Metagenome Family F092776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092776
Family Type	Metagenome
Number of Sequences	107
Average Sequence Length	103 residues
Representative Sequence	LDHYDVLRHVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARGRYVRPSVSEDDFD
Number of Associated Samples	69
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.22 %
% of genes near scaffold ends (potentially truncated)	37.38 %
% of genes from short scaffolds (< 2000 bps)	89.72 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.551 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.299 % of family members)
Environment Ontology (ENVO)	Unclassified (41.121 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.879 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.33% β-sheet: 10.45% Coil/Unstructured: 55.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF02775	TPP_enzyme_C	11.21
PF14312	FG-GAP_2	10.28
PF13948	DUF4215	1.87
PF02874	ATP-synt_ab_N	0.93
PF01855	POR_N	0.93
PF00150	Cellulase	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.93
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.93
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.93
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.55 %
Unclassified	root	N/A	36.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.55 %
Unclassified	root	N/A	36.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.55 %
Unclassified	root	N/A	36.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.45 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	16.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.93 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.45 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	16.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.93 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.45 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	16.82 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.93 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.45 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	16.82 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.93 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.45 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	16.82 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.93 %
Phragmitibacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Phragmitibacter	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.45 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	16.82 %
Phragmitibacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Phragmitibacter → Phragmitibacter flavus	0.93 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105414977	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105603544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1153	Open in IMG/M
3300001431\|F14TB_100839721	All Organisms → cellular organisms → Bacteria	3894	Open in IMG/M
3300001431\|F14TB_102309931	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1275	Open in IMG/M
3300005332\|Ga0066388_100059672	All Organisms → cellular organisms → Bacteria	4026	Open in IMG/M
3300005332\|Ga0066388_100262457	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300005332\|Ga0066388_100407221	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300005332\|Ga0066388_100643813	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300005332\|Ga0066388_100753064	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300005332\|Ga0066388_100839348	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300005332\|Ga0066388_101571868	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300005332\|Ga0066388_102493948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	940	Open in IMG/M
3300005332\|Ga0066388_104151230	Not Available	738	Open in IMG/M
3300005332\|Ga0066388_104174686	Not Available	736	Open in IMG/M
3300005332\|Ga0066388_104558422	Not Available	705	Open in IMG/M
3300005332\|Ga0066388_106006867	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005332\|Ga0066388_106318704	Not Available	598	Open in IMG/M
3300005347\|Ga0070668_101192199	Not Available	690	Open in IMG/M
3300005713\|Ga0066905_100051716	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300005713\|Ga0066905_100131381	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300005713\|Ga0066905_100988583	Not Available	741	Open in IMG/M
3300005713\|Ga0066905_100991436	Not Available	740	Open in IMG/M
3300005764\|Ga0066903_100253777	All Organisms → cellular organisms → Bacteria	2718	Open in IMG/M
3300005764\|Ga0066903_100590166	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300005764\|Ga0066903_100638571	Not Available	1857	Open in IMG/M
3300005764\|Ga0066903_101558789	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1250	Open in IMG/M
3300005764\|Ga0066903_101866852	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300005764\|Ga0066903_103027067	Not Available	910	Open in IMG/M
3300005764\|Ga0066903_103251593	Not Available	878	Open in IMG/M
3300005764\|Ga0066903_109120640	Not Available	501	Open in IMG/M
3300006163\|Ga0070715_10632025	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300009455\|Ga0114939_10071611	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300009792\|Ga0126374_10068454	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300009792\|Ga0126374_10145164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1429	Open in IMG/M
3300010043\|Ga0126380_10011369	All Organisms → cellular organisms → Bacteria	4011	Open in IMG/M
3300010043\|Ga0126380_10404774	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300010048\|Ga0126373_10470955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1294	Open in IMG/M
3300010359\|Ga0126376_10703186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	973	Open in IMG/M
3300010359\|Ga0126376_12173656	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010359\|Ga0126376_12389900	Not Available	575	Open in IMG/M
3300010361\|Ga0126378_12241761	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010362\|Ga0126377_10706987	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300010362\|Ga0126377_13050378	Not Available	541	Open in IMG/M
3300010366\|Ga0126379_13485360	Not Available	527	Open in IMG/M
3300010376\|Ga0126381_101555569	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300010376\|Ga0126381_102240987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	785	Open in IMG/M
3300010376\|Ga0126381_102930051	Not Available	679	Open in IMG/M
3300010398\|Ga0126383_10174559	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300012948\|Ga0126375_10135704	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300015371\|Ga0132258_10409938	All Organisms → cellular organisms → Bacteria	3368	Open in IMG/M
3300015371\|Ga0132258_10482151	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300015371\|Ga0132258_11335920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Phragmitibacter → Phragmitibacter flavus	1811	Open in IMG/M
3300015372\|Ga0132256_100598559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1217	Open in IMG/M
3300015372\|Ga0132256_103150129	Not Available	555	Open in IMG/M
3300016294\|Ga0182041_10780062	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300016319\|Ga0182033_10474701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1071	Open in IMG/M
3300016319\|Ga0182033_11618013	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300016357\|Ga0182032_11966647	Not Available	513	Open in IMG/M
3300016387\|Ga0182040_10574629	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300016404\|Ga0182037_12143448	Not Available	503	Open in IMG/M
3300016422\|Ga0182039_12184024	Not Available	511	Open in IMG/M
3300017959\|Ga0187779_10474886	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300017959\|Ga0187779_11276532	Not Available	519	Open in IMG/M
3300020583\|Ga0210401_11238706	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300021478\|Ga0210402_10515645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1110	Open in IMG/M
3300021560\|Ga0126371_11100595	Not Available	934	Open in IMG/M
3300025905\|Ga0207685_10490144	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300025916\|Ga0207663_11422421	Not Available	558	Open in IMG/M
3300025923\|Ga0207681_11181746	Not Available	643	Open in IMG/M
3300025925\|Ga0207650_11586918	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300025930\|Ga0207701_10652421	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300025972\|Ga0207668_11451738	Not Available	619	Open in IMG/M
3300027897\|Ga0209254_10377644	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300027900\|Ga0209253_10310560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1221	Open in IMG/M
3300031543\|Ga0318516_10808592	Not Available	529	Open in IMG/M
3300031544\|Ga0318534_10186335	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300031546\|Ga0318538_10507227	Not Available	654	Open in IMG/M
3300031549\|Ga0318571_10137576	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300031572\|Ga0318515_10106208	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300031640\|Ga0318555_10547205	Not Available	627	Open in IMG/M
3300031681\|Ga0318572_10328976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	905	Open in IMG/M
3300031682\|Ga0318560_10059671	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300031765\|Ga0318554_10143342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1354	Open in IMG/M
3300031779\|Ga0318566_10345747	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031799\|Ga0318565_10387505	Not Available	678	Open in IMG/M
3300031805\|Ga0318497_10109685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1487	Open in IMG/M
3300031854\|Ga0310904_10966212	Not Available	605	Open in IMG/M
3300031860\|Ga0318495_10237711	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031893\|Ga0318536_10654634	Not Available	524	Open in IMG/M
3300031910\|Ga0306923_11154360	Not Available	831	Open in IMG/M
3300031954\|Ga0306926_10329705	Not Available	1888	Open in IMG/M
3300031981\|Ga0318531_10279890	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	754	Open in IMG/M
3300032001\|Ga0306922_10159760	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300032010\|Ga0318569_10560306	Not Available	532	Open in IMG/M
3300032043\|Ga0318556_10086162	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300032044\|Ga0318558_10570131	Not Available	566	Open in IMG/M
3300032065\|Ga0318513_10110990	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1290	Open in IMG/M
3300032066\|Ga0318514_10119336	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1351	Open in IMG/M
3300032068\|Ga0318553_10450509	Not Available	674	Open in IMG/M
3300032089\|Ga0318525_10289029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	842	Open in IMG/M
3300032089\|Ga0318525_10386413	Not Available	718	Open in IMG/M
3300032164\|Ga0315283_10303773	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300032177\|Ga0315276_11262339	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300032261\|Ga0306920_101978342	Not Available	817	Open in IMG/M
3300032261\|Ga0306920_102780437	Not Available	667	Open in IMG/M
3300032397\|Ga0315287_11330060	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300033289\|Ga0310914_11696014	Not Available	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.59%
Host-Associated	Host-Associated	8.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.98%
Plants	Host-Associated → Plants	8.41%
Aquatic	Environmental → Aquatic	5.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.98%
Freshwater	Environmental → Aquatic → Freshwater	5.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.07%
Loam	Environmental → Terrestrial → Soil → Loam	28.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.61%
Lake	Environmental → Aquatic → Freshwater → Lake	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	23.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.61%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.87%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	23.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054149772	3300000364	Soil	LDHYDVLRHEPRPVRSRFELAAVRIADAWLAAGHAKASADDLQIAGDFLAQVGCNVRELPGVLVQFEDEDGRVEEMSREVAILLAFRRLVARL
INPhiseqgaiiFebDRAFT_1056035442	3300000364	Soil	VLRNVPRPVQSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEEGRVEEMSREAAIVVAFRRLVARARPARDGSFED*
F14TB_1008397212	3300001431	Soil	LDHYDVRRNIPREVETRFELAAVRLAESWLAAKRVTASADDLKIARDFLEQVGCNVRELPGVLVQLEDEAGNVEEMSREAAVLVAFRRLVAHHRPGRPSGSSD*
F14TB_1023099311	3300001431	Soil	CVAATPGSCAERHIYPAATVESGGGSRLDHYDVLRIAPRAVETRFELAAVRLAESWLAAKRGTASADDLKIARDFLEQVGCNVRELPGVLVRLEDEAGHVQEMSREAALLVALRRLVAHHRPGRTSGTSDD*
Ga0066388_1000596722	3300005332	Tropical Forest Soil	LDHYDVLRNVPRRVRSRFELAAARIADAWLAAGQVKASAADLQIARDFLEQVGCNVRELPGVLVRLENEDGSIEDMSREAAILVAFRRLVARLRPGGGGSDG*
Ga0066388_1002624573	3300005332	Tropical Forest Soil	LDHYDVVRNVPRPVESRFELAAVRIADAWLAAGKIKASADDLQIARDFLQQVGCNVRELPGVLVRLEDEDGRVEEMSREAAILEAFRRLVARGRHVR
Ga0066388_1004072212	3300005332	Tropical Forest Soil	LDHYDVLRNLPRPVQSRFELAVVRLADAWLATGRVTASADDLKIARDYLEQVGWNVRELPGVLVRLEDEDGHVEELSREAVILVAFRRLVARLRGSRGTDLDD*
Ga0066388_1006438132	3300005332	Tropical Forest Soil	LDHYDVLRNVPRPVESRFELAAARIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEQGRVEQMSREAAVLEAFRRLVARRRHLRPTSPEDGLD*
Ga0066388_1007530642	3300005332	Tropical Forest Soil	DGGGRRVDHYDVLRIVPRPVESRFELAAVRLAEGWLAAKRVTASADDLRIARDFLELVGCNVRELPGVLVQIEDEDGRVQEMSREAAILLAFRRLVAHHRPGRTSTTSAD*
Ga0066388_1008393481	3300005332	Tropical Forest Soil	LDHYDVLRNVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEEGRVEEMSREAAIVIAFRRLVARARPARDDSFDD*
Ga0066388_1015718682	3300005332	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVRLEDEDGRVEEMSREAAIVEAFRRLVARGRYVRPSVSDDFD*
Ga0066388_1024939481	3300005332	Tropical Forest Soil	VDHYDVLRNVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIVVAFRRLVARGRLTRGDELED*
Ga0066388_1041512302	3300005332	Tropical Forest Soil	VDHYDVLRNVPRQVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEDGRVVEMSREAAIVVAFRRLVARGRSLPDGPLDD*
Ga0066388_1041746862	3300005332	Tropical Forest Soil	VDHYDVLRYVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEDGRVEEMSREAAIVVAFRRLVARGRSLPDGPLDD*
Ga0066388_1045584221	3300005332	Tropical Forest Soil	TRLDHYDVLRYVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRVLPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARGRYVRPSVSSEDDFD*
Ga0066388_1060068671	3300005332	Tropical Forest Soil	VDHYDVLRIVPRPVESRFELAAVRLAEGWLAARRVTASADDLRIARDFLEQVGCNVRELPGVLVQIVDEDGRMQEMSREAAMLLAFRRLVARLRPARPAALDD*
Ga0066388_1063187042	3300005332	Tropical Forest Soil	TVGSGGGGWLDHYDVLRNTPRAVETRFELAAVRLAESWLAAKRVTASADDLKIARDFLEQVGCNVRELPGVLVQLEDEAGHVEEMSREAAILVAFRRLVAHHRPGRASGSSD*
Ga0070668_1011921992	3300005347	Switchgrass Rhizosphere	LDHYDVIRQGPPRAVESRFELAAVRLAERWLATGRMTVSADDMRIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLVAYLRDGRPRRVAR*
Ga0066905_1000517162	3300005713	Tropical Forest Soil	LDHYDVLRNVPRPVESRFELAAVRIADAWLAAGEIKASADDLQIARDFLQQVGCNVRELPGVLVRLEDEDGRVEEMSREAAILEAFRRLVARDRHVRPPARDDEFD*
Ga0066905_1001313812	3300005713	Tropical Forest Soil	VDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARVRYVRPPVSEDDFD*
Ga0066905_1009885832	3300005713	Tropical Forest Soil	VDHYDVLRHVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQAGCNVRELPGVLVRLEDEDGRVEEMSREAAIVVAFRRLVARGRSLPDGPLND*
Ga0066905_1009914362	3300005713	Tropical Forest Soil	VDHYDVLRYVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEDGRVEEMSREAAIVVAFRRLVASGRSLPDGPLDD*
Ga0066903_1002537772	3300005764	Tropical Forest Soil	VDHYDVLRNVPRPVRSRFELAAVRIADAWLASGHAKASSDDLRLARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIVVAFRRLVARGRLTRGNELED*
Ga0066903_1005901662	3300005764	Tropical Forest Soil	LDHYDVLRNVPRPVESRFELAAVRIADAWLAAGQIKASADDLQIARDFLQQVGCNVRELPGVLVRLEDEDGRVEEMSREAAILEAFRRLVARGRHVRPPARDDDLD*
Ga0066903_1006385712	3300005764	Tropical Forest Soil	VDHYDVLRNVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIVIAFRRLVARGRLLPDSTLDD*
Ga0066903_1015587892	3300005764	Tropical Forest Soil	VDHYDVLRHVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIVVAFRRLVARGRSLPDGHFDD*
Ga0066903_1018668522	3300005764	Tropical Forest Soil	LDHYDVLRNVPRPVRSRFELAAVRIADAWLASGRAKASADDLQMARDFLEQVGCNVRDLPGVLVRLEDEEGRVEEMSREAAIVVAFRRLVARARPARDGSFDD*
Ga0066903_1030270672	3300005764	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARARYVRPTVSEDDFD*
Ga0066903_1032515932	3300005764	Tropical Forest Soil	LDHYDVLRNVPRPVESRFELAAVRIADAWLAAGQIKASADDLQIARDFLQQVGCNVRELPGVLVRLEDEDGRVEEMSREAAILEAFRRLVARGRHVRPAARDDDLD*
Ga0066903_1091206402	3300005764	Tropical Forest Soil	RFELAAVRIADAWLAARRVKASADDLQIARDFLKQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARARCVRPSVSEDDFD*
Ga0070715_106320251	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LDHYDVLRIIPRPVQSRFELAAVRIADAWLAAGHAKASPDDLKMARDFLQQVGCNVRDLPGVLVRIEDEDGRVEEMSREAAIVVAFRRLVARKRPDRAGVLDD*
Ga0114939_100716112	3300009455	Groundwater	LDHLDVIRQGPPRTVESRFELAAVRLAERWIASGRVTVSADDLKIAGDFLEQAGCNVRQLPGMLVRFEDEHGHVAEISREAALLLAFRRLVARARVAR*
Ga0126374_100684542	3300009792	Tropical Forest Soil	LDHYDVVRNVPRPVESRFELAAVRIADAWLAAGQIKASADDLQIARDFLQQVGCNVRELPGVLVRLEDEDGRVEEMSREAAILEAFRRLVARGRHVRPAARDDEFD*
Ga0126374_101451642	3300009792	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLENEDGRVEEMSREAAILEAFRRLVARARCMRPSISEDDFD*
Ga0126380_100113692	3300010043	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARARCMRPSISEDDFD*
Ga0126380_104047742	3300010043	Tropical Forest Soil	VDHYDVLRHVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEDGRVVEMSREAAIVVAFRRLVARGRSLPDGPLDD*
Ga0126373_104709552	3300010048	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLKQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARARCVRPSVSEDDFD*
Ga0126376_107031862	3300010359	Tropical Forest Soil	RFELAAVRLAEGWLAARRVTASADDLRIARDFLEQVGCNVRELPGVLVQVVDEDGRMQEMSREAALLLAFRRLVARLRPARPAALDD*
Ga0126376_121736561	3300010359	Tropical Forest Soil	LDHYDVLRNVPRPVRSRFELAAVRIADAWLAAGQAKASAADLQIARDFLEQVGCNVRELPGVLVRLENEDGSIEEMSREAAILVAFRRLVARLRAAG
Ga0126376_123899001	3300010359	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARVRYVRPSVSEDDFD*
Ga0126378_122417611	3300010361	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEHGRVEEMSREAAIIEAFRRLVARARCMRPSISEDDFD*
Ga0126377_107069872	3300010362	Tropical Forest Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARGRYARPSVSEDDFD*
Ga0126377_130503781	3300010362	Tropical Forest Soil	VDHYDVLRNVPRPVRSRFELAAVRLADAWIATGRVTASADDLRIARDYLEQVGWNVRELPGVLVQLEDADGRVEQMSREAVILVAFRRLVSRMRGSRGTDLED*
Ga0126379_134853602	3300010366	Tropical Forest Soil	VDHYDVLRYVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEDGRVEEMSREAAIVVAFRRLVASRRSLPDGAVDD*
Ga0126381_1015555692	3300010376	Tropical Forest Soil	LDHYDVLRHVPRPVESRFELAAVRIADAWLAARRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARARYVRPTVSEDDFD*
Ga0126381_1022409871	3300010376	Tropical Forest Soil	RPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARVRYVRPSVSEDDFD*
Ga0126381_1029300511	3300010376	Tropical Forest Soil	SRFELAAVRIADAWLAAGHAKASHDDLQLARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIVIAFRRLVARGRLTRGNELED*
Ga0126383_101745593	3300010398	Tropical Forest Soil	VDHYDVLRYVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEDGRVEEMSREAAIVVAFRRLVARGRSLPDGP
Ga0126375_101357042	3300012948	Tropical Forest Soil	VDHYDVLRHVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNARELPGVLVQLEDEYGRVEEMSREAAIVVAFRRLVASRRSLPDGAVDD*
Ga0132258_104099382	3300015371	Arabidopsis Rhizosphere	VDHYDVLRIVPRPVQSRFELAAVRLADTWLATGRVTASADDLRIARDYLEQVGWNVRELPGVLVQLEDQDGRVEEMSREAAILVAFRRLVARLRGSRGTDLEG*
Ga0132258_104821512	3300015371	Arabidopsis Rhizosphere	LDHHDVIRQGPPRAVESRFELAAVRLAERWLATGRMTVSADDMRIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLVAYLRDGRPRRVAR*
Ga0132258_113359203	3300015371	Arabidopsis Rhizosphere	LDHYDVLRIIPRAVETRFELAAVRLAESWLAAGRVTASADDLKIARDFLEQVGCNVRELPGVLVQLEDEAGHVEEMSREAAILVAFRRLVAHHRLGRPSGSSD*
Ga0132256_1005985592	3300015372	Arabidopsis Rhizosphere	LDHHDVIRQGPPRAVESRFELAAVRLAERWLATGRMTVSADDMRIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLVAHLRDGRPRRLAR*
Ga0132256_1031501292	3300015372	Arabidopsis Rhizosphere	PVQSRFELAAVRLADTWLATGRVTASADDLRIARDYLEQVGWNVRELPGVLVQLEDQDGRVEEMSREAAILVAFRRLVARLRGSRGTDLEG*
Ga0182041_107800622	3300016294	Soil	LDHYDVLRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0182033_104747012	3300016319	Soil	VDHYDVLRHVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQLARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIVVAFRRLVARGRLTRGDELED
Ga0182033_116180132	3300016319	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLATRRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPSVSQDDFD
Ga0182032_119666472	3300016357	Soil	GSVRSRGASSVDHYDVLRHVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQLARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIVVAFRRLVARGRLTRGDELED
Ga0182040_105746292	3300016387	Soil	LDHYDVVRYVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPSVSQDDFD
Ga0182037_121434482	3300016404	Soil	RHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0182039_121840241	3300016422	Soil	YDVVRHVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMTREAAIIEAFRRLVARGRYVRPSVSEDDFD
Ga0187779_104748862	3300017959	Tropical Peatland	VDHYDVLRNVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARGRHVRPVSHDDELD
Ga0187779_112765321	3300017959	Tropical Peatland	LDHYDVLRYVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEEGRVEEMSREAAILEAFRRLVARGRHTRPSVSADDFD
Ga0210401_112387062	3300020583	Soil	LDHYDVLRHVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARGRYVRPSVSEDDFD
Ga0210402_105156452	3300021478	Soil	LDHYDVLRHVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRDLPGVLVQLEDEEGRVEEMSREAAILEAFRRLVARARYARPSVSGHDLD
Ga0126371_111005952	3300021560	Tropical Forest Soil	VDHYDVLRYVPRPVRSRFELAAVRIADAWLAAGHAKASADDLQMARDFLEQVGCNVRELPGVLVRLEDEDGRVEEMSREAAIVVAFRRLVARGRSLPDGPLDD
Ga0207685_104901441	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LDHYDVLRIIPRPVQSRFELAAVRIADAWLAAGHAKASPDDLKMARDFLQQVGCNVRDLPGVLVRIEDEDGRVEEMSREAAIVVAFRRLVARKRPDRAGVLDD
Ga0207663_114224212	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	RSDGVSSLDHYDVLRIIPRPVQSRFELAAVRIADAWLAAGHAKASADDLKMARDFLQQVGCNVRDLPGVLVRIEDEDGRVEEMSREAAIVVAFRRLVARKRPDRAGVLDD
Ga0207681_111817462	3300025923	Switchgrass Rhizosphere	LRLIRWGYADLDHHDVIRQGPPRAVESRFELAAVRLAERWLATGRMTVSSDDMKIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLVAYLRDGRPRRVAR
Ga0207650_115869182	3300025925	Switchgrass Rhizosphere	LDHHDVIRQGPPRAVESRFELAAVRLAERWLATGRMTVSADDMRIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLV
Ga0207701_106524212	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VESRFELAAVRLAERWLATGRMTVSADDMRIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLVAYLRDGRPRRVAR
Ga0207668_114517381	3300025972	Switchgrass Rhizosphere	DLDHYDVIRQGPPRAVESRFELAAVRLAERWLATGRMTVSADDMRIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLVAYLRDGRPRRVAR
Ga0209254_103776442	3300027897	Freshwater Lake Sediment	VDHYDVFRHKPPRAVESRFELAAMRLAERWLAAGRVTVSSDDLRIARDFLEQVGCNVRELPGVVVQFEDEHGHVEQMSREAALLAALRRLVAHLRDTPVESKGR
Ga0209253_103105602	3300027900	Freshwater Lake Sediment	LSRRRHANLDHHDVIRQGPPRAVESRFELAAVRLAERWLANGRVTVSSDDMKIARDFLEQVGCNVRELPGVLIRFEDEHGHVEEVSRETALLLAFRRLVSRLRDGRSRLPR
Ga0318516_108085921	3300031543	Soil	LDHYDVVRYVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPTVSEDDFD
Ga0318534_101863352	3300031544	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPTVSEDDFD
Ga0318538_105072271	3300031546	Soil	LDHYDVLRHVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPTVSEDDFD
Ga0318571_101375762	3300031549	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318515_101062082	3300031572	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318555_105472051	3300031640	Soil	YDVVRYVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPTVSEDDFD
Ga0318572_103289761	3300031681	Soil	APVVRHEGATRLDHYDVVRYVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPTVSEDDFD
Ga0318560_100596712	3300031682	Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318554_101433422	3300031765	Soil	LSAEGATGLDHYDVVRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318566_103457471	3300031779	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEHGRVEEMSREAAIIEAFRR
Ga0318565_103875051	3300031799	Soil	RPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPSVSQDDFD
Ga0318497_101096852	3300031805	Soil	GLDHYDVVRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0310904_109662122	3300031854	Soil	VIRQGPPRAVESRFELAAVRLAERWLATGRMTVSADDMRIARDFLEQAGCNVRELPGVLVRVEDEHGHVEEMSRETALLLAFRRLVAYLRDGRPRRVAR
Ga0318495_102377111	3300031860	Soil	LDHYDVVRYVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARGRYARPSVSEDDFD
Ga0318536_106546341	3300031893	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEHGRVEEMSREAAIIEAFRRLVARGRYVRPTVSEDDFD
Ga0306923_111543602	3300031910	Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLATRRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPSVSQDDFD
Ga0306926_103297052	3300031954	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEHGRVEEMSREAAIIEAFRRLVARGRYVRPPVSEDDFD
Ga0318531_102798901	3300031981	Soil	RPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0306922_101597603	3300032001	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLVDEDGRVEEMSREAAILEAFRRLVARGRYARPSVSEDDFD
Ga0318569_105603062	3300032010	Soil	HVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPPVSEDDFD
Ga0318556_100861621	3300032043	Soil	AEGATGLDHYDVVRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLVDEDGRVEEMSREAAILEAFRRLVARGRYARPSVSEDDFD
Ga0318558_105701311	3300032044	Soil	LDHYDVLRYVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318513_101109902	3300032065	Soil	DVLRHVPRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318514_101193362	3300032066	Soil	LDHYDVVRYVPRPVESRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318553_104505092	3300032068	Soil	TRLDHYDVLRHVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEHGRVEEMSREAAIIEAFRRLVARGRYVRPPVSEDDFD
Ga0318525_102890291	3300032089	Soil	HYDVLRHVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEQMSREAAILEAFRRLVARRRYVRPSGSEDDFD
Ga0318525_103864132	3300032089	Soil	PRPVESRFELAAVRIADAWLAAGCIKASADDLQIARDFLEQVGCNVRELPGVLVQLVDEDGRVEEMSREAAILEAFRRLVARGRYARPSVSEDDFD
Ga0315283_103037732	3300032164	Sediment	VESRFELAAVRLAERWLANGRVTVSSDDMKIARDFLEQVGCNVRELPGVLIRFEDEHGHVEEVSRETALLLAFRRLVAQLRNGRARLPR
Ga0315276_112623392	3300032177	Sediment	VESRFELAAVRLAERWLANGRVTVSSDDMKIARDFLEQVGCNVRELPGVLIRFEDEHGHVEEVSRETALLLAFRRLVAQLRNGRARLAR
Ga0306920_1019783422	3300032261	Soil	LDHYDVLRHVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEHGRVEEMSREAAIIEAFRRLVARGRYVRPPVSEDDFD
Ga0306920_1027804372	3300032261	Soil	SRFELAAVRIADAWLAAGRIKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPTVSEDDFD
Ga0315287_113300602	3300032397	Sediment	VDHYDVFRHKPPRAVESRFELAAMRLAERWLAAGRVTVSSDDLRIARDFLEQVGCNVRELPGVIVQFEDEHGHVEQMSREAALLAALRRLVAHLRDTPV
Ga0310914_116960142	3300033289	Soil	LDHYDVVRHVPRPVESRFELAAVRIADAWLAAGRVKASADDLQIARDFLEQVGCNVRELPGVLVQLEDEDGRVEEMSREAAIIEAFRRLVARGRYVRPPVSEDDFD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F092776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences