Metagenome Family F093048

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093048
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	58 residues
Representative Sequence	WSCGLPTVAMVTDRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPARDFLTGQVSH
Number of Associated Samples	66
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.28 %
% of genes from short scaffolds (< 2000 bps)	93.40 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.943 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (73.585 % of family members)
Environment Ontology (ENVO)	Unclassified (91.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (73.585 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.23% β-sheet: 0.00% Coil/Unstructured: 64.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF08751	TrwC	3.77
PF07940	Hepar_II_III	3.77
PF00106	adh_short	2.83
PF07992	Pyr_redox_2	2.83
PF00781	DAGK_cat	1.89
PF03631	Virul_fac_BrkB	1.89
PF00027	cNMP_binding	0.94
PF08734	GYD	0.94
PF00149	Metallophos	0.94
PF11838	ERAP1_C	0.94
PF12706	Lactamase_B_2	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	3.77
COG5360	Uncharacterized conserved protein, heparinase superfamily	General function prediction only [R]	3.77
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.89
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.94 %
Unclassified	root	N/A	49.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.94 %
Unclassified	root	N/A	49.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.94 %
Unclassified	root	N/A	49.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.96 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	17.92 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.60 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.89 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.94 %
Acidothermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	17.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.60 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.89 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.89 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.94 %
Acidothermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	17.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.60 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	1.89 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.89 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.94 %
Acidothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	17.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.60 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.89 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	1.89 %
Acidothermus cellulolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	0.94 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.06 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	17.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.60 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1.89 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	1.89 %
Acidothermus cellulolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	0.94 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300010048\|Ga0126373_10195170	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1958	Open in IMG/M
3300010048\|Ga0126373_10928744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	935	Open in IMG/M
3300010361\|Ga0126378_11411031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300010376\|Ga0126381_104781903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	521	Open in IMG/M
3300013105\|Ga0157369_10298075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1678	Open in IMG/M
3300016319\|Ga0182033_11891947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	542	Open in IMG/M
3300016341\|Ga0182035_12023083	Not Available	523	Open in IMG/M
3300016371\|Ga0182034_10523714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	992	Open in IMG/M
3300016387\|Ga0182040_10451894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300016422\|Ga0182039_11004617	Not Available	748	Open in IMG/M
3300016422\|Ga0182039_12033317	Not Available	529	Open in IMG/M
3300016445\|Ga0182038_10054589	All Organisms → cellular organisms → Bacteria	2690	Open in IMG/M
3300016445\|Ga0182038_10295923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1321	Open in IMG/M
3300016445\|Ga0182038_11145805	Not Available	692	Open in IMG/M
3300017942\|Ga0187808_10519301	Not Available	553	Open in IMG/M
3300017974\|Ga0187777_11339895	Not Available	527	Open in IMG/M
3300018058\|Ga0187766_10951304	Not Available	609	Open in IMG/M
3300027680\|Ga0207826_1182139	Not Available	570	Open in IMG/M
3300031543\|Ga0318516_10681880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300031543\|Ga0318516_10852174	Not Available	514	Open in IMG/M
3300031543\|Ga0318516_10878193	Not Available	505	Open in IMG/M
3300031544\|Ga0318534_10465036	Not Available	724	Open in IMG/M
3300031544\|Ga0318534_10569997	Not Available	644	Open in IMG/M
3300031544\|Ga0318534_10593491	Not Available	629	Open in IMG/M
3300031544\|Ga0318534_10788881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300031546\|Ga0318538_10722483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300031549\|Ga0318571_10041008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1340	Open in IMG/M
3300031561\|Ga0318528_10704063	Not Available	540	Open in IMG/M
3300031564\|Ga0318573_10426312	Not Available	713	Open in IMG/M
3300031572\|Ga0318515_10544809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	618	Open in IMG/M
3300031573\|Ga0310915_11136811	Not Available	542	Open in IMG/M
3300031640\|Ga0318555_10022717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2970	Open in IMG/M
3300031640\|Ga0318555_10555591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300031668\|Ga0318542_10484713	Not Available	642	Open in IMG/M
3300031680\|Ga0318574_10178171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1216	Open in IMG/M
3300031680\|Ga0318574_10533289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	688	Open in IMG/M
3300031680\|Ga0318574_10591896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300031681\|Ga0318572_10180120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1229	Open in IMG/M
3300031681\|Ga0318572_10285649	Not Available	973	Open in IMG/M
3300031682\|Ga0318560_10234182	Not Available	985	Open in IMG/M
3300031713\|Ga0318496_10065647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1904	Open in IMG/M
3300031713\|Ga0318496_10307712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	875	Open in IMG/M
3300031713\|Ga0318496_10403363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	756	Open in IMG/M
3300031713\|Ga0318496_10783503	Not Available	525	Open in IMG/M
3300031719\|Ga0306917_10053568	All Organisms → cellular organisms → Bacteria	2725	Open in IMG/M
3300031724\|Ga0318500_10425731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300031736\|Ga0318501_10261817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	917	Open in IMG/M
3300031736\|Ga0318501_10723908	Not Available	549	Open in IMG/M
3300031736\|Ga0318501_10726092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300031747\|Ga0318502_10248947	Not Available	1037	Open in IMG/M
3300031747\|Ga0318502_10333843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	895	Open in IMG/M
3300031748\|Ga0318492_10627005	Not Available	574	Open in IMG/M
3300031751\|Ga0318494_10024545	All Organisms → cellular organisms → Bacteria	3030	Open in IMG/M
3300031751\|Ga0318494_10864608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	530	Open in IMG/M
3300031764\|Ga0318535_10038608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1951	Open in IMG/M
3300031764\|Ga0318535_10229966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	830	Open in IMG/M
3300031764\|Ga0318535_10357557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300031764\|Ga0318535_10387048	Not Available	624	Open in IMG/M
3300031765\|Ga0318554_10145660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1343	Open in IMG/M
3300031765\|Ga0318554_10722041	Not Available	558	Open in IMG/M
3300031768\|Ga0318509_10281853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	929	Open in IMG/M
3300031768\|Ga0318509_10759148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300031769\|Ga0318526_10343472	Not Available	610	Open in IMG/M
3300031770\|Ga0318521_10439466	Not Available	780	Open in IMG/M
3300031778\|Ga0318498_10441513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300031781\|Ga0318547_10740952	Not Available	611	Open in IMG/M
3300031794\|Ga0318503_10237139	Not Available	592	Open in IMG/M
3300031795\|Ga0318557_10462096	Not Available	583	Open in IMG/M
3300031821\|Ga0318567_10851808	Not Available	516	Open in IMG/M
3300031845\|Ga0318511_10480927	Not Available	574	Open in IMG/M
3300031879\|Ga0306919_11428702	Not Available	522	Open in IMG/M
3300031893\|Ga0318536_10469131	Not Available	634	Open in IMG/M
3300031894\|Ga0318522_10427390	Not Available	502	Open in IMG/M
3300031896\|Ga0318551_10354255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	831	Open in IMG/M
3300031910\|Ga0306923_10041337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5038	Open in IMG/M
3300031910\|Ga0306923_11245867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300031941\|Ga0310912_10328638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1186	Open in IMG/M
3300031954\|Ga0306926_10526328	Not Available	1451	Open in IMG/M
3300031954\|Ga0306926_11103083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	938	Open in IMG/M
3300031954\|Ga0306926_11571438	Not Available	756	Open in IMG/M
3300031954\|Ga0306926_12239499	Not Available	607	Open in IMG/M
3300031981\|Ga0318531_10546509	Not Available	525	Open in IMG/M
3300032001\|Ga0306922_10601064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1165	Open in IMG/M
3300032008\|Ga0318562_10345386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	865	Open in IMG/M
3300032008\|Ga0318562_10474052	Not Available	726	Open in IMG/M
3300032008\|Ga0318562_10505585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300032009\|Ga0318563_10471927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300032039\|Ga0318559_10331947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300032041\|Ga0318549_10205064	Not Available	885	Open in IMG/M
3300032054\|Ga0318570_10352921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	670	Open in IMG/M
3300032064\|Ga0318510_10321794	Not Available	648	Open in IMG/M
3300032064\|Ga0318510_10342005	Not Available	629	Open in IMG/M
3300032065\|Ga0318513_10300090	Not Available	780	Open in IMG/M
3300032065\|Ga0318513_10683158	Not Available	503	Open in IMG/M
3300032066\|Ga0318514_10060284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300032066\|Ga0318514_10395266	Not Available	734	Open in IMG/M
3300032066\|Ga0318514_10669995	Not Available	552	Open in IMG/M
3300032066\|Ga0318514_10717141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300032068\|Ga0318553_10185225	Not Available	1084	Open in IMG/M
3300032068\|Ga0318553_10274643	Not Available	881	Open in IMG/M
3300032076\|Ga0306924_10240503	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2079	Open in IMG/M
3300032089\|Ga0318525_10002420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7281	Open in IMG/M
3300032089\|Ga0318525_10191748	Not Available	1051	Open in IMG/M
3300033290\|Ga0318519_10663126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	636	Open in IMG/M
3300033290\|Ga0318519_10751302	Not Available	598	Open in IMG/M
3300033290\|Ga0318519_10962239	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.06%
Host-Associated	Host-Associated	0.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.11%
Aquatic	Environmental → Aquatic	0.94%
Plants	Host-Associated → Plants	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.11%
Freshwater	Environmental → Aquatic → Freshwater	0.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.94%
Loam	Environmental → Terrestrial → Soil → Loam	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	91.51%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	73.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.77%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0126373_101951702	3300010048	Tropical Forest Soil	MVTNRCLTTSAPAAEVGAIERATRNILEMFARGPSGRVYPARDFMTGQVSH*
Ga0126373_109287442	3300010048	Tropical Forest Soil	MVTDRCLTTSPPAAEVRVIEGATRNILQTFARGPSGRVHPARDFLTGQVSH*
Ga0126378_114110312	3300010361	Tropical Forest Soil	MVTDRCLSTSPPAVVVRVIERATRNILRAFARGPSGRVHPARDFLTGQVSHWRRADA*
Ga0126381_1047819032	3300010376	Tropical Forest Soil	MVTDRCLTTSPPAVVVRVIERATRNILETFARGRSGRVHPAKDFLTGQVSHCCRANA*
Ga0157369_102980753	3300013105	Corn Rhizosphere	CLTTSPPGPEVRVIERATRNILETFARGPSGRVYPARDFLTGRVSH*
Ga0182033_118919471	3300016319	Soil	NRCLTTSPPAAEVSVIERATRNILQTFARGPAGRVHPATDFLTGQVSH
Ga0182035_120230831	3300016341	Soil	RCPTTSPPAAVVRVIKRATCTILQTFAQGPAGRVHPATDFLTGQVSH
Ga0182034_105237142	3300016371	Soil	EGWSCGLPSVAMVTNRCLTTSPPAAEVSVIERATRNILDSFARGPAGRIHPARDFLTGQVSH
Ga0182040_104518941	3300016387	Soil	TDRCLTTSPPAMVVRVIERATRNILQTFARGPSGRLHPATDFLTGQVTH
Ga0182039_110046171	3300016422	Soil	VAMVTNRCLTTSPPATEVAVIERATRTILETFARGPAGRVHPATDFLTGQVSH
Ga0182039_120333171	3300016422	Soil	AMVTDRCLTTSPPAAEVRVIERATRTILQTFARGPAGRVHPARDFLTGQVSH
Ga0182038_100545891	3300016445	Soil	GLPTVAMVTDRCLTTSPPAGEVKVIERATRNIIETFARGPAGRVHPARDFLTGQVSYWRRAGA
Ga0182038_102959231	3300016445	Soil	TIAMVTDRCPTISPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSR
Ga0182038_111458051	3300016445	Soil	CLTTFPPAAVVHVIERATRNILETFARGPSGRGHPATDFLTGQVSH
Ga0187808_105193012	3300017942	Freshwater Sediment	TNRCLTTSPPAAEVSVIERATHNILQTFARGPADRVHPARDFLTGQVSR
Ga0187777_113398951	3300017974	Tropical Peatland	AGVLNVGTEGWLCGLPTVAMVTNRCLTTSPPAAEVSVIERATHNILQTFARGPADRVHPARDFLTGQVSR
Ga0187766_109513041	3300018058	Tropical Peatland	LNVGTEGWSCGLPTVAMVTNRCLTTSPPVTEVRVIERATRNILETFARGPAGRLYPARDFLTGQVSH
Ga0207826_11821392	3300027680	Tropical Forest Soil	AMVTNRCLTTAPPATEVRVIERATRNILDTFARGPAGRLYPARDFLTGEVSR
Ga0318516_106818801	3300031543	Soil	NAGTQGWSCGLPTVAMVTDRCLSTSPPAVVVRVIERATRNILRAFARGPSGRVHPATDFLTGQVSR
Ga0318516_108521741	3300031543	Soil	GWLCGLPTVAMVTNRCLTTSPPATEVRVIERATRTILETFAAGPAGRVYPARDFLTGQVS
Ga0318516_108781932	3300031543	Soil	SRPAGPGVLNAGTQGWSCGLPTVAMVTNRCLTTTPPAAEVRVIERATRNILDTFARGPSGRVFPATDFLTGQVSH
Ga0318534_104650362	3300031544	Soil	GTENWSCGLPTVAMVTDRCLTTSPPAAEVRVIERATRTILQTFARGPAGRVHPARDFLTGQVSH
Ga0318534_105699971	3300031544	Soil	PTIAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318534_105934912	3300031544	Soil	VTDRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPARDFLTGQVSH
Ga0318534_107888811	3300031544	Soil	CGLPTVAMVTDRCLSTSPPAVVVRVIERATRNILEMFARGPSGRVHPARDFLTGQVSHWGRADA
Ga0318538_107224831	3300031546	Soil	TVAMVTDRCLTTSPPAMVVRVIERATRNILQTFARGPSGRLHPATDFLTGQVTH
Ga0318571_100410082	3300031549	Soil	LNVGTEGWLCGLPTVAMVTNRCLTTSPPATEVRVIERATRTILETFAAGPAGRVYPARDFLTGQVSH
Ga0318528_107040632	3300031561	Soil	VGTEGWSCGLPTVAMVTIRCLSTSPPAVVVRVIERATRNILETFARGPSGRVHPARDFLTGQVSLAPG
Ga0318573_104263121	3300031564	Soil	PTVAMVTDRCLTTSPPAGEVKVIERATRNIIETFARGPAGRVHPARDFLTGQVSYWRRAG
Ga0318515_105448091	3300031572	Soil	AASWAGVLNVGTEGWSCGLPTVAMVTDRCLTTSPPAAEVRVIERATRTILQTFARGPAGRVHPARDFLTGQVSH
Ga0310915_111368112	3300031573	Soil	GLPTVAMVTDRCPTTSPPAAEERVIERATRTILQTFARGPSGRVHPATDFLTGQVSH
Ga0318555_100227175	3300031640	Soil	PTVAMVTDRCLSTSPAAVVVRVIERATRNILEAFARGPSGRVHPARDFLTGQVSHWRRAD
Ga0318555_105555911	3300031640	Soil	VTDRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPATDFLTGQVSH
Ga0318542_104847131	3300031668	Soil	CGLPTVAMVTNRCLTTSPPAAEVTVIERATRNILETFARGPSGRGHPATDFLTGQVSH
Ga0318574_101781711	3300031680	Soil	LNAGTEGWSCGLPTVAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318574_105332892	3300031680	Soil	WSCGLPTVAMVTNRCPTTSPPVTEVRVIERATRNILETFARGPAGRIYPARDFLTGQVSH
Ga0318574_105918961	3300031680	Soil	LNVGTEGWSCGLPTVAMVTDRCLSTSRPAVVVRVIERATRNILRAFARGPSGRAHPATDFLTGQVSH
Ga0318572_101801203	3300031681	Soil	GVLDAGTEGWSCGLPTIAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRVHPATDFLTGQVSH
Ga0318572_102856492	3300031681	Soil	NRCLTTSPPAAEVTVIERATRTILETFARGPSGRVHPARDFLTGQISH
Ga0318560_102341823	3300031682	Soil	VGTQGWLCGLPTVAMVTNRCLTTSPPAAEVTVIERATRTILETFARGPSGRVHPARDFLTGQISH
Ga0318496_100656472	3300031713	Soil	MVTNRCQTTSPPATEVAVIERATRTILETFARGPAGRVHPATDFLTGQVSH
Ga0318496_103077122	3300031713	Soil	VGTEGWSCGLPTVAMVTNRCPTTSPPVTEVRVIERATRNILETFARGPAGRIYPARDFLTGQVSH
Ga0318496_104033632	3300031713	Soil	CRPTSPTMSRPAGPGVLNAGTQGWSCGLPTVAMVTNRCLTTTPPAAEVRVIERATRNILDTFARGPSGRVFPATDFLTGQVSH
Ga0318496_107835031	3300031713	Soil	VTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPARDFLTGQVSH
Ga0306917_100535681	3300031719	Soil	SWSCGLPTVAMVTDRCLTTSPPAGEVKVIERATRNIIETFARGPAGRVHPARDFLTGQVSYWRRAGA
Ga0318500_104257311	3300031724	Soil	AMVTDRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPATDFLTGQVSH
Ga0318501_102618172	3300031736	Soil	PTIAMVTNRCPTTSPPAAEVRVIKRATRTILQTFARGPAGRAHPATDFLTGQASH
Ga0318501_107239081	3300031736	Soil	PLVVTDAGTEGWSCGLPTVAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318501_107260922	3300031736	Soil	DRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPATDFLTGQVSH
Ga0318502_102489471	3300031747	Soil	VTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318502_103338431	3300031747	Soil	CGLPTVAMVTNRCLTTSPPAAEEKVIERATRNILQTFARGPAGRVHPATDFLTGQVSR
Ga0318492_106270051	3300031748	Soil	LNAGTEGWSCGLPTIAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPARDFLTGQVSH
Ga0318494_100245451	3300031751	Soil	VLDAGTESWSCGLPTVAMVTDRCLTTSPPAGEVKVIERATRNVLETFARGPSGRVHPATDFLTGQVSH
Ga0318494_108646081	3300031751	Soil	VTNRCLTTSPPAAEVSVIERATRNILQTFARGPAGRVHPATDFLTGQVSH
Ga0318535_100386081	3300031764	Soil	LPTVAMVTDRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318535_102299662	3300031764	Soil	AMVTNRCLTTTPPAAEVRVIERATRNILDTFARGPSGRVFPATDFLTGQVSH
Ga0318535_103575571	3300031764	Soil	NRCLTTSPPAAEVTVIERATRTILETFARGPSGRVHPARDFLTGQVSHWRRADA
Ga0318535_103870481	3300031764	Soil	NRCLTTFPPAAVVHVIERATRNILETFARGPSGRGHPATDFLTGQVSH
Ga0318554_101456601	3300031765	Soil	GWSCGLPTVAMVTDRCLSTSPAAVVVRVIERATRNILEAFARGPSGRVHPARDFLTGQVSHWRRADA
Ga0318554_107220411	3300031765	Soil	MVTDRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRVHPATDFLTGQVSH
Ga0318509_102818531	3300031768	Soil	TEGWLCGLPTVAMVTNRCLTTAPPAAEVSVIERATRNILDSFARGPAGRIHPARDFLTGQVSH
Ga0318509_107591482	3300031768	Soil	MVTDRCLSTSPPAVVVRVIERATRNILEMFARGPSGRVHPARDFLTGQVSHWGRADA
Ga0318526_103434721	3300031769	Soil	VAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRVHPATDFLTGQVSH
Ga0318521_104394662	3300031770	Soil	NVGTEGWLCGLPTVAMVTNRCLTTSPPATEVRVIERATRTILETFAAGPAGRVYPARDFLTGQVSH
Ga0318498_104415131	3300031778	Soil	ESWSCGLPTVAMVTDRCLTTSPPAMVVRVIERATRNILQTFARGPSGRLHPATDFLTGQVTH
Ga0318547_107409522	3300031781	Soil	QGWLCGLPTVAMVTNRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPARDFLTGQVSH
Ga0318503_102371391	3300031794	Soil	AMVTDRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318557_104620961	3300031795	Soil	MVTDRCLTTSPPAAEVRVIERATRTILQTFARGPAGRVHPARDFLTGQVSH
Ga0318567_108518081	3300031821	Soil	VLDVGTESWSCGLPTVAMVTDRCLTTSPPAGEVKVIERATRNIIETFARGPAGRVHPARDFLTGQVSYWRRAGA
Ga0318511_104809272	3300031845	Soil	WSCGLPTVAMVTDRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPARDFLTGQVSH
Ga0306919_114287021	3300031879	Soil	CPTTSPPAAEERVIERATRTILQTFARGPSGRVHPATDFLTGQVSH
Ga0318536_104691311	3300031893	Soil	MVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318522_104273901	3300031894	Soil	SGAGVLNVGTQGWNCGLPTVAMVTNRCLTTSPPAAEVTVIERATRTILETFARGPSGRVHPARDFLTGQISH
Ga0318551_103542552	3300031896	Soil	VGTEGWSCGLPTVAMVTNRCPTTSPPVTEVRVIERATRTILETFARGPAGRIYPARDFLTGQVSH
Ga0306923_100413375	3300031910	Soil	TTSPPAGEVKVIERATRNIIETFARGPAGRVHPARDFLTGQVSYWRRAGA
Ga0306923_112458672	3300031910	Soil	MSRPAGPGVLNAGTQGWSCGLPTVAMVTNRCLTTTPPAAEVRVIERATRNILDTFARGPSGRVFPATDFLTGQVSH
Ga0310912_103286381	3300031941	Soil	AGTEGWSCGLPTIAMVTDRCPTTSPPAAEVRVIKRATRTILQTFAQGPAGRVHPATDFLTGQVSH
Ga0306926_105263283	3300031954	Soil	CPTTSPPAAEVRVIERATRTILQTFAQGPAGRVHPATDFLTGQVSH
Ga0306926_111030832	3300031954	Soil	WLCGLPTVAMVTNRCLTTSPPAAEVRVIERATRNILETFARGPAGRVHPARDFLTGQVSH
Ga0306926_115714381	3300031954	Soil	CLTTSPPAAEVTVIERATRNILETFARGPSGRGHPATDFLTGQVSH
Ga0306926_122394991	3300031954	Soil	GTEGWSCGLPTIAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318531_105465091	3300031981	Soil	GWSCGLPTIAMVTNRCPTTSPPAAEVRVIERATRTILQTFARGPAGRVHPATDFLTGQVS
Ga0306922_106010642	3300032001	Soil	MVTNRCLTTSPPATEVAVIERATRTILETFARGPAGRVHPATDFLTGQVSH
Ga0318562_103453861	3300032008	Soil	GTEGWSCGLPTVAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQASH
Ga0318562_104740521	3300032008	Soil	GWLCGLPTVAMVTDRCPTTSPPAAEERVIERATRTILQTFARGPSGRVHPATDFLTGQVS
Ga0318562_105055851	3300032008	Soil	CGLPTVAMVTDRCLSTSRPAVVVRVIERATRNILRAFARGPSGRAHPATDFLTGQVSH
Ga0318563_104719271	3300032009	Soil	VTDRCLTTSPPAAEVRVIERATRTILQTFARGPAGRVHPARDFLTGQVSH
Ga0318559_103319471	3300032039	Soil	LPTVAMVTDRCLSTLPPAVVVRVIERATRNILEAFARGPSGRVHPARDFLTGQVSHWRRADA
Ga0318549_102050641	3300032041	Soil	GLPTVAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318570_103529211	3300032054	Soil	LNVGTEGWSCGLPTVAMVTNRCPTTSPPVTEVRVIERATRNILETFARGPAGRLYPARDFLTGQVSH
Ga0318510_103217942	3300032064	Soil	RCLTTAPPAAEVSVIERATRNILDSFARGPAGRIHPARDFLTGQVSH
Ga0318510_103420051	3300032064	Soil	TNRCLTTFPPAAVVHVIERATRNILETFARGPSGRGHPATDFLTGQVSH
Ga0318513_103000901	3300032065	Soil	VTDRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318513_106831581	3300032065	Soil	NRCLTTSPPAAEVRVIAQATRNIFEAFAQGPSGRVHPATDFLTGQVLH
Ga0318514_100602842	3300032066	Soil	SAAGVLNVGTEGWLCGLPTVAMVTNRCLTTAPPAAEVSVIERATRNILDSFARGPAGRIHPARDFLTGQVSH
Ga0318514_103952661	3300032066	Soil	LPTVAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPARDFLTGQVSH
Ga0318514_106699952	3300032066	Soil	NVGTQGWNCGLPTVAMVTNRCLTTSPPAAEVTVIERATRTILETFARGPSGRVHPARDFLTGQISH
Ga0318514_107171412	3300032066	Soil	GVLNEGTESWSCGLPTVAMVTDRCLTTSPPAMVVRVIERATRNILQTFARGPSGRLHPATDFLTGQVTH
Ga0318553_101852251	3300032068	Soil	WSCGLPTVAMVTDRCLTTSPPAGEVKVIERATRNIIETFARGPAGRVHPARDFLTGQVSYWRRAGA
Ga0318553_102746432	3300032068	Soil	GVLNAGTEGWLCGLPTVAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPARDFLTGQVSH
Ga0306924_102405031	3300032076	Soil	GLPTIAMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH
Ga0318525_100024207	3300032089	Soil	VGTQGWSCGLPTVAMVTNRCLTTSPPAAEVRVIERATRNILQTFARGPAGRVHPARDFLTGQVSYWRRAGA
Ga0318525_101917482	3300032089	Soil	LNVGTQGWLCGLPTVAMVTNRCLTTSPPAAEVTVIERATRTILETFARGPSGRVHPARDFLTGQISH
Ga0318519_106631261	3300033290	Soil	LPTVAMVTNRCPTTSPPVTEVRVIERATRNILETFARGPAGRIYPARDFLTGQVSH
Ga0318519_107513021	3300033290	Soil	MVTNRCLTTSPPATEVRVIERATRTILETFAAGPAGRVYPARDFLTGQVSH
Ga0318519_109622391	3300033290	Soil	AMVTNRCPTTSPPAAEVRVIERATRTILQTFAQGPAGRAHPATDFLTGQVSH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F093048

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences