| Basic Information | |
|---|---|
| Family ID | F092897 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 107 |
| Average Sequence Length | 60 residues |
| Representative Sequence | VLGASDDDVAGTIVYRAPTGTTTVSVSFLAEEYSIAGVARCQFAGTAVVAQ |
| Number of Associated Samples | 97 |
| Number of Associated Scaffolds | 107 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 92 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.32 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.495 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.449 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (45.794 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 41.77% Coil/Unstructured: 58.23% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.32 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 107 Family Scaffolds |
|---|---|---|
| PF00082 | Peptidase_S8 | 11.21 |
| PF02073 | Peptidase_M29 | 9.35 |
| PF01250 | Ribosomal_S6 | 0.93 |
| PF02597 | ThiS | 0.93 |
| PF00437 | T2SSE | 0.93 |
| COG ID | Name | Functional Category | % Frequency in 107 Family Scaffolds |
|---|---|---|---|
| COG2309 | Leucyl aminopeptidase (aminopeptidase T) | Amino acid transport and metabolism [E] | 9.35 |
| COG0360 | Ribosomal protein S6 | Translation, ribosomal structure and biogenesis [J] | 0.93 |
| COG1977 | Molybdopterin synthase sulfur carrier subunit MoaD | Coenzyme transport and metabolism [H] | 0.93 |
| COG2104 | Sulfur carrier protein ThiS (thiamine biosynthesis) | Coenzyme transport and metabolism [H] | 0.93 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 21.50% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 7.48% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 6.54% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.67% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 4.67% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.74% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.74% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.74% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 3.74% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.80% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 2.80% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 2.80% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 2.80% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.80% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.87% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 1.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.87% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.87% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.87% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.93% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 0.93% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.93% |
| Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 0.93% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.93% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.93% |
| Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.93% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.93% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.93% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.93% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.93% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.93% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.93% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.93% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.93% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2124908045 | Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011 | Environmental | Open in IMG/M |
| 3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
| 3300001686 | Grasslands soil microbial communities from Hopland, California, USA | Environmental | Open in IMG/M |
| 3300003267 | Sugarcane bulk soil Sample L1 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
| 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Host-Associated | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
| 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
| 3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
| 3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006800 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 | Environmental | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
| 3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
| 3300010037 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25 | Environmental | Open in IMG/M |
| 3300010038 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106 | Environmental | Open in IMG/M |
| 3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
| 3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
| 3300010042 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012351 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012901 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1 | Environmental | Open in IMG/M |
| 3300012905 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2 | Environmental | Open in IMG/M |
| 3300012907 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1 | Environmental | Open in IMG/M |
| 3300012908 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1 | Environmental | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
| 3300017997 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex | Environmental | Open in IMG/M |
| 3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
| 3300018076 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex | Environmental | Open in IMG/M |
| 3300018078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex | Environmental | Open in IMG/M |
| 3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
| 3300019884 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2 | Environmental | Open in IMG/M |
| 3300020003 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2 | Environmental | Open in IMG/M |
| 3300020016 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1 | Environmental | Open in IMG/M |
| 3300021073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo | Environmental | Open in IMG/M |
| 3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
| 3300022880 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6 | Environmental | Open in IMG/M |
| 3300024055 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6 | Environmental | Open in IMG/M |
| 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027587 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027821 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027993 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5 | Environmental | Open in IMG/M |
| 3300028717 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158 | Environmental | Open in IMG/M |
| 3300028771 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369 | Environmental | Open in IMG/M |
| 3300028784 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121 | Environmental | Open in IMG/M |
| 3300028791 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144 | Environmental | Open in IMG/M |
| 3300028810 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151 | Environmental | Open in IMG/M |
| 3300028814 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183 | Environmental | Open in IMG/M |
| 3300028828 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202 | Environmental | Open in IMG/M |
| 3300028876 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140 | Environmental | Open in IMG/M |
| 3300028878 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117 | Environmental | Open in IMG/M |
| 3300028885 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185 | Environmental | Open in IMG/M |
| 3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
| 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Host-Associated | Open in IMG/M |
| 3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
| 3300034354 | Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| KansclcFeb2_13904170 | 2124908045 | Soil | YREDDDLDAGSDFDVLGATDDDVAGTIVYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVAAQ |
| F14TB_1014900841 | 3300001431 | Soil | DVLGADDDDVAGTIVYRTPTGSATVSVAFFGEEYSIAGVARCQFAGTAVSAQ* |
| F14TB_1042928292 | 3300001431 | Soil | GSDDDDVAGTIVYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVSAQ* |
| C688J18823_108574352 | 3300001686 | Soil | GTIVYRAPTGTSTVSVSFLGEEYSIAGVSRCQFAGTAVVAQ* |
| soilL1_100974132 | 3300003267 | Sugarcane Root And Bulk Soil | DASSDFDVLGAQDDDVAGTLVYRSPTGSSVVTVSFLAEEYSLSGVARCDFSAAAVAAQ* |
| Ga0062590_1025711641 | 3300004157 | Soil | DDDDVAGTIVYRTATGTGAVSISFLGEEYSIAGVARCQFAGTAVSAQ* |
| Ga0070680_1013466812 | 3300005336 | Corn Rhizosphere | AGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0070660_1004823431 | 3300005339 | Corn Rhizosphere | STLDNARLHVAAIDDAGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTMVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0070661_1006856062 | 3300005344 | Corn Rhizosphere | AGTIVYRTPTGSGTVSVSFLGEEYAIAGVARCQFAGTAVAAQ* |
| Ga0070661_1011742431 | 3300005344 | Corn Rhizosphere | DTAAFYREDDDLDASADYDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLAEEYSIAGVSRCQFAGTGVVAQ* |
| Ga0070673_1008749282 | 3300005364 | Switchgrass Rhizosphere | SADFDVLGASDDDVAGTIVYRAPTGASTVSVSFMAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0070673_1023209311 | 3300005364 | Switchgrass Rhizosphere | IVYRAPTGTTMVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0070659_1006414122 | 3300005366 | Corn Rhizosphere | AGADYDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0070700_1009093791 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | LDASADFDVLGASDDDVAGTIVYRAPTGASTVSVSFMAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0070678_1016108092 | 3300005456 | Miscanthus Rhizosphere | DVLGASDDDVAGTIVYRAPTGASTVSVSFMAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0070662_1010162611 | 3300005457 | Corn Rhizosphere | VAGTIVYRAPTGTATVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0070685_109056402 | 3300005466 | Switchgrass Rhizosphere | LDNARLHVAAIDDAGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTMVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0070698_1017494801 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | GSTDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVARCQFAGTAVVAQ* |
| Ga0066706_112534161 | 3300005598 | Soil | DDDVAGTIVYRSPTGSTTVTVSFLNEEFSLAGVNRCQFAGTAVSAQ* |
| Ga0068856_1013693012 | 3300005614 | Corn Rhizosphere | SAKSTLDNARLHVAAIDDAGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0070702_1015458182 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | IVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0068870_108546291 | 3300005840 | Miscanthus Rhizosphere | AAIDDAGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0068863_1008363221 | 3300005841 | Switchgrass Rhizosphere | DLDGGSDSDVLGSNDDDVAGTIVYRTPTGSGTVSVAFLGEEYSIAGVGRCQFAGTAVAAQ |
| Ga0081455_108317972 | 3300005937 | Tabebuia Heterophylla Rhizosphere | TLDNARVHVVGADDAAAFYREDDDLDASSDFDVLGASDDDVAGTIVYRSPTGSSSVTVAFLAEEYSIAGVNRCQFAGTAVVAQ* |
| Ga0066652_1007870991 | 3300006046 | Soil | RLHVAGIDDTAAYYKEDDDLDASADFDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLGEEYSIAGVSRCQFAGTAIVAQ* |
| Ga0074048_108593072 | 3300006581 | Soil | SIVYRSPTGSSVVTVSFLAEEYSLAGTGRCQFAGTGVVAQ* |
| Ga0066660_110986472 | 3300006800 | Soil | NDDDSAGTIVYRSPTGTSTVTVSFLAEEFSIAGTNRCQFAGTAVVAQ* |
| Ga0075431_1008991371 | 3300006847 | Populus Rhizosphere | GTIVYRSPTGSSAVSVAFLAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0075434_1015881872 | 3300006871 | Populus Rhizosphere | DAGSDYDVLGSDDDDVAGTIVYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVTAQ* |
| Ga0079219_111978082 | 3300006954 | Agricultural Soil | NARLHVAAIDDAGAFYREDDDLDASADYDVLGSTDDDVAGTIVYRAPTGTTTVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0066710_1019800082 | 3300009012 | Grasslands Soil | AHVAGVADTGAFYREDDDLDASSNFDVLSTNDDDVAGTIVYRSPTGSSTVSVSFLAEEFSIASVHRCQFAGSAVVAQ |
| Ga0066709_1006457191 | 3300009137 | Grasslands Soil | GSNDVDVAGTIADRSPTGSSTVSVSFLNDEFSLAGVNGCQFAGTAVSAQ* |
| Ga0066709_1008507592 | 3300009137 | Grasslands Soil | DYDVLGSDDDDVAGTIVYRSPTGASVVTVSFLAEEYSLAGTGRCQFAGTGVVAQ* |
| Ga0114129_112812081 | 3300009147 | Populus Rhizosphere | ARLHVAAIDDTAAFYREDDDLDASSDFDVLGASDDDVAGTIVYRSPTGSSSVSVAFLAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0114129_125142572 | 3300009147 | Populus Rhizosphere | GTIVYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVSAL* |
| Ga0111538_102930262 | 3300009156 | Populus Rhizosphere | AAFYREDDDLDASSDFDVLGASDDDVAGTIVYRSPTGSTTVSVAFLAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0105242_103932082 | 3300009176 | Miscanthus Rhizosphere | AGVDDTAAFYREDDDLDASTDYDVLGSSDDDAAGTIVYRAPTGTTTVTVSFLAEEYSIAGVSRCQFAGTGVVAQ* |
| Ga0105248_112770651 | 3300009177 | Switchgrass Rhizosphere | TVSAKSTLDNARVHIAGVDDTAAFYREDDDLDASADYDVLGASDDDAVGTIVYRAPTGTTTVTVSFLAEEYSIAGVSRCQFAGTGVVAQ* |
| Ga0105237_124697921 | 3300009545 | Corn Rhizosphere | LDNARLHVAAIDDAGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0105249_103045003 | 3300009553 | Switchgrass Rhizosphere | STDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVARCQFAGTAVVAQ* |
| Ga0126313_115385792 | 3300009840 | Serpentine Soil | VLGGSDDDVAGTIVYRSPTGTTTVSVSFLAEEYSIAGISRCQFAGTAVLAQ* |
| Ga0126304_101253752 | 3300010037 | Serpentine Soil | MTISARSTLDNARLHVAAVDDTAAFYREDDDLDANSDFDVLGGSDDDVAGTIVYRSPTGTTSVSLAFLAEEYSIAGVNRCQFAGTAVVAQ* |
| Ga0126304_112858721 | 3300010037 | Serpentine Soil | AGTIVYRSPTGSTSVSIAFLAEEYSIAGVGRCQFAGTAVVAQ* |
| Ga0126315_106348552 | 3300010038 | Serpentine Soil | DNARLHVAAIDDTAAFYREDDDLDASSDYDVLGASDDDVAGTLVYRAPTGTTTVSVSFLAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0126308_112564812 | 3300010040 | Serpentine Soil | AGTIVYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVSAQ* |
| Ga0126312_104479241 | 3300010041 | Serpentine Soil | DLDASSDFDVLGASDDDVAGTIVYRSPTGSSSVSVAFLAEEYSIAGVSRCQFAGTAVVAQ |
| Ga0126314_103419271 | 3300010042 | Serpentine Soil | VLGSSDDDAAGTIVYRAPTGTTTVSVSFLAEEYSIAGVARCQFAGTAVVAQ* |
| Ga0126314_105976601 | 3300010042 | Serpentine Soil | DDDLDASSDFDVLGASDDDVAGTIVYRSPTGSSSVSVAFLAEEYSIAGVNRCQFAGTAVVAQ* |
| Ga0126377_110927851 | 3300010362 | Tropical Forest Soil | GSDFDLLGSDDDDVAGTIVYRSPTGTGTVSVAFLGEEYSIAGVARCQFAGTAVSAP* |
| Ga0134125_110969951 | 3300010371 | Terrestrial Soil | ADFDVLGASDDDVAGTLVYRAPTGASTVSVSFMAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0105239_110319421 | 3300010375 | Corn Rhizosphere | HVAGIDDTGPFYKEDDDLDASADFDVLGASDDDAAGTIVYRAPTGTSTVSVSFLGEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0105246_103102322 | 3300011119 | Miscanthus Rhizosphere | AFYKEDDDLDASADFDVLGASDDDVAGTIVFRAPTGASTVSVSFMAEEYSIAGVSRCQFSGTAVVAQ* |
| Ga0137365_104466283 | 3300012201 | Vadose Zone Soil | TITAKSTLDNARAHVAGVADTGAFYREDDDLDASSNFDVLSTNDDDVAGTIVYRSPTGSSTVSVSFLAEEFSIASVHRCQFAGSAVVAQ* |
| Ga0137376_111676072 | 3300012208 | Vadose Zone Soil | MTITAKSTLDNARAHVAGVADTGAFYREDDDLDASSNFDVLSTNDDDVAGTIVYRSPTGSSTVSVSFLAEEFSIASVHRCQFAGSAVVAQ* |
| Ga0137370_107189641 | 3300012285 | Vadose Zone Soil | VLPRGRHLDAGSDSDVLGADDDDVAGTIIYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVAAQ* |
| Ga0137386_110554861 | 3300012351 | Vadose Zone Soil | MTITAKSTLDNARAHVAGVADTGAFYREDDDLDASSNFDVLSTNDDDVAGTFVYRSPTGSSTVSVSFLAEEFSIASVHRCQFAGSAVVAQ* |
| Ga0157288_101199492 | 3300012901 | Soil | AGIYDTAAFYREDDDLDAGADYDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0157296_102253862 | 3300012905 | Soil | YREDDDLDAGADYDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0157283_100123192 | 3300012907 | Soil | SELRDRRPLLHLDNARLHVAAIDDAGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVARCQFAGNAVVAQ* |
| Ga0157286_102817542 | 3300012908 | Soil | AGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVAFLAEEFSIAGVSRCQFAGTAVVAQ* |
| Ga0164300_111455071 | 3300012951 | Soil | AFYREDDDLDASTDYDVLGSSDDDAAGTIVYRAPTGTTTVTVSFLAEEYSIAGVSRCQFAGTGVVAQ* |
| Ga0164298_104584781 | 3300012955 | Soil | EDDDLDASTDYDVLGSSDDDAAGTIVYRAPTGTTTVTVSFLAEEYSIAGVSRCQFAGTAVVAQ* |
| Ga0164309_113720742 | 3300012984 | Soil | GTIVYRSPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVSAQ* |
| Ga0157374_116193951 | 3300013296 | Miscanthus Rhizosphere | DDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVARCQFAGTAVVAQ* |
| Ga0184610_12070932 | 3300017997 | Groundwater Sediment | DTIVFRTPTGTAVVTVSFLAEEYSLAGTGRCQFAGSGVVAH |
| Ga0184605_104571711 | 3300018027 | Groundwater Sediment | DTAAFYREDDDLDASSDYDVLGSHDDDVAGTIVYRSPTGTSVVSVSFLAEEYSLAGTGRCQFAGTGVVAQ |
| Ga0184609_104860761 | 3300018076 | Groundwater Sediment | DDVAGTLVYRSPTGTSVVTVSFMSEQYSIAGTNRCQFAASAIAAS |
| Ga0184612_101768691 | 3300018078 | Groundwater Sediment | LDATDDFDFLSAEDDDVAGTLVYRSPTGTSVVTVSFMSEQYSIAGTNRCQFAASVVAAS |
| Ga0066669_123878992 | 3300018482 | Grasslands Soil | ASSDYDVLGSDDDDVAGTIVYRAPTGSTTVTVSFLGEEYSIAGVNRCQFAGTAVTAQ |
| Ga0193741_10839652 | 3300019884 | Soil | LDASSDFDVLGASDDDVAGTIVYRSPTGSSSVSVAFLAEEYSIAGVSRCQFAGTAVVAQ |
| Ga0193739_10738752 | 3300020003 | Soil | DDLDATDDFDFLSAEDDDVAGTLVYRSPTGTSVVTVSFMSEQYSIAGTNRCQFAASAVVA |
| Ga0193696_11810291 | 3300020016 | Soil | GGSDSDVLGSDDDDVAGTIVYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVSGQ |
| Ga0210378_102801282 | 3300021073 | Groundwater Sediment | SAEDDDVAGTLVYRSPTGTSVVTVSFMSEQYSIAGTNRCQFAASVVAAS |
| Ga0182009_101113961 | 3300021445 | Soil | APTGTTTVSVSFLAEEFSIAGVSRCQLSGTAVVAQ |
| Ga0247792_11221932 | 3300022880 | Soil | AAFYREDDDLDAGADYDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ |
| Ga0247794_100148691 | 3300024055 | Soil | DNARLHVAAIDDAGAFYREDDDLDANGDFDVLGSTDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVARCQFAGTAVVAQ |
| Ga0207647_104808752 | 3300025904 | Corn Rhizosphere | TDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVARCQFAGTAVVAQ |
| Ga0207645_107839832 | 3300025907 | Miscanthus Rhizosphere | MTVSARSTLDNARLHVAAIDDAGAFYREDDDLDASADYDVLGSTDDDVAGTIVYRAPTGTTTVSVAFLAEEFSI |
| Ga0207663_108128292 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | IVYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVAAQ |
| Ga0207706_109641491 | 3300025933 | Corn Rhizosphere | VAGTIVYRAPTGTATVSVAFLAEEFSIAGVSRCQFAGTAVVAQ |
| Ga0207706_112279662 | 3300025933 | Corn Rhizosphere | DASADFDVLGASDDDAAGTIVYRAPTGTSTVSVSFLGEEYSIAGVSRCQFAGTAVVAQ |
| Ga0207686_109016451 | 3300025934 | Miscanthus Rhizosphere | AGVDDTAAFYREDDDLDASTDYDVLGSSDDDAAGTIVYRAPTGTTTVTVSFLAEEYSIAGVSRCQFAGTGVVAQ |
| Ga0207670_106413012 | 3300025936 | Switchgrass Rhizosphere | VYRAPTGTTTVSVAFLAEEFSIAGVSRCQFAGTAVVAQ |
| Ga0207704_104699592 | 3300025938 | Miscanthus Rhizosphere | DDTAAFYREDDDLDASTDYDVLGASDDDAAGTIAYRAPTGTTTVTVSFLAEEYSIAGVSRCQFAGTGVVAQ |
| Ga0207651_101379951 | 3300025960 | Switchgrass Rhizosphere | FDVLGSTDDDVAGTIVYRAPTGTTMVSVAFLAEEFSIAGVSRCQFAGTAVVAQ |
| Ga0207640_110046872 | 3300025981 | Corn Rhizosphere | YDVLGSTDDDVAGTIVYRAPTGTTTVSVAFLAEEFSIAGVSRCQFAGTAVVAQ |
| Ga0207708_109962681 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | TDDLDASADFDVLGASDDDVAGTIVYRAPTGASTVSVSFMAEEYSIAGVSRCQFAGTAVVAQ |
| Ga0207683_112614431 | 3300026121 | Miscanthus Rhizosphere | AFYKEDDDLDASADLDVLGASDDDVAGTIVYRAPTGASTVSVSFMAEEYSIAGVSRCQFAGTAVVAQ |
| Ga0209220_11270491 | 3300027587 | Forest Soil | DDDLGANSTFDIMGANDTHVAGTLVYRSPTGSSTVSVAFMSEEFSIAGVNRCQFAATAVAGQ |
| Ga0209811_101280421 | 3300027821 | Surface Soil | VYRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTAVSAQ |
| Ga0247749_10154561 | 3300027993 | Soil | AGADYDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLAEEFSIAGVSRCQFAGTAVVAQ |
| Ga0307298_101198232 | 3300028717 | Soil | DAAGTIAYRSPTGTSAVTVIFLVEEYSIAGVSRCQFAATAVVAQ |
| Ga0307320_104362811 | 3300028771 | Soil | GIDDTAAFYREDDDLDAGSDYDVLGSSDDDVAGTIVYRAPTGTTTVSVSFLGEEYSIAGVSRCQFAGTAVTAQ |
| Ga0307282_102668231 | 3300028784 | Soil | DDDVAGTIVYRAPTGTTTVTVSFLAEEYSIAGVARCQFAGTAVVAQ |
| Ga0307290_100558953 | 3300028791 | Soil | VAGTIVYRTPTGSSTVTVAFLNEEFTLAGTSRCQFAGTAVVAQ |
| Ga0307294_101698951 | 3300028810 | Soil | DFDVLGASDDDVAGTIVYRAPTGASTVSVSFLGEEYSIAGVSRCQFAGTAVVAQ |
| Ga0307302_104789721 | 3300028814 | Soil | VADTGASYREDDDLDASSDYDLLGTNDDDAAGTIAYRSPTGTSAVTVTFLVEEYSIAGVSRCQFAATAVVAQ |
| Ga0307312_100619541 | 3300028828 | Soil | DYDLLGTNDDDAAGTIAYRSPTGTSTVTVTFLVEEYSIAGVGRCQFAATAVVAQ |
| Ga0307312_108095682 | 3300028828 | Soil | DYDVLGSNDDDAAGWIVYRSPTGSSVVTVSFLAEEYSLAGTGRCQFAGTAVVAR |
| Ga0307312_109705892 | 3300028828 | Soil | VLGASDDDVAGTIVYRAPTGTTTVSVSFLAEEYSIAGVARCQFAGTAVVAQ |
| Ga0307286_101737762 | 3300028876 | Soil | DVAGTLVYRSPTGTSVVTVSFMSEQYSIAGTNRCQFAATAVASS |
| Ga0307278_100396543 | 3300028878 | Soil | SARSTLDNARVHVAGVADTGAFYREDDDLDASSDYDLLGTNDDDAAGTIAYRSPTGTSAVTVTFLVEEYSIAGVSRCQFAATAVVAQ |
| Ga0307304_102041151 | 3300028885 | Soil | TLDNARLHVAGIDDTAAFYKEDDDLDASADFDVLGASDDDVAGTIVYRAPTGASTVSVSFMAEEYSIAGVSRCQFAGTAVVAQ |
| Ga0307499_100930512 | 3300031184 | Soil | AGTIVYRTPTGSGTVSVSFLGEEFSIAGVARCQFAGTAVAGQ |
| Ga0307410_101860901 | 3300031852 | Rhizosphere | DDVAGTIVYRSPTGSSSVSVTFLAEEYSIAGISRCQFAGTAVVAQ |
| Ga0307470_101055261 | 3300032174 | Hardwood Forest Soil | YRTPTGSGTVSVSFLGEEYSIAGVARCQFAGTGVAAQ |
| Ga0364943_0451951_360_500 | 3300034354 | Sediment | DDDVAGTLVYRSPTGTSVVTVSFMSEQYSIAGTNRCQFAATAVASS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |