Metagenome / Metatranscriptome Family F093081

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093081
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	44 residues
Representative Sequence	AEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPDFKYWY
Number of Associated Samples	81
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	97.17 %
% of genes from short scaffolds (< 2000 bps)	84.91 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.925 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (46.226 % of family members)
Environment Ontology (ENVO)	Unclassified (36.792 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.830 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.35% β-sheet: 0.00% Coil/Unstructured: 74.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF12840	HTH_20	14.15
PF12710	HAD	10.38
PF08327	AHSA1	7.55
PF06983	3-dmu-9_3-mt	5.66
PF01244	Peptidase_M19	5.66
PF00072	Response_reg	4.72
PF01757	Acyl_transf_3	4.72
PF00005	ABC_tran	3.77
PF01479	S4	3.77
PF13520	AA_permease_2	2.83
PF00903	Glyoxalase	1.89
PF00398	RrnaAD	0.94
PF14294	DUF4372	0.94
PF13561	adh_short_C2	0.94
PF00293	NUDIX	0.94
PF13439	Glyco_transf_4	0.94
PF00939	Na_sulph_symp	0.94
PF13808	DDE_Tnp_1_assoc	0.94
PF05973	Gp49	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	5.66
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	5.66
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	5.66
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	0.94
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.94
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.94
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.94
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.92 %
Unclassified	root	N/A	32.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.92 %
Unclassified	root	N/A	32.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.92 %
Unclassified	root	N/A	32.08 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	44.34 %
Unclassified	root	N/A	32.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.77 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	33.02 %
Unclassified	root	N/A	32.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	30.19 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30.19 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.83 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	3.77 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.83 %
Komagataeibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	0.94 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.94 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.94 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.94 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.08 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.83 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.94 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.94 %
Acidicapsa acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	0.94 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.94 %
Komagataeibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	0.94 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_100448963	Not Available	1424	Open in IMG/M
3300005602\|Ga0070762_10809427	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	634	Open in IMG/M
3300009624\|Ga0116105_1149281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	618	Open in IMG/M
3300009628\|Ga0116125_1215525	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009645\|Ga0116106_1129378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	811	Open in IMG/M
3300014491\|Ga0182014_10281167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	861	Open in IMG/M
3300014492\|Ga0182013_10567447	Not Available	582	Open in IMG/M
3300014498\|Ga0182019_10844249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	657	Open in IMG/M
3300014655\|Ga0181516_10472823	Not Available	642	Open in IMG/M
3300014838\|Ga0182030_10280016	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300014838\|Ga0182030_10867229	Not Available	814	Open in IMG/M
3300014839\|Ga0182027_10742842	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300014839\|Ga0182027_12256225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	515	Open in IMG/M
3300016750\|Ga0181505_10524403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	862	Open in IMG/M
3300017988\|Ga0181520_11090764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	525	Open in IMG/M
3300018009\|Ga0187884_10186036	Not Available	862	Open in IMG/M
3300018016\|Ga0187880_1264942	Not Available	752	Open in IMG/M
3300018019\|Ga0187874_10084253	Not Available	1405	Open in IMG/M
3300018019\|Ga0187874_10212699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	800	Open in IMG/M
3300018043\|Ga0187887_10830480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	546	Open in IMG/M
3300021181\|Ga0210388_10845441	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300022824\|Ga0224518_1014307	Not Available	586	Open in IMG/M
3300022877\|Ga0224527_1032334	Not Available	1126	Open in IMG/M
3300023091\|Ga0224559_1063202	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1435	Open in IMG/M
3300023101\|Ga0224557_1111137	Not Available	1084	Open in IMG/M
3300023101\|Ga0224557_1290220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	524	Open in IMG/M
3300025414\|Ga0208935_1040687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	618	Open in IMG/M
3300027575\|Ga0209525_1140516	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300027609\|Ga0209221_1133037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	626	Open in IMG/M
3300027609\|Ga0209221_1156805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	564	Open in IMG/M
3300028070\|Ga0255353_1054379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	801	Open in IMG/M
3300028070\|Ga0255353_1063947	Not Available	700	Open in IMG/M
3300028087\|Ga0255354_1090789	Not Available	550	Open in IMG/M
3300028560\|Ga0302144_10238181	Not Available	589	Open in IMG/M
3300028562\|Ga0302151_10285036	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300028562\|Ga0302151_10312265	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300028566\|Ga0302147_10326592	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300028572\|Ga0302152_10173912	Not Available	693	Open in IMG/M
3300028762\|Ga0302202_10517271	Not Available	537	Open in IMG/M
3300028765\|Ga0302198_10180377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1061	Open in IMG/M
3300028765\|Ga0302198_10460726	Not Available	573	Open in IMG/M
3300028766\|Ga0302269_1100024	Not Available	854	Open in IMG/M
3300028783\|Ga0302279_10156112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1123	Open in IMG/M
3300028801\|Ga0302226_10361097	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300028813\|Ga0302157_10131240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1517	Open in IMG/M
3300028813\|Ga0302157_10325119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	835	Open in IMG/M
3300028874\|Ga0302155_10350141	Not Available	633	Open in IMG/M
3300029817\|Ga0247275_1003426	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	9190	Open in IMG/M
3300029882\|Ga0311368_10839963	Not Available	621	Open in IMG/M
3300029883\|Ga0311327_10167162	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300029883\|Ga0311327_10385168	Not Available	886	Open in IMG/M
3300029883\|Ga0311327_10524518	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300029907\|Ga0311329_10461648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	872	Open in IMG/M
3300029908\|Ga0311341_10143603	Not Available	1547	Open in IMG/M
3300029908\|Ga0311341_10324542	Not Available	909	Open in IMG/M
3300029908\|Ga0311341_10581507	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	632	Open in IMG/M
3300029911\|Ga0311361_10251547	All Organisms → cellular organisms → Bacteria → Acidobacteria	2068	Open in IMG/M
3300029911\|Ga0311361_10373525	All Organisms → cellular organisms → Bacteria → Acidobacteria	1524	Open in IMG/M
3300029914\|Ga0311359_11146407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	513	Open in IMG/M
3300029915\|Ga0311358_10921685	Not Available	610	Open in IMG/M
3300029917\|Ga0311326_10111342	All Organisms → cellular organisms → Bacteria → Acidobacteria	1505	Open in IMG/M
3300029917\|Ga0311326_10253327	Not Available	906	Open in IMG/M
3300029917\|Ga0311326_10556266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	555	Open in IMG/M
3300029920\|Ga0302142_1132196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	767	Open in IMG/M
3300029922\|Ga0311363_10117339	All Organisms → cellular organisms → Bacteria → Acidobacteria	3566	Open in IMG/M
3300029945\|Ga0311330_10260739	All Organisms → cellular organisms → Bacteria → Acidobacteria	1525	Open in IMG/M
3300029951\|Ga0311371_10342283	All Organisms → cellular organisms → Bacteria → Acidobacteria	2075	Open in IMG/M
3300029952\|Ga0311346_10222644	All Organisms → cellular organisms → Bacteria → Acidobacteria	2065	Open in IMG/M
3300029952\|Ga0311346_10863946	Not Available	752	Open in IMG/M
3300029953\|Ga0311343_10425123	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300029954\|Ga0311331_10043595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6412	Open in IMG/M
3300029955\|Ga0311342_10903566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300029982\|Ga0302277_1130768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Komagataeibacter	1051	Open in IMG/M
3300029992\|Ga0302276_10407895	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300030011\|Ga0302270_10003773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14303	Open in IMG/M
3300030020\|Ga0311344_10332269	All Organisms → cellular organisms → Bacteria → Acidobacteria	1440	Open in IMG/M
3300030041\|Ga0302274_10436546	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300030058\|Ga0302179_10476601	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	548	Open in IMG/M
3300030503\|Ga0311370_10216095	All Organisms → cellular organisms → Bacteria → Acidobacteria	2562	Open in IMG/M
3300030503\|Ga0311370_11564840	Not Available	685	Open in IMG/M
3300030507\|Ga0302192_10070265	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300030518\|Ga0302275_10424612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	687	Open in IMG/M
3300030520\|Ga0311372_10041557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9140	Open in IMG/M
3300030524\|Ga0311357_10457983	Not Available	1194	Open in IMG/M
3300030524\|Ga0311357_11675169	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300030617\|Ga0311356_10700797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	970	Open in IMG/M
3300030617\|Ga0311356_11421266	Not Available	630	Open in IMG/M
3300030617\|Ga0311356_11774579	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300030618\|Ga0311354_11275543	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300030677\|Ga0302317_10510068	Not Available	523	Open in IMG/M
3300030688\|Ga0311345_10171377	All Organisms → cellular organisms → Bacteria → Acidobacteria	2267	Open in IMG/M
3300030906\|Ga0302314_11020951	Not Available	796	Open in IMG/M
3300031258\|Ga0302318_10068260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1501	Open in IMG/M
3300031259\|Ga0302187_10167042	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300031259\|Ga0302187_10311829	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031261\|Ga0302140_10392847	All Organisms → cellular organisms → Bacteria → Acidobacteria	1122	Open in IMG/M
3300031525\|Ga0302326_10302801	Not Available	2553	Open in IMG/M
3300031788\|Ga0302319_10437400	All Organisms → cellular organisms → Bacteria → Acidobacteria	1437	Open in IMG/M
3300031788\|Ga0302319_11577721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	580	Open in IMG/M
3300033402\|Ga0326728_10007233	All Organisms → cellular organisms → Bacteria	28866	Open in IMG/M
3300033402\|Ga0326728_10059914	All Organisms → cellular organisms → Bacteria → Proteobacteria	5303	Open in IMG/M
3300033405\|Ga0326727_10696317	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa acidisoli	814	Open in IMG/M
3300033405\|Ga0326727_10780903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	742	Open in IMG/M
3300034199\|Ga0370514_009854	Not Available	2206	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.74%
Aquatic	Environmental → Aquatic	12.26%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	74.53%
Soil	Environmental → Terrestrial → Soil	13.21%
Freshwater	Environmental → Aquatic → Freshwater	12.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	74.53%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.55%
Loam	Environmental → Terrestrial → Soil → Loam	3.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	74.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.49%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	46.23%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	16.04%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.66%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.77%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.89%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300022824	Peat soil microbial communities from Stordalen Mire, Sweden - IR.B.S.T-25	Environmental	Open in IMG/M
3300022877	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0	Environmental	Open in IMG/M
3300023091	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028070	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25	Environmental	Open in IMG/M
3300028087	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T50	Environmental	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028562	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028785	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_2	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1004489631	3300004092	Bog Forest Soil	DYRDTYAEVTDLGAFDAPWIMDHEHHHYFWLRHRKRTYAADWPQFKHWD*
Ga0070762_108094272	3300005602	Soil	EVIDLGPFDAPWVMDFEHHHYFWLRHRKRTFAADWPALKFWY*
Ga0116105_11492811	3300009624	Peatland	DLGPFDAPWIMDHEHRHYFWLRHRKRSFAADWLALKYWY*
Ga0116125_12155251	3300009628	Peatland	LGPFDSPWIMDHEHLHYFWLRHRKVPYAVAWPELKYWY*
Ga0116106_11293781	3300009645	Peatland	PFDAPWIMDFEHLHYFWLRHRKQPYSADWPEFKFWY*
Ga0182014_102811671	3300014491	Bog	LGPFDAPWIMDFEHQHYFWLRHRKRPYSADWPDFKFWY*
Ga0182013_105674472	3300014492	Bog	PFDAPWIMDHEHHHYFWLRHRKRTYAADWPDFKYWY*
Ga0182019_108442491	3300014498	Fen	NYEQVIDLGPFDAPWIMDIEHHHYFWLRHRKRPYAGDWPSVKFWY*
Ga0181516_104728232	3300014655	Bog	LKDYAEVIDLGAFDAPWIMDFEHQHYFLMRHRKRTFAEDWPKIKFWY*
Ga0182030_102800163	3300014838	Bog	DDYKNSFDEVIDLGPFDAPWTMDFEHRHYFWLRHRKRPYSADWPSIKKWN*
Ga0182030_108672291	3300014838	Bog	TDSYEEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPQFKFWY*
Ga0182027_107428424	3300014839	Fen	DAPWIMDHEHHHYFWLRHRKRTYASEWPEFKYWY*
Ga0182027_122562251	3300014839	Fen	YADTYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTFAADWPELKYWY*
Ga0181505_105244031	3300016750	Peatland	DSRDDYTDTYAEVVDLGPFDAPWIMDFEHLHYFWLRHRKRPYSADWPEFKFWY
Ga0181520_110907642	3300017988	Bog	GPFDAPWIMDIEHRHYFWLRHRKRTYAEDWPSVKFWY
Ga0187884_101860361	3300018009	Peatland	PFDTPWIMDHEHHHYFWLRHRKRPFAADWPEFKYWY
Ga0187880_12649421	3300018016	Peatland	KDYADYYAEVIDLGPFDVPWIMDHEHHHYFWLRHRKRTYEADWPKLKFWY
Ga0187874_100842532	3300018019	Peatland	GPFDAPWTMDYEHRRFFWLRGRKQPFAVDWPKLKFWF
Ga0187874_102126991	3300018019	Peatland	TDTYAEVTDLGPFDAPWIMDFEHQHYFWLRHRKRSYAADWPDFKFWY
Ga0187887_108304802	3300018043	Peatland	GPFDAPWIMDHEHRHYFWLRHRKRSFAADWLALKYWY
Ga0210388_108454413	3300021181	Soil	LGSFDAPWIMDHEHLHYYWLRDRKRSYAADWPELKYWY
Ga0224518_10143071	3300022824	Soil	DDYAQVVDLGPFDAPWIMDHEHHHYLWLRHRKRPYAAEWPQFKYWY
Ga0224527_10323342	3300022877	Soil	DSYAEVNDLGPFDAPWIMDHEHHHYFWLRHRKRSYAADWPEFKYWY
Ga0224559_10632021	3300023091	Soil	PKDYADSYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPEFKYWY
Ga0224557_11111371	3300023101	Soil	DYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYEADWPDFKYWY
Ga0224557_12902202	3300023101	Soil	FDAPWIMDFEHHHYFWLRHRKLPYAADWPKFKFWY
Ga0208935_10406871	3300025414	Peatland	DLGPFDAPWIMDHEHRHYFWLRHRKRSFAADWLALKYWY
Ga0209525_11405162	3300027575	Forest Soil	YTDEYAKVVDLGSFEAPWIMDHEHLHYYWLRDRKRSYAADWPELKYWY
Ga0209221_11330372	3300027609	Forest Soil	AEVVDLGPFDEPWIMDHEHLHYFWLRHRKAPYAAAWPELKYWY
Ga0209221_11568051	3300027609	Forest Soil	DDSKGYSENYEQVIDLGAFDAPWIMDHEHLHYFLLKHRKKSYETEWQEFKYWY
Ga0255353_10543793	3300028070	Soil	EVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPDFKYWY
Ga0255353_10639471	3300028070	Soil	YAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRPYATDWPAFKYWY
Ga0255354_10907891	3300028087	Soil	YKDSYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRSYAADWPEFKYWY
Ga0302144_102381811	3300028560	Bog	KYAEVVDLGPFDSPWTMDHEHLRYFWLRHRKAPYPQAWTTLKKWD
Ga0302151_102850361	3300028562	Bog	PFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0302151_103122651	3300028562	Bog	VVDLGPFDEPWTMDHEHLHYFWLRHRKVPYAAAWPELKYWY
Ga0302147_103265921	3300028566	Bog	YAEVVDLGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0302152_101739121	3300028572	Bog	PFDAPWIMDHEHHHYFWLRHRKRTYEADWPEFKYWY
Ga0302202_105172711	3300028762	Bog	AEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPDFKYWY
Ga0302198_101803771	3300028765	Bog	GPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0302198_104607261	3300028765	Bog	GNDRKDYLESYEEVIDLGAFDAPWIMDHEHHHYFLLKRRKKTYEQEWADFKYWY
Ga0302269_11000242	3300028766	Bog	SYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPEFKFWY
Ga0302279_101561121	3300028783	Bog	VDLGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0302201_102464892	3300028785	Bog	LGEQREDYTNSYAEVIDLGPFDAPWIMDFEHLHYFWLRHRKSSYAADWQDFKHWY
Ga0302226_103610971	3300028801	Palsa	FDAPWIMDHEHHHYFLLKGRKKTYEQEWPEFKYWY
Ga0302157_101312403	3300028813	Bog	DPKDYTDDYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYEAEWPDFKYWY
Ga0302157_103251191	3300028813	Bog	PDDYKNSFDEVIDLGPFDAPWTMDFEHRHYFWLRHRKRPYSADWPSIKKWN
Ga0302155_103501411	3300028874	Bog	DPKDYTDDYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYEADWPDFKYWY
Ga0247275_10034263	3300029817	Soil	MAHQWRAWLMDHEHHHYFWLRHRKRPYAAEWPEFKYWY
Ga0311368_108399631	3300029882	Palsa	DLGAFDAPWIMDHEHHHYFLLKRRRNSYASEWPEFKYWY
Ga0311327_101671624	3300029883	Bog	NYTDNYAEVVDLGPFDSPWTMDHEHLRYFWLRHRKVPYAQAWPSLKYWY
Ga0311327_103851681	3300029883	Bog	YEEVIDLGAFDAPWIMDHEHHHYFLLKRRKKTYEQEWADFKYWY
Ga0311327_105245181	3300029883	Bog	GPFDAPWIMDHEHRHYFWLRHRKRSYAADWLALKYWY
Ga0311329_104616481	3300029907	Bog	VIDLGPFDAPWIMDHEHHHYFWLRHRKRTFAADWPELKYWY
Ga0311341_101436031	3300029908	Bog	IDLGPFDAQWTMDHEHLRYFWLRHRKRTYAEDWPNVKYWY
Ga0311341_103245422	3300029908	Bog	DPKDYTDNYAEVVDLGPFDAPWIMDHEQHHYFWLRHRKRPYSADWPTFKYWY
Ga0311341_105815072	3300029908	Bog	IDLGPFDEPWTMDFEHLHYFWLRHRKRPYSQDWPLLKHWY
Ga0311361_102515471	3300029911	Bog	YKNSFDEVIDLGPFDAPWTMDFEHRRYFWLRHRKRPYSADWPSIKKWN
Ga0311361_103735254	3300029911	Bog	DNYAEVVDLGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0311359_111464072	3300029914	Bog	FAEVVDLGPFDAPWIMDHEHRHYFLLKHRKRSYAADWLALKYWY
Ga0311358_109216851	3300029915	Bog	PFDAPWIMDHEHHHYFWLRHRKRNYEADWPEFKYWY
Ga0311326_101113424	3300029917	Bog	NYAEVVDLGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0311326_102533272	3300029917	Bog	TDKYAEVIDLGPFDAQWTMDHEHLRYFWLRHRKRTYAEDWPNVKYWY
Ga0311326_105562661	3300029917	Bog	EEVVDLGPFDAAWTMDFEHLHYFWLRHRKRSYAEDWAQVKYWY
Ga0302142_11321963	3300029920	Bog	GKQAADYTDNYAEVVDLGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0311363_101173396	3300029922	Fen	YGEVIDLGRFDSPWTMDHEHLRYFWLRHRKVPYSEAWPSLKKWD
Ga0311340_102918821	3300029943	Palsa	VGNDRKDYLDNYEEVIDLGAFDAPWIMDHEHHHYFLLKHRKKTYEQEWADFKYWY
Ga0311330_102607394	3300029945	Bog	VVDLGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0311371_103422834	3300029951	Palsa	SQVVDLGPFDEPWTMDHEHLHYFWLRNRKPTYAENWNQVKYWY
Ga0311346_102226441	3300029952	Bog	DYKNSFDEVIDLGPFDAPWTMDFEHRRYFWLRHRKRPYSADWPSIKKWN
Ga0311346_108639461	3300029952	Bog	PKDYTDTYAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPDFKYWY
Ga0311343_104251234	3300029953	Bog	DKYGEVIDLGRFDSPWTMDHEHLRYFWLRHRKVPYSEAWPSLKKWD
Ga0311331_100435951	3300029954	Bog	YAEVIDLGPFDAPWIMDHEHHHYFWLRHRKRTYAADWPEFKFWY
Ga0311342_109035661	3300029955	Bog	IDLGPFDSPWIMDHEHHHYFWLRHRKIPYSANWQDLKFWY
Ga0302277_11307682	3300029982	Bog	DSAADYKDTYAEVIDLGPFDSPWIMDHEHHHYFWLRHRKRTYAEDWPNLKYWY
Ga0302276_104078951	3300029992	Bog	YTDKYAEVVDLGPFDEPWTMDHEHLHYFWLRHRKVPYAAAWPELKYWY
Ga0302270_1000377314	3300030011	Bog	GPFDAQWTMDHEHLRYFWLRHRKRTYAEDWPNVKYWY
Ga0311344_103322691	3300030020	Bog	DLGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0302274_104365461	3300030041	Bog	VIDLGPFDSPWIMDHEHHHYFWLRHRKRTYAEDWPNLKYWY
Ga0302179_104766012	3300030058	Palsa	KNYSKSYEQVIDLGAFDAPWIMDHEHLHYFLLKHRKVSYAAEWPEFKYWY
Ga0311370_102160954	3300030503	Palsa	SEVIDLGPFDEPWTMDHEHLHYFWLRHRKAPYAAAWPELKYWY
Ga0311370_115648401	3300030503	Palsa	IDLGPFDAPWIMDHEHLHYFLLKHRKRTYAQDWPELKYWY
Ga0302192_100702651	3300030507	Bog	LGSFDSPWIMDHEHRHYFWLRHRKRSYAADWLALKYWY
Ga0302275_104246122	3300030518	Bog	AEVIDLGPFDAPWIMDFEHLHYFWLRHRKSSYAADWQDFKHWY
Ga0311372_1004155711	3300030520	Palsa	DAKDYTDNYSEVVDLGPFDSPWTMDHEHLRYFWLRHRKRSYAQDWPQFKYWL
Ga0311357_104579831	3300030524	Palsa	AFDAPWIMDHEHHHYFLLKRRRNSYASEWPEFKYWY
Ga0311357_116751692	3300030524	Palsa	ARDYTDRYAEVIDLGPFDNPWTMDFEHLHYFWLRHRKVPFAADWPTVKFWG
Ga0311356_107007971	3300030617	Palsa	DLGPFDAPWTMDHEHRHHYFWLRQRKLSYAADWPHFKFWY
Ga0311356_114212661	3300030617	Palsa	KDYLDNYEEVIDLGAFDAPWIMDHEHHHYFLLKHRKKTYEQEWADFKYWY
Ga0311356_117745792	3300030617	Palsa	AEVIDLGAFDAPWIMDHEHHHYFLLKGRKKTYEQEWPEFKYWY
Ga0311354_112755431	3300030618	Palsa	HREDYLKSYAEAIDLGAFDAPWIMDHEHHHYFLLKGRKKTYEQEWPEFKYWY
Ga0302317_105100682	3300030677	Palsa	GAFDAPWIMDHEHHHYFLLKRRRNSYASEWPEFKYWY
Ga0311345_101713775	3300030688	Bog	KYAEVIDLGPFDSPWTMDHEHLRYFWLRHRKVPYAQAWPSLRYWY
Ga0302314_110209512	3300030906	Palsa	RDYLDNNEEAIDLGPFDAPWIMDHEHLHYFLLKHRKRTYAQDWPELKYWY
Ga0302318_100682602	3300031258	Bog	KDLYAEVIDLGPFDSPWIMDHEHHHYFWLRHRKRTYAEDWPNLKYWY
Ga0302187_101670424	3300031259	Bog	KYGEVIDLGRFDSPWTMDHEHLRYFWLRHRKVPYSEAWPSLKKWD
Ga0302187_103118292	3300031259	Bog	ASQYKDNYEEVLDLGPFDAAWTMDHEHLRFFWLRHRKRTYAESWPELKFWL
Ga0302140_103928471	3300031261	Bog	KYAEVVDLGPFDEPWTMDHEHLHYFWLRHRKVPYAAAWPELKYWY
Ga0302326_103028013	3300031525	Palsa	FDAPWTMDHEHRHHYFWLRQRKLSYAADWPHFKFWY
Ga0302319_104374001	3300031788	Bog	LGPFDAPWTMDHEHLRYFWLRHRKRPYAEDWASVKYWY
Ga0302319_115777211	3300031788	Bog	EYEEVIDLGAFDAPWIMDHEHHHYFWLRHRKRSFAADWPQFKYWY
Ga0326728_1000723330	3300033402	Peat Soil	YYAEVIDLGPFDAPWIQDGEHLRYFWLRHRKRTYAADWPEFKSWH
Ga0326728_100599146	3300033402	Peat Soil	YYAEVIDLGPFDAPWIQDGEHLRYFWLRHRKRTYAADWPEFKYWY
Ga0326727_106963173	3300033405	Peat Soil	AEVVDLGPFDAPWIMDFEHHHYFWLGHRKRTYAEDWPQFKFWY
Ga0326727_107809031	3300033405	Peat Soil	TYAEVIDLGPIDAPWIMDHEHHHYFWLRHRKRPYADDWPQFKYRY
Ga0370514_009854_2044_2205	3300034199	Untreated Peat Soil	NDARDYTDRYAEVIDLGPFDNPWTMDFEHLHYFWLRHRKVPFAADWPTVKFWG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093081

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences