Metagenome / Metatranscriptome Family F092820

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092820
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	59 residues
Representative Sequence	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Number of Associated Samples	88
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.16 %
% of genes near scaffold ends (potentially truncated)	40.19 %
% of genes from short scaffolds (< 2000 bps)	93.46 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.944 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.561 % of family members)
Environment Ontology (ENVO)	Unclassified (33.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.617 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.67% β-sheet: 36.67% Coil/Unstructured: 41.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF13783	DUF4177	14.95
PF00534	Glycos_transf_1	6.54
PF13489	Methyltransf_23	6.54
PF13439	Glyco_transf_4	1.87
PF13384	HTH_23	0.93
PF13610	DDE_Tnp_IS240	0.93
PF01872	RibD_C	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.93
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
All Organisms	root	All Organisms	42.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
cellular organisms	root	All Organisms → cellular organisms	42.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	28.04 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	27.10 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.93 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	27.10 %
Siccirubricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus	0.93 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	27.10 %
Siccirubricoccus deserti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus → Siccirubricoccus deserti	0.93 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12954868	Not Available	697	Open in IMG/M
3300001867\|JGI12627J18819_10039213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1973	Open in IMG/M
3300003505\|JGIcombinedJ51221_10012263	All Organisms → cellular organisms → Bacteria → Proteobacteria	2829	Open in IMG/M
3300004091\|Ga0062387_100740051	Not Available	725	Open in IMG/M
3300005167\|Ga0066672_10600112	Not Available	713	Open in IMG/M
3300005181\|Ga0066678_10931183	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005332\|Ga0066388_103178235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300005434\|Ga0070709_10345810	Not Available	1097	Open in IMG/M
3300005436\|Ga0070713_100376056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1323	Open in IMG/M
3300005437\|Ga0070710_10273975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300005454\|Ga0066687_10559688	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300005557\|Ga0066704_10803354	Not Available	585	Open in IMG/M
3300005575\|Ga0066702_10608961	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005764\|Ga0066903_100501339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2057	Open in IMG/M
3300005764\|Ga0066903_101516791	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300005764\|Ga0066903_103676526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300005764\|Ga0066903_108918930	Not Available	508	Open in IMG/M
3300006163\|Ga0070715_10011370	All Organisms → cellular organisms → Bacteria	3205	Open in IMG/M
3300006176\|Ga0070765_102303383	Not Available	501	Open in IMG/M
3300006800\|Ga0066660_11169466	Not Available	605	Open in IMG/M
3300006804\|Ga0079221_10846403	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300006806\|Ga0079220_11131173	Not Available	638	Open in IMG/M
3300009143\|Ga0099792_10037456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2289	Open in IMG/M
3300009143\|Ga0099792_10710880	Not Available	651	Open in IMG/M
3300009792\|Ga0126374_10021970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2816	Open in IMG/M
3300010047\|Ga0126382_12272634	Not Available	523	Open in IMG/M
3300010048\|Ga0126373_11110773	Not Available	857	Open in IMG/M
3300010048\|Ga0126373_12061017	Not Available	633	Open in IMG/M
3300010048\|Ga0126373_12396270	Not Available	588	Open in IMG/M
3300010358\|Ga0126370_11202156	Not Available	705	Open in IMG/M
3300010359\|Ga0126376_10148149	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300010359\|Ga0126376_12791966	Not Available	538	Open in IMG/M
3300010360\|Ga0126372_12153190	Not Available	606	Open in IMG/M
3300010361\|Ga0126378_10617087	Not Available	1198	Open in IMG/M
3300010361\|Ga0126378_13002985	Not Available	538	Open in IMG/M
3300010362\|Ga0126377_10288827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1612	Open in IMG/M
3300010376\|Ga0126381_101039241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1183	Open in IMG/M
3300010376\|Ga0126381_104998962	Not Available	508	Open in IMG/M
3300012198\|Ga0137364_10545634	Not Available	873	Open in IMG/M
3300012203\|Ga0137399_10659838	Not Available	880	Open in IMG/M
3300012208\|Ga0137376_11036183	Not Available	702	Open in IMG/M
3300012285\|Ga0137370_10836077	Not Available	570	Open in IMG/M
3300012469\|Ga0150984_112610979	Not Available	868	Open in IMG/M
3300012683\|Ga0137398_10504616	Not Available	832	Open in IMG/M
3300012929\|Ga0137404_10657144	Not Available	946	Open in IMG/M
3300012948\|Ga0126375_11598511	Not Available	561	Open in IMG/M
3300012960\|Ga0164301_10633001	Not Available	795	Open in IMG/M
3300012971\|Ga0126369_11068786	Not Available	896	Open in IMG/M
3300012971\|Ga0126369_12928836	Not Available	559	Open in IMG/M
3300012989\|Ga0164305_10266439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1247	Open in IMG/M
3300016270\|Ga0182036_11737328	Not Available	527	Open in IMG/M
3300016294\|Ga0182041_10632583	Not Available	943	Open in IMG/M
3300016319\|Ga0182033_10648566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921	Open in IMG/M
3300016319\|Ga0182033_11644143	Not Available	581	Open in IMG/M
3300016319\|Ga0182033_12007894	Not Available	527	Open in IMG/M
3300016357\|Ga0182032_11069817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus → Siccirubricoccus deserti	691	Open in IMG/M
3300016387\|Ga0182040_11708502	Not Available	537	Open in IMG/M
3300016404\|Ga0182037_10145208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1780	Open in IMG/M
3300016445\|Ga0182038_11408029	Not Available	625	Open in IMG/M
3300020583\|Ga0210401_10612366	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300021560\|Ga0126371_11602213	Not Available	777	Open in IMG/M
3300021560\|Ga0126371_11725422	Not Available	749	Open in IMG/M
3300022525\|Ga0242656_1042724	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300022528\|Ga0242669_1075473	Not Available	617	Open in IMG/M
3300022724\|Ga0242665_10143755	Not Available	748	Open in IMG/M
3300025905\|Ga0207685_10746784	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300025906\|Ga0207699_10483206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300025906\|Ga0207699_11480714	Not Available	502	Open in IMG/M
3300025915\|Ga0207693_10672103	Not Available	804	Open in IMG/M
3300025928\|Ga0207700_11259405	Not Available	659	Open in IMG/M
3300026322\|Ga0209687_1303026	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300026557\|Ga0179587_10336850	Not Available	977	Open in IMG/M
3300027104\|Ga0208095_1017900	Not Available	512	Open in IMG/M
3300027108\|Ga0207946_100370	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300027502\|Ga0209622_1013757	Not Available	1382	Open in IMG/M
3300027684\|Ga0209626_1001823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4649	Open in IMG/M
3300027908\|Ga0209006_11228317	Not Available	584	Open in IMG/M
3300031231\|Ga0170824_110812503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300031543\|Ga0318516_10135668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1409	Open in IMG/M
3300031545\|Ga0318541_10595277	Not Available	618	Open in IMG/M
3300031572\|Ga0318515_10474603	Not Available	668	Open in IMG/M
3300031573\|Ga0310915_10225080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1316	Open in IMG/M
3300031573\|Ga0310915_10298699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1138	Open in IMG/M
3300031720\|Ga0307469_10165749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1678	Open in IMG/M
3300031751\|Ga0318494_10389560	Not Available	808	Open in IMG/M
3300031770\|Ga0318521_10391476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	827	Open in IMG/M
3300031771\|Ga0318546_10489588	Not Available	862	Open in IMG/M
3300031781\|Ga0318547_10163767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	1314	Open in IMG/M
3300031805\|Ga0318497_10367186	Not Available	804	Open in IMG/M
3300031805\|Ga0318497_10438258	Not Available	731	Open in IMG/M
3300031879\|Ga0306919_10175943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1577	Open in IMG/M
3300031879\|Ga0306919_10414307	Not Available	1035	Open in IMG/M
3300031890\|Ga0306925_10404030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1464	Open in IMG/M
3300031890\|Ga0306925_11764103	Not Available	594	Open in IMG/M
3300031910\|Ga0306923_10491570	Not Available	1388	Open in IMG/M
3300031912\|Ga0306921_10161774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2620	Open in IMG/M
3300031941\|Ga0310912_10822490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300031945\|Ga0310913_10205487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1376	Open in IMG/M
3300031954\|Ga0306926_11467633	Not Available	788	Open in IMG/M
3300031954\|Ga0306926_12099583	Not Available	632	Open in IMG/M
3300032035\|Ga0310911_10567582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	658	Open in IMG/M
3300032039\|Ga0318559_10279385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300032060\|Ga0318505_10240102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300032090\|Ga0318518_10659119	Not Available	533	Open in IMG/M
3300032174\|Ga0307470_10407177	Not Available	964	Open in IMG/M
3300032261\|Ga0306920_100867519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1321	Open in IMG/M
3300033289\|Ga0310914_11329869	Not Available	621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.07%
Host-Associated	Host-Associated	0.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.13%
Aquatic	Environmental → Aquatic	0.93%
Plants	Host-Associated → Plants	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.13%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.57%
Loam	Environmental → Terrestrial → Soil → Loam	20.56%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024 (SPAdes)	Environmental	Open in IMG/M
3300027108	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF030 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_129548682	3300000789	Soil	MKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
JGI12627J18819_100392134	3300001867	Forest Soil	MLGRFRRPMMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
JGIcombinedJ51221_100122631	3300003505	Forest Soil	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0062387_1007400511	3300004091	Bog Forest Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0066672_106001122	3300005167	Soil	MKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0066678_109311831	3300005181	Soil	MKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVMATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0066388_1031782353	3300005332	Tropical Forest Soil	EYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTVCFVLKKTTGLKLLAE*
Ga0070709_103458102	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0070713_1003760563	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RMLSRFRSPMMKFEYQVKPFSAGQPPDQKVLNQSGESGWEVVATFVKQDSPLCFVLKKTTGPKLAAE*
Ga0070710_102739753	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VKPFSAGQPPDQIEKVLNQSGESGWEVVATFVRQDSTLCFVLKKTTGLKLAAE*
Ga0066687_105596881	3300005454	Soil	MKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGRKLAAE*
Ga0066704_108033542	3300005557	Soil	MKFEYKVKPFSAGQPPDQIEKVLNQSGESGWEVAATFVKQVSTLCFVLKKTTGLKLAAE*
Ga0066702_106089611	3300005575	Soil	YEVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKVAAE*
Ga0066903_1005013393	3300005764	Tropical Forest Soil	MKFKYQMKLFSAGQPPDQIEKVLNQSGESGWEIVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0066903_1015167913	3300005764	Tropical Forest Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGGSGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0066903_1036765261	3300005764	Tropical Forest Soil	EYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0066903_1089189301	3300005764	Tropical Forest Soil	MVKFEYQVKPFGAGQPLDQIEKVLNQSGESGWEVVATFVKQDSTVCFVLKKTTGLK
Ga0070715_100113704	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKLAAE*
Ga0070765_1023033831	3300006176	Soil	GVRMLSRFRSPMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0066660_111694662	3300006800	Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGETGWEVVATFVKQDSTLCFVLKKTTGLKLATE*
Ga0079221_108464031	3300006804	Agricultural Soil	YQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0079220_111311731	3300006806	Agricultural Soil	MMKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0099792_100374562	3300009143	Vadose Zone Soil	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSALCFVLKKTTGLKLAAE
Ga0099792_107108801	3300009143	Vadose Zone Soil	MMKFEYQVKPFSAGQPPDQIERVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0126374_100219704	3300009792	Tropical Forest Soil	MVKFEYQVKPFSASQPPDQIEKVLNQSGESGWEVVATFVKQDSTVCFVLKKTTGLKLAAE
Ga0126382_122726342	3300010047	Tropical Forest Soil	MMKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAG
Ga0126373_111107731	3300010048	Tropical Forest Soil	MMKFKYQMKLFSAGQPPDQIEKVLNQSGESGWEIVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0126373_120610172	3300010048	Tropical Forest Soil	SAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTVCFVLKKTTGLKLVAE*
Ga0126373_123962701	3300010048	Tropical Forest Soil	MVKFEYQVKPFSASQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTG
Ga0126370_112021561	3300010358	Tropical Forest Soil	MVKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTVCFVLKKTTGLKLLAE
Ga0126376_101481491	3300010359	Tropical Forest Soil	QVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0126376_127919661	3300010359	Tropical Forest Soil	MMKFKYQVKLFSAGQPPDQIEKVLNQSGESGWEIVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0126372_121531901	3300010360	Tropical Forest Soil	MMKFEYQLKFFSAGQHPGQIEKVLNQSGESGWEVVATFVKQNSTLCFVLKKTTGPKPAAE
Ga0126378_106170872	3300010361	Tropical Forest Soil	MVKFEYQVKPFSAGQPRDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0126378_130029851	3300010361	Tropical Forest Soil	MMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTG
Ga0126377_102888272	3300010362	Tropical Forest Soil	MMKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEIVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0126381_1010392411	3300010376	Tropical Forest Soil	MMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTKGPKPAAE
Ga0126381_1049989621	3300010376	Tropical Forest Soil	PFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTVCFVLKKTTGLKLLAE*
Ga0137364_105456341	3300012198	Vadose Zone Soil	MMKFEYQVKLFSAGEPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0137399_106598381	3300012203	Vadose Zone Soil	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKLAAE
Ga0137376_110361831	3300012208	Vadose Zone Soil	MMKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE
Ga0137370_108360771	3300012285	Vadose Zone Soil	SRMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0150984_1126109791	3300012469	Avena Fatua Rhizosphere	MMKFEYQMKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE
Ga0137398_105046162	3300012683	Vadose Zone Soil	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE
Ga0137404_106571441	3300012929	Vadose Zone Soil	MMKFEYQVKPFSAGQPSDQIEKVLNQSGESGWEVVATLVKQDSTLCFVLKKTTGLKLAAE
Ga0126375_115985111	3300012948	Tropical Forest Soil	FSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0164301_106330011	3300012960	Soil	VVLGSPMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0126369_110687861	3300012971	Tropical Forest Soil	MVKFEYQVKPFGAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAPE
Ga0126369_129288361	3300012971	Tropical Forest Soil	YQVKLFSAGQPPDQIEKVLNQSGESGWEIVATFVKQDSTLCFVLKKTTGLKLAAE*
Ga0164305_102664391	3300012989	Soil	MVKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKLAAE
Ga0182036_117373281	3300016270	Soil	MMKFEYQVKPFSAGQPSGQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0182041_106325831	3300016294	Soil	MMKFEYRVKLFSAGQPPDQIEKVLNQSGESGWEVVATLVKQDSTLCFVLKKTIGPKPAAE
Ga0182033_106485661	3300016319	Soil	QVKFFSAGQPPDQIEKVLNQSGESGWEIVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0182033_116441432	3300016319	Soil	MMKFEYRVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLRFVLKKTTGPKPA
Ga0182033_120078941	3300016319	Soil	LGVWMLGRFRRPMMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0182032_110698171	3300016357	Soil	MKFEYQVKPFSAGQPPGQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTG
Ga0182040_117085022	3300016387	Soil	MVKFEYQVKPFSARQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTELKLAAE
Ga0182037_101452081	3300016404	Soil	MMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLA
Ga0182038_114080292	3300016445	Soil	MMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATLVKQDSTLCFVLKKTIGPKPAAE
Ga0210401_106123661	3300020583	Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGEAGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0126371_116022132	3300021560	Tropical Forest Soil	MMKFEYQLKFFSAGQHPGQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0126371_117254221	3300021560	Tropical Forest Soil	MVKFEYQVKPFGAGQPPDQIAKVLNQSGESGWEVVATFVKQDSTVCFVLKKPQS
Ga0242656_10427241	3300022525	Soil	RMLSRFRSPMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0242669_10754732	3300022528	Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLTAE
Ga0242665_101437551	3300022724	Soil	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTPCFVLKKTTGLKLAAE
Ga0207685_107467841	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKFEYQAKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0207699_104832062	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	SAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0207699_114807141	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTRLKLAAE
Ga0207693_106721032	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE
Ga0207700_112594051	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKITGLKLAAE
Ga0209687_13030261	3300026322	Soil	MMKFEYQVKLFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGRKLAAE
Ga0179587_103368501	3300026557	Vadose Zone Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVAATFVKQDSTLCFVLKKTTGLKLAAE
Ga0208095_10179001	3300027104	Forest Soil	KFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKLAAE
Ga0207946_1003702	3300027108	Forest Soil	MKFEYQVKPFSAGQLPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTAELKLAAE
Ga0209622_10137571	3300027502	Forest Soil	MMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0209626_10018232	3300027684	Forest Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKNTTGLKLAAE
Ga0209006_112283172	3300027908	Forest Soil	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAG
Ga0170824_1108125032	3300031231	Forest Soil	PMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAA
Ga0318516_101356681	3300031543	Soil	RFRSSMVKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0318541_105952771	3300031545	Soil	FRSPMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0318515_104746031	3300031572	Soil	MLGRFRGLMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0310915_102250801	3300031573	Soil	MMKFEYRVKFFSAGQPPDQIEKVLNQSGESGWEVVATLVKQDSTRCFVLKKTIGPKPAAE
Ga0310915_102986992	3300031573	Soil	MKFEYQVKPFSAGQPSGQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0307469_101657493	3300031720	Hardwood Forest Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGGSGWEVVATFVKQDSTLCFVLKKTAGLKLAAV
Ga0318494_103895601	3300031751	Soil	MMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0318521_103914761	3300031770	Soil	AGQPPDQIEKVLNQSGESGWEVVATLVKQDSTLCFVLKKTIGPKPAAE
Ga0318546_104895881	3300031771	Soil	MVKFEYQVKPFSARQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0318547_101637672	3300031781	Soil	MLGRFRSPMMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0318497_103671863	3300031805	Soil	MMKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAA
Ga0318497_104382582	3300031805	Soil	AGQPSGQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0306919_101759433	3300031879	Soil	FFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0306919_104143071	3300031879	Soil	MMKFEYRVKFFSAGQPPDQIEKVLNQSGESGWEVVATLVKQDSTLCFVLKKTIGPKPAAE
Ga0306925_104040301	3300031890	Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGGSGWEVVATFVKQDSTLCFVLK
Ga0306925_117641031	3300031890	Soil	MKFEYQVKPFSAGQPSGQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAA
Ga0306923_104915702	3300031910	Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGGSGWEVVATFVKQDSTLCFVLKKTTGLKLAAQ
Ga0306921_101617742	3300031912	Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGGSGWEVVATFVKQDSTLCFVLKKTTGLKLAAE
Ga0310912_108224901	3300031941	Soil	VKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0310913_102054872	3300031945	Soil	MMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEIVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0306926_114676331	3300031954	Soil	MVKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTVCFVLKKTTGLKLAAE
Ga0306926_120995831	3300031954	Soil	MVKFEYQVKPFSARQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLK
Ga0310911_105675822	3300032035	Soil	FSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0318559_102793851	3300032039	Soil	VWMLGRFRRPMMKFEYRVKFFSAGQPPDQIEKVLNQSGESGWEVVATLVKQDSTLCFVLKKTIGPKPAAE
Ga0318505_102401021	3300032060	Soil	VWMLGRFRRAMMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE
Ga0318518_106591191	3300032090	Soil	MMKFEYRVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPA
Ga0307470_104071771	3300032174	Hardwood Forest Soil	MKFEYQVKPFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGLKLAE
Ga0306920_1008675193	3300032261	Soil	MMKFEYRVKFFSAGQPPDQIEKVLNQSGESGWEVVATLVKQDSTLCFVLKK
Ga0310914_113298692	3300033289	Soil	MLGRFRRPMMKFEYQVKFFSAGQPPDQIEKVLNQSGESGWEVVATFVKQDSTLCFVLKKTTGPKPAAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092820

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences