Metagenome / Metatranscriptome Family F093162

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093162
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	112 residues
Representative Sequence	MSVLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Number of Associated Samples	89
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	44.23 %
% of genes near scaffold ends (potentially truncated)	55.66 %
% of genes from short scaffolds (< 2000 bps)	83.96 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.868 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.887 % of family members)
Environment Ontology (ENVO)	Unclassified (62.264 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (51.887 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 44.14% Coil/Unstructured: 55.86%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF07369	DUF1488	39.62
PF04392	ABC_sub_bind	2.83
PF08238	Sel1	0.94
PF03631	Virul_fac_BrkB	0.94
PF01812	5-FTHF_cyc-lig	0.94
PF06627	DUF1153	0.94
PF13602	ADH_zinc_N_2	0.94
PF07769	PsiF_repeat	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.83
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.94
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
All Organisms	root	All Organisms	31.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
cellular organisms	root	All Organisms → cellular organisms	31.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.53 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	21.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	21.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	18.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.83 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.94 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Roseomonas coralli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	18.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.83 %
Caballeronia udeis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia udeis	0.94 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.87 %
Roseomonas coralli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	18.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.83 %
Acidisphaera sp. L21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	0.94 %
Caballeronia udeis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia udeis	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005471\|Ga0070698_102123014	Not Available	515	Open in IMG/M
3300005536\|Ga0070697_102103145	Not Available	505	Open in IMG/M
3300006057\|Ga0075026_100993478	Not Available	521	Open in IMG/M
3300009088\|Ga0099830_10851043	Not Available	753	Open in IMG/M
3300009143\|Ga0099792_10743254	Not Available	638	Open in IMG/M
3300010048\|Ga0126373_11101679	Not Available	860	Open in IMG/M
3300010358\|Ga0126370_11827760	Not Available	589	Open in IMG/M
3300010360\|Ga0126372_10892749	Not Available	891	Open in IMG/M
3300010366\|Ga0126379_10541114	Not Available	1243	Open in IMG/M
3300011270\|Ga0137391_10133571	Not Available	2158	Open in IMG/M
3300011270\|Ga0137391_11417249	Not Available	541	Open in IMG/M
3300012096\|Ga0137389_10716606	Not Available	860	Open in IMG/M
3300012189\|Ga0137388_11682267	Not Available	569	Open in IMG/M
3300012203\|Ga0137399_10577979	Not Available	944	Open in IMG/M
3300012203\|Ga0137399_10806609	Not Available	790	Open in IMG/M
3300012203\|Ga0137399_11118331	Not Available	663	Open in IMG/M
3300012918\|Ga0137396_10502851	Not Available	898	Open in IMG/M
3300012923\|Ga0137359_11137392	Not Available	667	Open in IMG/M
3300012925\|Ga0137419_11201914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300012927\|Ga0137416_11715440	Not Available	573	Open in IMG/M
3300012971\|Ga0126369_13038465	Not Available	549	Open in IMG/M
3300015264\|Ga0137403_11445720	Not Available	537	Open in IMG/M
3300016294\|Ga0182041_10144683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1825	Open in IMG/M
3300016319\|Ga0182033_10077859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2362	Open in IMG/M
3300016319\|Ga0182033_10677797	Not Available	901	Open in IMG/M
3300016341\|Ga0182035_10481107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1057	Open in IMG/M
3300016341\|Ga0182035_11619768	Not Available	584	Open in IMG/M
3300016371\|Ga0182034_10030494	All Organisms → cellular organisms → Bacteria → Proteobacteria	3362	Open in IMG/M
3300016387\|Ga0182040_10216373	Not Available	1419	Open in IMG/M
3300016404\|Ga0182037_11121228	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300020580\|Ga0210403_11246764	Not Available	570	Open in IMG/M
3300021168\|Ga0210406_11386014	Not Available	502	Open in IMG/M
3300021405\|Ga0210387_10481131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1103	Open in IMG/M
3300021405\|Ga0210387_11209684	Not Available	656	Open in IMG/M
3300021405\|Ga0210387_11544607	Not Available	567	Open in IMG/M
3300021560\|Ga0126371_10023372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5722	Open in IMG/M
3300021560\|Ga0126371_10277055	Not Available	1799	Open in IMG/M
3300022533\|Ga0242662_10153629	Not Available	698	Open in IMG/M
3300027862\|Ga0209701_10738152	Not Available	503	Open in IMG/M
3300028536\|Ga0137415_10103817	All Organisms → cellular organisms → Bacteria	2693	Open in IMG/M
3300031231\|Ga0170824_104278835	Not Available	507	Open in IMG/M
3300031231\|Ga0170824_107135283	Not Available	886	Open in IMG/M
3300031231\|Ga0170824_125004887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1152	Open in IMG/M
3300031474\|Ga0170818_107173845	Not Available	914	Open in IMG/M
3300031543\|Ga0318516_10229389	Not Available	1074	Open in IMG/M
3300031545\|Ga0318541_10024454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2931	Open in IMG/M
3300031545\|Ga0318541_10208092	Not Available	1083	Open in IMG/M
3300031546\|Ga0318538_10550625	Not Available	626	Open in IMG/M
3300031564\|Ga0318573_10214785	Not Available	1021	Open in IMG/M
3300031572\|Ga0318515_10290792	Not Available	876	Open in IMG/M
3300031573\|Ga0310915_10530943	Not Available	835	Open in IMG/M
3300031640\|Ga0318555_10298025	Not Available	872	Open in IMG/M
3300031680\|Ga0318574_10171752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. L21	1238	Open in IMG/M
3300031681\|Ga0318572_10367415	Not Available	854	Open in IMG/M
3300031682\|Ga0318560_10341484	Not Available	808	Open in IMG/M
3300031719\|Ga0306917_10094170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2134	Open in IMG/M
3300031720\|Ga0307469_10601554	Not Available	983	Open in IMG/M
3300031736\|Ga0318501_10747370	Not Available	540	Open in IMG/M
3300031744\|Ga0306918_10465833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia udeis	988	Open in IMG/M
3300031747\|Ga0318502_10932482	Not Available	528	Open in IMG/M
3300031751\|Ga0318494_10048058	All Organisms → cellular organisms → Bacteria → Proteobacteria	2247	Open in IMG/M
3300031768\|Ga0318509_10358420	Not Available	816	Open in IMG/M
3300031770\|Ga0318521_10072679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1837	Open in IMG/M
3300031777\|Ga0318543_10025339	Not Available	2259	Open in IMG/M
3300031780\|Ga0318508_1018513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1668	Open in IMG/M
3300031781\|Ga0318547_10051189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2223	Open in IMG/M
3300031781\|Ga0318547_10801333	Not Available	587	Open in IMG/M
3300031792\|Ga0318529_10141383	Not Available	1104	Open in IMG/M
3300031794\|Ga0318503_10150199	Not Available	751	Open in IMG/M
3300031796\|Ga0318576_10553146	Not Available	542	Open in IMG/M
3300031798\|Ga0318523_10084510	Not Available	1541	Open in IMG/M
3300031832\|Ga0318499_10361956	Not Available	557	Open in IMG/M
3300031833\|Ga0310917_10094036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1919	Open in IMG/M
3300031835\|Ga0318517_10496049	Not Available	550	Open in IMG/M
3300031845\|Ga0318511_10034738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1949	Open in IMG/M
3300031897\|Ga0318520_11039699	Not Available	518	Open in IMG/M
3300031910\|Ga0306923_10969090	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300031941\|Ga0310912_10472737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	977	Open in IMG/M
3300031942\|Ga0310916_10809537	Not Available	788	Open in IMG/M
3300031945\|Ga0310913_10472271	Not Available	891	Open in IMG/M
3300031946\|Ga0310910_10979749	Not Available	661	Open in IMG/M
3300031947\|Ga0310909_10347394	Not Available	1245	Open in IMG/M
3300031954\|Ga0306926_10313705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1940	Open in IMG/M
3300031954\|Ga0306926_10901875	Not Available	1058	Open in IMG/M
3300032001\|Ga0306922_10089040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	3249	Open in IMG/M
3300032001\|Ga0306922_11714280	Not Available	621	Open in IMG/M
3300032035\|Ga0310911_10026501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2854	Open in IMG/M
3300032039\|Ga0318559_10090528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1344	Open in IMG/M
3300032041\|Ga0318549_10015581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2776	Open in IMG/M
3300032043\|Ga0318556_10146955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1215	Open in IMG/M
3300032052\|Ga0318506_10030633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2056	Open in IMG/M
3300032054\|Ga0318570_10131402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1112	Open in IMG/M
3300032065\|Ga0318513_10046791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	1927	Open in IMG/M
3300032066\|Ga0318514_10453371	Not Available	682	Open in IMG/M
3300032076\|Ga0306924_10155228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas coralli	2621	Open in IMG/M
3300032076\|Ga0306924_10628701	Not Available	1212	Open in IMG/M
3300032090\|Ga0318518_10328817	Not Available	784	Open in IMG/M
3300032094\|Ga0318540_10351989	Not Available	711	Open in IMG/M
3300032174\|Ga0307470_10291440	Not Available	1102	Open in IMG/M
3300032180\|Ga0307471_102691260	Not Available	631	Open in IMG/M
3300032261\|Ga0306920_100877751	Not Available	1313	Open in IMG/M
3300033289\|Ga0310914_10413781	Not Available	1220	Open in IMG/M
3300033290\|Ga0318519_10316610	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300033290\|Ga0318519_10391088	Not Available	827	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.06%
Aquatic	Environmental → Aquatic	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.06%
Sediment	Environmental → Aquatic → Sediment	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	97.17%
Loam	Environmental → Terrestrial → Soil → Loam	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070698_1021230141	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSVLQPTDDFRVSSVGGMGGGDLVTERAPDPVDRSTGTDKSKQASIGARITEVRDGQQTDLGRDYRFEQLPAPNDQIVILNRRGSYDIMRVLYSTHEPEASVYVRWVARGNNIPKIAEVQISALHR
Ga0070697_1021031451	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RQRCGWGTSMSVLQPTDDFSVSSVGGMGVGDLVTERAPDPVDRSHSETDKSKQASIGARITEVRDGQQTDLGRDYHFEQLPAPNDQIVILNRRGSYDIMRVLYSAHEPEASVYVRWVARGDNIPKIAEVQISALHRRQAGTSPRAA*
Ga0075026_1009934781	3300006057	Watersheds	MSVLWPTDDLSISSLGGTGVGDLVTERAPDLANRSHSKTDTVKPKLICARITEVRDDQQIGLDGDYRFEQLPVRNDQIIISNQRGSYDIMRVLYLAHEPEPVVYVRWAARR*
Ga0099830_108510432	3300009088	Vadose Zone Soil	AVRNQDDLARGARMSELRVADDFGISSVRRMGVGDLVTERAPDPVNRSRSEPDEVRQTLICARITEVRSDRQTNLGGDYFFEQLPAPNDQIVILNRWGSYDVMRVLHSAHEPETAVYVRWVAPR*
Ga0099792_107432542	3300009143	Vadose Zone Soil	MSELRAADDFGISSVRRMGGADLVTERAPDPVNRSPSEPDEVRQTLICARITEVRGDRQTNLGGNYFFEQLPAPNDQIVILNRWGSYDTMRVLHSAHEPETAVYVRWVARG*
Ga0126373_111016791	3300010048	Tropical Forest Soil	MSELRADDDVGISSVRRMGVGDLVTAGAPDRVNRSQSEPVEVRQTLICAAITEVRSDRQTNLGGDYFFEQLPAPHDQIVILNRWGSYDILRVLHSVHEPKTAVYVRWVARSTRRLRARLPHR*
Ga0126370_118277602	3300010358	Tropical Forest Soil	VGDLVTARAPDPVNRSQPEPDQVRLTFICAAITEVRSDRQTNLGGDYFFEQLPAPHDQIVILNRWGSYDILRVLHSVHELETAVYVRWVARSTRRLRARLPHR*
Ga0126372_108927491	3300010360	Tropical Forest Soil	MSVLRPTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTAAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR*
Ga0126379_105411142	3300010366	Tropical Forest Soil	MRELPADDDVGISSVWRMGVGDLVTARAPDPVNRSQSEPDQVRLTFICAAITEVRSDRQTNLGGDYFFEQLPAPHDQIVILNRWGSYDILRVLHSVHEPETAVYVRWVARSTRRLRARLPHR*
Ga0137391_101335713	3300011270	Vadose Zone Soil	MGGPVSELRVADDFGISSVRRMGVGDLVTERAPDPVNRSRSEPDEVRQTLICARITEVRSDRQTNLGGDYFFEQLPAPNDQIVILNRWGSYDVMRVLHSAHEPETAVYVRWVAPR*
Ga0137391_114172491	3300011270	Vadose Zone Soil	AGKYRRNDPSSELFRNQDILRLGPSMSELRAIDDVSISSVREMGVGDLVTERARDPVNRSHSETGEVRQPLICARITEVQSGQQTNLGEDYYFEQLPTPNDQIVILNRRGSYDIMRVLYSAHGPETAVYVRWVARR*
Ga0137389_107166062	3300012096	Vadose Zone Soil	MGGPVSELRVADDFGISSVRRMGVGDLVTERAPDPVNRSRSEPDEVRQTLICARITEVRSDRQTNLGGGDYFFEQLPAPNDQIVILNRWGSYDVMRVLHSAHEPETAVYVRWVAPR*
Ga0137388_116822671	3300012189	Vadose Zone Soil	MGGPVSELRVADDFGISSVRRMGVGDLVTERAPDPVNRSRSEPDEVRQTLICARITEVRSDRQTNLGGDYFFEQLPAPNDQIVILNRWGSYDILRVLHSAHEPETAVYVRWVARG*
Ga0137399_105779792	3300012203	Vadose Zone Soil	MSELRAADDFSISSVRGLGVGDLVTERAPDPVHRSRSELGEVRQSLICARITEVRGGEKTNLDGDYFFEQLPAPNDQIVILNRRGSYDIMRVLHSAHAPETAVIVGERLKA*
Ga0137399_108066091	3300012203	Vadose Zone Soil	MSVLQPTDDFSVSSVGGMGVGDLVTERAPDPVDRSHSETDKPKQASIGARITEVQDGQQTDLGRDYHFEQLPAPNDQIVILNRRGSYDIMRVLYSAHEPETSVYVRWVARGDNIPKIAEVQISALHRRQAGTSPRAA*
Ga0137399_111183311	3300012203	Vadose Zone Soil	ISSVRRMGGADLVTERAPDPVNRSPSEPDEVRQTLICARITEVRSDRQTNLGGNYFFEQLPAPNDQIVILNRWGSYDTMRVLHSAHEPETAVYVRWVARG*
Ga0137396_105028512	3300012918	Vadose Zone Soil	MSELRAADDFSISSVRGLGVGDLVTERAPDPVHRSRSELGEVRQSLICARITEVRGGEKTNLDGDYFFEQLPAPNDQIVILNRRGSYDIMRVLHSAHAPE
Ga0137359_111373922	3300012923	Vadose Zone Soil	MSELRAADDFSISSVRGLGVGDLVTERAPDPVHRSRSELGEVRQSLICARITEVRGGEKTNLDGDYFFEQLPAPNNQIVILNRRGSYDIMRVLHSAHAPETAVYVRWVTRR*
Ga0137419_112019142	3300012925	Vadose Zone Soil	MLQPTVDFSVSSFGGMGVEDLVTERAPDLVDGSHSETDEVKQISICARITEVRDGQQTDLGGNYHFEQLPAPNNQIVILNRRGSYDIMRVLYLAHEPETSVYVRWVARR*
Ga0137416_117154402	3300012927	Vadose Zone Soil	NNPFPEAVRNQDNLARGPRMSELRAAEDFGISSVRRMGGADLVTERAPDPVNRSPSEPDEVRQTLICARITEVRSDRQTNLGGNYFFEQLPAPNDQIVILNRWGSYDTMRVLHSAHEPETAVYVRWVARG*
Ga0126369_130384651	3300012971	Tropical Forest Soil	GQLVRKLHEDHRGTIPCPKLFASKTTWRLGASMSMLRTTDDLSISCLRGMGVGDLVAERTPDSLNRSHSKTDAVKPTFICARITEMRDGRQIDLDGDYRFEQVPARNDQIFILSRRGLYDIMRVLYLTHEPELRVYVRWTARR*
Ga0137403_114457201	3300015264	Vadose Zone Soil	MSELIATDDFRISSVRGMSVGDLVTERVRDPVHRSLSETGEVRQTFICARITEVRGGEQTNFGGDYHFEQLPAPNDQIVILNRRGSYDIMRVWYSAQEPETTVYVRWVARR*
Ga0182041_101446833	3300016294	Soil	ASMSVLRTTDDLSISCLGGMGVGDLVTNRAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0182033_100778595	3300016319	Soil	GVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0182033_106777972	3300016319	Soil	VGDLVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLAHEPELRVYVRWAARR
Ga0182035_104811072	3300016341	Soil	LSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGVDYHFEQLPARNDQILILNRRGTNDIMRVLYLAHEPEARVYVRWAAHR
Ga0182035_116197681	3300016341	Soil	SISSVGGMGVGDLATERVPDPVNRSHSKMDAVKPPLICARIVKVRDGQKTDLGGDYFFEQLPIENDQILVLNRRGSYDIMRVLYSAREPEPAVYVRWAARR
Ga0182034_100304949	3300016371	Soil	MVGFAAQRLMKVEENTRGTIPSPELFATKTTWRLGAIMSVLRPTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQLLILNRRGSYDIMRVLYLAREPEARVYVRWPPVDK
Ga0182040_102163733	3300016387	Soil	DLSISSVGGMGVGDLATERVPDPVNRSHSKMDAVKPPLICARIVKVRDGQKTDLGGDYFFEQLPIENDQILVLNRRGSYDIMRVLYSAREPEPAVYVRWAARR
Ga0182037_111212282	3300016404	Soil	ASMNLLRPTDDLSIFSVGGTGFGDLVTERAADPVNRSHSETDAVKPTLICARITEVRDGQQIDLGGDYHFEQLPARNDQIIILNRRGSYDIMRVLYSAHESELVVYVRWAARR
Ga0210403_109859671	3300020580	Soil	MSELRAADDFSVSSVRGLGVGDLVTERAPDPVHRSRSETGEVQQSLICARITEVRSDRQTNLGGDYFFEQLPAPNDQIVILNRWGSYDTMRVLHS
Ga0210403_112467641	3300020580	Soil	MSVLWPPDDLSISSVGGMGVGDLATERVPDPVNRSHSKTDAVKPTLICARIVEVRDGQKTDLGGDYYFEQLPVENDQILILNRRGSYDIMRVLYSAREPEPAVYVRWRAVDKR
Ga0210406_113860141	3300021168	Soil	VWASGDLVTERAPDPVHRSRSETGDVWQSLICARITEVRGGEKTNLDGDYFFEQLPAPNDQIVILNRRGSYDIMRVLHSAHAPETAVYVRWVARSARRLRARLPHGEVSQCR
Ga0210387_104811313	3300021405	Soil	MSVLWPPDDLSISSVGGMGVGDLATERVPDPVNRSHSKTDAVKPTLICARIVEVRDGQKTDLGGDYYFEQLPVENDQILILNRRGSYDIMRVLYSAREPEPAVYVRWAGRR
Ga0210387_112096842	3300021405	Soil	MSELRADDDVGISSVRRMGVGDLVTARAPDRVNRSQSEPDQVRQTLICAAITEVRSDRQTNLGGDYFFEQLPSPHDQIVILNRWGSYDILRVLHSAHEPETAVYVRWVARSTRRLRARLPHREVSQCR
Ga0210387_115446072	3300021405	Soil	SLGGTGVGDLVTERAPDLANRSHSKKDTVKLKLICARISEVGDDRQIDLDGDYRFEQLPVRNDQIIILNQRGSYDITRVLYLAHGPDPVVYVRWAARR
Ga0126371_1002337212	3300021560	Tropical Forest Soil	MLRTTDDLSISCLGGMGVGDLVAERTPDSVNRSHSKTDAVKPTFICARITEMRDGRQIDLDGDYRFEQVPARNDQIFILSRRGLYDIMRVLYLTHEPELRVYVRWTARR
Ga0126371_102770552	3300021560	Tropical Forest Soil	MRELRADDDVGISSVWRMGVGDLVTARAPDPVNRSQSEPDQVRLTFICAAITEVRSDRQTNLGGDYFFEQLPAPHDQIVILNRWGSYDILRVLHSVHELETAVYVRWVARSTRRLRARLPHR
Ga0242662_101536292	3300022533	Soil	CMSELRAADDFSISSVRGVGDRVTERAPDPVHRSRSETGEVQQSLICARITEVRSDRQTNLGGDYFFEQLPAPNDQIVILNRWGSYDILRVLHSAHEPETAVYVRWVACSAWRLRARLPHGEVSQCR
Ga0209701_107381521	3300027862	Vadose Zone Soil	AVRNQDDLARGARMSELRVADDFGISSVRRMGVGDLVTERAPDPVNRSRSEPDEVRQTLICARITEVRSDRQTNLGGDYFFEQLPAPNDQIVILNRWGSYDVMRVLHSAHEPETAVYVRWVAPR
Ga0137415_101038172	3300028536	Vadose Zone Soil	MSELRAADDFSISSVRGLGVGDLVTERAPDPVHRSRSELGEVRQSLICARITEVRGGEKTNLDGDYFFEQLPAPNDQIVILNRWGSYDTMRVLHSAHEPETAVYVRWVARG
Ga0170824_1042788351	3300031231	Forest Soil	MSELRADDDVGISSVRRMGVGDLVTARAPDRVSRSQPEPDEVRQTLICAAITEVRSDRQTNLGGDYFFEQLPAPHDQIVILNRWGSYDILRVLHSVHEPETAVYV
Ga0170824_1071352831	3300031231	Forest Soil	QASTGGTILPLSCFVTRITLRWGPSMSELRAADDFSVSSVRGLGVGDLVTERAPDPVHRSRSETGEVQQSLICARITEVRSDRQTNLDGDYYFEQLPAPNDQIVILNRWGSYDIMRVLHSAHAPETAVYVRWVARR
Ga0170824_1250048873	3300031231	Forest Soil	VLWPTDVLSISSLGGTGVDDLETERAPDLAKRSHSKKDTVKPKLICARITEVRDDRQIDLDGDYRFEQLPVRNDQIIILNQRGSYDITRVLYLAHGPDPVVYVRWAARR
Ga0170818_1071738452	3300031474	Forest Soil	QSTRKVPDKQASTGGTILPLSCFVTRITLRWGPSMSELRAADDFSVSSVQGLGVGDLVTERAPDPVHRSRSETGEVQQSLICARITEVRSDRQTNLDGDYYFEQLPAPNDQIVILNRWGSYDIMRVLHSAHAPETAVYVRWVARR
Ga0318516_102293891	3300031543	Soil	MGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGVDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318541_100244541	3300031545	Soil	AADTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318541_102080921	3300031545	Soil	TGTIPCPKLFATKTTWRLGVSMSVLRTTDDLSVSCLRGMCVGDLVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLTHEPELRVYVRWAARR
Ga0318538_105506251	3300031546	Soil	MSVLWPTDDLSISSVGGMGVGDLATERVPDPVNRSHSKMDAVKPPLICARIVKVRDGQKTDLGGDYFFEQLPIENDHILVLNRRGSYDIMRVLYSAREPEPAVYVRWAARR
Ga0318573_102147853	3300031564	Soil	MGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318515_102907923	3300031572	Soil	GMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0310915_105309431	3300031573	Soil	MSVLWPTDDLSISSVGGMGVGDLATERVPDPVNRSHSKMDAVKPPLICARIVKVRDGQKTDLGGDYFFEQLPIENDQILVLNRRGSYDIMRVLYSAREPEPAVYVRWAARR
Ga0318555_102980252	3300031640	Soil	MSVLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAREPEARVYVRWAAR
Ga0318574_101717522	3300031680	Soil	MSVLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGVDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318572_103674153	3300031681	Soil	MGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYV
Ga0318560_103414842	3300031682	Soil	MSVLRTTGDLNISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0306917_100941705	3300031719	Soil	MSVLRTTGDLNISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0307469_106015541	3300031720	Hardwood Forest Soil	MSELRAADDFSVSSVRGLGVGDLVTERAPDPVHRSRSETGDVWQSLICARITEVRGGEKTNLDGDYFFEQLPAPNDQIVILNRRGSYDIMRVLHSAHAPETAVYVRWVARSARRLRARLPHGEVSQCR
Ga0318501_107473701	3300031736	Soil	TKTTWRWGASMNLLRPTDDLSIFSVGGTGFGDLVTERAADPVNRSHSETDAVKPTLICARITEVRDGQQIDLGGDYHFEQLPARNDQIIILNRRGSYDIMRVLYSAHESELVVYVRWAAR
Ga0306918_104658332	3300031744	Soil	MVGFAAQRLMKVEENTRGTIPSPELFATKTTWRWGASMNLLRPTDDLSIFSVGGTGFGDLVTERAADPVNRSHSETDAVKPTLICARITEVRDGQQIDLGGDYHFEQLPARNDQIIILNRRGSYDIMRVLYSAHESELVVYVRWAARR
Ga0318502_109324822	3300031747	Soil	SMSVLWPTDDLSISSVGGMGVGDLATERVPDPVNRSHSKMDAVKPPLICARIVKVRDGQKTDLGGDYFFEQLPIENDQILVLNRRGSYDIMRVLYSAREPEPAVYVRWAARR
Ga0318494_100480584	3300031751	Soil	VLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGVDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318509_103584202	3300031768	Soil	MSVLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318521_100726791	3300031770	Soil	GELGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318543_100253394	3300031777	Soil	VLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318508_10185132	3300031780	Soil	VLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318547_100511891	3300031781	Soil	SMSVLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318547_108013332	3300031781	Soil	MGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0318529_101413832	3300031792	Soil	MSVLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILNLNRRGSYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318503_101501991	3300031794	Soil	LVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGVDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318576_105531461	3300031796	Soil	GASMSVLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHDPEARVYVRWAARR
Ga0318523_100845104	3300031798	Soil	VLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318499_103619562	3300031832	Soil	MSVLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0310917_100940361	3300031833	Soil	SCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0318517_104960491	3300031835	Soil	TIPCPKLFASKTTWRLGASMSVLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGVDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318511_100347381	3300031845	Soil	TIPCPRLFASKTTWRLGASMSVLRTTDDLSIFCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318544_104408922	3300031880	Soil	MGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLY
Ga0318520_110396991	3300031897	Soil	RGTIPSPKLFATKTTWRLGAIMSVLRPTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQLLILNRRGSYDIMRVLYLAREPEARVYVRWAARR
Ga0306923_109690901	3300031910	Soil	SPELFATKTTWRWGASMNLLRPTDDLSIFSVGGTGFGDLVTERAADPVNRSHSETDAVKPTLICARITEVRDGQQIDLGGDYHFEQLPARNDQIIILNRRGSYDIMRVLYSAHESELVVYVRWAARR
Ga0310912_104727371	3300031941	Soil	LSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0310916_108095371	3300031942	Soil	TTWRLGASMSVLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0310913_104722713	3300031945	Soil	GMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0310910_109797491	3300031946	Soil	GGMGVGDLATERVPDPVNRSHSKMDAVKPPLICARIVKVRDGQKTDLGGDYFFEQLPIENDHILVLNRRGSYDIMRVLYSAREPEPAVYVRWAARR
Ga0310909_103473942	3300031947	Soil	SCLRGMCVGDLVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLAHEPELRVYVRWAARR
Ga0306926_103137054	3300031954	Soil	DLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0306926_109018751	3300031954	Soil	TKTTSRLGVSMSVLRTTDDLSVSCLRGMCVGDLVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLAHEPELRVYVRWAAR
Ga0306922_100890406	3300032001	Soil	VLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0306922_117142802	3300032001	Soil	MCVGDLVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLAHEPELR
Ga0310911_100265012	3300032035	Soil	VLRTTGDLNISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318559_100905283	3300032039	Soil	VLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARINEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318549_100155812	3300032041	Soil	MSVLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318556_101469553	3300032043	Soil	SVLRPTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTAAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318506_100306332	3300032052	Soil	VLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGVDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318570_101314021	3300032054	Soil	DDLSVSCLRGMCVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318513_100467912	3300032065	Soil	VLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDCLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318514_104533711	3300032066	Soil	MSVLRTTDGLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAH
Ga0306924_101552285	3300032076	Soil	VLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGVDYHFEQLPARNDQILILNRRGSYDIMRVLYLAHEPEARVYVRWAARR
Ga0306924_106287012	3300032076	Soil	MCVGDLVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLAHEPELRVYVRWAARR
Ga0318518_103288172	3300032090	Soil	LSIFCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDGRQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0318540_103519891	3300032094	Soil	GASMSVLRTTDDLSISCLGGMGVGDLVTERAPDPVNRSHSKTDAVKPTLICARITEVRDCLQIDLGGDYHFEQLPARNDQILILNRRGTYDIMRVLYLAHEPEARVYVRWAAHR
Ga0307470_102914402	3300032174	Hardwood Forest Soil	MSELRAADDFSISSVRGLGVGDLVTERAPDPVHRSRSETGDVWQSLICARITEVRGGEKTNLDGDYFLEQLPAPNDQIVILNRRGSYDIMRVLHSAHAPETAVYVRWVARSARRLRARLPHREVSQCR
Ga0307471_1026912602	3300032180	Hardwood Forest Soil	MSVLQPTDDFRVSSVGGMGGGDLVTERAPDPVDRSHSETDKSKQASIGARITEVRDGQQTDLGRDYHFEQLPAPNDQIVILNRRGSYDIMRVLYSTREPEASVYVRWVARGDNIPKIAEVQISALHRRQAGTSPRAA
Ga0306920_1008777513	3300032261	Soil	LVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLAHEPELRVYVRWAARR
Ga0310914_104137811	3300033289	Soil	DDLSVSCLRGMCVGDLVTERAPDPVNRSHSKTDAVKPTLICAGITEIRDGRQIDLDGDYHFEQLPARNDQILILNRRGLYDIMRVLYLAHEPELRVYVRWAARR
Ga0318519_103166101	3300033290	Soil	CWRRAAGADLLREMVGFAAQRLMKVEENTRGTIPSPELFATKTTWRWGASMNLLRPTDDLSIFSVGGTGFGDLVTERAADPVNRSHSETDAVKPTLICARITEVRDGQQIDLGGDYHFEQLPARNDQIIILNRRGSYDIMRVLYSAHESELVVYVRWAARR
Ga0318519_103910882	3300033290	Soil	MSVLWPTDDLSISSVGGMGVGDLATERVPDPVNRSHSKMDAVKPPLICARIVKVRDGQKTDLGGDYFFEQLPIENDHILVLNRRGSYDIMRVLYSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093162

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences