Metagenome / Metatranscriptome Family F092903

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092903
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	99 residues
Representative Sequence	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Number of Associated Samples	101
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.16 %
% of genes near scaffold ends (potentially truncated)	30.84 %
% of genes from short scaffolds (< 2000 bps)	85.05 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.299 % of family members)
Environment Ontology (ENVO)	Unclassified (30.841 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.075 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 47.15% Coil/Unstructured: 52.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
b.170.1.1: WSSV envelope protein-like	d2ed6a1	2ed6	0.65591
b.21.1.1: Adenovirus fiber protein 'knob' domain	d1h7za_	1h7z	0.65494
b.121.6.1: Papovaviridae-like VP	d5y9ea_	5y9e	0.64109
b.2.2.2: Cellulose-binding domain family III	d2vo8a1	2vo8	0.63816
b.21.1.0: automated matches	d2j2ja_	2j2j	0.63804

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01427	Peptidase_M15	8.41
PF02954	HTH_8	1.87
PF14235	DUF4337	1.87
PF08241	Methyltransf_11	0.93
PF00106	adh_short	0.93
PF03729	DUF308	0.93
PF00177	Ribosomal_S7	0.93
PF13561	adh_short_C2	0.93
PF08734	GYD	0.93
PF07452	CHRD	0.93
PF00970	FAD_binding_6	0.93
PF01068	DNA_ligase_A_M	0.93
PF06230	LpxI_C	0.93
PF00348	polyprenyl_synt	0.93
PF01148	CTP_transf_1	0.93
PF03098	An_peroxidase	0.93
PF01738	DLH	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	8.41
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.93
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.93
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.93
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.93
COG3494	Uncharacterized conserved protein, DUF1009 family	Function unknown [S]	0.93
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.93
COG0049	Ribosomal protein S7	Translation, ribosomal structure and biogenesis [J]	0.93

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	88.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.67 %
Unclassified	root	N/A	1.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	88.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.87 %
Unclassified	root	N/A	1.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	88.79 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.87 %
Unclassified	root	N/A	1.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.87 %
Unclassified	root	N/A	1.87 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	88.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.87 %
Unclassified	root	N/A	1.87 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17270723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1387	Open in IMG/M
2228664022\|INPgaii200_c1015768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300000550\|F24TB_13401341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1284	Open in IMG/M
3300000789\|JGI1027J11758_12314212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300000955\|JGI1027J12803_103896167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300000955\|JGI1027J12803_104215834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	935	Open in IMG/M
3300000955\|JGI1027J12803_104333775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300001431\|F14TB_100424548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2382	Open in IMG/M
3300001867\|JGI12627J18819_10102035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1184	Open in IMG/M
3300004463\|Ga0063356_100093998	All Organisms → cellular organisms → Bacteria	3224	Open in IMG/M
3300004479\|Ga0062595_100538341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300004803\|Ga0058862_12765122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300005166\|Ga0066674_10114056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1261	Open in IMG/M
3300005175\|Ga0066673_10050292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2099	Open in IMG/M
3300005179\|Ga0066684_10173050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1383	Open in IMG/M
3300005187\|Ga0066675_10574517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	846	Open in IMG/M
3300005290\|Ga0065712_10452149	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300005332\|Ga0066388_100268241	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300005336\|Ga0070680_100559018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	981	Open in IMG/M
3300005440\|Ga0070705_101017563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300005451\|Ga0066681_10431196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	809	Open in IMG/M
3300005468\|Ga0070707_100005954	All Organisms → cellular organisms → Bacteria	11376	Open in IMG/M
3300005471\|Ga0070698_101800037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300005518\|Ga0070699_100641957	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300005536\|Ga0070697_100288851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1408	Open in IMG/M
3300005555\|Ga0066692_10049128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2337	Open in IMG/M
3300005566\|Ga0066693_10210257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300005576\|Ga0066708_10127580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1541	Open in IMG/M
3300005587\|Ga0066654_10066364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1647	Open in IMG/M
3300005764\|Ga0066903_101807823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1167	Open in IMG/M
3300005764\|Ga0066903_104930935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300006031\|Ga0066651_10009861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3837	Open in IMG/M
3300006794\|Ga0066658_10372746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	768	Open in IMG/M
3300006796\|Ga0066665_10710111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300009012\|Ga0066710_102320720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300009038\|Ga0099829_10503703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300009088\|Ga0099830_10857614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300009137\|Ga0066709_104394439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300010046\|Ga0126384_10712724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	890	Open in IMG/M
3300010321\|Ga0134067_10465969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300010325\|Ga0134064_10028834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1618	Open in IMG/M
3300010336\|Ga0134071_10643731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300010376\|Ga0126381_101170207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1111	Open in IMG/M
3300011271\|Ga0137393_11791830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300012189\|Ga0137388_10997567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300012199\|Ga0137383_11099026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300012209\|Ga0137379_10374676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1333	Open in IMG/M
3300012211\|Ga0137377_10274531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1618	Open in IMG/M
3300012285\|Ga0137370_10010527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4398	Open in IMG/M
3300012350\|Ga0137372_10376109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1081	Open in IMG/M
3300012354\|Ga0137366_10150050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1755	Open in IMG/M
3300012356\|Ga0137371_10142761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1876	Open in IMG/M
3300012357\|Ga0137384_10596337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300012685\|Ga0137397_11191386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012951\|Ga0164300_10018077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2387	Open in IMG/M
3300012972\|Ga0134077_10146997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	939	Open in IMG/M
3300012975\|Ga0134110_10134029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1017	Open in IMG/M
3300012976\|Ga0134076_10498452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300013105\|Ga0157369_11024085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	845	Open in IMG/M
3300015158\|Ga0167622_1008286	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2757	Open in IMG/M
3300015357\|Ga0134072_10453851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300015359\|Ga0134085_10048139	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1700	Open in IMG/M
3300015371\|Ga0132258_12715234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1235	Open in IMG/M
3300016357\|Ga0182032_10031699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3236	Open in IMG/M
3300017659\|Ga0134083_10183516	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	858	Open in IMG/M
3300017970\|Ga0187783_11182933	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300017999\|Ga0187767_10244498	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300018027\|Ga0184605_10034977	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300018061\|Ga0184619_10164927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1013	Open in IMG/M
3300018071\|Ga0184618_10153175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	943	Open in IMG/M
3300018433\|Ga0066667_10487427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1013	Open in IMG/M
3300018482\|Ga0066669_11057099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300019881\|Ga0193707_1151821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300020579\|Ga0210407_10579502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	875	Open in IMG/M
3300020580\|Ga0210403_10263848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1413	Open in IMG/M
3300021080\|Ga0210382_10055506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1569	Open in IMG/M
3300021344\|Ga0193719_10103835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1235	Open in IMG/M
3300021404\|Ga0210389_10559614	Not Available	899	Open in IMG/M
3300021560\|Ga0126371_11173638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	905	Open in IMG/M
3300022467\|Ga0224712_10561980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300022756\|Ga0222622_10716702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300025910\|Ga0207684_10493455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1050	Open in IMG/M
3300025910\|Ga0207684_10646940	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300025912\|Ga0207707_10257579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1514	Open in IMG/M
3300025922\|Ga0207646_10000586	All Organisms → cellular organisms → Bacteria → Acidobacteria	47556	Open in IMG/M
3300026308\|Ga0209265_1030327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1673	Open in IMG/M
3300026314\|Ga0209268_1012421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3364	Open in IMG/M
3300026327\|Ga0209266_1272714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300026334\|Ga0209377_1070541	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1504	Open in IMG/M
3300026342\|Ga0209057_1010558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5771	Open in IMG/M
3300026524\|Ga0209690_1158953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300026528\|Ga0209378_1032832	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2710	Open in IMG/M
3300026530\|Ga0209807_1134576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	975	Open in IMG/M
3300026530\|Ga0209807_1166873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	821	Open in IMG/M
3300027846\|Ga0209180_10282014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300028828\|Ga0307312_10259418	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1126	Open in IMG/M
3300031231\|Ga0170824_107881203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300031421\|Ga0308194_10100604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	830	Open in IMG/M
3300031446\|Ga0170820_16540855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300031573\|Ga0310915_10227318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1310	Open in IMG/M
3300031720\|Ga0307469_11626212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300031744\|Ga0306918_10553859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300031946\|Ga0310910_10721483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	787	Open in IMG/M
3300032076\|Ga0306924_11664395	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300032205\|Ga0307472_101209746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	722	Open in IMG/M
3300032770\|Ga0335085_10365663	Not Available	1686	Open in IMG/M
3300032770\|Ga0335085_11690739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.65%
Aquatic	Environmental → Aquatic	4.67%
Plants	Host-Associated → Plants	3.74%
Human	Host-Associated → Human	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.65%
Sediment	Environmental → Aquatic → Sediment	3.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Digestive System	Host-Associated → Human → Digestive System	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.03%
Loam	Environmental → Terrestrial → Soil → Loam	15.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.93%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.93%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.93%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02279330	2088090014	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
INPgaii200_10157682	2228664022	Soil	MANVSYWQTSWVDSGETGLLPGQEHYWTMWGFGYGDAVAVTAAPLNSDAGDQILMVKDVQTEADPSGGRRFFFTVRNTGPVRAIGYGLNFSFIAA
F24TB_134013414	3300000550	Soil	RLVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA*
JGI1027J11758_123142122	3300000789	Soil	MASVSYWQTSWVDSGETGLLPGQEHYWTMWGFGYGDAVAVTAAPLNSDAGDQILIVKDVQTEADPSGGRRFFFTVRNTGPVRAIGYGLNFSFIAA*
JGI1027J12803_1038961671	3300000955	Soil	MANVSYWQTSWVDSGETGLLPGQEHYWTMWGFGYGDAVAVTAAPLNSDAGDQILMVKDVQTEADPSGGRRFFFTVRNTGPVRAIGYGLNFSFIAA*
JGI1027J12803_1042158341	3300000955	Soil	WRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVTP*
JGI1027J12803_1043337751	3300000955	Soil	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSSAGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVG
F14TB_1004245485	3300001431	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSSVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA*
JGI12627J18819_101020353	3300001867	Forest Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFS
Ga0063356_1000939981	3300004463	Arabidopsis Thaliana Rhizosphere	VANISYWQSSWVDQGERGLLPGEEHHWVMWGFGYGDAIGLTVAPLNSFAGDQALLAKDLQTEADPNGGRRLLFTVRNTGPVRVLGYGFNFSFISA*
Ga0062595_1005383412	3300004479	Soil	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSSAGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA*
Ga0058862_127651221	3300004803	Host-Associated	ANISYWQASWVDAGETGLLPGQEHNWVMWGFGYGDAVAVTAAPLNSDAGDQILAVQNIQSEADGSGDRRLYFSVRNTGPTRAIAYGLNFSFISA*
Ga0066674_101140561	3300005166	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066673_100502921	3300005175	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIG
Ga0066684_101730503	3300005179	Soil	VLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066675_105745172	3300005187	Soil	KARRHRWGSAGKPQKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0065712_104521491	3300005290	Miscanthus Rhizosphere	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGL
Ga0066388_1002682412	3300005332	Tropical Forest Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVTP*
Ga0070680_1005590182	3300005336	Corn Rhizosphere	MANISYWQASWVDAGETGLLPGQEHNWVMWGFGYGDAVAVTAAPLNSDAGDQILAVQNIQSEADGSGDRRLYFSVRNTGPTRAIAYGLNFSFISA*
Ga0070705_1010175631	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSF
Ga0066681_104311961	3300005451	Soil	KRFRKARRHRWGSAGKPQKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0070707_1000059546	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MANVSYWYASWVDAGETGLLPGYEHYWVMTGFGPGDAIAVTAVPLNSDAGDQALMVKDSQTEADPSGGRRFFFTIRNTGPIRAIGYGMNFSFVSA*
Ga0070698_1018000371	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAERLVVANVSYWHASWVDSGETGLLPGQEHYWVMWGFGFLDVLAVTPGPLNSDEGDQILMVKDLRSEADSSGGRRLFFTVRNTGPVRAIGYGLNFSFVSE*
Ga0070699_1006419571	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MATTSYWFGYWVSSDEVGLQTGQEHNWIMWGFGYGDAVTVTAHPLNSFAGDSILMVKDVQVEADPSGGRRLYFTVRNTGPTRALGYGIGYSWVSA*
Ga0070697_1002888512	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MATTSYWFGYWVSSDEVGLKTGQEHNWIMWGFGYGDAVTVTAHPLNSFAGDSILMVKDVQVEADPSGGRRLYFTVRNTGPTRALGYGIGYSWVSA*
Ga0066692_100491282	3300005555	Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRFYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066693_102102571	3300005566	Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066708_101275803	3300005576	Soil	MGKRRKAAKSACTQRKAAENRLIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066654_100663643	3300005587	Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066903_1018078232	3300005764	Tropical Forest Soil	MANVSYWNTFWVDSGETGLLPGQEHYWVMWGFGSGDVIAVTPAPLSSDVGDQILMAKDVRSEADSSGTRRFFFTIRNVGPVRALGYGLNFSFVAA*
Ga0066903_1049309352	3300005764	Tropical Forest Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADPSGARRLYFTVRNTGPVRAIGYGLNFSFVTP*
Ga0066651_100098612	3300006031	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066658_103727462	3300006794	Soil	MGKRRKAAKSACTQRKAAENRLIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIMDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0066665_107101111	3300006796	Soil	KARRHRWGSAGKPQKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTLGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGHGLNFSFVSP*
Ga0066710_1023207202	3300009012	Grasslands Soil	VLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTLGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPLRAIGYGLNFSFVSP
Ga0099829_105037031	3300009038	Vadose Zone Soil	MANVSYWYASWVDAGETGLPPGQEHYWVMTGFGSGDAIAVTAVPLNSDAGDQVLMVKDPQTEADPSGGRRFFFTIRNTGPVRAIGYGMNFSFVSA*
Ga0099830_108576141	3300009088	Vadose Zone Soil	MANVSYWQASWVDEGETGLLPGQEHYWVMTGFGYGDAIAVTAVPLNSDAGDQVLMVKDPQTEADPSGGRRFFFTIRNTGPVRAIGYGMNFSFVSA*
Ga0066709_1043944392	3300009137	Grasslands Soil	MGKRRKAAKSACTQRKAAENRLIVMANVSYSRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0126384_107127241	3300010046	Tropical Forest Soil	MANVRYWQTSWVDSGETGLVPGAEHNWIMWGFSFTEVVSVTVAPLNSGRGDQQLMVLNVQSEADPAGGRRLFFTIRNTGSVSAIGYGMNFSFISA*
Ga0134067_104659691	3300010321	Grasslands Soil	MGKRRKAAKSACTQRKAAENRLIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNPGPIREIGYGLNFSFVSP*
Ga0134064_100288343	3300010325	Grasslands Soil	VLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0134071_106437311	3300010336	Grasslands Soil	MATVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDEGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0126381_1011702072	3300010376	Tropical Forest Soil	MANVAYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVGAIGYGLNFSFVTP*
Ga0137393_117918301	3300011271	Vadose Zone Soil	MANTSYWQGVWVDEGETGLVPGAEHHWVMSGLNYGDAVSVTAAPLNSDVGDQILMVKDVQSEADSAGGRRLFFTIRNTGPTRAIGYGMNFSFISA*
Ga0137388_109975673	3300012189	Vadose Zone Soil	YASWVDAGETGLPPGQEHYWVMTGFGSGDAIAVTAVPLNSDAGDQVLMVKDPQTEADPSGGRRFFFTIRNTGPVRAIGYGMNFSFVSA*
Ga0137383_110990262	3300012199	Vadose Zone Soil	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA*
Ga0137379_103746761	3300012209	Vadose Zone Soil	VLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA*
Ga0137377_102745311	3300012211	Vadose Zone Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA*
Ga0137370_100105275	3300012285	Vadose Zone Soil	VLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0137372_103761091	3300012350	Vadose Zone Soil	MGKRGKAAKSACTQRKAAENRLIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0137366_101500501	3300012354	Vadose Zone Soil	MGTRRKAAKSACTQRKAAENRLIVMANVSYWRRFWVDSGETGLLSGSEHYWAMWGFGSLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0137371_101427615	3300012356	Vadose Zone Soil	MANVSYWQASWVDSGETGLVPGAEHYWILWGFSYGAVVGVTAAPLNSDAGDQQLMVKDVQSEADPTGGRRLLFTIRNTGSVRALGYGINFSFISA*
Ga0137384_105963371	3300012357	Vadose Zone Soil	VGKRRKSREKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGL
Ga0137397_111913861	3300012685	Vadose Zone Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDEGDQILMVKDVRSEADSSGARRLYFTVRNTGPI
Ga0164300_100180775	3300012951	Soil	MANVSYWHTSWVDSGETGLLPGQEHYWTMWGFGFLDVVAVTPGPLNSSEGDQILMVKDVQSEADSSGGRRLYFTVRNTGPVGAIGYGLNFSFVSA*
Ga0134077_101469972	3300012972	Grasslands Soil	VGEAPEKPQKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0134110_101340293	3300012975	Grasslands Soil	MANVSYWRTFWVDAGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDQGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0134076_104984521	3300012976	Grasslands Soil	RKRFRKARRHRWGSAGKPQKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0157369_110240852	3300013105	Corn Rhizosphere	MANVSYWQASWVDAGETGLLPGQEHYWAMWGFGYGDVLAVTPAPFNSDAGDQVLMVKDIRPEADGSGGRRLYFTVRNNGPVRAIAYGLNFSFISA*
Ga0167622_10082864	3300015158	Glacier Forefield Soil	MANVSYWRATWVDSGETGLLPGQEHNWTMWGFGFLDVVGVTPGPLNSDAGDQILMVKDIRSEADSSGGRRLFFTVRNTGPVRAIGYGLNFSFISA*
Ga0134072_104538512	3300015357	Grasslands Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDEGDQILMVKDVRSEADSSGARRLYFTVRNTGPIRAIGYGLNFSFVSP*
Ga0134085_100481391	3300015359	Grasslands Soil	ALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP*
Ga0132258_127152342	3300015371	Arabidopsis Rhizosphere	MANVSYWNTFWVDSGETGLQPGQEHYWVMWGFGPGDVIAVTPTPLSSDVGDQMLMVKDVQSEADSGGTRRFFFTIRNTGPVRALGYGLNFSFVAA*
Ga0182032_100316991	3300016357	Soil	WQTSWVDAGETGLLPGQEHYWVMWGFGYLDAVAVTAAPLNSDEGDQMLMVRDVQTEASSGVRRFFFTIRNTGPIRALGYGLNFSFITE
Ga0134083_101835163	3300017659	Grasslands Soil	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0187783_111829331	3300017970	Tropical Peatland	MANVSYFFASWVDSGETGLLPGAQHFWQLTGFGFGNFVGVTVSALTSDAGPQQLMVKDVQSQTSGGTRRLLFTIQNTGSVRALGYGMNFAFVSA
Ga0187767_102444981	3300017999	Tropical Peatland	MANVSYWQTSWVDAGETGLPPGQEHYWVLWGFGYGDVLAVTAASLNSDAGDQVLMVKDLESEADPDGGRRLYFTVRNTGPVRALGYGMNF
Ga0184605_100349774	3300018027	Groundwater Sediment	MATVFYWRTFWVDAGETGLLPGQEHHWAMWGFGFLDVLAVTPAPLNSDVGDQILMVKDVRSEANPSGGRRLYFTVRNMGPVRAIGTA
Ga0184619_101649272	3300018061	Groundwater Sediment	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSSAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA
Ga0184618_101531752	3300018071	Groundwater Sediment	MANVSYWHTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA
Ga0066667_104874271	3300018433	Grasslands Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDVGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVLP
Ga0066669_110570992	3300018482	Grasslands Soil	VLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0193707_11518213	3300019881	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDEGDQILMVKDVRSEADSSGARRLYFTVRNTGPIRTIGYGLNFSFVSP
Ga0210407_105795022	3300020579	Soil	MANISYWQGSWVDAGETGLVPGGEMYWVMWGFGYGDAIGVTVAPLNSGAGDQELMVKDVRTEADPNGGRRFFFTVRNTGPVRALGYGLNYSFISA
Ga0210403_102638483	3300020580	Soil	MANISYWQGSWVDAGETGLVPGGEMYWVMWGFGYGDAIGVTVAPLNSGAGDQELMIKDVRTEADPNGGRRFFFTVRNTGPVRALGYGLNYSFISA
Ga0210382_100555062	3300021080	Groundwater Sediment	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTSGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA
Ga0193719_101038351	3300021344	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDEGDQILMVKDVRSEADSSGARRLYFTVRNTGPIRAIGYGLNFSFVSP
Ga0210389_105596141	3300021404	Soil	SGETGLLPGAQHFWQLTGFGFGDFVGVTVSALTSDAGPQQLMVKDVQSQTSGGTRRLLFTIQNTGSVRALGYGMNFAFVSA
Ga0126371_111736383	3300021560	Tropical Forest Soil	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFSDVLAVTPGPLNSPDEGDQILMVKDVQSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVTP
Ga0224712_105619802	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	QASWVDAGETGLLPGQEHNWVMWGFGYGDAVAVTAAPLNSDAGDQILAVQNIQSEADGSGDRRLYFSVRNTGPTRAIAYGLNFSFISA
Ga0222622_107167022	3300022756	Groundwater Sediment	MANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSAAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA
Ga0207684_104934553	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MANVSYWQASWVDEGETGLLPGQEHYWVMTGFGYGDAIAVTAGPLNSDAGDQVLMVKDAQTEADPGGGRRFFFTIRNTGPVRAIGYGMNFSFVSA
Ga0207684_106469401	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MANVSYWYASWVDAGETGLPPGQEHYWVMTGFGSGDAIAVTAVPLNSDAGDQVLMVKDSQTEADPSGGRRFFFTIRNTGPIRAIGYGMNFSFVSA
Ga0207707_102575792	3300025912	Corn Rhizosphere	MANISYWQASWVDAGETGLLPGQEHNWVMWGFGYGDAVAVTAAPLNSDAGDQILAVQNIQSEADGSGDRRLYFSVRNTGPTRAIAYGLNFSFISA
Ga0207646_100005866	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MANVSYWYASWVDAGETGLLPGYEHYWVMTGFGPGDAIAVTAVPLNSDAGDQALMVKDSQTEADPSGGRRFFFTIRNTGPIRAIGYGMNFSFVSA
Ga0209265_10303273	3300026308	Soil	MGKRRKAAKSACTQRKAAENRLIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209268_10124216	3300026314	Soil	LARESHPGITETYFVKLGGNGGEAPKKPQKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209266_12727141	3300026327	Soil	GKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGLGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209377_10705412	3300026334	Soil	VLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRFYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209057_10105587	3300026342	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209690_11589531	3300026524	Soil	QRKAAENRLIVMANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209378_10328321	3300026528	Soil	RRHRWGSAGKPQKVLAPSGKRQKIALIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTLGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209807_11345761	3300026530	Soil	AAKSACTQRKAAENRLIVMANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLGVTPGPLNSDVGDQILMIKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0209807_11668732	3300026530	Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDQGDQILMVKDVRSEADSSGARRLYFTVRNTGPIRAIGYGLNFSFVSP
Ga0209180_102820141	3300027846	Vadose Zone Soil	MANVSYWYASWVDAGETGLPPGQEHYWVMTGFGSGDAIAVTAVPLNSDAGDQVLMVKDPQTEADPSGGRRFFFTIRNTGPVRAIGYGMNFSFVSA
Ga0307312_102594184	3300028828	Soil	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSSAGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIG
Ga0170824_1078812031	3300031231	Forest Soil	MANVSYWHTFWVDSGETGLLPGQEHYWTMWGFGFLDVLAVTPGPLNSSAGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVGAIGYGLNFSFVSP
Ga0308194_101006041	3300031421	Soil	MANVSYWHTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSSAGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSA
Ga0170820_165408551	3300031446	Forest Soil	LVMANVSYWHTFWVDSGETGLLPGQEHYWTMWGFGFLDVLAVTPGPLNSDEGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVGAIGYGLNFSFVSP
Ga0310915_102273182	3300031573	Soil	MANVSFWQTSWVDAGETGLLPGQEHYWVMWGYGYLDAVAVTAAPLNSDEGEQMLMVKDIQTETSAGVRRFFFTVRNTGPVSALGYGLNFSFITE
Ga0307469_116262121	3300031720	Hardwood Forest Soil	MANVSYWRTFWVDSGETGLLPGHEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADSSGGRRLYFTVRNTGPVRAIGYGLNFSFVSP
Ga0306918_105538593	3300031744	Soil	MANVSFWQTSWVDAGETGLLPGQEHYWVMWGYGYLDAVAVTAAPLNSDEGEQMLMVKDIQTETSAGVRRFFFTVRNTGPVRALGYGLNFSFITE
Ga0310910_107214833	3300031946	Soil	TSWVDAGETGLLPGQEHYWVMWGYGYLDAVAVTAAPLNSDEGEQMLMVKDIQTETSAGVRRFFFTVRNTGPVRALGYGLNFSFITE
Ga0306924_116643952	3300032076	Soil	WGSSERSLSAQADCIRCPMANVSFWQTSWVDAGETGLLPGQEHYWVMWGYGYLDAVAVTAAPLNSDEGEQMLMVKDIQTETSAGVRRFFFTVRNTGPVRALGYGLNFSFITE
Ga0307472_1012097461	3300032205	Hardwood Forest Soil	EQPSRGLVMANVSYWRTFWVDSGETGLLPGQEHYWAMWGFGFLDVLAVTPGPLNSDAGDQILMVKDVRSEADPSGGRRLYFTVRNTGPVRAIGYGLNFSFVTP
Ga0335085_103656631	3300032770	Soil	MANVSYFVASWVDSGETGLVPGAQHFWQLTGFGYGDFVGVTVSALTSDAGPQQLMVKDVQSQTSGGVRRLLFTIQNTGSVRALGYGMNFAFVSA
Ga0335085_116907391	3300032770	Soil	ANVSYWQTSWVDAGETGLIPGQEHHWVMWGFGYGDVIAVTAAPLNSDAGDQVLMIKDVQTEADGSGGRRFFFTVLNTGPTRAIGYGLNFSFVSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092903

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences