Metagenome / Metatranscriptome Family F092915

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092915
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	61 residues
Representative Sequence	MNKQEKRLTAIIMALLFALLALGIAGSGDIEVEEDSARFYTEMVCKGHWPDYENRKPSCK
Number of Associated Samples	55
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.90 %
% of genes near scaffold ends (potentially truncated)	27.10 %
% of genes from short scaffolds (< 2000 bps)	81.31 %
Associated GOLD sequencing projects	43
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.682 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (40.187 % of family members)
Environment Ontology (ENVO)	Unclassified (56.075 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (57.944 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 44.32% β-sheet: 0.00% Coil/Unstructured: 55.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00145	DNA_methylase	13.08
PF01555	N6_N4_Mtase	5.61
PF08401	ArdcN	3.74
PF05766	NinG	3.74
PF11753	DUF3310	1.87
PF03237	Terminase_6N	1.87
PF12236	Head-tail_con	1.87
PF13673	Acetyltransf_10	0.93
PF01507	PAPS_reduct	0.93
PF09327	DUF1983	0.93
PF09588	YqaJ	0.93
PF12708	Pectate_lyase_3	0.93
PF02195	ParBc	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	13.08
COG0863	DNA modification methylase	Replication, recombination and repair [L]	5.61
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	5.61
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	5.61
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	3.74
COG4733	Phage-related protein, tail protein J	Mobilome: prophages, transposons [X]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
All Organisms	root	All Organisms	38.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
cellular organisms	root	All Organisms → cellular organisms	24.30 %
Viruses	superkingdom	All Organisms → Viruses	14.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	22.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	4.67 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.87 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	4.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.80 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.87 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.61 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	4.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.80 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.87 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.93 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.67 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.87 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.87 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.67 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	3.74 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.87 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.87 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.93 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.93 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.67 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.87 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	1.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Sulfitobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter	0.93 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.67 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.87 %
Magnetospirillum caucaseum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum caucaseum	1.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.87 %
unclassified Sulfitobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter	0.93 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.41 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4.67 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.87 %
Magnetospirillum caucaseum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum caucaseum	1.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.87 %
Sulfitobacter sp. SK011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp. SK011	0.93 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.93 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2022920000\|QLn_FQAYR3Y02RLGVJ	Not Available	508	Open in IMG/M
2199352018\|QLA_contig11041.11041	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300001419\|JGI11705J14877_10133540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	690	Open in IMG/M
3300001419\|JGI11705J14877_10141018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	663	Open in IMG/M
3300001748\|JGI11772J19994_1013950	All Organisms → Viruses → Predicted Viral	1292	Open in IMG/M
3300005346\|Ga0074242_10440309	Not Available	615	Open in IMG/M
3300005346\|Ga0074242_10444612	Not Available	25329	Open in IMG/M
3300005512\|Ga0074648_1067499	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300005512\|Ga0074648_1076040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1288	Open in IMG/M
3300005512\|Ga0074648_1170170	Not Available	636	Open in IMG/M
3300005613\|Ga0074649_1011037	All Organisms → cellular organisms → Bacteria	6293	Open in IMG/M
3300005613\|Ga0074649_1025991	All Organisms → Viruses → Predicted Viral	3103	Open in IMG/M
3300005613\|Ga0074649_1027944	All Organisms → Viruses → Predicted Viral	2922	Open in IMG/M
3300005613\|Ga0074649_1028899	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300005613\|Ga0074649_1087672	All Organisms → Viruses → Predicted Viral	1167	Open in IMG/M
3300005613\|Ga0074649_1110512	Not Available	971	Open in IMG/M
3300005613\|Ga0074649_1119067	Not Available	916	Open in IMG/M
3300006025\|Ga0075474_10081196	Not Available	1063	Open in IMG/M
3300006637\|Ga0075461_10195444	Not Available	607	Open in IMG/M
3300006802\|Ga0070749_10122296	Not Available	1528	Open in IMG/M
3300006802\|Ga0070749_10357935	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300006802\|Ga0070749_10635014	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300006916\|Ga0070750_10030555	Not Available	2682	Open in IMG/M
3300007344\|Ga0070745_1137739	Not Available	932	Open in IMG/M
3300007344\|Ga0070745_1153592	Not Available	871	Open in IMG/M
3300007344\|Ga0070745_1248566	Not Available	644	Open in IMG/M
3300007344\|Ga0070745_1267745	Not Available	614	Open in IMG/M
3300007346\|Ga0070753_1128958	Not Available	969	Open in IMG/M
3300007346\|Ga0070753_1291131	Not Available	585	Open in IMG/M
3300007538\|Ga0099851_1165892	Not Available	817	Open in IMG/M
3300007539\|Ga0099849_1010273	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	4197	Open in IMG/M
3300007540\|Ga0099847_1094549	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	913	Open in IMG/M
3300007540\|Ga0099847_1159385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum caucaseum	669	Open in IMG/M
3300007540\|Ga0099847_1164720	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	655	Open in IMG/M
3300007540\|Ga0099847_1244286	Not Available	516	Open in IMG/M
3300007541\|Ga0099848_1072438	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300007542\|Ga0099846_1215681	Not Available	673	Open in IMG/M
3300007542\|Ga0099846_1248805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum caucaseum	617	Open in IMG/M
3300007609\|Ga0102945_1012009	All Organisms → cellular organisms → Bacteria → Proteobacteria	2047	Open in IMG/M
3300007609\|Ga0102945_1039107	Not Available	963	Open in IMG/M
3300007640\|Ga0070751_1061758	All Organisms → cellular organisms → Bacteria → Proteobacteria	1613	Open in IMG/M
3300007960\|Ga0099850_1136611	Not Available	994	Open in IMG/M
3300007960\|Ga0099850_1222810	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300010316\|Ga0136655_1024821	Not Available	1975	Open in IMG/M
3300010316\|Ga0136655_1064882	Not Available	1125	Open in IMG/M
3300010316\|Ga0136655_1172131	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300010318\|Ga0136656_1173502	Not Available	730	Open in IMG/M
3300010368\|Ga0129324_10077404	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1467	Open in IMG/M
3300010368\|Ga0129324_10184576	Not Available	854	Open in IMG/M
3300010368\|Ga0129324_10248079	Not Available	711	Open in IMG/M
3300010368\|Ga0129324_10368599	Not Available	557	Open in IMG/M
3300010368\|Ga0129324_10389366	Not Available	539	Open in IMG/M
3300011258\|Ga0151677_1101485	Not Available	1559	Open in IMG/M
3300013010\|Ga0129327_10008757	Not Available	5598	Open in IMG/M
3300013010\|Ga0129327_10083071	Not Available	1578	Open in IMG/M
3300013010\|Ga0129327_10246140	Not Available	913	Open in IMG/M
3300017697\|Ga0180120_10058266	Not Available	1729	Open in IMG/M
3300017697\|Ga0180120_10119797	All Organisms → Viruses → Predicted Viral	1133	Open in IMG/M
3300017697\|Ga0180120_10190086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300017963\|Ga0180437_10927469	Not Available	625	Open in IMG/M
3300017971\|Ga0180438_10184731	Not Available	1673	Open in IMG/M
3300017971\|Ga0180438_10303225	Not Available	1230	Open in IMG/M
3300017971\|Ga0180438_10342139	Not Available	1143	Open in IMG/M
3300017971\|Ga0180438_10470890	Not Available	942	Open in IMG/M
3300017971\|Ga0180438_10574885	Not Available	836	Open in IMG/M
3300017987\|Ga0180431_10334147	All Organisms → Viruses → Predicted Viral	1096	Open in IMG/M
3300017989\|Ga0180432_10227488	All Organisms → Viruses → Predicted Viral	1469	Open in IMG/M
3300017991\|Ga0180434_10241863	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1432	Open in IMG/M
3300017991\|Ga0180434_10332317	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1187	Open in IMG/M
3300017991\|Ga0180434_10518578	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300018080\|Ga0180433_10319463	Not Available	1218	Open in IMG/M
3300018080\|Ga0180433_11116908	Not Available	573	Open in IMG/M
3300018682\|Ga0188851_1000122	Not Available	16677	Open in IMG/M
3300021378\|Ga0213861_10244783	Not Available	950	Open in IMG/M
3300022158\|Ga0196897_1001835	All Organisms → Viruses → Predicted Viral	2709	Open in IMG/M
3300022159\|Ga0196893_1021667	Not Available	594	Open in IMG/M
3300022169\|Ga0196903_1010139	Not Available	1173	Open in IMG/M
3300022176\|Ga0212031_1022170	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	994	Open in IMG/M
3300022200\|Ga0196901_1274692	Not Available	515	Open in IMG/M
3300024262\|Ga0210003_1014139	Not Available	5211	Open in IMG/M
3300025543\|Ga0208303_1002026	Not Available	7766	Open in IMG/M
3300025543\|Ga0208303_1017449	All Organisms → cellular organisms → Bacteria → Proteobacteria	2088	Open in IMG/M
3300025543\|Ga0208303_1024217	Not Available	1683	Open in IMG/M
3300025543\|Ga0208303_1033725	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1343	Open in IMG/M
3300025543\|Ga0208303_1051839	Not Available	994	Open in IMG/M
3300025543\|Ga0208303_1059439	Not Available	901	Open in IMG/M
3300025653\|Ga0208428_1078150	Not Available	959	Open in IMG/M
3300025655\|Ga0208795_1015508	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2581	Open in IMG/M
3300025671\|Ga0208898_1000446	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	32020	Open in IMG/M
3300025674\|Ga0208162_1094702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp. SK011	899	Open in IMG/M
3300025759\|Ga0208899_1066615	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1462	Open in IMG/M
3300025769\|Ga0208767_1171808	Not Available	762	Open in IMG/M
3300025889\|Ga0208644_1043407	All Organisms → Viruses → Predicted Viral	2560	Open in IMG/M
3300026097\|Ga0209953_1025925	Not Available	975	Open in IMG/M
3300031539\|Ga0307380_10627057	Not Available	920	Open in IMG/M
3300031539\|Ga0307380_11338591	Not Available	544	Open in IMG/M
3300031565\|Ga0307379_10179316	Not Available	2192	Open in IMG/M
3300031565\|Ga0307379_11553335	Not Available	524	Open in IMG/M
3300031566\|Ga0307378_11533047	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300031578\|Ga0307376_10166636	Not Available	1517	Open in IMG/M
3300031578\|Ga0307376_10332647	Not Available	1009	Open in IMG/M
3300031578\|Ga0307376_10430067	Not Available	864	Open in IMG/M
3300031578\|Ga0307376_10737684	Not Available	614	Open in IMG/M
3300031673\|Ga0307377_10948940	Not Available	582	Open in IMG/M
3300031673\|Ga0307377_10977083	Not Available	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	89.72%
Terrestrial	Environmental → Terrestrial	10.28%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	57.94%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	30.84%
Soil	Environmental → Terrestrial → Soil	10.28%
Freshwater	Environmental → Aquatic → Freshwater	0.93%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	57.01%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	18.69%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	12.15%
Clay	Environmental → Terrestrial → Soil → Clay	10.28%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.93%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	57.01%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	12.15%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	10.28%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	10.28%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	4.67%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	3.74%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.93%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	40.19%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	14.95%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	12.15%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	10.28%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	10.28%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	3.74%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.80%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.93%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.93%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.93%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2022920000	Saline water microbial communities from Qinghai Lake, Tibetan Plateau - High mountain lake (unassembled)	Environmental	Open in IMG/M
2199352018	Saline water microbial communities from Qinghai Lake, Tibetan Plateau -Sample 11630	Environmental	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007609	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental	Open in IMG/M
3300017987	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaG	Environmental	Open in IMG/M
3300017989	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaG	Environmental	Open in IMG/M
3300017991	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaG	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300022158	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)	Environmental	Open in IMG/M
3300022159	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v3)	Environmental	Open in IMG/M
3300022169	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026097	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
QL_na_13085700	2022920000	Saline Water	MNDKKMEKLTFIIMALLFALLALGIAGNGDIETEETQARVYSEMVCAGHWPDYEKQEANL
QLA_00402020	2199352018	Saline Water	MEKLTFIIMALLFALLALGIAGTGDLQEAQDQARVYNEMVCAGHWPDYENRKPTCQK
JGI11705J14877_101335401	3300001419	Saline Water And Sediment	KVEKLTFIIMALLFALLALGIAGNGDLQEAQDQAAFYNEMVCKGHWPDYEQRRPKCDTVQFVAE*
JGI11705J14877_101410181	3300001419	Saline Water And Sediment	MALLFALLALGIAGNGDLQEAQDQASFYNEMVCKGHWPDYENRRPKCDTVQFVAALRLLR
JGI11772J19994_10139504	3300001748	Saline Water And Sediment	MNDNKKVEKLTFIIMALLFALLALGIAGNGDLQEAQDQAAVYNEMVCDGAWPDYENRKPTCE*
Ga0074242_104403091	3300005346	Saline Water And Sediment	MSEDNKVQRLTLIIMALLFALLALGIAGNGDIEAEEDSARLYTEMVCKGHWPDYEQRRPSCDTVQSVAE*
Ga0074242_1044461212	3300005346	Saline Water And Sediment	MDDNKKVQQLTLILMALLFVLLALGIAGNGDIEVEEDSAELYIEMVCKGHWPDYENRNPSCG*
Ga0074648_10674993	3300005512	Saline Water And Sediment	MNDNKKVERLTFIIMALLFALLALGIAGNGDLQEAQDQASFYNEMVCKGHWPDYENRRPKCDTVQFVAALRLLR*
Ga0074648_10760404	3300005512	Saline Water And Sediment	MNDNKKVEKLTFIIMALLFALLALGIAGNGDLQEAQDQAAFYNEMVCKGHWPDYEQRRPKCDTVQFVAE*
Ga0074648_11701701	3300005512	Saline Water And Sediment	GNMNDNKKVEKLTFIIMALLFALLALGIAGNGDLQEAQDQAAVYNEMVCDGAWPDYENRKPTCE*
Ga0074649_10110379	3300005613	Saline Water And Sediment	MNKQEKRLTLIIMASLFVLLALGIAGNGDIEAEQDSARLYTEMVCKGSWPDYENRKPTCN
Ga0074649_10259914	3300005613	Saline Water And Sediment	MNKQEKRLTAIIMASLFVLLALGIAGNGDIEAEETQARVYTEMVCKGHWPDYENRKPTCN
Ga0074649_10279445	3300005613	Saline Water And Sediment	MNKQEKRLTAIIMASLFVLLALGIAGTGDIEAEETQARVYNEMVCAGHWPDYENRKPACN
Ga0074649_10288991	3300005613	Saline Water And Sediment	MSEDNKVQRLTLIIMALLFVLLALGIAGNGDIEAEEDSARLYTEMVCKGHWPDYEQRRPSCDTVQSVAE*
Ga0074649_10876724	3300005613	Saline Water And Sediment	MNKQEKRLTAIIMASLFVLLALGIAGNGDIEAEQDSARLYTEMVCKGSWPDYENRKPTCN
Ga0074649_11105124	3300005613	Saline Water And Sediment	MNDKKVRDLTLLIMGLLFALLVLGIAGEGDYQEAQDQAEFYDEMVCKGLWADYEGRNPKCD*
Ga0074649_11190674	3300005613	Saline Water And Sediment	MDDNKKVQQLTLILMALLFVLLALGIAGNGDIEVEEDSAEMYIEMVCKGHWPDYENRNPSCG*
Ga0075474_100811964	3300006025	Aqueous	MDDNKKVQQLTLILMALLLALLALGIAGNGDIEAEEDSAKVYAEMVCAGHWPDYENRNPKCN*
Ga0075461_101954442	3300006637	Aqueous	MNDNKKVERLTFIIMALMFALLALGIAGSGDYQEAQDQAEFYDEMVCKGAWPDYENRKPTCE*
Ga0070749_101222963	3300006802	Aqueous	MNKQEKRLTAIIMASLFVLLALGIAGSGDIEAEETQARVYTEMVCKGHWPDYEQRRPLCDTEVFAAE*
Ga0070749_103579352	3300006802	Aqueous	MNKQEKRLTLILMALLFALLALGIAGAGDIEAEEDSARFYTEMVCKGSWPDYENRKPACR
Ga0070749_106350142	3300006802	Aqueous	MNKQEKRLTLILMALLFALLALGIAGTGDIEAEEDSARFYTEMVCKGHWP
Ga0070750_100305556	3300006916	Aqueous	MDDNKKVQRLTLILMALLFALLALGIAGNGDIEAEEDSAKVYAEMVCAGYWPDYENRNPNCG*
Ga0070745_11377391	3300007344	Aqueous	MNKQEKQLYAIIMALLFALLALGIAGTGDIEVEEDSARMY
Ga0070745_11535922	3300007344	Aqueous	MNTQEKRLYAIIMALLFALLALGIAGTGDIEVEEDSARMYNEMVCAGHWPDYENRKPKCN
Ga0070745_12485663	3300007344	Aqueous	VIDDNKKVQRLTAIIMALLFALLALGIAGSGDIEAEEDSARFYNEMVCKGHWPDYENRKPACK*
Ga0070745_12677451	3300007344	Aqueous	MNKQEKRLTAIIMASLFVLLALGIAGSGDIEAAETQARVYTEMVCKGHWPDYEQRRPLCDTEVFAAE*
Ga0070753_11289581	3300007346	Aqueous	MNKQEKQLYAIIMALLFALLALGIAGTGDIEAEEDSARFYTEMVCKGH
Ga0070753_12911311	3300007346	Aqueous	LRLLLEGNTMNKQEKRLTAIIMALLFALLALGIAGTGDIEAEQDSARMYTEMVCKGAWPDYENRRPSCDTVQFVAE*
Ga0099851_11658921	3300007538	Aqueous	MNKQEKQLTAIIMALLFALLALGIAGSGDIEVEEDSARMYNEMVCAGHWPDYENRNPKC
Ga0099849_10102733	3300007539	Aqueous	MNKQEKRLTAIIMALLFALLALGIAGSGDIEVEEDSARFYTEMVCKGHWPDYENRKPACK
Ga0099847_10825722	3300007540	Aqueous	MALLFVVFALGLAGKGDLQEAQDQAAFYDEMVCKGAWPDYEGRKPKCN*
Ga0099847_10945492	3300007540	Aqueous	MNDKKMEKLTFIIMAILFALLALGIAGTGDLQEAQDQARVYNEMVCAGHWPDYENRRPTCE*
Ga0099847_11593851	3300007540	Aqueous	MNKQEKQLTAIIMALLFALLALGIAGSGDIEVEEDSARMYNEMVCKGHWPDYDGRKPQCDTVQFVAE*
Ga0099847_11647203	3300007540	Aqueous	MMNDSKKMERLTFVIMALLFVVFALGLAGKGDLQEAQDQASFYDEMVCKGAWPDYENRKPTCE*
Ga0099847_12442861	3300007540	Aqueous	MNKQEKRLTAIIMALLFALLALGIAGAGDIEVEEDSARMYNEMVCKGHWPDYEGRNPQCDTGVFVAE*
Ga0099848_10724382	3300007541	Aqueous	MNKQEKRLIAIIMALLFALLALGIAGSGDIEVEEDSARMYNEMVCKGHWPDYEGRNPQCNTVQFVAE*
Ga0099846_12156812	3300007542	Aqueous	MNDKKMEKLTFIIMAILFALLALGIAGTGDLQEAQDQARVYNEMVCAGHWPDYENRKSTCE*
Ga0099846_12488052	3300007542	Aqueous	MNKQEKRLTAIIMALLFALLALGIAGSGDIEVEEDSARMYNEMVCKGHWPDYDGRKPQCDTVQFVAE*
Ga0102945_10120091	3300007609	Pond Water	DNKKVERLTFIIMALMFALLALGIAGSGDYQEAQDQADFYDEMVCKGLWGDYKGRKPSCDTAQYVVE*
Ga0102945_10391071	3300007609	Pond Water	MNDKKVRDLTLLLMALLLAFLALGIAGEGDYQEAKDQAQLYDEMVCKGLWPDYEGRKPQCD*
Ga0070751_10617583	3300007640	Aqueous	TAIIMALLFALLALGIAGTGDIEAEQDSARMYTEMVCKGAWPDYENRRPSCDTVQFVAE*
Ga0099850_11366113	3300007960	Aqueous	LTINTQEKRLYATIMTLLFALLALGIAGSGDIKVEEDSARMYNEMVCKGHWPDYENRKPKCN*
Ga0099850_12228102	3300007960	Aqueous	MSDNKKVERLTFIIMALMFALLALGIAGSGDYQEAQDQADFYDEMVCKGLWGDYKGRKPLCDTAQYVAE*
Ga0136655_10248213	3300010316	Freshwater To Marine Saline Gradient	MSDSKKMERLTFVIMALLFVVFALGLAGKGDLQEAQDQAAFYDEMVCKGAWPDYEGRKPKCN*
Ga0136655_10648821	3300010316	Freshwater To Marine Saline Gradient	MSNQEKRLTAIIMALLFAVLALGIAGNGDIEAEEDSARMYTEMVCKGHWPDYEQRRPKCDTVQFVAE*
Ga0136655_11721312	3300010316	Freshwater To Marine Saline Gradient	QEKRLTAIIMALLFALLALGIAGSGDIEVEEDSARMYNEMVCKGHWPDYEGRNPQCDTGVFVAE*
Ga0136656_11735021	3300010318	Freshwater To Marine Saline Gradient	EKRLTAIIMALLFALLALGIAGSGDIEVEEDSARFYTEMVCKGHWPDYENRKPACK*
Ga0129324_100774042	3300010368	Freshwater To Marine Saline Gradient	MNKQEKRLIAIIMALLFALLALGIAGTGDIEAEQDSAKFYTEMVCAGHWPDYENRKPACK
Ga0129324_101416152	3300010368	Freshwater To Marine Saline Gradient	VIMALLFVVFALGLAGKGDLQEAQDQAAFYDEMVCKGAWPDYEGRKPKCN*
Ga0129324_101845763	3300010368	Freshwater To Marine Saline Gradient	MNDKKVRDMALLLMGLLFALLVLGIAGEGDYQEAQDQAEFYDEMVCKGLWGDYEGRNPKCD*
Ga0129324_102480793	3300010368	Freshwater To Marine Saline Gradient	MSNQEKRLTAIIMALLFAVLALGIAGNGDIEAEEDSARMYTEMVCKGAWPDYEGRKPECN
Ga0129324_103685992	3300010368	Freshwater To Marine Saline Gradient	MNDSKKMERLTFVIMALLFVVFALGLAGKGDLQEAQDQAKVYNEMVCAGHWPDYENRKPTCE*
Ga0129324_103893662	3300010368	Freshwater To Marine Saline Gradient	MSDSKKMERLTFVIMALLFVVFALGLAGKGDLQEAQDQAAFYDEMVCKGAWP
Ga0151677_11014852	3300011258	Marine	MDDNKKVQRLTLILMASLFVLLALGIAGNGDIEAEEDSARMYNEMVCAGHWPDYEGRKPSCDTAQSVAE*
Ga0129327_100087576	3300013010	Freshwater To Marine Saline Gradient	MNDSKKMERLTFVIMALLFVVFALGLAGKGDLQEAQDQASFYDEMVCKGAWPDYENRKPTCE*
Ga0129327_100830715	3300013010	Freshwater To Marine Saline Gradient	MNKQEKRLTAIIMASLFLLLALGIAGTGDIEAEQDSARFYNEMVCAGHWPDYENRKPACK
Ga0129327_102461402	3300013010	Freshwater To Marine Saline Gradient	MNKQEKRLTAIIMALLFALLALGIAGSGDIEAEQDSAKFYTEMVCAGHWPDYENRKPAC
Ga0180120_100582662	3300017697	Freshwater To Marine Saline Gradient	MSDSKKMERLTFVIMALLFVVFALGLAGKGDLQEAQDQAAFYDEMVCKGAWPDYEGRKPKCN
Ga0180120_101197972	3300017697	Freshwater To Marine Saline Gradient	MNDNKKVERLTFIIMALLFVVFALGLAGKGDLQEAQDQASFYDEMVCKGAWPDYENRKPTCE
Ga0180120_101900862	3300017697	Freshwater To Marine Saline Gradient	MSNQEKRLTAIIMALLFAVLALGIAGNGDIEAEEDSARMYTEMVCKGHWPDYEQRRPKCDTVQFVAE
Ga0180437_109274691	3300017963	Hypersaline Lake Sediment	MNKQEKRLTLILMALLFALLALGIAGAGDIEAEEDSARFYTEMVCKGSWPDYENRKPACS
Ga0180438_101847312	3300017971	Hypersaline Lake Sediment	MSRREKQITAGILLALTFLIGLGIAGTGDIEAEQDSARMYTEMVCKGAWPDYENRRPSCDTVQYVAE
Ga0180438_103032252	3300017971	Hypersaline Lake Sediment	MNTQEKRLYAIIMALLFAVLALGIAGSGDIEAEQDSARLYNEMVCAGNWPDYENRRPQCDTVQSVAE
Ga0180438_103421396	3300017971	Hypersaline Lake Sediment	MNTQEKRLYAIIMALLFALLALGIAGNGDIEAEEDSARLYTEMVCKGHWPDYENRKPSCK
Ga0180438_104708901	3300017971	Hypersaline Lake Sediment	QHRRLTMNKQEKRLTAIIMALLFALLALGIAGTGDIEVEEDSARMYNEMVCAGHWPDYENRKPKCN
Ga0180438_105748851	3300017971	Hypersaline Lake Sediment	MDDSKKVQRLTLILMALLFALLALGIAGTGDIEAEEDSAKVYAEMVCAGHWPDYEN
Ga0180431_103341471	3300017987	Hypersaline Lake Sediment	MNTQEKRLYAIIMALLFAVLALGIAGTGDIEAEEDSARLYNEMVCKGAWPDYENRKPACK
Ga0180432_102274886	3300017989	Hypersaline Lake Sediment	MNTQEKRLYAIIMALLFAVLALGIAGTGDIEAEEDSARMYTEMVCAGHWPDYENRKPTCK
Ga0180434_102418634	3300017991	Hypersaline Lake Sediment	MDDKKVQRLTLILMALLFALLALGIAGSGDIEAEQDSARLYNEMVCKGAWPDYENRRPSCDTVQSVQE
Ga0180434_103323172	3300017991	Hypersaline Lake Sediment	MNTQEKRLYAIIMALLFALLALGIAGSGDIEAEQDSVRLYNEMVCKGAWPDYENRKPACK
Ga0180434_105185781	3300017991	Hypersaline Lake Sediment	RLYAIIMALLFAVLALGIAGIGDIEAEEDSARMYNEMVCKGHWPDYENRRPSCDTVQSVA
Ga0180433_103194634	3300018080	Hypersaline Lake Sediment	MNTQEKRLYAIIMALLFAVLALGIAGSGDIEAEQDSARLYNEMVCAGNWPDY
Ga0180433_111169082	3300018080	Hypersaline Lake Sediment	MNKQEKRLTLILMALLFALLALGIAGSGDIEVEEDSARFYTEMVCAGHWPDYENRKPACS
Ga0188851_10001226	3300018682	Freshwater Lake	MKAINNKKARDLILPIMALLFALLALGMAGDGDYQEAQDQATFYNEMVCKGAWPDYENRRPTCE
Ga0213861_102447832	3300021378	Seawater	MDDDKKVQRLTLILMALLFALLAFGIAGNGDIEAEEDSAKVYAEMVCAGYWPDYENRNPNCG
Ga0196897_10018356	3300022158	Aqueous	MDDNKKVQQLTLILMALLLALLALGIAGNGDIEAEEDSAKVYAEMVCAGHWPDYENRN
Ga0196893_10216672	3300022159	Aqueous	KILMALLLALLALGIAGNGDIEAEEDSAKVYAEMVCAGHWPDYENRNPKCN
Ga0196903_10101393	3300022169	Aqueous	MNKQEKRLTAIIMASLFLLLALGIAGTGDIEAEQDSAKFYTEMVCAGHWPDYENRKPACK
Ga0212031_10221701	3300022176	Aqueous	MNKQEKRLTAIIMASLFLLLALGIAGTGDIEAEQDSARFYNEMVCAGHWPDYENRKPSCK
Ga0196901_12746921	3300022200	Aqueous	MNDKKMEKLTFIIMAILFALLALGIAGTGDLQEAQDQARVYNEMVCAGHWPDYEGRKPKC
Ga0210003_10141398	3300024262	Deep Subsurface	MNKQEKRLTAIIMASLFVLLALGIAGNGDIEAEEDSARLYTEMVCKGSWPDYENRNPTCN
Ga0208303_10020266	3300025543	Aqueous	MNDKKMEKLTFIIMAILFALLALGIAGTGDLQEAQDQARVYNEMVCAGHWPDYENRRPTC
Ga0208303_10174493	3300025543	Aqueous	MNKQEKQLTAIIMALLFALLALGIAGSGDIEVEEDSARMYNEMVCKGHWPDYDGRKPQCDTVQFVAE
Ga0208303_10242174	3300025543	Aqueous	MNKQEKRITAIIMASLFVLLALGIAGNGDIEAEETQAKVYNEMVCAGHWPDYENRKPACN
Ga0208303_10337252	3300025543	Aqueous	MMNDSKKMERLTFVIMALLFVVFALGLAGKGDLQEAQDQAAFYDEMVCKGAWPDYEGRKPKCN
Ga0208303_10518391	3300025543	Aqueous	MNKQEKRLTAIIMALLFALLALGIAGAGDIEVEEDSAKMYNEMVCKGHWPDYENRKPTCK
Ga0208303_10594393	3300025543	Aqueous	MNKQEKRLTAIIMALLFALLALGIAGSGDIEVEEDSAKFYTEMVCKGHWPDYENRKPACK
Ga0208428_10781504	3300025653	Aqueous	MDDNKKVQQLTLILMALLLALLALGIAGNGDIEAEEDSAKVYAEMVCAGHWPDYENRNPK
Ga0208795_10155084	3300025655	Aqueous	MNKQEKRLTAIIMALLFALLALGIAGTGDIEAEQDSAKFYTEMVCAGHWPDYENRKPACK
Ga0208898_100044637	3300025671	Aqueous	MDDNKKVQQLTLILMALLLALLALGIAGNGDIEAEEDSAKVYAEMVCAGHWPDYENRNPKCN
Ga0208162_10947021	3300025674	Aqueous	MNKQEKRLTAIIMALLFALLALGIAGSGDIEVEEDSARFYTEMVCKGHWPDYENRKPSCK
Ga0208899_10666151	3300025759	Aqueous	MDDNKKVQRLTLILMALLFALLALGIAGNGDIEAEEDSAKVYAEMVCAGYWPDYENRN
Ga0208767_11718084	3300025769	Aqueous	KKVQRLTLILMALLFALLALGIAGNGDIEAEEDSAKVYAEMVCAGYWPDYENRNPNCG
Ga0208644_10434075	3300025889	Aqueous	MNKQEKQLYAIIMALLFALLALGIAGTGDIEAEEDSARFYNEMVCKGHWPDYENRKPACK
Ga0209953_10259251	3300026097	Pond Water	ILRGVLMNDKKVRDLTLLLMALLLAFLALGIAGEGDYQEAKDQAQLYDEMVCKGLWPDYEGRKPQCD
Ga0307380_106270572	3300031539	Soil	MNDNKKVERLTFIIMALLFVVFALGIAGKGDLQEAQDQAAFYDEMVCKGHWPDYENRKPTCN
Ga0307380_113385912	3300031539	Soil	MNKQEKRLTAIIMASLFVLLALGIAGNGDIEAEEDSARLYTEMVCKGSWPDYENRKPTCK
Ga0307379_101793167	3300031565	Soil	MNDNKKVERLTFIIMALLFVVFALGIAGKGDLQEAQDQAAFYNEMVCKGAWPDYENRKPTCN
Ga0307379_115533352	3300031565	Soil	MDDNKKVQQLTLILMALLFVLLALGIAGNGDIEAEQDSAKVYTEMVCKGYWPDYEQRRPSCDTVQSVAE
Ga0307378_115330472	3300031566	Soil	MALLFVLLALGIAGNGDIEAEQDSAKVYTEMVCKGYWPDYEQRRPSCDTVQSVAE
Ga0307376_101666365	3300031578	Soil	MDDNKKVERLTFIIMALLFVVFALGIAGNGDIEAEEDSAKVYTEMVCKGHWPDYEGRKPK
Ga0307376_103326472	3300031578	Soil	MNDNKKVERLTFIIMALLFALLALGIAGNGDIEAEEDSARLYTEMVCKGSWPDYEGRKPSCN
Ga0307376_104300672	3300031578	Soil	MDDNKKVQQLTLILMALLFVLLALGIAGNGDIEAEEDSARLYTEMVCKGSWPDYENRKPTCK
Ga0307376_107376842	3300031578	Soil	MSENKKVERLTFIIMALMFALLALGIAGSGDYQEAQDQAEFYDEMVCKGLWGDYKGRKPSCDTAQYVAE
Ga0307377_109489401	3300031673	Soil	RLTLIIMASLFVLLALGIAGNGDIEAEEDSARLYTEMVCKGSWPDYENRKPTCK
Ga0307377_109770832	3300031673	Soil	MNDKKVRDLTLLLMALLFALLALGIAGEGDYQEAQDQAQLYDEMVCKGLWGDYEGRKPKC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092915

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences