG/M
3300032159\|Ga0268251_10374730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	610	Open in IMG/M
3300033988\|Ga0334909_017922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	910	Open in IMG/M
3300033989\|Ga0334924_009958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1128	Open in IMG/M
3300034027\|Ga0334949_043015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1281	Open in IMG/M
3300034027\|Ga0334949_135063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	636	Open in IMG/M
3300034028\|Ga0334950_023133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1362	Open in IMG/M
3300034133\|Ga0334916_005451	All Organisms → Viruses → Predicted Viral	1349	Open in IMG/M
3300034144\|Ga0334962_020869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	828	Open in IMG/M
3300034221\|Ga0334937_018860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1784	Open in IMG/M
3300034393\|Ga0334914_009736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1050	Open in IMG/M
3300034687\|Ga0334905_005677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1769	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.28%
Host-Associated	Host-Associated	4.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.91%
Aquatic	Environmental → Aquatic	10.38%
Plants	Host-Associated → Plants	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.91%
Freshwater	Environmental → Aquatic → Freshwater	10.38%
Phylloplane	Host-Associated → Plants → Phylloplane	4.72%

Habitat	Taxonomy	Distribution
Sand	Environmental → Terrestrial → Soil → Sand	46.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.08%
Ice	Environmental → Aquatic → Freshwater → Ice	9.43%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	5.66%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.94%
Loam	Environmental → Terrestrial → Soil → Loam	0.94%

Habitat	Taxonomy	Distribution
Desert	Environmental → Terrestrial → Soil → Sand → Desert	46.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.42%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	9.43%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.72%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	36.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.21%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	12.26%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	9.43%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	9.43%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.72%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	1.89%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.89%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	1.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805011	Soil microbial communities from sample at Multiple FACE and OTC sites	Environmental	Open in IMG/M
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000831	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate B) D5B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300000833	Soil microbial communities from Moab, Utah, sample - Soil Crust Prior wet up (biological replicate C) 0C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012042	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018757	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018877	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018891	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018915	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018917	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018918	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018933	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 42 hrs v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018954	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019132	Soil crust microbial communities from Colorado Plateau, Utah, USA - early-mid stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300019135	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033988	Soil microbial communities from Mojave Desert, California, United States - 5NOC	Environmental	Open in IMG/M
3300033989	Biocrust microbial communities from Mojave Desert, California, United States - 20HNC	Environmental	Open in IMG/M
3300034027	Biocrust microbial communities from Mojave Desert, California, United States - 45SNC	Environmental	Open in IMG/M
3300034028	Biocrust microbial communities from Mojave Desert, California, United States - 46SNC	Environmental	Open in IMG/M
3300034133	Biocrust microbial communities from Mojave Desert, California, United States - 12HMC	Environmental	Open in IMG/M
3300034144	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 58SNS	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034393	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 10HMS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS010_03345260	2119805011	Soil	IEEKQMADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGQHISYWVHEIPTPDLAAKLLKEYGEPSEEE
2209238032	2209111000	Soil	MADKDRIDRELADAGWVPDGTFSEHLAIGESXDLCVLVHRSTWETDEPTYELYDAGRHVSYWVHEIPTPVQAAKLLEEYGEPSEGE
2210163697	2209111000	Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRNTWETNVPTYELYDAARHVSYWVHEILTPERATK
LCrCPGB2aDRAFT_0080812	3300000095	Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRNTWETNVPTYELYDAARHVSYWVHEILTPERATKLLEEHGKPPEEE*
LCrCPGB2aDRAFT_0248151	3300000095	Soil	MADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE*
JGI12272J11983_11669291	3300000750	Soil	MVDKAKIDRELEEAGWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVNRHLSYWVHEIPTPERATELLEEHGEAPEEE*
JGI12271J12027_11940862	3300000831	Soil	MPDKDRIDRELAEAGWVPDGTFSEHLAIGESDDFCVLVHRSTWDTGDPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE*
JGI12273J12029_105306991	3300000833	Soil	LADAGWEPDGTFSEHLAIGESGDLCVLVHRSTWETDQPTYELYDVEQHISYWVHEIPTPKQAAELLEQHGETPEETE*
C688J35102_1199366282	3300002568	Soil	MNQGTTLGQDRIDRELEEAGWETDGSFSEHLSIGNSGYLCVLVHRSTWETDEPAYELYDVWRNVSFWVHEVPTPDQAARLLEEHG*
Ga0068912_104526632	3300005506	Soil	MAVKDKIDQKLADAGWEPDGTFSEHLAIGESGDLCVLVHRSTWETDQPTYELYDVEQHISYWVHEIPTPKQAAELLEQHGETPEETE*
Ga0068912_110852222	3300005506	Soil	MTDKGRIDRALAEAGWVPDGTFSEHLAIGESDDFCVLVHRSTWDTGDPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE*
Ga0068912_111848071	3300005506	Soil	GWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVNRHLSYWVHEIPTPERATELLEEHGEAPEEE*
Ga0058697_100635572	3300005562	Agave	MADKDRVDRELADAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPTYELYDVERHVSYWVHEIPTPDHAAKLLEEHGEPPEEK*
Ga0058697_100978702	3300005562	Agave	MLGVPLAEGEEPVANPNKMLGQDRVDRELADAGWETDGSFSEHLAVGESGDLCVLVHRSTWETNEPAYELYDVAQDVSYWVHEVPTPKQAAKLLEEHGEASDETEQGAI*
Ga0058697_101385461	3300005562	Agave	MADKDRIDRELAGAGWDPDGTFSEHLAIGESGDLCVLVHRSTWETDEPTYELYDAERNVSYWVHEILTPERATKLLEEHGKTPEEE*
Ga0105679_104506892	3300007790	Soil	EAMVEQDKIDQELVNAGWEPDGIFSEHLAIGESGDLCILVHRSTWGTDEPTYELYNVGREVSYWVHEIPTPERAAMLLEEHGEPL*
Ga0105679_107238902	3300007790	Soil	MTLRSQRRRAMVGQENIDQELAGAGWEPDGTFSEHLAIGESGDLCILVHRSTWGTDQPTYELYDVEREVSYWVHEIPTPERAAMLLEKHGEPLNETD*
Ga0105679_110096773	3300007790	Soil	MADKDRIDRELAEAGWAPDGTFSEHLAIGESDDLCVLVHRSTWETDEPSYELYDAGRHVSHWVREIPTPAQAAKLLEEHGEPSEEE*
Ga0105679_110288932	3300007790	Soil	MVDRDKIMGKERIDRKLEEAGWSTDGTFSEHLTIGESGDLCVLVHRSTWVTDEPAYELYDVGRHVSFWVHEVPTPERAAVLLEEHGEPPEEE*
Ga0126307_101319024	3300009789	Serpentine Soil	MADKARIDRKLAEAGWKPDGTFSEHLAIGESGDLCVLVHRSTWETDVPTYELYDVGRHVSYWVHEIPTPEW
Ga0126307_115693691	3300009789	Serpentine Soil	RELEEAGWETDGTFSEHLSIGNSGDLCLLVHCSTWETDEPAYELYDVERDISYWVHEVPTPDQAARLLEEHGETPEEE*
Ga0126305_111012891	3300010036	Serpentine Soil	MADQDKIDKELVDAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPAYALYNVGQHISYWVREIPTPEQAAKLLEEHGEPSEEE*
Ga0126309_100143939	3300010039	Serpentine Soil	MVGQDKIDRELTEAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPTYELYDAERHVSYWVHEIPTPEQATVLLEEHGEPSEDVE*
Ga0126309_100226703	3300010039	Serpentine Soil	MASKDKVDQDLLDAGWETDGTFSEHLAIGESGDLCILVHRSTWEADEPTYELYDAGRHVSYWVHKIPTPDQAAKLLAEHGERPEEAE*
Ga0126309_100226882	3300010039	Serpentine Soil	MADKDRVDRDLADAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPTYELYDVGRHVSYWVHEILTPERAAKLLEEHGEPSEEE*
Ga0126309_100235714	3300010039	Serpentine Soil	MMDKDKIDRELAEAGWEPDGTFSGHLAIGESGDLCILVHRSTWETGEPTYELYDAGQHVSYWVHKIPTPERAAMLLEEHGEPP
Ga0126309_102701162	3300010039	Serpentine Soil	MADKDKIDRELAEAGWSTDGSFSEHLAIGNWGDLCVLVHRSTWENDEPAYELYDAGRHVSYWMHEVPTPERAAVLLEEHGEPSEDAE*
Ga0126309_105342181	3300010039	Serpentine Soil	MADKDKIDRELADAGWVPDGTFSEHLAIGESGDLCILVHRSTWETDEPTYELYDVGRHVSYWVHEIPTPDLAAKLLEEYGEPSEEE*
Ga0126310_101538373	3300010044	Serpentine Soil	MADQDKIDQQLADAGWEPDGTFSEHLAIGESGDLCILVHSSTWKTDEPAYELYNVGQHISYWVHEIPTPEQAAKMLEEHGKPPEE
Ga0126310_105244962	3300010044	Serpentine Soil	MVGQDKIDRELAEAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPTYELYDAGRHVSYWVHEIPTPEQSAMLLEEHGEPPGEPE*
Ga0126323_10793382	3300010137	Soil	MVGQDKIDRELADAGWEPDGTFSEHLAIGESGDLCILVHRSTWETGEPTYELYDAGRHVSYWIHEIPTPEQAAKLLEEHGQTPEEE*
Ga0126306_100726743	3300010166	Serpentine Soil	MADQDKIDKELVDAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPAYELYNVGQHISYWVREIPTPEQAAKLLEEHGKPPEE*
Ga0126306_101967022	3300010166	Serpentine Soil	MADKDRVDRDLADAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPTYELYDVGRHVSYWVHEIPTPERAAKLLEEHGEPSEEE*
Ga0136627_12614691	3300012042	Polar Desert Sand	MADKDKIDRELADAGWEPDGTFSEHLAIGESGGLCILVHRSTWETDEPAYELYDVGQHVSYWVHEVPTPERAAVLLEEHGEPSEEE*
Ga0136625_10651082	3300012091	Polar Desert Sand	MADKDKIDRELADAGWEPDGTFSEHLAIGESGDLCVLVHRSTWETDEPTYELYDVGQHVSYWVHEIPTPERAAKLLKEHGEPSEEE*
Ga0136625_10964331	3300012091	Polar Desert Sand	MADKDKIDRELAEAGWEPDGTFSEHLAIGNSDDLCVLVHRSTWETDEPAYELYNAGQHVSYWVHEVPTPERAAVLLKEHGEPPE
Ga0136624_10392512	3300012183	Polar Desert Sand	MADKDKIDRELADAGWEPDGTFSEHLAIGESGDLCVLVHRSTWETDEPTYELYDVGQHVSYWVHEIPTPERAAVLLKQHGEPSEEE*
Ga0136622_100121592	3300012187	Polar Desert Sand	MADKDKVDQELADAGWEPDGTFSEYLAIGNSDDLCVLVHRSTLETDDPVYELYDVGQHVSYWVHEVPTPERAVVLLKEHGEPPEEE*
Ga0136622_103462772	3300012187	Polar Desert Sand	MADKDKIDRELADAGWEPDGTFSEHLAIGNSDDLCVLVHRSTWETDEPAYELYDVGQHVSYWVHEVPTPERAAVLLKEHGEPPEEE*
Ga0136618_100534464	3300012188	Polar Desert Sand	MADKDKIDRKLADAGWEPDGTFSEHLAIGESGGLCILVHRSTWETDEPTYELYDVGQHVSYWVHEVPTPERAAVLLKEHGEPPEEE*
Ga0136614_108600221	3300012684	Polar Desert Sand	MADKDKIDRALADTGWEPDGTFSEHLAIGNSDDLCVLVHRSTWETDEPAYELYDVGQHVSYWVHEVPTPERAAVLLKEHGEPPEEE*
Ga0183260_100955664	3300017787	Polar Desert Sand	MADKDKIDRELADAGWEPDGTFSEHLAIGNSDDLCVLVHRSTWETDEPAYELYDVGQHVSYWVHEVPTPERAAVLLKEHGEPPEEE
Ga0136617_100202577	3300017789	Polar Desert Sand	MADKDKIDRALADTGWEPDGTFSEHLAIGNSDDLCVLVHRSTWETDEPAYELYNAGQHVSYWVHEVPTPERAAVLLKEHGEPPEEG
Ga0190265_101627232	3300018422	Soil	MTDKDMIDRELADAGWEPDGTFSDHLAIGESGDLCILVHRSTWESNEPTYELYDVGQHVSYWVHEIPTPERAAALLEEHGESSEEE
Ga0190275_101646202	3300018432	Soil	MADKDRIDRELADAGWEPDGTFSDYLSIGESGDLCILVHRSTWGTDEPTYELYDVGQHVSYWVHEIPTPERAAALLEEHGETPEEE
Ga0190269_102041032	3300018465	Soil	MVDQNKAMGKDRIDRELAEAGWEPDGTFSEHLSIGESGDLCVLVPRSTWETDEPAYELYDVERHVSYWVHEFPTPERAAMLLEEHGEPPEEE
Ga0190269_106122161	3300018465	Soil	MADQDKIGKELADAGWEPDGTFSEHLAIGESGDLCILVHRSTWETDEPTYELYDVGRHVSCWVHEIPTPERAAVLLEEHGEPSEEE
Ga0190269_107763212	3300018465	Soil	MADKDRVDRDLVDAGWEPDGTFSDHLSIGESGDLCILVHRSTWETDEPTYELYDVGRHVSYWVHEIPTPERAA
Ga0190268_103874842	3300018466	Soil	MADKAKIDQKLAEAGWEPDGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVDKHVSYWVHEIPTPERATKLLEEHGKPPEEE
Ga0193612_10824301	3300018757	Soil	KAKIDRELEEAGWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVNRHLSYWVHEIPTPERATELLEEHGEAPEEE
Ga0193608_10170142	3300018875	Soil	MVDKAKIDRELEEAGWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVNRHLSYWVHEIPTPERATELLEEHGEAPEEE
Ga0193608_10340721	3300018875	Soil	MADKGKIDQELADAGWEPVGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAVRYVSYWVHEIPRSERGAVLLEKHGELSK
Ga0193608_10517782	3300018875	Soil	MADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0193600_11121142	3300018877	Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRNTWETNVPTYELYDAARHVSYWVHEIPTPERATKLLEEHGETPEEE
Ga0193610_10711231	3300018891	Soil	MPDKDRIDRELAEAGWVPDGTFSEHLAIGESDDFCVLVHRSTWDTGAPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE
Ga0193598_10191673	3300018910	Soil	MADKGKIDQELADAGWEPVGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAVRYVSYWVHEIPRSERGAVLLEKHGELSKEE
Ga0193598_11069011	3300018910	Soil	MADKDRIDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0193598_11071051	3300018910	Soil	RALTEAGWVPDGTFSEHLAIGESDDFCVLVHRSTWDTGDPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE
Ga0193598_11366521	3300018910	Soil	MADKDKIDRELADAGWSPDGTFSEHLAIGSSGDLCVLVHRSTWETDEPAYELYDVDKHVSYWVHEIPTPERAAMLLEEHGEPPEEE
Ga0193591_10641382	3300018915	Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRNTWETNVPTYELYDAARHVSYWVHEILTPERATKLLEEHGKPPEEE
Ga0193591_10717473	3300018915	Soil	MTDKGRIDRALAEAGWVPDGTFSEHLAIGESDDFCVLVHRSTWDTGDPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE
Ga0193611_10036422	3300018917	Soil	MGVAYGADKAKIDRELEEAGWEADGTFSEHLSIGESGDLCVLVHRSTWETNAPAYELYDVDKHVSYWVHEIPTPEQAATMLEEHGRTPEEE
Ga0193616_11413632	3300018918	Soil	AGWTTNGTFAEHLTIGESGDLCLLVHRNTWETNVPTYELYDAARHVSYWVHEILTPERATKLLEEHGKPPEEE
Ga0193616_11792631	3300018918	Soil	IDRKLEEAGWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVDKHVSYWVHEIPTPEQAATMLEEHGRTPEEE
Ga0190273_100379011	3300018920	Soil	MADKDMIDRELADAGWEPDGTFSDHLAIGESGELCILVHRSTWETDKPTYELYDVGQHVSYWVHEIPTPVRAAALLEEHGESSEEE
Ga0190273_123020101	3300018920	Soil	MADKDMIDRELTDAGWEPDGTFSNHLAIGESGDLCVLVHRSTWETEEPTYELYDAGQHVSYWVHEIPTPERAAALLEEHGEPSEEE
Ga0193601_11146982	3300018931	Soil	MADKGKIDRKLEEAGWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVGRDVSYWVHEVPTPERAAAMLEEHGKPPEE
Ga0193614_10543161	3300018933	Soil	DKIDRELADAGWSPDGTFSEHLAIGSSGDLCVLVHRSTWETDEPAYELYDVDKHVSYWVHEIPTPERAAMLLEEHGEPPEEE
Ga0193614_11059502	3300018933	Soil	MADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLL
Ga0193614_11673722	3300018933	Soil	MADKAKIDRELEEAGWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYDVERDVSYWVHEVPTPDRAAALLEEHG
Ga0193593_10401221	3300018939	Soil	MTDKGRIDRALAEAGWVPDGTFSEHLAIGESDDFCVLVHRSTWDTDDPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE
Ga0193593_10838431	3300018939	Soil	DKDRIDRKLEEAGWEADGTFSEHLAIGESGDLCVLVHRSTWETDEPAYELYGVGRDVSYWVHEVPTPDRAAALLEEHGEPPEEE
Ga0193593_11418862	3300018939	Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRNTWETNVPTYELYDAARHVSYWVHEILTPERATKLLEEHGEPPEEE
Ga0193599_11732131	3300018946	Soil	MPDKGKIDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGQHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0193590_10663292	3300018954	Soil	MPDKGKIDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGQHISYWVHEIPTPDL
Ga0193605_10156451	3300018984	Soil	VLSLVVWELHMVDKAKIDRELEEAGWETDGTFSEHLSIGESGDLCVLVHRSTWETNAPAYELYDVDKHVSYWVHEIPTPEQAATMLEEHGRTPEEE
Ga0193604_10122822	3300019132	Soil	VPDGTFSEHLAIGESDDFCVLVHRSTWDTGDPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE
Ga0193602_10322593	3300019135	Soil	VSRNAARIGPFSCSVGVGALYGADKAKIDRELEEAGWEADGTFSEHLSIGESGDLCVLVHRSTWETNAPAYELYDVDKHVSYWVHEIPTPEQAATMLEEHGRTPEEE
Ga0193602_10976811	3300019135	Soil	MPDKGKIDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0193597_10052853	3300019142	Soil	MVDKAKIDRELEEAGWEADGTFSEHLSIGESGDLCVLVHRSTWETNAPAYELYDVDKHVSYWVHEIPTPEQAATMLEEHGRTPEEE
Ga0190264_110242071	3300019377	Soil	MADKDKIDRELADAGWEPDGTFSEHLAIGESGDLCIVIHRSTWETDEPTYELYDAGRHVSYWVHEIPRPEQAAKLLEKYGEPSEAE
Ga0190267_108496601	3300019767	Soil	MADKDRVDRHLAAAGWEPDGTFSDHLSIGESDNLCILAHRITWETDEPAYELYDVGRHVSYWVHEIPTPERAAELLEEHGEPSEEE
Ga0196958_101190371	3300020181	Soil	RIDRELAEAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0196959_100673082	3300021184	Soil	MADKDRIDRELAEAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0196959_101355291	3300021184	Soil	GKTVRAMIDWELADVGWETDGSFSKHPAIGNSGDLCVLVPRSTWETDEPAYELYDADKNLSYWMHEIPTSEQAAKL
Ga0196960_100658161	3300024426	Soil	MADKDRIDRELAEAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHVSYWVHEIPTPVQAAKLLEEYGEPSEGE
Ga0196960_101178662	3300024426	Soil	MADKTKIDRELAEAGWETDGSFSEHLAIGNSGELCVLVHRSTWETDEPAYELYDADKHVSYWMHEVPTPGQAATLLEEHG
Ga0196962_100048416	3300024430	Soil	MVRQDKIYRELADTGWETDGSFSEHLAIGHSGDLCVLVHRSTWETDEPTYELYDVGRHVSYWVHEIPAPEQAAKLLEEHGRPPEEAE
Ga0307276_101608111	3300028705	Soil	MADKDKIDQELADAGWEPDGTFSEHLAIGESDDLCVLVHRSTWEKDEPTYELYDAGQHVSCWVHEVPTPDQAAKLLEEHGEPSEEE
Ga0268240_100105132	3300030496	Soil	MADKDRVDRDLAAAGWEPDGTFSDHLAIGESGDLCILVHRSTWETDEPTYELYDVGRHVSYWVHEIPTPERAARLLEEHGEPSEEE
Ga0102760_109341344	3300031039	Soil	MADKDRVDRDLTDAGWEPDGTFSEHLSIGESGDLCILVHRSTWETDEPTYELYDAGRHVSYWVHEIPTPERAAKLLEEHGEPSEEE
Ga0308201_103358321	3300031091	Soil	RDLADAGWEPDGTISEHLSIGESGDLSILAHRSTWETDEPTYELYDVGRHVSYWVHEIPTPERAAELLGEHGEPSEEE
Ga0308204_101352912	3300031092	Soil	DKINKELADAGWEPDGTFSEHLAIGESGDLCILVHRSTWDIDEPAYELYNVGQHISYWVREIPTPEQAAKLLEEHGKPPEE
Ga0308204_101477202	3300031092	Soil	MADKDKIDRELADAGWEPDGTFSEHLAIGESGDLCVLVHRSTWETDEPTYELYDVGQQVSYWVHEIPTPERAAVLLKEHGEPSEEE
Ga0268251_101718841	3300032159	Agave	MADKDRIDRELAGAGWDPDGTFSEHLAIGESGDLCVLVHRSTWETDEPTYELYDAERNVSYWVHEILTPERATKLLEEHGKTPEEE
Ga0268251_103747301	3300032159	Agave	MARQDKIYRELADAGWETDGSFSEHLAIGNAGDLCVLVHRSTWETNEPAYELYDVAQDVSYWVHEVPTPKQAAKLLEEHGEASDETEQGAI
Ga0334909_017922_448_711	3300033988	Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRSTWETNVPTYELYDAARHVSYYWVHEIPTPERATKLLEEHGKPPEGE
Ga0334924_009958_683_1000	3300033989	Hypolithic Biocrust	VSLLSLVGADGTALIEEKQMADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0334949_043015_1_252	3300034027	Biocrust	KDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0334949_135063_135_395	3300034027	Biocrust	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRSTWETNVPTYELYDAARHVSYWVHEIPTPERATKLLEEHGKPPEGE
Ga0334950_023133_445_762	3300034028	Biocrust	VSLLSLVGADSTALIEEKQMADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0334916_005451_1_210	3300034133	Hypolithic Biocrust	MTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRSTWETNVPTYELYDAARHVSYWVHEIPTSE
Ga0334962_020869_14_274	3300034144	Sub-Biocrust Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRSIWETNVPTYELYDAARHVSYWVHEIPTPERATKLLEEHGEPPEEE
Ga0334937_018860_1106_1498	3300034221	Biocrust	MRVIPTALWNNSRLFDTRDCRERLLVSLLSLVGADGTALIEEKQMADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGQHISYWVHEIPTPDLAAKLLEEYGEPSEEE
Ga0334914_009736_600_863	3300034393	Sub-Biocrust Soil	VTDKDKVDRELAEASWTTNGTFAEHLTIGESGDLCLLVHRSTWETNVPTYELYDAARHVSYYWVHEIPTPERATKLLEEHGKPPEGE
Ga0334905_005677_1475_1738	3300034687	Soil	VTDKDKVDRELAEAGWTTNGTFAEHLTIGESGDLCLLVHRSTWETNVPTYELYDAARHVSYYWVHEIPTPERATKLLEEHGKPPEEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093265

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences