NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F093156

Metagenome / Metatranscriptome Family F093156

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F093156
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 116 residues
Representative Sequence MHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Number of Associated Samples 90
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.42 %
% of genes near scaffold ends (potentially truncated) 40.57 %
% of genes from short scaffolds (< 2000 bps) 92.45 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (75.472 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.415 % of family members)
Environment Ontology (ENVO) Unclassified
(31.132 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(61.321 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.59%    β-sheet: 0.00%    Coil/Unstructured: 51.41%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF13467RHH_4 8.49
PF01068DNA_ligase_A_M 2.83
PF04325DUF465 1.89
PF03401TctC 0.94
PF13545HTH_Crp_2 0.94
PF00149Metallophos 0.94
PF10137TIR-like 0.94
PF02586SRAP 0.94
PF16242Pyrid_ox_like 0.94
PF13011LZ_Tnp_IS481 0.94
PF05908Gamma_PGA_hydro 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 2.83
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 2.83
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 0.94
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.94
COG4195Phage-related replication protein YjqB, UPF0714/DUF867 familyMobilome: prophages, transposons [X] 0.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A75.47 %
All OrganismsrootAll Organisms24.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig208977Not Available510Open in IMG/M
3300004081|Ga0063454_100672473Not Available773Open in IMG/M
3300004153|Ga0063455_100834336Not Available643Open in IMG/M
3300004463|Ga0063356_104853085Not Available578Open in IMG/M
3300005334|Ga0068869_101489322All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas chlororaphis group → Pseudomonas chlororaphis601Open in IMG/M
3300005335|Ga0070666_11104243Not Available590Open in IMG/M
3300005341|Ga0070691_10307786Not Available867Open in IMG/M
3300005347|Ga0070668_100198903All Organisms → cellular organisms → Bacteria1645Open in IMG/M
3300005355|Ga0070671_100903536Not Available771Open in IMG/M
3300005356|Ga0070674_100778250Not Available824Open in IMG/M
3300005439|Ga0070711_101296843Not Available632Open in IMG/M
3300005441|Ga0070700_101991854Not Available504Open in IMG/M
3300005456|Ga0070678_101765900Not Available583Open in IMG/M
3300005539|Ga0068853_100194477All Organisms → cellular organisms → Bacteria1844Open in IMG/M
3300005546|Ga0070696_101569868Not Available565Open in IMG/M
3300005577|Ga0068857_102067963Not Available559Open in IMG/M
3300005578|Ga0068854_100198160All Organisms → cellular organisms → Bacteria1577Open in IMG/M
3300005614|Ga0068856_100353643Not Available1488Open in IMG/M
3300005842|Ga0068858_101492094Not Available667Open in IMG/M
3300006038|Ga0075365_10171555All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1514Open in IMG/M
3300006042|Ga0075368_10390526Not Available610Open in IMG/M
3300006057|Ga0075026_100189411Not Available1076Open in IMG/M
3300009094|Ga0111539_13545824Not Available500Open in IMG/M
3300009101|Ga0105247_10010711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5536Open in IMG/M
3300009156|Ga0111538_12785162All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Reyranellaceae → Reyranella → Reyranella massiliensis612Open in IMG/M
3300009177|Ga0105248_12788568Not Available557Open in IMG/M
3300010371|Ga0134125_10213563All Organisms → cellular organisms → Bacteria2146Open in IMG/M
3300010373|Ga0134128_11028177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii910Open in IMG/M
3300011332|Ga0126317_10380053Not Available704Open in IMG/M
3300012212|Ga0150985_107541654All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales837Open in IMG/M
3300012212|Ga0150985_108295850Not Available1059Open in IMG/M
3300012212|Ga0150985_114108053Not Available649Open in IMG/M
3300012212|Ga0150985_122531593Not Available646Open in IMG/M
3300012469|Ga0150984_103352607Not Available1201Open in IMG/M
3300012469|Ga0150984_104534991Not Available559Open in IMG/M
3300012469|Ga0150984_105960172Not Available555Open in IMG/M
3300012469|Ga0150984_106070211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1188Open in IMG/M
3300012469|Ga0150984_109875692All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria707Open in IMG/M
3300012469|Ga0150984_122430339All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales917Open in IMG/M
3300012469|Ga0150984_123040536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria780Open in IMG/M
3300012938|Ga0162651_100002796All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Gracilimonas → Gracilimonas tropica1699Open in IMG/M
3300012951|Ga0164300_10004491All Organisms → cellular organisms → Bacteria3884Open in IMG/M
3300012955|Ga0164298_10003992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5085Open in IMG/M
3300012957|Ga0164303_10074748Not Available1595Open in IMG/M
3300012985|Ga0164308_11270372Not Available667Open in IMG/M
3300012986|Ga0164304_10232094Not Available1226Open in IMG/M
3300013296|Ga0157374_11888547Not Available623Open in IMG/M
3300013306|Ga0163162_13475650Not Available501Open in IMG/M
3300013308|Ga0157375_10337926Not Available1671Open in IMG/M
3300014326|Ga0157380_10312885Not Available1452Open in IMG/M
3300014745|Ga0157377_10095867Not Available1759Open in IMG/M
3300014968|Ga0157379_11438130Not Available669Open in IMG/M
3300014969|Ga0157376_12993031Not Available512Open in IMG/M
3300015201|Ga0173478_10259514Not Available765Open in IMG/M
3300015371|Ga0132258_10163983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5347Open in IMG/M
3300015372|Ga0132256_100076423Not Available3189Open in IMG/M
3300015372|Ga0132256_101701175Not Available740Open in IMG/M
3300015373|Ga0132257_102385562Not Available686Open in IMG/M
3300015374|Ga0132255_102283288Not Available825Open in IMG/M
3300018051|Ga0184620_10172237Not Available709Open in IMG/M
3300018072|Ga0184635_10347219Not Available571Open in IMG/M
3300018074|Ga0184640_10306729Not Available721Open in IMG/M
3300018469|Ga0190270_10219086Not Available1626Open in IMG/M
3300018469|Ga0190270_10333831Not Available1369Open in IMG/M
3300018469|Ga0190270_11152593Not Available811Open in IMG/M
3300018476|Ga0190274_10799750All Organisms → cellular organisms → Bacteria → Proteobacteria1000Open in IMG/M
3300019356|Ga0173481_10211402Not Available848Open in IMG/M
3300021082|Ga0210380_10195075All Organisms → cellular organisms → Bacteria → Proteobacteria915Open in IMG/M
3300022756|Ga0222622_10916168Not Available643Open in IMG/M
3300025900|Ga0207710_10072907Not Available1578Open in IMG/M
3300025904|Ga0207647_10054662All Organisms → cellular organisms → Bacteria → Proteobacteria2456Open in IMG/M
3300025915|Ga0207693_10864936Not Available695Open in IMG/M
3300025916|Ga0207663_10531047Not Available917Open in IMG/M
3300025927|Ga0207687_11037140Not Available704Open in IMG/M
3300025928|Ga0207700_10838642Not Available822Open in IMG/M
3300025930|Ga0207701_10955226Not Available716Open in IMG/M
3300025932|Ga0207690_10381032All Organisms → cellular organisms → Bacteria1121Open in IMG/M
3300025938|Ga0207704_11298789Not Available622Open in IMG/M
3300025942|Ga0207689_10958294Not Available722Open in IMG/M
3300025944|Ga0207661_11707633Not Available575Open in IMG/M
3300025972|Ga0207668_10352571All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1231Open in IMG/M
3300026067|Ga0207678_10010626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8088Open in IMG/M
3300026067|Ga0207678_10634104All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300026089|Ga0207648_11563298Not Available620Open in IMG/M
3300026118|Ga0207675_101796313Not Available632Open in IMG/M
3300028587|Ga0247828_10961986Not Available555Open in IMG/M
3300028708|Ga0307295_10149633Not Available648Open in IMG/M
3300028710|Ga0307322_10128234Not Available666Open in IMG/M
3300028787|Ga0307323_10110987Not Available985Open in IMG/M
3300028814|Ga0307302_10575339Not Available560Open in IMG/M
3300028819|Ga0307296_10075518Not Available1793Open in IMG/M
3300028824|Ga0307310_10224712Not Available894Open in IMG/M
3300028828|Ga0307312_10872699Not Available596Open in IMG/M
3300028876|Ga0307286_10422847Not Available501Open in IMG/M
3300028880|Ga0307300_10172416Not Available690Open in IMG/M
3300031058|Ga0308189_10202326Not Available720Open in IMG/M
3300031058|Ga0308189_10357070Not Available590Open in IMG/M
3300031091|Ga0308201_10340056Not Available547Open in IMG/M
3300031092|Ga0308204_10127301Not Available732Open in IMG/M
3300031093|Ga0308197_10222283Not Available655Open in IMG/M
3300031093|Ga0308197_10478028Not Available506Open in IMG/M
3300031093|Ga0308197_10487357Not Available502Open in IMG/M
3300031099|Ga0308181_1090189Not Available648Open in IMG/M
3300031231|Ga0170824_102489175All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1145Open in IMG/M
3300031740|Ga0307468_102029766Not Available552Open in IMG/M
3300033551|Ga0247830_11686004Not Available508Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.60%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere6.60%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.72%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere3.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.83%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.83%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.83%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.89%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.89%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.89%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.94%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.94%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.94%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.94%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.94%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.94%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031099Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_165511202124908045SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEADISDLENELDHGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL
Ga0063454_10067247313300004081SoilMHLRPDPDFQDFALDCIRLSNQEKSARLRHRLLTLAREWMHAAMHQRGAEIHRESTERMDANSGEPWSDMDISDLTNEFAHGRTVAETASFLCRDEDQVRQKAMELGLFERP
Ga0063455_10083433613300004153SoilMHLRPDPDFQDFALDCIRLSNQEKSPRLRHRLLTLAREWMHAAMHQRGAEIHRESTERMDANSGEPWSDMDISDLTNEFANGRTVAETASFLCRDEDQVRQKAMELGLFERPGKHVRVVL
Ga0063356_10485308523300004463Arabidopsis Thaliana RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDKNSGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEVRQKAKELGLVEK
Ga0068869_10148932213300005334Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEADISDLENELDHGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL*
Ga0070666_1110424313300005335Switchgrass RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG*
Ga0070691_1030778613300005341Corn, Switchgrass And Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFFCRDEDEVRQK
Ga0070668_10019890313300005347Switchgrass RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR*
Ga0070671_10090353613300005355Switchgrass RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDENSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR*
Ga0070674_10077825013300005356Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDE
Ga0070711_10129684313300005439Corn, Switchgrass And Miscanthus RhizosphereMHLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR*
Ga0070700_10199185413300005441Corn, Switchgrass And Miscanthus RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSHSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQS
Ga0070678_10176590023300005456Miscanthus RhizospherePDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG*
Ga0068853_10019447713300005539Corn RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR*
Ga0070696_10156986813300005546Corn, Switchgrass And Miscanthus RhizosphereLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDENSGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEVRQKAKELGSKSTSAWFSRTHSSRG*
Ga0068857_10206796313300005577Corn RhizosphereRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG*
Ga0068854_10019816013300005578Corn RhizospherePDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIQQESTEPMDANSGPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR*
Ga0068856_10035364313300005614Corn RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG*
Ga0068858_10149209413300005842Switchgrass RhizosphereLSPDPDFEEFALDCIRLSNQGKSPILRGKLLTLAREWMHAAMHQQGAEIHQESTEPMDENSGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEVRQKAKELGLVEKHVRVVL*
Ga0075365_1017155533300006038Populus EndosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDENSRPSPTGAADVVGNCADCRTGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEVRQKAKELGLVEKHVRVVL*
Ga0075368_1039052613300006042Populus EndosphereMRVRPDPDFQEFALDCIRLSKQEKSPRLRHRLLMLAREWMHAAMHQQGTETHHESTERMDANSGEPWSEMDITVLTNEIAHGRTMAETAGFLCRNEDEVRQKAEELELVERPGKHARVVL
Ga0075026_10018941113300006057WatershedsMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLVEKHVRVVL*
Ga0111539_1354582413300009094Populus RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQRAEIHRESTEPMDANSGEPWSEMDISDLTNVLAHGRTMAETASFLCRDEDEV
Ga0105247_1001071163300009101Switchgrass RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTKPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG*
Ga0111538_1278516213300009156Populus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPGSEADISDLENELDHSQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVAYCKSGMRSSLLWGAATIAGGRSLEDVLGAAQRTGQNLEPVGDTMM
Ga0105248_1278856813300009177Switchgrass RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGAPWSEKDIADLTHSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEA
Ga0134125_1021356313300010371Terrestrial SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIQQESTEPMDANSGPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR*
Ga0134128_1102817723300010373Terrestrial SoilDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQSAEIHRESTERMDANSGEPWSEMDISDLTNEIAHDRTMAEIASFLCRAKDEVRQKAKELGLTPVLKRP*
Ga0126317_1038005313300011332SoilRDMHSSPDPDFEEFALDCIRLSNQERSPILRRKLLTLAREWMHAAMHRRGVEMHRESTEPMNANSGEPWPEMDISDLRNELAHGRTIAETASFLCRDEDEVRQKAKELGLLDLRLRK*
Ga0150985_10754165413300012212Avena Fatua RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLTSELTRGQTFAETASFLCREEDEVRQKAKELGLIEQTDKRIR*
Ga0150985_10829585013300012212Avena Fatua RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDENSGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEVRQKAKELGLVEKHVRVVL*
Ga0150985_11410805313300012212Avena Fatua RhizosphereRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEADISDLKNEIDHGRTIAETASFLCRDVYEVRAKMKELRLTEQPSKRRVVL*
Ga0150985_12253159323300012212Avena Fatua RhizosphereLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNEIAHGRTVAETASFLCRDEDEVRQKAKELNCQESASARTDGQTR*
Ga0150984_10335260713300012469Avena Fatua RhizosphereMHLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEADISDLKNEIDHGRTIAETASFLCRDVYEVRAKMKELRLTEQPSKRRVVL*
Ga0150984_10453499113300012469Avena Fatua RhizosphereMHLRPDPDFQDFALDCIRLSNQEKSARLRHRLLTLAREWMHAAMHQRGAEIHRESTERMDANSGEPWSDMDISDLTNEFAHGRTVAETASFLCRDEDQVRQKAMELG
Ga0150984_10596017213300012469Avena Fatua RhizosphereMRPDADFQEFALDCIRLSNQEKSPTLRHKLLMLAREWMHAAMHQHGAEIHRKSTQRMDANSGEPWSEMDISDLTNEIAHGRTMAETASFLCRGEDEVRQKAMELGLVTH*
Ga0150984_10607021113300012469Avena Fatua RhizosphereLDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDENSGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEVRQKAKELGLVEKHVRVVL*
Ga0150984_10987569223300012469Avena Fatua RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTKPMDANSGEPWSEADISDLENELDHGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL*
Ga0150984_12243033923300012469Avena Fatua RhizosphereLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLTSELTRGQTFAETASFLCREEDEVRQKAKELGLIEQTDKRIR*
Ga0150984_12304053623300012469Avena Fatua RhizosphereQEFALDCIRLSNQEKSPKLRHRLLMLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSDMDISDLTNEIAHGRTMAETASFLCRDEDEVRQKAMELGLVAQSPSRLSSG*
Ga0162651_10000279623300012938SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQSAEIHRESTERRTQIQANPGPMSMSATQERTRHSRTIAGNASFLCRDVYEVRAKGT*
Ga0164300_1000449173300012951SoilMHLSPDPDFQEFALDSIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIQQESTEPMDANSGPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR*
Ga0164298_1000399213300012955SoilMHLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEADISDLKNEIDHGRTIAETASFLCRDVYEVRAKMKEL
Ga0164303_1007474823300012957SoilMRLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEADISDLKNEIDHGRTIAETASFLCRDVYEVRAKMKELRLTEQPSKRRVVL*
Ga0164308_1127037213300012985SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR*
Ga0164304_1023209413300012986SoilMHLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEADISDLKNEIDHGRTIAETASFLCRDVYEVRAKMKELRLTEQP
Ga0157374_1188854713300013296Miscanthus RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERS
Ga0163162_1347565013300013306Switchgrass RhizosphereNQEGRDMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHDAMHQQGAEIHQESTEPMDANSGEPWSEADISDLENELDHGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL*
Ga0157375_1033792633300013308Miscanthus RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSHSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG*
Ga0157380_1031288513300014326Switchgrass RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLA
Ga0157377_1009586713300014745Miscanthus RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAKAERSGPSMKG*
Ga0157379_1143813013300014968Switchgrass RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIQQESTEPMDANSGPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLVEKHVRVVL*
Ga0157376_1299303113300014969Miscanthus RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDFTNELAHGRTMAETASFLCRDEDEDEVR
Ga0173478_1025951413300015201SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEADISDLENELDHGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL*
Ga0132258_1016398373300015371Arabidopsis RhizosphereMRLRPDPDFEEFALDCIGLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEADISDLKNEIDHGRTIAETASFLCRDVYEVRAKMKELRLTEQPSKRRVVL*
Ga0132256_10007642313300015372Arabidopsis RhizosphereMRLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEADISDLKSEIEHGRSVAETVSFLCRDEDEVRAKMKAD*
Ga0132256_10170117513300015372Arabidopsis RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRGKLLTLAREWMHAAMHQQGAETHRESTERMDANSGEPWSEMDISDLTNEIAHDRTMAEIASFLCRDEDEVRQKARELGMVDGSRKEKPRGKRGAVEG*
Ga0132257_10238556213300015373Arabidopsis RhizosphereLDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERTDANSGEPWSEMDISDLTNEIAHDRTMAEIASFLCRDEDEVRQKARELGMVDGSRKDKPRGKRGAVDG*
Ga0132255_10228328813300015374Arabidopsis RhizosphereMHLSPDPDFEEFALDCIRPSNQEKSPILRGKLLTLAREWMHAAMHQQCAEIHRESTEPMDENSGEPWSEMDISDLTNELAHGRKMANRACLLCRNDDEVRQ
Ga0184620_1017223713300018051Groundwater SedimentMHLSPDPDFEEFALDCIRLSNQEKSPILRGKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTHSLDYGDTFAQTASFLCRDENEVRQKAKELGLVEQHVRVVL
Ga0184635_1034721913300018072Groundwater SedimentEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELARGRTMAQTASFLCRDQDQARQKAKE
Ga0184640_1030672913300018074Groundwater SedimentMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0190270_1021908623300018469SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRGKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTIAETAGFLCRDEDEVRQKVKELGLVDLRLRK
Ga0190270_1033383123300018469SoilMHLRPDPDFQDFALDCIRLSNQEKSPRLRHRLLTLAREWMHAAMHQRGAEIHRESTERMDANSGEPWSDMDISDLTNEFAHGRTVAETASFLCRDEDQVRQKAMERGLFERPGKHVRVVL
Ga0190270_1115259313300018469SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGTEIHQESTEPMDANSGEPWSEMDINDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0190274_1079975023300018476SoilMHVRPDPDFEEFALDCIRLSNQEKSPRLRQSLLMLAREWMQAAMHQRGAEIDRKSTERMDANSGELWSDMDISDLTNEIANGRTVAETASFLCRDEDEVRRKAMELGLVERPSKHVRVVL
Ga0173481_1021140213300019356SoilMHLSPDPDFEELALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIQQESTEPMDENSRPSPTGAADVVGNCADCRTGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEDEVRQKAKELGLLRSPVR
Ga0210380_1019507513300021082Groundwater SedimentMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLTREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0222622_1091616813300022756Groundwater SedimentMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPV
Ga0207710_1007290713300025900Switchgrass RhizosphereMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG
Ga0207647_1005466253300025904Corn RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIQQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0207693_1086493623300025915Corn, Switchgrass And Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSPSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG
Ga0207663_1053104723300025916Corn, Switchgrass And Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEV
Ga0207687_1103714013300025927Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEADISDLENELDDGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL
Ga0207700_1083864223300025928Corn, Switchgrass And Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSHSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG
Ga0207701_1095522613300025930Corn, Switchgrass And Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRNLLTLAREWMHAAMHQQSAEIHRESTEPMDANSGEPWSEMDISDLSHSLDYGDTFAQTASFLCRDEDEVRQKAKELGLAERARKQSPAEAERSGPSMKG
Ga0207690_1038103223300025932Corn RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR
Ga0207704_1129878913300025938Miscanthus RhizosphereMHLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQSAEIHRESTERMDANSGEPWSEMDIVDLTRSLDSGDTFAKAASFLCRDEDEVR
Ga0207689_1095829413300025942Miscanthus RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR
Ga0207661_1170763313300025944Corn RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEADISDLENELDHGQTIAQIASFLYRDDDEVREKMKELGLAERP
Ga0207668_1035257123300025972Switchgrass RhizosphereCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDVNSGEPWSEADISDLENELDDGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL
Ga0207678_1001062623300026067Corn RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEADISDLENELDHGQTIAQIASFLYRDDDEVREKMKELGLAERPGRVVL
Ga0207678_1063410413300026067Corn RhizosphereGRDMHLSPDPDFEEFALECIRLSNQEKSPILRRNLLTLAREWMHAAMHQQGAEIHQESTEPMDENSRPSPTGAADVVGNCADCRTGEPWSEMDISDLTNELAHGRKMAETASFLCRDEDEVRQKAKELGSKSTSAWFSRFELSGGCPFGQDRKR
Ga0207648_1156329813300026089Miscanthus RhizosphereLSPDPDFEEFALDCIRLSNQGKSPILRGKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEDEVRQKAKELGLLRSPVR
Ga0207675_10179631313300026118Switchgrass RhizosphereMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0247828_1096198613300028587SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGTKIHQESIEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFFCRDEDEVRQKAKELGLLRSPVR
Ga0307295_1014963323300028708SoilMHLRPDPDFQDFALDCIRLSNQEKSPRLRHRLLTLAREWMHAAMHQRGAEIHRESTERMDANSGEPWSDMDISDLTNEFAHGRTVAETASFLCRDEDQVRQKAMELGLFERPGKHVRVVL
Ga0307322_1012823413300028710SoilMHLRPDPDFQDFALDCIRLSNQEKSPRLRHRLLTLAREWMHAAMHQRGAEIHRESTERMDANSGEPWSDMDISDLTNEFAHGRTVAETASFLCRDEDQVRQKAMELGLFERPGKHVRVFL
Ga0307323_1011098713300028787SoilMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDVNSDEPWSEMDISDLRNEFAHGRTMAETASFLCRDEDEVRQKAKELGLVEQHVRGVL
Ga0307302_1057533923300028814SoilMHLSPDPDFEEFALDFIRLSNQEKSTLLRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDVNSDEPWSEMDISDLRNEFAHGRTMAETASFLCRDEDEVRQKAKELGLVEQHVRGVL
Ga0307296_1007551813300028819SoilMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0307310_1022471223300028824SoilMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0307312_1087269913300028828SoilGSRMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRPMAETASFLCRDEDEVRAKMKELRLTEQPGKRR
Ga0307286_1042284713300028876SoilLSNQEKFPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDVNSDEPWSEMDISDLRNEFAHGRTMAETASFLCRDEDEVRQKAKELGLVEQHVRGVL
Ga0307300_1017241613300028880SoilARKGRVMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0308189_1020232613300031058SoilMHLRPDPDFEEFALDCIRLSNQEKFPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDVNSDEPWSEMDISDLRNEFAHGRTMAETASFLCRDEDEVRQKAKELGLVEQHVRGVL
Ga0308189_1035707013300031058SoilLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEMDISDLTNEIAHDRTMAEIASFLCRDEDEVRQKAKELGLVEQHVRVSPPPPRSCT
Ga0308201_1034005613300031091SoilLDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERTDANSGEPWSEMDISDLTNEIAHDRTMAEIASFLCRDEDEVRQKARELGMVDGSRKEKPREKRGAVEE
Ga0308204_1012730113300031092SoilVDMHLRPDPDFEEFALDCIRLSNQEKFPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDVNSDEPWSEMDISDLRNEFAHGRTMAETASFLCRDEDEVRQKAKELGLVEQHVRGVL
Ga0308197_1022228313300031093SoilMHLSPDPDFEEFALDCIRLSNQKKSPILRRKLLTLAREWMHAAMHQQGAEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0308197_1047802813300031093SoilMHLRPDPDFQDFALDCIRLSNQEKSPRLRYRLLTLAREWMHAAMHQRGAEIHRESTERMDANSGEPWSDMDISDLTNEFAHGRTVAETASFLCRDEDQVRQKAMELGLFERPGKHVRVFL
Ga0308197_1048735723300031093SoilMHLRPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPIDVNSDEPWSEMDISDLRNEFAHGRTMAETASFLCRDEDEVRQKAKELGLIEQHVRGVL
Ga0308181_109018913300031099SoilMHLRPDPDFEEFALDCIRLSNEEKSPTLRRKLLTLAREWMHAAMHQQGAEIHRESTERMDANSGEPWSEMDISDLTNEIAHDRTMAEIASFLCRDEDEVRQKAKELDFVEQHIRVVL
Ga0170824_10248917513300031231Forest SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGAEIQQESTEPMDANSGPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR
Ga0307468_10202976613300031740Hardwood Forest SoilMHLSPDPDFEEFALDCIRLSNQEKFPILRRKLLTLAREWMHAAMHQQGAEIHRESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDLDEVRQKGPRKEKPRRSGA
Ga0247830_1168600413300033551SoilMHLSPDPDFEEFALDCIRLSNQEKSPILRRKLLTLAREWMHAAMHQQGTEIHQESTEPMDANSGEPWSEMDISDLTNELAHGRTMAETASFLCRDEDEVRQKAKELGLLRSPVR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.