Metagenome / Metatranscriptome Family F093105

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F093105
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	112 residues
Representative Sequence	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRQARPLPPRPARMQQTSGALPRAS
Number of Associated Samples	55
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.64 %
% of genes near scaffold ends (potentially truncated)	34.91 %
% of genes from short scaffolds (< 2000 bps)	73.58 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.509 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (40.566 % of family members)
Environment Ontology (ENVO)	Unclassified (59.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.62% β-sheet: 15.83% Coil/Unstructured: 57.55%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13458	Peripla_BP_6	32.08
PF05995	CDO_I	13.21
PF13520	AA_permease_2	5.66
PF00266	Aminotran_5	3.77
PF02653	BPD_transp_2	1.89
PF13374	TPR_10	0.94
PF11854	MtrB_PioB	0.94
PF03454	MoeA_C	0.94
PF00285	Citrate_synt	0.94
PF00005	ABC_tran	0.94
PF07238	PilZ	0.94
PF03453	MoeA_N	0.94
PF12399	BCA_ABC_TP_C	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	13.21
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	1.89
COG0372	Citrate synthase	Energy production and conversion [C]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.51 %
Unclassified	root	N/A	8.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.55 %
Unclassified	root	N/A	8.49 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.23 %
Unclassified	root	N/A	8.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.55 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.23 %
Unclassified	root	N/A	8.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.55 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.23 %
Unclassified	root	N/A	8.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.55 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.23 %
Unclassified	root	N/A	8.49 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	4.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.23 %
Unclassified	root	N/A	8.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10086360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1447	Open in IMG/M
3300004092\|Ga0062389_100526530	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300004609\|Ga0068958_1029117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300006059\|Ga0075017_100952971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300009520\|Ga0116214_1363755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300009522\|Ga0116218_1007610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4920	Open in IMG/M
3300009698\|Ga0116216_10722767	Not Available	598	Open in IMG/M
3300009839\|Ga0116223_10297452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300009839\|Ga0116223_10644536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300010379\|Ga0136449_100983459	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300010379\|Ga0136449_101891656	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300010379\|Ga0136449_102038839	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300010379\|Ga0136449_103489886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300011076\|Ga0138574_1090551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300011085\|Ga0138581_1101763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300011090\|Ga0138579_1116243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300016270\|Ga0182036_11202631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300017821\|Ga0187812_1062223	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300017821\|Ga0187812_1108467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300017823\|Ga0187818_10299156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300017932\|Ga0187814_10030211	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300017932\|Ga0187814_10152023	Not Available	863	Open in IMG/M
3300017933\|Ga0187801_10104300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300017934\|Ga0187803_10012071	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3457	Open in IMG/M
3300017934\|Ga0187803_10044488	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300017934\|Ga0187803_10174842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300017939\|Ga0187775_10020191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1815	Open in IMG/M
3300017939\|Ga0187775_10343357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300017943\|Ga0187819_10191200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300017943\|Ga0187819_10205358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300017943\|Ga0187819_10383850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300017943\|Ga0187819_10386062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300017955\|Ga0187817_10151140	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300017955\|Ga0187817_10240925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300017955\|Ga0187817_10374643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300017959\|Ga0187779_10381009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300017961\|Ga0187778_10012535	All Organisms → cellular organisms → Bacteria	5258	Open in IMG/M
3300017961\|Ga0187778_10035326	All Organisms → cellular organisms → Bacteria	3056	Open in IMG/M
3300017961\|Ga0187778_10048544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2593	Open in IMG/M
3300017966\|Ga0187776_10005485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6627	Open in IMG/M
3300017966\|Ga0187776_10645477	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300017966\|Ga0187776_10710657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300017966\|Ga0187776_11062324	Not Available	599	Open in IMG/M
3300017970\|Ga0187783_10106953	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300017972\|Ga0187781_10019527	All Organisms → cellular organisms → Bacteria → Proteobacteria	4738	Open in IMG/M
3300017972\|Ga0187781_10088615	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300017972\|Ga0187781_10174996	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300017972\|Ga0187781_10199879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300017972\|Ga0187781_10211702	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300017972\|Ga0187781_10630863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300017973\|Ga0187780_10097079	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300017973\|Ga0187780_10985382	Not Available	614	Open in IMG/M
3300017975\|Ga0187782_10002968	All Organisms → cellular organisms → Bacteria	12601	Open in IMG/M
3300017975\|Ga0187782_10009637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7123	Open in IMG/M
3300017975\|Ga0187782_10172198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1616	Open in IMG/M
3300017975\|Ga0187782_11309986	Not Available	568	Open in IMG/M
3300017975\|Ga0187782_11668616	Not Available	504	Open in IMG/M
3300017999\|Ga0187767_10242840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300018001\|Ga0187815_10195325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300018001\|Ga0187815_10258889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300018007\|Ga0187805_10209159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300018012\|Ga0187810_10145359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300018012\|Ga0187810_10296760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300018058\|Ga0187766_10034190	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300018062\|Ga0187784_10145994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1932	Open in IMG/M
3300018064\|Ga0187773_10237892	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300018085\|Ga0187772_10065429	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300018085\|Ga0187772_11156336	Not Available	569	Open in IMG/M
3300018086\|Ga0187769_10024525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4039	Open in IMG/M
3300018086\|Ga0187769_10352433	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300018086\|Ga0187769_10432570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300018086\|Ga0187769_10478041	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300018086\|Ga0187769_10829284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300018088\|Ga0187771_10037669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3715	Open in IMG/M
3300018088\|Ga0187771_10301180	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300018088\|Ga0187771_10930520	Not Available	737	Open in IMG/M
3300018088\|Ga0187771_11212741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300018090\|Ga0187770_10052462	All Organisms → cellular organisms → Bacteria	2940	Open in IMG/M
3300018090\|Ga0187770_10496420	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300018090\|Ga0187770_10766188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300018090\|Ga0187770_11326140	Not Available	584	Open in IMG/M
3300019275\|Ga0187798_1333610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300027641\|Ga0208827_1014766	All Organisms → cellular organisms → Bacteria	2955	Open in IMG/M
3300027696\|Ga0208696_1038439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300027854\|Ga0209517_10181020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1318	Open in IMG/M
3300027854\|Ga0209517_10320160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300027905\|Ga0209415_10287242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1434	Open in IMG/M
3300030494\|Ga0310037_10332114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300030659\|Ga0316363_10041848	All Organisms → cellular organisms → Bacteria → Acidobacteria	2243	Open in IMG/M
3300032160\|Ga0311301_10499398	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300032160\|Ga0311301_11657427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300032783\|Ga0335079_10004509	All Organisms → cellular organisms → Bacteria	16015	Open in IMG/M
3300032783\|Ga0335079_10057416	All Organisms → cellular organisms → Bacteria	4442	Open in IMG/M
3300032783\|Ga0335079_10067323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4079	Open in IMG/M
3300032783\|Ga0335079_10193456	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300032783\|Ga0335079_10903336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300032805\|Ga0335078_10011642	All Organisms → cellular organisms → Bacteria	13053	Open in IMG/M
3300032805\|Ga0335078_10700250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300032805\|Ga0335078_10854890	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300032829\|Ga0335070_10168213	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300032892\|Ga0335081_10050094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6551	Open in IMG/M
3300032892\|Ga0335081_10085453	All Organisms → cellular organisms → Bacteria	4756	Open in IMG/M
3300032893\|Ga0335069_10932199	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300032955\|Ga0335076_10978958	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300033806\|Ga0314865_185101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300033808\|Ga0314867_038445	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.30%
Aquatic	Environmental → Aquatic	21.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.30%
Freshwater	Environmental → Aquatic → Freshwater	20.75%
Sediment	Environmental → Aquatic → Sediment	0.94%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	55.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.64%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	55.66%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.70%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	19.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	40.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	21.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	19.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.26%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004609	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011076	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100863602	3300000567	Peatlands Soil	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS*
Ga0062389_1005265302	3300004092	Bog Forest Soil	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFTLLPEEVLNRHERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS*
Ga0068958_10291171	3300004609	Peatlands Soil	MLIDKICRGVLAVETECGVCYVQPALAERIRLLWTFRNFTLLPEEVLNRNERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS*
Ga0075017_1009529711	3300006059	Watersheds	CAVLGCGLVLRRITKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS*
Ga0116214_13637551	3300009520	Peatlands Soil	CGLVLRRITKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS*
Ga0116218_10076106	3300009522	Peatlands Soil	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS*
Ga0116216_107227672	3300009698	Peatlands Soil	VRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS*
Ga0116223_102974522	3300009839	Peatlands Soil	CGLVLRRITKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS*
Ga0116223_106445361	3300009839	Peatlands Soil	MLIDKIFRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEAVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQ
Ga0136449_1009834592	3300010379	Peatlands Soil	MLIDKICRGVLAVETECGVRYVQPALAERIRLLWTFRNFTLLPEEVLNRNERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQARPLPPRPARMRQTSGALPRAS*
Ga0136449_1018916561	3300010379	Peatlands Soil	VASFCAVSQKDNRSYFVMLIDKIFRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEAVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS*
Ga0136449_1020388392	3300010379	Peatlands Soil	FVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS*
Ga0136449_1034898861	3300010379	Peatlands Soil	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLANGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTPGALPRAS*
Ga0138574_10905512	3300011076	Peatlands Soil	TKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS
Ga0138581_11017631	3300011085	Peatlands Soil	SQKDNRSYFVMLIDKIFRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEAVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS*
Ga0138579_11162431	3300011090	Peatlands Soil	RITKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS*
Ga0182036_112026312	3300016270	Soil	MLKDKIFHGVLAVETDWGVRYLQPSFFERLCLLWTFRNFHILPEEVLKHHERRLINQLCLKGKVLVNWNGHGELSFFCIGTVERSAQRPQPTLGISPKPVRQAKAIPRVS
Ga0187812_10622232	3300017821	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERTVPRHARPLPPRPARMRQTSGALPRAS
Ga0187812_11084671	3300017821	Freshwater Sediment	MLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLIPPTRVRTRGALPRAS
Ga0187818_102991561	3300017823	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPSLLERIRLLWTFRNFPLLPEEVFNRGERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQAWPSRP
Ga0187814_100302112	3300017932	Freshwater Sediment	MLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRNERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLIPPTRVRTRGALPRAS
Ga0187814_101520231	3300017932	Freshwater Sediment	VASISPRIKKYNRSHFVMLIEKICRGVLAVETDCGLRYVQPSPLERIRLLRTFRNFRLLPEEVLNRQERALVDSLCRQGKFLVNRNGHGDLSLLAIGTVERSAARKQPQSTVLKPPVRVQRASGALPRAS
Ga0187801_101043002	3300017933	Freshwater Sediment	MLIDKICRGVLAVETDCGVRYIQPALIERIRLLWTFRNFHLLPEEVLHRHERALIDSLCRKGKFLVNGNGRGDLSLHCIGTVERAVPRQAWPSRPRPARMRQTSGALPRAG
Ga0187803_100120711	3300017934	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPSLLERIRLLWTFRNFPLLPEEVFNRHERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQAWPSRPRPARM
Ga0187803_100444882	3300017934	Freshwater Sediment	MLIDKICRGVLAVETSSGLRYVQPSLVERVWLLWTFRNFRLLPEEVLNRHERALIDSLCRKGRFLVNGNGRGDLSLHSIGTVERSAARQQPQSTVLKPPTRVQPTAGALPRAS
Ga0187803_101748421	3300017934	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPSLLERIRLLWTFRNFPLLPEEVFNRRERALIDSLCQKGKFLANGNGRGDLSVHCIGTVERAVPRQAWPSRPRPARMQQTSGAL
Ga0187775_100201912	3300017939	Tropical Peatland	MLIDKIWRGVLAVETDCGLRYVQPSLLERVRLTWTFRNFRVLPEGVLNRNERALVASLCRNGKFVADGNGHGDLSLHCIGTVERSVPRQQPLSTMLKPPARVQRTPGALPRAS
Ga0187775_103433572	3300017939	Tropical Peatland	MLIDKICRGVLAVETDYGLRYIKPSLLERIRLIWTFRNFHVLPEEVLKRHERALIDSLCHKGRIMVNRNGHGDLSLFCIGTVERSVPRQQPQSTVLRPARVQQTPGVLP
Ga0187819_101912002	3300017943	Freshwater Sediment	MLIDKICRGVLAVETDYGLRYVQPSLVERIRLLWTFRNFRLLPEEVLNRHELALIDSLCRKGRFLVNGNGRGDLSLHSIGTVERSVARQQPKSTLLKPTRVQPTAGALPRAS
Ga0187819_102053581	3300017943	Freshwater Sediment	MLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGRFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLMPPTRVRTRGALPRAS
Ga0187819_103838501	3300017943	Freshwater Sediment	MLIDKICRGVLAVETDCGVRYIQPALIERIRLLWTFRNFHLLPEEVLNRHERSLIDSLCQKGKFLVNGNGRGDLSLHCIGMVERAVPRQARPLPPRPARMQQTSGALPRAS
Ga0187819_103860622	3300017943	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPSLLERIRLLWTFRNFPLLPEEVFNRGERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQAWPSRPRPSRMRQTSGALP
Ga0187817_101511402	3300017955	Freshwater Sediment	ETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLIPPTRVRTRGALPRAS
Ga0187817_102409251	3300017955	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPSLLERIRLLWTFRNFPLLPEEVFNRRERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQAWPSRPRPARMRQTSGALPRAG
Ga0187817_103746432	3300017955	Freshwater Sediment	MVIDKICRGVLAVETDCGLRYIKPSLLERIRLTWTFRNFHVLPEEVLNRHERALIDSLCLKGKILVNRNGHGDLSLFCIGTVERSVPRQQPKSTVLRPTRVQQAPGVLPRAS
Ga0187779_103810091	3300017959	Tropical Peatland	MLIDKLCRGVLAVDTDCGVRYVQPALAERIRLLWTFRNFTLLPEEVLNRNERALIDSLCEKGKFLVNGNGHGDLSLHCIGTVERTAPRQTRRMPPRPARMQATSALRRAS
Ga0187778_100125355	3300017961	Tropical Peatland	MLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEEVLNRNERALIDSLCQKGKFLVNGNGHGDLSLHCIGTVERAVPRQAKRLPPRPARMQASGALPRAS
Ga0187778_100353263	3300017961	Tropical Peatland	MLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLMPPTRVRTRGALPRAS
Ga0187778_100485443	3300017961	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPRSAVRKPPSRVQRTPGALPYAS
Ga0187776_100054857	3300017966	Tropical Peatland	MLIDKIWRGVLAVETDCGLRYVQPSLLERVRLTWTFRNFRVLPEGVLNRNERALVASLCRIGKFVADGNGHGDLSLHCIGTVERSVPRQQPLSTMLKPPARVQRTPGALPRAS
Ga0187776_106454771	3300017966	Tropical Peatland	MLIEKICRGVLAVETDCGLRYVQPSPLERIRLLWTFRNFRLLPEEVLNRQERALVDSLCRQGKFLVNRNGHGDLSLLSIGTVELSAARKQAQSTVLKPPARVRPASGVLPRAS
Ga0187776_107106572	3300017966	Tropical Peatland	MLIDKICRGVLAVETDYGLRYIKPSLLERIRLIWTFRNFHVLPEEVLKRHERALIDSLCHKGRIMVNRNGHGDLSLFCIGTVERSVPRQQPQSTVLRPARVQPTPGVLPRAS
Ga0187776_110623241	3300017966	Tropical Peatland	VETDYGLRYVQPSLLERVRLTWTFRNFRVLPEGVLNRNERALVDSLCQNGKFVADGNGHGDLSLHCIGTVERSVPRQQPHSTVLKPPARVQRTPSALPRAS
Ga0187783_101069532	3300017970	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTVAREQPRSAGRKPPARVQRTPGALPYAS
Ga0187781_100195275	3300017972	Tropical Peatland	MLIDKLCNGVLAVETDCGVRYVQPALVERIRLLWTFRNFTLLPEEVLTRNERALIESLCQKGKFLVNGNGHGELSLHCIGTVERTAPRQARRMPPRPARLRATDALPRAS
Ga0187781_100886152	3300017972	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLLERIRLTWTFRNFRVLPESVLKRSERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPRSAMRKPPTRVQRTPGALPHAS
Ga0187781_101749961	3300017972	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTIAREQPRSAGRKPPARVQRTPGALPYAS
Ga0187781_101998791	3300017972	Tropical Peatland	KLCNGVLAVETDCGVRYVQPALVERIRLLWTFRNFTLLPEEVLTRNERALIDSLCQKGKFLVNGNGHGDLSLHCIGTVERTAARQARRMPPRPARLRATDALPRAS
Ga0187781_102117022	3300017972	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALVDSLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPRSAGRKPPARVQRTRGALPYAS
Ga0187781_106308631	3300017972	Tropical Peatland	MLIDKLCNGVLAVDTDCGVRYVQPALAERIRLLWTFRNFTLLPEEVLNRNERALIDSLCEKGKFLVNGNGHGDLSLHCIGTVERTASRQARRFSPRPARLQATGALRRAS
Ga0187780_100970792	3300017973	Tropical Peatland	MLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQSRSAVLRPAARARRTPGALPRAS
Ga0187780_109853822	3300017973	Tropical Peatland	MLIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPRSAVRKPPSRVQRTPGALPYAS
Ga0187782_100029682	3300017975	Tropical Peatland	MLIEKICRGVLAVETQCGIRYVQPSLCQRVRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLMPPTRVRTRGALPRAS
Ga0187782_100096371	3300017975	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPRSAGRKPPARVQRTPGALPYAS
Ga0187782_101721981	3300017975	Tropical Peatland	MLIDKLCNGVLAVETDCGVRYVQPALVERIRLLWTFRNFTLLPEEVLTRNERALIDSLCQKGKFLVNGNGHGDLSLHCIGTVERTAARQARRMPPRPARLRATDALPRAS
Ga0187782_113099861	3300017975	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTIAREQPRSAGRKPPARVQRTPGALPY
Ga0187782_116686162	3300017975	Tropical Peatland	QPSLFERIRLTWTFRNFRVLPESVLKRGERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPRSAGRKPPARVQRTPGALPYAS
Ga0187767_102428401	3300017999	Tropical Peatland	MLIDKIVRGVLAVQTDCGTRYVQPALAERMRLLWTFRNFSVLPEEVLNRNERSLIESLCHKGKFLVNGNGHGDLSLHCIGTVERSVPRQAKRVPPRPARMQASGALPRAS
Ga0187815_101953251	3300018001	Freshwater Sediment	MLIDKICRGVLAVETSSGLRYVQPSLVERVWLLWTFRNFRLLPEEVLNRHERALIDSLCRKGRFLVNGNGRGDLSLHSIGTVERSVARQQPKSTLLKPTRVQPTAGALPRAS
Ga0187815_102588891	3300018001	Freshwater Sediment	MVIDKICRGVLAVETDCGLRYIKPSLLERIRLTWTFRNFHVLPEEVLNRHERALIDSLCLKGKILVNRNGHGDLSLFCIGTVERSVPRQQPKSTVLRPARVQQ
Ga0187805_102091592	3300018007	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRQARPLPPRPARMQQTSGALPRAS
Ga0187810_101453591	3300018012	Freshwater Sediment	MLIDKICRGVLAVETDYGVRYIQPSLLERIRLLWTFRNFPLLPEEVFNRGERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQAWPSRPRPARMRQTSGAL
Ga0187810_102967601	3300018012	Freshwater Sediment	GVLAVETDCGVRYIQPALIERIRLLWTFRNFHLLPEEVLNRHERSLIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQARPLPPRPARMQQTSGALPRAS
Ga0187766_100341902	3300018058	Tropical Peatland	MLIEKICRGVLAVETQCGIRYVQPSVCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLMPPTRVRTRGALPRAS
Ga0187784_101459941	3300018062	Tropical Peatland	MLIDKLCNGVLAVETDCGVRYVQPALAERIRLLWTFRNFTLLPEEVLTRNERALIDSLCQKGKFLVNGNGHGELSLHCIGTVERTAPRQARRMPPRPARLRATD
Ga0187773_102378922	3300018064	Tropical Peatland	MLIDKICRGLLAVETDCGLRYIQPSLLARVRLTWTFRNFRVLPEGVLNRNERALVDSLCRNGKFVADGNGHGDLSLHCIGTVERSVPRQQPHSTMLKPPARVQRTPLPRAS
Ga0187772_100654293	3300018085	Tropical Peatland	MLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGTVERSVPREQPRSAVLMPPTRVRTRGALPRAS
Ga0187772_111563362	3300018085	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALVDSLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPCSA
Ga0187769_100245253	3300018086	Tropical Peatland	MLKDKICRGVLAVETDCGVRYVQPSLCQRIRLLWTFRNFRGLPEEVLHRHERALIDSLCRPGKFLVNWNGRGDLSLHAIGTVERSARRQAPSTVLKVPARVQPAPGALPRAS
Ga0187769_103524332	3300018086	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFHVLPESVLKRSERALIESLCRNGKFLVDGNGNGDLSLRSIGTVERTVPREQPRSAVRRPPARAQRTPGALPYAS
Ga0187769_104325701	3300018086	Tropical Peatland	MICAVLGCARFCAALPKDNRSHFVMLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEGVLNRHERALIDSLCQKGRFLVNGNGHGDLSLHCIGTVERAVPRHARRLPPRPARMRQTPGALPRAS
Ga0187769_104780411	3300018086	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALVDSLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPCSAMRKPPTRVQRTPGALPHAS
Ga0187769_108292841	3300018086	Tropical Peatland	MLIDKLCNGVLAVETDCGVRYVQPALAERIRLLWTFRNFTLLPEEVLTRNERALIDSLCQKGKFLVNGNGHGDLSLHCIGTVERTAPRQARRMPPRPARLRTTDALPRAS
Ga0187771_100376693	3300018088	Tropical Peatland	MLKDKICRGVLAVETDCGVRYVQPSLLQRIRLLWTFRNFRGLPEEVLHRHERALIDSLCRPGKFLVNWNGRGDLSLHAIGTVERSARRQAPSTVLKVPARVQPAPGALPRAS
Ga0187771_103011802	3300018088	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRGERALVESLCRNGKFLVNGNGRGDLSLRSIGTVERTVPREQPRSAMRKPPTRVQRTPGALPHAS
Ga0187771_109305201	3300018088	Tropical Peatland	MLIDKICRGVLAIETDYGVRYVQLSLLERVRLTWTFRNFRVLPESVLKRNERALVNALCRNGRFLADGNGNGDLSLRCIGTVERSVPRQQPQSTVLKPPARVQRTPGALPRAS
Ga0187771_112127411	3300018088	Tropical Peatland	ASRFVQCYGVARFCAVSPKDNRSYFVMLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEGVLNRHERALIDSLCQKGRFLVNGNGHGDLSLHCIGTVERAVPRHARRLPPRPARMRQTPGALPRAS
Ga0187770_100524623	3300018090	Tropical Peatland	MLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEGVLNRHERALIDSLCQKGRFLVNGNGHGDLSLHCIGTVERAVPRHARRLPPRPARMRQTPGALPRAS
Ga0187770_104964201	3300018090	Tropical Peatland	MLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRNERSLIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQSRSAVLRPAARAQRTPGALPRAS
Ga0187770_107661881	3300018090	Tropical Peatland	MLKDKICRGVLAVETDCGVRYVQPSLCQRIRLLWTFRNFRGLPEEVLHRHERALIDSLCRPGKFLVNWNGRGDLSLHAIGTVERSARRQAPSTVLK
Ga0187770_113261401	3300018090	Tropical Peatland	MVIEKICRGVLAVETDYGVRYVQPSLFERIRLTWTFRNFRVLPESVLKRSERALIESLCRNGKFLVNGNGHGDLSLRSIGTVERTVPREQPCSATRKPPTRVQRTPGALPHAS
Ga0187798_13336101	3300019275	Peatland	PKDNRSYFVMLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEGVLNRHERALIDSLCQKGRFLVNGNGHGDLSLHCIGTVERAVPRHARRLPPRPARMRQTPGALPRAS
Ga0208827_10147663	3300027641	Peatlands Soil	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS
Ga0208696_10384391	3300027696	Peatlands Soil	SCITICAVLACGLVLRRITKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS
Ga0209517_101810201	3300027854	Peatlands Soil	YFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQTSGALPRAS
Ga0209517_103201602	3300027854	Peatlands Soil	CAVLGCGLVLRRITKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS
Ga0209415_102872422	3300027905	Peatlands Soil	CGLVLRRITKRQQGYFVMLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS
Ga0310037_103321141	3300030494	Peatlands Soil	LIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS
Ga0316363_100418483	3300030659	Peatlands Soil	MLIDKICRGVLAVETDYGVRYIQPALAERIRLLWTFRNFSLLPEEVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPARMRQASGALPRAS
Ga0311301_104993982	3300032160	Peatlands Soil	MLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFTLLPEEVLNRNERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERAVPRQARPLPPRPARMRQTSGALPRAS
Ga0311301_116574271	3300032160	Peatlands Soil	MLIDKIFRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEAVLNRHERALIDSLCQQGKFLVNGNGHGDLSLHCIGTVERAVPRHARPLPPRPAR
Ga0335079_100045098	3300032783	Soil	MLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFTLLPEEVLNRNERALIDSLCQKGKFLVNGNGHGDLSLHCIGTVERAVPRQAKRLPPRPARMQASGALPRAS
Ga0335079_100574162	3300032783	Soil	MLTDKLYRGVLAVETECGVRYVQPSLLERIRLLWTFRNFRLLPEQVLTRQERALVDTLCRKGKFLTNGNGHGDLSLLAIGTVERSAPRKQPQSVLAPARAHRTPDALRRAS
Ga0335079_100673232	3300032783	Soil	MLIDKIVRGVLAVQTDCGTRYVQPALAERVRLLWTFRNFSVLPEEVLNRNERSLIESLCHKGKFLVNGNGHGDLSLHCIGTIERSVPRQAKRLPPRPARMQAPGALPRAS
Ga0335079_101934562	3300032783	Soil	MLIEKICHGVLAVETDCGLRYVQPAPLERIRLLWTFRNFRLLPEEVLNRHERTLVDSLCRRGKFLANGNGHGDLSLLCIGTVELSAARKQPQSTILKPAARVQRAPGALPRAS
Ga0335079_109033361	3300032783	Soil	HFVMLIEKICRGVLAVETQCGIRYVQPSLCQRIRLTWTFRNFRVLPESVLKRHERALIDSLCRNGKFLVNGNGHGDLSLRCIGIVERSVPREQPRSAVLIPPTRVRTRGALPRAS
Ga0335078_100116428	3300032805	Soil	MLTDKLYRGVLAVETECGVRYVQPSLLERIRLLWTFRNFRLLPEQVLTRQERALVDTLCRKGKFLTNGNGHGDLSLLAIGTVERSAPRKQPQSVLAPARAHRTSDALRRAS
Ga0335078_107002502	3300032805	Soil	MLIDKLCNGVLAVETDCGVRYVQPALVERMRLLWTFRNFTLLPEEVLTRNERALIDSLCQKGKFLVNGNGHGDLSLHCIGTVERTAPRHARRMPPRPARLRTTDALPRAS
Ga0335078_108548902	3300032805	Soil	LAILIDKLFRGVLAIETDCGRRYVQPALGERLRLLWTFRNFRLLPEEVLTRSERTLISSLYRKGNFLANGNGRGDLSLHAIGIVELAAARQQPQATVFKPSARVQPTRGALPRAG
Ga0335070_101682132	3300032829	Soil	MLIDKICRGVLAVETDCGVRYVQPSLLERVRLTWTFRNFRVLPEGVLKRNERALIDSLCHNGKFVADGNGHGDLSLRCIGTVERSVPRQQPHSTMLKPPARVQRTPGALPRAS
Ga0335081_100500946	3300032892	Soil	MLIEKICRGVLVVETNSGLRYVQPSLVQRIRLLWTFRNFRLLPEEVLNRHERALIDVLCRKGRFLVNGNGRGDLSLLAIGTVERSLARQQPQSTVLKPPARVQPASGALPRAS
Ga0335081_100854534	3300032892	Soil	MLIDKICRGVLAVETDCGVRYIQPSLLERIRLTWTFRNFHVLPEEVLNRHERALIDSLCRNGKFLVNGNGRGDLSLHSIGTVERSVPRQQPKSTVLRPARVQQAPGALPRAS
Ga0335069_109321992	3300032893	Soil	MLIDKICRGVLAVETDWGVRYVQPSLLERVRLTWTFRNFRVLPEGVLKRNERALIDSLCRNGRFVADGNGHGDLSLRCIGTVERSVPRQQPHSTMLKPPARVQQTPGALPRAS
Ga0335076_109789582	3300032955	Soil	ETDYGVRYVQPSLFERVRLTWTFRNFRVLPESVLNRNERLLIDSLCRNGKFLVNGNGHGDLSLRSIGTVEKSLPRKPARSGVLRSPAGVRRPDALPRAS
Ga0314865_185101_10_345	3300033806	Peatland	MLIDKICRGVLAVETDCGVRYVQPALAERIRLLWTFRNFSLLPEEVLNSNERALIDSLCQKGKFLVNGNGRGDLSLHCIGTVERTVPRQARRAPPRPARMQQTSGALPRAS
Ga0314867_038445_33_374	3300033808	Peatland	MLIDKICRGVLAVETDCGVRYVQPSLLERVRLTWTFRNFRVLPEGVLKRNERALIDSLCRNGRFVAHGNGHGDLSLRCIGTVERSVPRQQPHSTMLKPPARVRQTPGVLPRAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093105

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences