Metagenome / Metatranscriptome Family F092811

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092811
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	119 residues
Representative Sequence	AYAGSWTASNRHGAAWLSLWDDRIARGLDPQTFGAVKAFDLMLEGPGALNAFAGLVGVLRAGGIRHLLIPLPAESYACGLLTPFAAEVVDMNFVVKRLGGSPPVPPGPVYFDIRH
Number of Associated Samples	99
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.94 %
% of genes near scaffold ends (potentially truncated)	94.39 %
% of genes from short scaffolds (< 2000 bps)	85.98 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.065 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.626 % of family members)
Environment Ontology (ENVO)	Unclassified (28.972 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.121 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.08% β-sheet: 27.97% Coil/Unstructured: 55.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00730	HhH-GPD	28.04
PF06155	GBBH-like_N	4.67
PF07690	MFS_1	4.67
PF12836	HHH_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	28.04
COG0177	Endonuclease III	Replication, recombination and repair [L]	28.04
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	28.04
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	28.04
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	28.04
COG3536	Uncharacterized conserved protein, DUF971 family	Function unknown [S]	4.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.07 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	88.79 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	88.79 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	88.79 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	76.64 %
Unclassified	root	N/A	0.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	76.64 %
Unclassified	root	N/A	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10008897	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300000955\|JGI1027J12803_107147169	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300002558\|JGI25385J37094_10117549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300003995\|Ga0055438_10004359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2566	Open in IMG/M
3300004025\|Ga0055433_10173024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300004268\|Ga0066398_10176767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300004633\|Ga0066395_10104536	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300005179\|Ga0066684_10481061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	834	Open in IMG/M
3300005186\|Ga0066676_10570632	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	767	Open in IMG/M
3300005434\|Ga0070709_11065189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300005450\|Ga0066682_10429714	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	842	Open in IMG/M
3300005467\|Ga0070706_100087334	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2891	Open in IMG/M
3300005468\|Ga0070707_100584031	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1080	Open in IMG/M
3300005518\|Ga0070699_100259957	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300005536\|Ga0070697_101310664	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300005553\|Ga0066695_10877428	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300005554\|Ga0066661_10021866	All Organisms → cellular organisms → Bacteria	3415	Open in IMG/M
3300005713\|Ga0066905_102140482	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300005718\|Ga0068866_10939318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300006031\|Ga0066651_10583560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300006163\|Ga0070715_10051781	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300006852\|Ga0075433_10812005	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	817	Open in IMG/M
3300006871\|Ga0075434_100585239	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1135	Open in IMG/M
3300006914\|Ga0075436_100046423	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300007265\|Ga0099794_10667589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300009012\|Ga0066710_102181587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	810	Open in IMG/M
3300009038\|Ga0099829_10097876	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300009038\|Ga0099829_11178934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300009089\|Ga0099828_11112272	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300009090\|Ga0099827_11341825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	622	Open in IMG/M
3300009147\|Ga0114129_12232878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	658	Open in IMG/M
3300009792\|Ga0126374_11846354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300010047\|Ga0126382_11057669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	716	Open in IMG/M
3300010047\|Ga0126382_12516065	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300010358\|Ga0126370_12453648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	519	Open in IMG/M
3300010359\|Ga0126376_10597567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1043	Open in IMG/M
3300010359\|Ga0126376_12435824	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300010360\|Ga0126372_10240905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1544	Open in IMG/M
3300010360\|Ga0126372_12224952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	597	Open in IMG/M
3300010362\|Ga0126377_10753930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1029	Open in IMG/M
3300010362\|Ga0126377_12329384	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300010366\|Ga0126379_10642919	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1150	Open in IMG/M
3300010373\|Ga0134128_11304618	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	800	Open in IMG/M
3300010376\|Ga0126381_103923019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300010376\|Ga0126381_104781292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300010391\|Ga0136847_10452586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1353	Open in IMG/M
3300010398\|Ga0126383_10792588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1030	Open in IMG/M
3300012137\|Ga0137346_1041030	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	621	Open in IMG/M
3300012189\|Ga0137388_10800104	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300012199\|Ga0137383_11233158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300012203\|Ga0137399_11372910	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300012206\|Ga0137380_10613539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	950	Open in IMG/M
3300012350\|Ga0137372_10403335	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1035	Open in IMG/M
3300012353\|Ga0137367_10766301	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300012354\|Ga0137366_10294768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1195	Open in IMG/M
3300012358\|Ga0137368_10075420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2712	Open in IMG/M
3300012361\|Ga0137360_10083112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2408	Open in IMG/M
3300012922\|Ga0137394_10425961	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1130	Open in IMG/M
3300012927\|Ga0137416_10068673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2562	Open in IMG/M
3300012930\|Ga0137407_10482372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1156	Open in IMG/M
3300012971\|Ga0126369_10263512	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1703	Open in IMG/M
3300014269\|Ga0075302_1010896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1517	Open in IMG/M
3300014885\|Ga0180063_1117976	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	822	Open in IMG/M
3300015053\|Ga0137405_1058995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	928	Open in IMG/M
3300016319\|Ga0182033_10325049	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1278	Open in IMG/M
3300017959\|Ga0187779_10963358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	590	Open in IMG/M
3300021333\|Ga0210324_1033393	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300021560\|Ga0126371_12138574	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300021560\|Ga0126371_13567208	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300025325\|Ga0209341_10609546	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	854	Open in IMG/M
3300025560\|Ga0210108_1003180	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2803	Open in IMG/M
3300025906\|Ga0207699_11253269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300025910\|Ga0207684_11632089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300025941\|Ga0207711_10439227	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1214	Open in IMG/M
3300026309\|Ga0209055_1015376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3830	Open in IMG/M
3300026315\|Ga0209686_1100287	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1005	Open in IMG/M
3300026327\|Ga0209266_1095544	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1311	Open in IMG/M
3300026358\|Ga0257166_1056735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	562	Open in IMG/M
3300026376\|Ga0257167_1035596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	749	Open in IMG/M
3300026498\|Ga0257156_1052422	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	840	Open in IMG/M
3300026547\|Ga0209156_10304490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300026551\|Ga0209648_10348613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1020	Open in IMG/M
3300027577\|Ga0209874_1159791	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300027654\|Ga0209799_1003342	All Organisms → cellular organisms → Bacteria	3250	Open in IMG/M
3300027875\|Ga0209283_10594600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300027882\|Ga0209590_10975614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300028536\|Ga0137415_10016081	All Organisms → cellular organisms → Bacteria	7421	Open in IMG/M
3300028792\|Ga0307504_10132545	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	829	Open in IMG/M
3300028792\|Ga0307504_10379922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300031231\|Ga0170824_126671788	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	754	Open in IMG/M
3300031573\|Ga0310915_10643706	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	750	Open in IMG/M
3300031740\|Ga0307468_100523369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	947	Open in IMG/M
3300031747\|Ga0318502_10187574	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1193	Open in IMG/M
3300031748\|Ga0318492_10518633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	633	Open in IMG/M
3300031751\|Ga0318494_10043625	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300031770\|Ga0318521_10835961	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	562	Open in IMG/M
3300031781\|Ga0318547_10153892	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1353	Open in IMG/M
3300031821\|Ga0318567_10666266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300031860\|Ga0318495_10041448	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300031959\|Ga0318530_10485087	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300032009\|Ga0318563_10611496	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300032068\|Ga0318553_10121189	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1344	Open in IMG/M
3300032180\|Ga0307471_101766552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	771	Open in IMG/M
3300033004\|Ga0335084_10438153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1344	Open in IMG/M
3300033407\|Ga0214472_10733182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300034165\|Ga0364942_0030971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1710	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.39%
Host-Associated	Host-Associated	5.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.85%
Aquatic	Environmental → Aquatic	6.54%
Plants	Host-Associated → Plants	5.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.67%
Marine	Environmental → Aquatic → Marine	3.74%
Sediment	Environmental → Aquatic → Sediment	1.87%
Freshwater	Environmental → Aquatic → Freshwater	0.93%
Floodplain	Environmental → Terrestrial → Floodplain	0.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.16%
Loam	Environmental → Terrestrial → Soil → Loam	14.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.87%
Lake	Environmental → Aquatic → Freshwater → Lake	0.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.93%
Sand	Environmental → Terrestrial → Soil → Sand	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.93%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.93%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.93%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.74%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.93%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.93%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.93%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.93%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.93%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012137	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT560_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300021333	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.191 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034165	Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_100088971	3300000550	Soil	FVPIFLEKELFSPAPQGAYAGSWTANTRHGAAWLSLWDDRVSRGLDPASFRAVKAFDLLLEGDEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFVVKRLGDSAPVAPGPIYFDIRH*
JGI1027J12803_1071471691	3300000955	Soil	AAWLSLRDDRVSRGLDPATFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVDMNFVVKRLGGSAPVAPGPIYFDIRH*
JGI25385J37094_101175491	3300002558	Grasslands Soil	AYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0055438_100043591	3300003995	Natural And Restored Wetlands	VAAVRSHQFVPLFLEKELFSPPPEGAYGGSWTASSRDGTTWLSLWDDRAARGLDPATFCAVKAFDLMLEGPGALGAFAGIVGVLRAQGIRHLLIPLPAESYACALLTPFASEVIDMNFVVKGLRGSSPVRPGPIYFDIRH*
Ga0055433_101730241	3300004025	Natural And Restored Wetlands	FSPPPEGAYGGSWTASSRDGTTWLSLWDDRAARGLDPATFCAVKAFDLMLEGPGALGAFAGIVGVLRAQGIRHLLIPLPAESYACALLTPFASEVIDMNFVVKGLRGSSPVRPGPIYFDIRH*
Ga0066398_101767671	3300004268	Tropical Forest Soil	MDLRLAAVGSHHFVPLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH*
Ga0066395_101045363	3300004633	Tropical Forest Soil	LWDDRIARGLDPAAFRAVKGFDLMLDGPGALNAFAGVVSVLRARGIRHLLIPVPAESYACGLLTPFAAEVVDMNHMVKRLGGSPPVPPGPTYFDIRH*
Ga0066684_104810611	3300005179	Soil	TGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0066676_105706322	3300005186	Soil	VHSHHFVPIFLEKELFSPAPDGAYAGSWTANTRHGAAWLSLRDDRVSRGLDPATFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACSLLSPFAAEVVDLNFVVKRLGGSAPVAPGPIYFDIRH*
Ga0070709_110651891	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GSWTANSRHGAAWLSLRDDRVARGLDPASFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFVVKRLGDSAPVAPGPIYFDIRH*
Ga0066682_104297141	3300005450	Soil	AGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0070706_1000873341	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AYAGSWTANSRHGAAWVSLRDDRVLRGLDPATFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVDMNFVVKRLGGSAPVAPGPIYFDIRH*
Ga0070707_1005840311	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LFSPPPDGAYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMMEGEALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDESGPVPPGPLFFDIRH*
Ga0070699_1002599573	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AWLSLWDDRPSRGLDPFAFRAVKAFDVMMEGEALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0070697_1013106642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LLDLRMAAVRSHHFVPVFLEKELFSPPPEGAYAGSWTANSRHGAAWLSLRDDRVSRGLDPASFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVDMNFVVKRLGGSAPVAPGPIYFDIRH*
Ga0066695_108774281	3300005553	Soil	LEKELFSPAPAGSYAGSWSAISRRGSAWLSLWDDRAARGLDPFAFRAVKAFDLMLEGPDALGAFASLLGVLRERGVRQLLVPLPAASATCVLLRPFATDVVDFNFVVKRLPDGPTVPAGPFYFDIRH*
Ga0066661_100218665	3300005554	Soil	VFLERELFSPPPDGAYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0066905_1021404821	3300005713	Tropical Forest Soil	PQGSYAGSYAASTRHGTAWLSLWDDRAARGLDPASFRTVKAFDLVLEGNQALNAFAGLVGVLRASGIRHVLVPLPAESYARALLGPYAADLVDLNFAVKRLDGRPAIDSGPIYFDVRH*
Ga0068866_109393181	3300005718	Miscanthus Rhizosphere	EGAYAGSWTANTRHGVAWVSLWDDRVSRGLDPASFRAVKAFDLLLEGDEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFVVKRLGDSAPVAPGPIYFDIRH*
Ga0066651_105835601	3300006031	Soil	AVQSHHFVPVFLERELFSPPPDGAYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0070715_100517811	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	TRHGVAWVSLWDDRVSRGLDPASFRAVKAFDLLLEGDEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFAVKRLGDSAPVAPGPIYFDIRH*
Ga0075433_108120052	3300006852	Populus Rhizosphere	FSPAPEGAYAGSWTANTRHGAAWLSLQDDRVARGLDPASFGVVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLTPFAAEVVDMNFVVKRLGDSAPVAPGPIYFDIRH*
Ga0075434_1005852391	3300006871	Populus Rhizosphere	FVPVFLERELFSPPPDGAYTGSWTAGERTGTAWLSLWDDRPSRGLDPFAFRAVKAFDVMMEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0075436_1000464234	3300006914	Populus Rhizosphere	AYAGSWTASNRHGAAWLSLWDDRIARGLDPQTFGAVKAFDLMLEGPGALNAFAGLVGVLRAGGIRHLLIPLPAESYACGLLTPFAAEVVDMNFVVKRLGGSPPVPPGPVYFDIRH*
Ga0099794_106675891	3300007265	Vadose Zone Soil	WLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0066710_1021815872	3300009012	Grasslands Soil	FLERELFSPPPDGAYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0099829_100978764	3300009038	Vadose Zone Soil	ERTGTAWLSLWDDRPARRLDPFAFRAVKAFDVMLEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0099829_111789342	3300009038	Vadose Zone Soil	RSHHFVPVFLENELFSPAPEGMYAGSWTANTRHGAAWLSIRDDRVSRGLDPASFRAVKAFDLLLEGSEALKAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFGAEVVDMNFVVKRLGDSLPVAPGPIYFDIRH*
Ga0099828_111122721	3300009089	Vadose Zone Soil	SYAGSWTAISRGGTAWLSLWDDRAVRGLDPSAFRAVKAFDLMLDGPDSLSAFASLVGVLRERGIRQLLVPLPAESATCALLRPFAAEVVDFNFVVKRLRDSPPVPVGPLYFDIRH*
Ga0099827_113418251	3300009090	Vadose Zone Soil	NTRHGAAWLSIRDDRVSRGLDPASFRAVKAFDLLLEGSEALKAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVDMNFVVKRLGDSPPVAPGSIYFDIRH*
Ga0114129_122328781	3300009147	Populus Rhizosphere	LFSPAPEGAYAGSWTASNRHGAAWLSLWDDRIARGLDPQTFGAVKAFDLMLEGPGALNAFAGLVGVLRAGGIRHLLIPLPAESYACGLLTPFAAEVVDMNFVVKRLGGSPPVPPGPVYFDIRH*
Ga0126374_118463541	3300009792	Tropical Forest Soil	VMDLRLAAVRSHHFVPLFLEKELFSPAPEGAYAGSLTASNRHGAAWLSLWDDRIARGLDPAAFGAVKGFDLVLEGPGALNAFAGLVDVLRARGIKYLLMPLPAESHACGLLKPFAVEVVDMNHVVKRLGGSPPVPPGPTYFDIRH*
Ga0126382_110576691	3300010047	Tropical Forest Soil	MRLRLAAVQSHHFAPLYLEEELFSPAPAGSYAGSWTAISRGGTAWLSLWDDRATRGLDTVAFRAVKAFDLMLEGPDSLHAFASLVGVLRARGVRQLLVPVAAESAACAQLRPFAVEVVDFNFVVKRLGDSPPVPAGPLYFDIRH*
Ga0126382_125160652	3300010047	Tropical Forest Soil	AYAGSWTASNRHGAAWLSLWDDRIARGLDPATFRAVKAFDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLTPYAAEVVDMNFMVKRLGGSPPVPSGPIYFDIRH*
Ga0126370_124536481	3300010358	Tropical Forest Soil	FRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHVLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH*
Ga0126376_105975672	3300010359	Tropical Forest Soil	WDDRIARGLDPATFRAVKAFDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLTPYAAEVVDMNFVVKRLGGSPPVPSGPIYFDIRH*
Ga0126376_124358242	3300010359	Tropical Forest Soil	WDDRIARGLDPATFRAVKAFDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLTPYAAEVVDMNFWVKRLGGSPPVPSGPVYFDIRH*
Ga0126372_102409053	3300010360	Tropical Forest Soil	FSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLLLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDLNFMVKRLGESHPVPSGPIYFDIRH*
Ga0126372_122249522	3300010360	Tropical Forest Soil	FSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH*
Ga0126377_107539302	3300010362	Tropical Forest Soil	GSWTASNRHGAAWLSLWDDRIARGFDPEAFRAVKAFDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLTPYAAEVVDMNFVVKRLGGSPPVPSGPIYFDIRH*
Ga0126377_123293841	3300010362	Tropical Forest Soil	HHFVPLFLEKELFSPAPQGAYAGSWTASNRHGAAWLSLWDDRIARGLDPATFRAVKAFDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLTPYAAEVVDMNFWVKRLGGSPPVPSGPVYFDIRH*
Ga0126379_106429191	3300010366	Tropical Forest Soil	PLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH*
Ga0134128_113046182	3300010373	Terrestrial Soil	PEGAYAGSWTANTRHGVAWVSLWDDRVSRGLDPASFRAVKAFDLLLEGDEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFAVKRLGDSAPVAPGPIYFDIRH*
Ga0126381_1039230192	3300010376	Tropical Forest Soil	DLRLAAVGSHDFVPLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRIARGLDPAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYVAEVVDMNFMVKRLAGSPPVPSGPIYFDIRH*
Ga0126381_1047812921	3300010376	Tropical Forest Soil	LRLAAVGSHHFVPLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRIARGLDPAAFRAVKAYDLVLEGPAALNAFAGLVAALRERGIQHLLLPLPSESYACNLLTPYAPEVVNMNFAVKRLGGSPPVPSGPIYFDIRH*
Ga0136847_104525863	3300010391	Freshwater Sediment	VWDDRAARGVDRFAFRAVKAFDLMLEGPEALGAFASLVGVLRARGVRPLLVPLSAESAACAMPRPFAADLVDFNFVVKRLGDQPPVPPGRLYFDIRH*
Ga0126383_107925882	3300010398	Tropical Forest Soil	FLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH*
Ga0137346_10410302	3300012137	Soil	FAPRLLERELFSPAPLGAYAGSWTAISHRGTAWLSVWDDRAARGLDPFTFRAVKAFDLMLEGPEALSAFASLVRVQRARGVRQFLVPMPAESAACAMLRPFAADLVDFNFVVKRLGDRAPVPPGPLYFDIRH*
Ga0137388_108001042	3300012189	Vadose Zone Soil	AISRGGTAWLSLWDDRAARGLDTVAFRAVKAFDLMLEGPDSLRAFASLVGVLRARGVRQLLVPLAAKSAACALLRPFAAEVVDFNFVVKRLGDSPPVPAGPLYFDIRH*
Ga0137383_112331581	3300012199	Vadose Zone Soil	SPAPEGTYAGSWTANTRHGAAWLSIRDDRVSRGLDPASFSAVKAFDLLLEGSEALKAFAGLVGVLRAGGIRHLLIPLPAQSHACALLSPFAAEVVDMNFVAKRLGDSAPVAPGLIYFDIRH*
Ga0137399_113729102	3300012203	Vadose Zone Soil	VFLERELFSPPPDGAYTGSWTAGERTGTAWLSLWDDRPSRGLDPFAFRAVKAFDVMMEGPEALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0137380_106135392	3300012206	Vadose Zone Soil	RLRLSAVQSHHFVPLYLERELFSPAPAGSYAGSWTSISRGGTAWLSLWDDRAARGLDPVAFRAVKAFDLMLEGPDSLRAFASLVGVLRARGVRQLLVPLAAESAACALLRPFAVEVVDFNFVVKRLGDSPPVPAGPLYFDIRH*
Ga0137372_104033351	3300012350	Vadose Zone Soil	GSYAGSWTSISRGGTAWLSLWDDRAARGLDTVAFRAVKAFDLMLEGPDSLRAFASLVGVLRARGVRQLLVPLAAESAACALLRPFAVEVVDFNFVVKRLGDSPPVPAGPLYFDIRH*
Ga0137367_107663012	3300012353	Vadose Zone Soil	QPLHFAPVFLERELFSPPPAGAYAGSWTASTRRGTAWLSIWDDRPTRRLDPFDFRAVKAFDFMLEGAEPLTAFTNLIGVLAQRGVRQLLVPLPAESAACSMLRPFAGEVVDFNFVVKRLRGSDPVPPGPLYFDIRH*
Ga0137366_102947682	3300012354	Vadose Zone Soil	AVQSHQFVPLFLEQELFSPAPVGSYAGSWTAIGRGGTAWLSLWDDRAVRGLDPSAFRAVKAFDLMLDGPDSLSAFASLVGVLRERGIRQLLVPLPAESATCARLRPFAAEVRDFNFVVKRLRDSLPVPAGPLYFDIRH*
Ga0137368_100754204	3300012358	Vadose Zone Soil	PPPAGAYAGSWTASTRRGTAWLSIWDDRPTRRLDPFDFRAVKAFDFMLEGAEPLTAFTNLIGVLAQRGVRQLLVPLPAESAACSMLRPFAGEVVDFNFVVKRLRGSDPVPPGPLYFDIRH
Ga0137360_100831121	3300012361	Vadose Zone Soil	RTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMMEGEALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRLFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0137394_104259612	3300012922	Vadose Zone Soil	GTAWLSLWDDRAARGLDPVTFGAVKAFDLMLEGPEALGAFASIVGALRTGGIRHLLIPLPAESYACALLTPFAAEVVDMNFVVKRLRGCSPVPPGPIYFDIRH*
Ga0137416_100686734	3300012927	Vadose Zone Soil	FVPLFLEQELFSPAPVASYAGSWTAISRGGTAWLSLWDDRAVRGFDPSAFRAVKAFDLMLDGPDSLSAFASLVGVLREQGIRQLLVPLPAESATCALLRPFAAEVVDFNFVVKRLRDSPPVPAGPLYFDIRH*
Ga0137407_104823722	3300012930	Vadose Zone Soil	TAGERTGTAWLSLWDDRPSRGLDPFAFRAVKAFDVMMEGPEALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH*
Ga0126369_102635123	3300012971	Tropical Forest Soil	MELRLAAVRPHHFVPLFLEKELFSPAPEGAYAGSLTASNRHGAAWLSLWDDRIARGLDPAAFRAVKGFDLMLDGPGALNAFAGVVSVLRARGIRHLLIPVPAESYACGLLTPFAAEVVDMNHMVKRLGGSPPVPPGPTYFDIRH*
Ga0075302_10108961	3300014269	Natural And Restored Wetlands	ARGLDPATFCAVKAFDLMLEGPGALGAFAGIVGALHTRGIRHLLIPLPAESYACALLTPFASEVIDMNFVVKRLRGCSPVRPGPIYFDIRH*
Ga0180063_11179762	3300014885	Soil	PEGTYAGSWTAISRRGTAWLSLWDDRAARGLDPFAFRAVKAFDLMLEGPEALGAFASLVGVLRARGIRQLLLPLPAESAACAMLRPFAADVVDFNFVVKRLGDSAPVPPGPLYFDIRH*
Ga0137405_10589951	3300015053	Vadose Zone Soil	MYAGSWTANTRHGAAWLSIRDDRVSRGLDPASFRAVKAFDLLLEGSEALKAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVDMNFVVKRLGDSPPVAPGPIYFDIRH*
Ga0182033_103250491	3300016319	Soil	RTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0187779_109633582	3300017959	Tropical Peatland	GSWTAITPGGSAWLSLWDDRAARQLDPFAFRAVKAFDLMLEGPDPLRAFAAIAGTLYLQGARQLLLPLPAESAACAMLRPFACEIVELNYIVKRLGGAAPVPPGPLYFDIRH
Ga0210324_10333932	3300021333	Estuarine	HLLRLRVAAARSHHFVPLFLEKELFSPPPEGAYAGSWTASSRDGTAWLSLWDDRISRGLDPATFSALKAFDLMLEGPEALKAFAGVVNALRTSGVRHLLVPLPAESFACALLRPFAAEVVDMNFVVKRLGGRPPVRPGRIYFDIRH
Ga0126371_121385742	3300021560	Tropical Forest Soil	EKELFSPAPEGAYAGSLTASNRHGAAWLSLWDDRIARGLDPAAFGAVKGFDLVLEGPGALNAFAGLVDVLRARGIKYLLMPLPAESYACGLLTPFAVEVVDMNHMVKRLGGSPPVPFGPTYFDIRH
Ga0126371_135672082	3300021560	Tropical Forest Soil	PLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0209341_106095461	3300025325	Soil	LFSPAPEGAYAGSWTAISRRGTAWLSLWDDRAARGLDPFAFRAVKAFDLMLEGPEALGAFASLVGVLRTRGVRQLLVPLPAESAACAMLRPFAADLVDFNFVVKRLGDSAPVPPGPLYFDIRH
Ga0210108_10031801	3300025560	Natural And Restored Wetlands	RVARGLDPATFCAVKAFDLMLEGPGALGAFAGIVGALHTRGIRHLLIPLPAESYACALLTPFASEVIDMNFVVKRLRGCSPVRPGPIYFDIRH
Ga0207699_112532692	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	EGAYAGSWTANSRHGAAWLSLRDDRVARGLDPASFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFVVKRLGDSAPVAPGPIYFDIRH
Ga0207684_116320892	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AYAGSWTANSRHGAAWVSLRDDRVLRGLDPATFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVDMNFVVKRLGGSAPVAPGPIYFDIRH
Ga0207711_104392271	3300025941	Switchgrass Rhizosphere	DDRVARGLDPASFGAVKAFDLLLEGSEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFVVKRLGDSAPVAPGPIYFDIRH
Ga0209055_10153761	3300026309	Soil	TGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0209686_11002872	3300026315	Soil	MAPIREAGRRASAQGPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0209266_10955442	3300026327	Soil	GAYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0257166_10567351	3300026358	Soil	GSWTAGERTGTAWLSLWDDRPSRGLDPFAFRAVKAFDVMMEGEALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0257167_10355961	3300026376	Soil	TGSWTAGERTGTAWLSLWDDRPSRGLDPFAFRAVKAFDVMMEGPEALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0257156_10524221	3300026498	Soil	FSPAPEGAYAGSWTANTRHGVAWLSLRDDRVSRGLDPASFRAVKAFDLLLEGDEALNAFAGLVGVLRAGGIRHLLIPLPAESHACALLSPFAAEVVEMNFVVKRLGDSAPVAPGPIYFDIRH
Ga0209156_103044902	3300026547	Soil	GERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMIEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0209648_103486132	3300026551	Grasslands Soil	WTAISRGGTAWLSLWDDRAARGLDTVAFRAVKAFDLMLEGPDSLRAFASLVGVLRARGVRQLLVPLAAESAACALLRPFAAEVVDFNFVVKRLGDSPPVPAGPLYFDIRH
Ga0209874_11597912	3300027577	Groundwater Sand	RSGTAWLSLWDDRPARRLDPFAFRAVKAFDIMLEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0209799_10033421	3300027654	Tropical Forest Soil	GAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0209283_105946001	3300027875	Vadose Zone Soil	SYAGSWTAISRGGTAWLSLWDDRAVRGLDPSAFRAIKAFDLMLDGPDSLSAFASLVGVLRERGIRQLLVPLPAESATCALLRPFAAEVVDFNFVVKRLRDSPPVPVGPLYFDIRH
Ga0209590_109756141	3300027882	Vadose Zone Soil	ISRGGTAWLSLWDDRAVRGLDPSAFRAVKAFDLMLDGPDSLSAFASLVGVLRERGIRQLLVPLPAESATCARLRPFAAEVVDFNFVVKRLRDSPPVPAGPLYFDIRH
Ga0137415_100160811	3300028536	Vadose Zone Soil	FVPLFLEQELFSPAPVASYAGSWTAISRGGTAWLSLWDDRAVRGFDPSAFRAVKAFDLMLDGPDSLSAFASLVGVLREQGIRQLLVPLPAESATCALLRPFAAEVVDFNFVVKCLRDSPPVPAGPLYFDIRH
Ga0307504_101325452	3300028792	Soil	VASYAGSWTAISRGGTAWLSLWDDRAVRGLDPSAFRAVKAFDLMLDGPDSLSAFASLVGVLRERGIRQLLVPLPAESATCALLRPFAAEVVDFNFVVKRLRDSPPVPAGPLYFDIRH
Ga0307504_103799221	3300028792	Soil	ERELFSPPPDGAYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMVEGREALAAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0170824_1266717881	3300031231	Forest Soil	RMAAVRSHHFVPIFLEKELFSAAPEGAYAGSWTANTRHGVAWVSLWDDRVSRGLDPASFRAVKAFDLLLEGDEALNAFAGLVGVLRAGGIRHLLMPLPAESHACALLSPFAAEVVEMNFVVKRLGDSAPVAPGPIYFDIRH
Ga0310915_106437062	3300031573	Soil	YAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318493_101657342	3300031723	Soil	LDPAAFRAVKGFDLMLDGPGALNAFAGLVGVLRARGIRHLLIPVPAESYACGLLTPFAVEVVDMNHMVKRLGGSPPVPPGPTYFDIRH
Ga0307468_1005233691	3300031740	Hardwood Forest Soil	WLSLWDDRAARGLDTVAFRAVKAFDLMLEGPDALRAFASLVGVLRARGVRQLLVPLPAESAACALLRPFAAEVVDFNFVVKRLGNSPNVPAGPLYFDIRH
Ga0318502_101875741	3300031747	Soil	MDLRLAAVGSHHFVPLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318492_105186332	3300031748	Soil	KELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318494_100436254	3300031751	Soil	PPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318521_108359612	3300031770	Soil	KELFSPAPEGGYAGSLTASNRDGAAWLSLWDDRIARGLDPAAFRAVKGFDLMLDGPGALNAFAGVVSVLRSRGIRHLLIPVPAESYACGLLTPFAVEVVDMNHMVKRLGGSPPVPPGPTYFDIRH
Ga0318547_101538921	3300031781	Soil	LWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318567_106662661	3300031821	Soil	LEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318495_100414481	3300031860	Soil	VMDLRLAAVGSHHFVPLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318530_104850871	3300031959	Soil	RGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318563_106114961	3300032009	Soil	SHHFVPLFLEKELFSPAPPGAYAGSWTASNRHGAAWLSLWDDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0318553_101211891	3300032068	Soil	DDRTARGLDLAAFRAVKAYDLVLEGPGALNAFAGLVAALRERGIRHLLLPLPAESYACGLLRPYAAEVVDMNFMVKRLGESHPVPAGPIYFDIRH
Ga0307471_1017665522	3300032180	Hardwood Forest Soil	PVFLERELFSPPPEGAYTGSWTAGERTGTAWLSLWDDRPARGLDPFAFRAVKAFDVMMEGREALDAFTNLAGVLRLHGVRQLLVPLPAESAACAMLRPFAEEIVDLNFVVKCLDDSGPVPPGPLFFDIRH
Ga0335084_104381532	3300033004	Soil	SYAGSYTASTRHGTAWLSLWDDREARGLDPATFSALKAFDLVLEGSQALNAFAGLVGVLRAGGIRHLLVPLPAESYARALLGPFAADLVDLNFVVKRLDGRAPIDPGPIYFDIRH
Ga0214472_107331821	3300033407	Soil	LFSPAPEGAYAGSWTAISRRGTAWLSLWDDRAARGLDPFAFRAVKAFDLMLEGPEALGAFASLVGVLRARGVRQLLVPLPAESAACAMLRPFAADLVDFNFVVKRLGDSAPVPPGPLYFDIRH
Ga0364942_0030971_1251_1685	3300034165	Sediment	MRLRLAAVQSNHFAPVRLERELFSPAPEGAYAGSWTAISRRGTAWLSVWDDRAARGLDPYAFRAVKAFDLMLEGPEALGAFASLVGVLRARGVRQLLVPLRAESAACAMLRPFAADLVDFNFVVKRLGDSPPVPPGPLYFDIRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092811

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences