Metagenome / Metatranscriptome Family F092666

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092666
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	130 residues
Representative Sequence	RDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Number of Associated Samples	81
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	91.59 %
% of genes from short scaffolds (< 2000 bps)	89.72 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.944 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.579 % of family members)
Environment Ontology (ENVO)	Unclassified (40.187 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.140 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 8.40% Coil/Unstructured: 91.60%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00211	Guanylate_cyc	28.04
PF13432	TPR_16	2.80
PF03466	LysR_substrate	1.87

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	28.04

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.88 %
Unclassified	root	N/A	41.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.88 %
Unclassified	root	N/A	41.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.94 %
Unclassified	root	N/A	41.12 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.34 %
Unclassified	root	N/A	41.12 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.80 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.63 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.87 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.93 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.48 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.61 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.87 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.87 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.93 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.61 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	3.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.80 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.87 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %
Chlorophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.61 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	3.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Solimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas	1.87 %
CS clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade	0.93 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.93 %
Actinomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae	0.93 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.93 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.61 %
Microvirga ossetica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	3.74 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.93 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.93 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.93 %
Mobiluncus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Mobiluncus	0.93 %
Chlamydomonadales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.61 %
Microvirga ossetica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	3.74 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Deinococcus ficus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus ficus	0.93 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.93 %
Mobiluncus curtisii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Mobiluncus → Mobiluncus curtisii	0.93 %
Chlamydomonadaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Chlamydomonadaceae	0.93 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.61 %
Microvirga ossetica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	3.74 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Streptomyces sp. S4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. S4	0.93 %
Chlamydomonas	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Chlamydomonadaceae → Chlamydomonas	0.93 %
Deinococcus ficus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus ficus	0.93 %
Mobiluncus curtisii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Mobiluncus → Mobiluncus curtisii	0.93 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.61 %
Microvirga ossetica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	3.74 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	1.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.87 %
Chlamydomonas reinhardtii	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Chlamydomonadaceae → Chlamydomonas → Chlamydomonas reinhardtii	0.93 %
Streptomyces sp. S4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. S4	0.93 %
Deinococcus ficus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus ficus	0.93 %
Mobiluncus curtisii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Mobiluncus → Mobiluncus curtisii	0.93 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10554112	Not Available	519	Open in IMG/M
3300000559\|F14TC_106827663	Not Available	590	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10013606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2238	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10155572	Not Available	548	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1011731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1672	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1061963	Not Available	663	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10118194	Not Available	555	Open in IMG/M
3300002911\|JGI25390J43892_10073434	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300004268\|Ga0066398_10120761	Not Available	629	Open in IMG/M
3300005332\|Ga0066388_104679145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. S4	696	Open in IMG/M
3300005332\|Ga0066388_104816143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	686	Open in IMG/M
3300005363\|Ga0008090_10172357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	500	Open in IMG/M
3300005363\|Ga0008090_15431979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus ficus	517	Open in IMG/M
3300005435\|Ga0070714_101039300	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300005447\|Ga0066689_10421070	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300005561\|Ga0066699_10345327	All Organisms → cellular organisms → Bacteria → Proteobacteria	1063	Open in IMG/M
3300005586\|Ga0066691_10330213	All Organisms → cellular organisms → Bacteria → Proteobacteria	902	Open in IMG/M
3300005764\|Ga0066903_100009567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9127	Open in IMG/M
3300005764\|Ga0066903_106571233	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300005764\|Ga0066903_108391932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	527	Open in IMG/M
3300005764\|Ga0066903_108778074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales → Actinomycetaceae → Mobiluncus → Mobiluncus curtisii	513	Open in IMG/M
3300005983\|Ga0081540_1252634	Not Available	615	Open in IMG/M
3300006172\|Ga0075018_10092143	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300006173\|Ga0070716_100351343	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300006800\|Ga0066660_10477457	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300006852\|Ga0075433_11762628	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Chlamydomonadaceae → Chlamydomonas → Chlamydomonas reinhardtii	533	Open in IMG/M
3300009792\|Ga0126374_10196857	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300009792\|Ga0126374_10543649	All Organisms → cellular organisms → Bacteria → Proteobacteria	846	Open in IMG/M
3300009792\|Ga0126374_11100968	Not Available	630	Open in IMG/M
3300010043\|Ga0126380_10207665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1317	Open in IMG/M
3300010046\|Ga0126384_10314419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1293	Open in IMG/M
3300010046\|Ga0126384_11205900	Not Available	698	Open in IMG/M
3300010047\|Ga0126382_12415087	Not Available	511	Open in IMG/M
3300010048\|Ga0126373_11940551	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300010358\|Ga0126370_11373013	All Organisms → cellular organisms → Bacteria → Proteobacteria	666	Open in IMG/M
3300010359\|Ga0126376_10585852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300010361\|Ga0126378_10172238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2224	Open in IMG/M
3300010361\|Ga0126378_11629253	Not Available	733	Open in IMG/M
3300010362\|Ga0126377_10851528	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300010366\|Ga0126379_10480285	All Organisms → cellular organisms → Bacteria → Proteobacteria	1310	Open in IMG/M
3300010366\|Ga0126379_13394471	Not Available	533	Open in IMG/M
3300010376\|Ga0126381_100490004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1732	Open in IMG/M
3300010376\|Ga0126381_100571061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1605	Open in IMG/M
3300010376\|Ga0126381_104646843	Not Available	529	Open in IMG/M
3300010398\|Ga0126383_10160595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2110	Open in IMG/M
3300010398\|Ga0126383_12451165	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300011106\|Ga0151489_1150590	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300011120\|Ga0150983_10123215	Not Available	539	Open in IMG/M
3300012180\|Ga0153974_1034456	All Organisms → cellular organisms → Bacteria → Proteobacteria	1101	Open in IMG/M
3300012362\|Ga0137361_11762806	Not Available	538	Open in IMG/M
3300012930\|Ga0137407_10812069	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300012986\|Ga0164304_10358299	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300015373\|Ga0132257_103544510	Not Available	568	Open in IMG/M
3300016270\|Ga0182036_11470492	Not Available	571	Open in IMG/M
3300016294\|Ga0182041_10493406	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300016445\|Ga0182038_10564411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	979	Open in IMG/M
3300021479\|Ga0210410_11382742	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300021560\|Ga0126371_10756945	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300021560\|Ga0126371_12021579	Not Available	693	Open in IMG/M
3300025939\|Ga0207665_10303420	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300026524\|Ga0209690_1262851	Not Available	543	Open in IMG/M
3300027548\|Ga0209523_1120049	Not Available	543	Open in IMG/M
3300027654\|Ga0209799_1105410	Not Available	640	Open in IMG/M
3300031231\|Ga0170824_123989232	Not Available	541	Open in IMG/M
3300031549\|Ga0318571_10277792	Not Available	623	Open in IMG/M
3300031573\|Ga0310915_10475679	Not Available	888	Open in IMG/M
3300031573\|Ga0310915_11068559	Not Available	561	Open in IMG/M
3300031668\|Ga0318542_10320915	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300031679\|Ga0318561_10268889	All Organisms → cellular organisms → Bacteria → Proteobacteria	930	Open in IMG/M
3300031713\|Ga0318496_10225678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300031723\|Ga0318493_10559162	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300031723\|Ga0318493_10662423	Not Available	584	Open in IMG/M
3300031744\|Ga0306918_10187462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	1552	Open in IMG/M
3300031751\|Ga0318494_10943872	Not Available	506	Open in IMG/M
3300031763\|Ga0318537_10382208	Not Available	519	Open in IMG/M
3300031765\|Ga0318554_10599781	Not Available	621	Open in IMG/M
3300031771\|Ga0318546_10585541	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300031771\|Ga0318546_11296651	Not Available	511	Open in IMG/M
3300031779\|Ga0318566_10214564	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300031782\|Ga0318552_10060987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	1807	Open in IMG/M
3300031782\|Ga0318552_10637884	Not Available	543	Open in IMG/M
3300031805\|Ga0318497_10747788	Not Available	548	Open in IMG/M
3300031819\|Ga0318568_10564831	Not Available	709	Open in IMG/M
3300031896\|Ga0318551_10310998	All Organisms → cellular organisms → Bacteria → Proteobacteria	887	Open in IMG/M
3300031897\|Ga0318520_10918299	Not Available	551	Open in IMG/M
3300031947\|Ga0310909_10827824	Not Available	763	Open in IMG/M
3300031954\|Ga0306926_10263839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	2133	Open in IMG/M
3300031954\|Ga0306926_11473447	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300031959\|Ga0318530_10024404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2108	Open in IMG/M
3300031981\|Ga0318531_10189779	All Organisms → cellular organisms → Bacteria → Proteobacteria	925	Open in IMG/M
3300032008\|Ga0318562_10213567	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300032009\|Ga0318563_10717762	Not Available	537	Open in IMG/M
3300032010\|Ga0318569_10015873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2947	Open in IMG/M
3300032010\|Ga0318569_10385186	Not Available	654	Open in IMG/M
3300032010\|Ga0318569_10420212	Not Available	623	Open in IMG/M
3300032025\|Ga0318507_10085738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300032025\|Ga0318507_10426157	Not Available	577	Open in IMG/M
3300032041\|Ga0318549_10038722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga ossetica	1921	Open in IMG/M
3300032042\|Ga0318545_10081410	All Organisms → cellular organisms → Bacteria → Proteobacteria	1121	Open in IMG/M
3300032044\|Ga0318558_10021966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2594	Open in IMG/M
3300032068\|Ga0318553_10293073	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300032076\|Ga0306924_12437587	Not Available	526	Open in IMG/M
3300032090\|Ga0318518_10059133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1842	Open in IMG/M
3300033290\|Ga0318519_10841983	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.33%
Host-Associated	Host-Associated	4.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.39%
Plants	Host-Associated → Plants	3.74%
Aquatic	Environmental → Aquatic	0.93%
Fungi	Host-Associated → Fungi	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.87%
Sediment	Environmental → Aquatic → Sediment	0.93%
Mycelium	Host-Associated → Fungi → Mycelium	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.31%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	46.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.80%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.93%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.93%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_105541121	3300000363	Soil	ANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
F14TC_1068276632	3300000559	Soil	DPKCGVGKVRKLKTRRAANEGAIIGALPLGRTALVAPEPSVAAPSSTDAKDNDVPTPAVADSSAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDHRYLRGRYEQSWGRSW*
AF_2010_repII_A1DRAFT_100136062	3300000597	Forest Soil	VPTVGRATTTAETLPAPDVGATACEGDPSSRIDAKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDSRYLRGRYEQSWGRSW*
AF_2010_repII_A1DRAFT_101555721	3300000597	Forest Soil	ACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGTLPLGRIALVAPEPSAATPGPTDAANIDIPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW*
AF_2010_repII_A100DRAFT_10117312	3300000655	Forest Soil	TTAETPPAPDVGASTCEGDPSSRIDPKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDNRYLRGRYEQSWGRSW*
AF_2010_repII_A100DRAFT_10619631	3300000655	Forest Soil	SATACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSETPAPAVAIPQGSRAPKKARKSSRRTGGHDWAREWRVPGSQWSARAYAPDNPYXRGHYQPAWRSPW*
AF_2010_repII_A001DRAFT_101181941	3300000793	Forest Soil	SRIDPKCGAGKVRKLKTRRAANXGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDNRYLRGRYEQSWGRSW*
JGI25390J43892_100734341	3300002911	Grasslands Soil	SVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0066398_101207611	3300004268	Tropical Forest Soil	ETLPAPDVGATACEGDPSSRIDAKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDSRYLRGRYEQSWGRSW*
Ga0066388_1046791451	3300005332	Tropical Forest Soil	GKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0066388_1048161431	3300005332	Tropical Forest Soil	DAKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSPAASNPTDAANNDVPTLAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPAAQWSARAYAPDNRYLRGRYEQSWGRSW*
Ga0008090_101723571	3300005363	Tropical Rainforest Soil	MTAEVSPAPEGGATACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0008090_154319791	3300005363	Tropical Rainforest Soil	TVGRATTTAETPPAPDVGASTCEGDPSSRIDPKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDSRYLRGRYEQSWGRSW*
Ga0070714_1010393002	3300005435	Agricultural Soil	VTACEGDVSNRSDAKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0066689_104210702	3300005447	Soil	AIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTVGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0066699_103453272	3300005561	Soil	DSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0066691_103302132	3300005586	Soil	EISPVPEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0066903_10000956716	3300005764	Tropical Forest Soil	GDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSDVPAPAVAVPQGSRAPKKARKPSRRTGGRDWAREWRVPASQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0066903_1065712331	3300005764	Tropical Forest Soil	RAANEGAIIGALPLGRIALVAPEPSAATPAPGPTDAANSEIPAPAVANPQSPRATKKARKPARRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0066903_1083919321	3300005764	Tropical Forest Soil	AEVSPAPEGGATACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAAAPGPTDTANSDVPAPAVAIPQGSRAPKKARKSSRRTGGHDWTREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0066903_1087780741	3300005764	Tropical Forest Soil	TEVAPTVGRAAMTAEISPVPEDSVTACEGDASNRSDLKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSEIPAPTAANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARASAPDNPYLRGHYQPSWRSPW*
Ga0081540_12526342	3300005983	Tabebuia Heterophylla Rhizosphere	RIDAKCGAGKVRKVKTRRAANEGAIIGALPLGRTALVAPEPSASAPNPTDAANNDVPMPGVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDSRYLRGRYEQSWGRSW
Ga0075018_100921431	3300006172	Watersheds	CGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAAIPGPTDAANSEIPAPAVANPQSPRTQKKARKPSRRTGGRDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSAW*
Ga0070716_1003513431	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	EVAPTVGRAAMIAEISPVPEESVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0066660_104774572	3300006800	Soil	AAATNAEVAPTVGRAAMTAEISPTPGDSGTACEGDVPNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0075433_117626281	3300006852	Populus Rhizosphere	VRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0075425_1008972901	3300006854	Populus Rhizosphere	GAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0126374_101968572	3300009792	Tropical Forest Soil	PAPDVGATACEGDPSSRIDAKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDSRYLRGRYEQSWGRSW*
Ga0126374_105436492	3300009792	Tropical Forest Soil	MGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVAIPQSPRAPKKARKPSRRTGGHDWAREWRVPSSQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0126374_111009681	3300009792	Tropical Forest Soil	MGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSETPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0126380_102076651	3300010043	Tropical Forest Soil	LIIGGALVAKFGYEPATDGALLIAHGDAAGTHADTVPTVGRATTTADTSPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0126384_103144191	3300010046	Tropical Forest Soil	LIIGGALVAKFGYEPATDGALLIAHGDAAGTHADTVPTVGRATTTADTSPAQEGGATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVVDQPSPRAPKKVRKASRKTGGHDWSREWRLPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0126384_112059001	3300010046	Tropical Forest Soil	CEGDPSSRSDATCGAGKVRKLKSRRAANEGAIIGALPLGRSIALVAPEPSAAAPTATDVANSDVPMPAVADPPGARAPKKVRKASRRSGGHDWSREWRLPASQWSARAYAPDNRYLRGRYEPSWGRSW*
Ga0126382_115917252	3300010047	Tropical Forest Soil	NEGAIIGALPLGRTVLVAPEPSPAASNPTDAANNDVPTLAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPAAQWSARAYAPDNRYLRGRYEQSWGRSW*
Ga0126382_124150871	3300010047	Tropical Forest Soil	VPEGGATACEGDSSGRVDAKCGVAKVRKVKSRRAANEGATIAALPLGRTVLLAPEPSAADPSPTDAANSDVPTPAVADLPGPRAPKKKVRKASRRTGGHDWSREWRLPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0126373_119405512	3300010048	Tropical Forest Soil	GMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSDIPAPAVAIPQGSRAPKKARKSSRRTGGAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0126370_113730131	3300010358	Tropical Forest Soil	KLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSEIPAPTAANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARASAPDNPYLRGHYQPSWRSPW*
Ga0126376_105858521	3300010359	Tropical Forest Soil	LIIGGALVAKFGYEPATDGALLIAHGDAAGTHADTVPTVGRATTTADTSPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGHDWSREWRLPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0126376_107310282	3300010359	Tropical Forest Soil	VRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDNRYLRGRYEQSWGRSW*
Ga0126378_101722381	3300010361	Tropical Forest Soil	LIIGGALVAKFGYEPATDGALLIAHGDAAGTHADTVPTVGRATTTADTSPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVVDQPSPRAPKKVRKASRKTGGHDWSREWRLPASQWSAQ
Ga0126378_116292531	3300010361	Tropical Forest Soil	ACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0126377_108515281	3300010362	Tropical Forest Soil	ISPVPEDSVTACEGDASNRSDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVAIPQSPRAPKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGRYQPSWRSAW*
Ga0126379_104802852	3300010366	Tropical Forest Soil	GALLIAHGDAAGTHADTVPTVGRATTTADTSPAQEGGATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0126379_133944711	3300010366	Tropical Forest Soil	ACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSETPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0126381_1004900041	3300010376	Tropical Forest Soil	LIIGGALVAKFGYEPATDGALLIAHGDAAGTHADTVPTVGRATTTADTSPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTQAVADPPGSRAPKKVRKASRKTGGHDWSREWRLPASQWSAQAYAPDN
Ga0126381_1005710611	3300010376	Tropical Forest Soil	KCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW*
Ga0126381_1046468431	3300010376	Tropical Forest Soil	CEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSETPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0126383_101605951	3300010398	Tropical Forest Soil	ANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSEIPAPAVANPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPENPYLRGRYQSSWRSPW*
Ga0126383_124511651	3300010398	Tropical Forest Soil	IIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRATKKARKPARRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPAWRSPW*
Ga0151489_11505901	3300011106	Soil	RSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSVATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSAW
Ga0150983_101232151	3300011120	Forest Soil	GALLIAHGGDAATNTEVAPTFGRAAMTAEISPVTEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPFAATPGPTDAANSEIPAPAVVNPQSPRAAKKARKPSRRTGGRDWARDWRLPASQWSARAYAPDNPYLRGHYQPSGRSAW*
Ga0153974_10344562	3300012180	Attine Ant Fungus Gardens	GKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATLGPTDAANSELPAPAVANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0137361_117628061	3300012362	Vadose Zone Soil	KLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSGRSPW*
Ga0137407_108120691	3300012930	Vadose Zone Soil	PVPQDSVTACEGDVSNRSDAKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0164304_103582991	3300012986	Soil	KLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARAYAPDNRYLRGHYQPSWRSAW*
Ga0132257_1035445101	3300015373	Arabidopsis Rhizosphere	EASVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARAYAPDNPYLRGHYQPSWRSPW*
Ga0182036_114704921	3300016270	Soil	DPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPRGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0182041_104934062	3300016294	Soil	ACEGDVSNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSDIPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0182038_105644113	3300016445	Soil	LKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0210410_113827422	3300021479	Soil	IIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQGPRAAKKARKPSRRTGGRDWARDWRLPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0126371_107569452	3300021560	Tropical Forest Soil	HGDAAGTNADTVPTVGRATTTADTPPAPDVGATACEGDPSSRIDAKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDSRYLRGRYEQSWGRSW
Ga0126371_120215791	3300021560	Tropical Forest Soil	KCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSETPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0207665_103034201	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	EVAPTVGRAAMIAEISPVPEESVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0209690_12628511	3300026524	Soil	PEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATLGPTDAANSEIPAPAVANPQSPRTQKKARKPSRRTVGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0209523_11200491	3300027548	Forest Soil	MLRPHVQDHGAILAGLERPAGKGSEVEAENFGRAAMTAEISPTPEASVTACEGDVSNRSDAKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSLRSPW
Ga0209799_11054101	3300027654	Tropical Forest Soil	TTADTPPAPDVGATACEGDPSSRIDAKCGAGKVRKLKTRRAANEGAIIGALPLGRTVLVAPEPSAAAPNPTDAANNDVPTPAVADSPAPRAPKKVRKASRRTGGHDWSREWSLPASQWSARAYAPDSRYLRGRYEQSWGRSW
Ga0170824_1239892321	3300031231	Forest Soil	PVPEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLRRIALVAPEPSAATPGPTDAANSEIPAPAIANPQSPRTQKKARKPSRRTVGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0318571_102777921	3300031549	Soil	VEAAPTIGRAAMTAEVSSVPEGSATACEGDVSNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSDIPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0310915_104756791	3300031573	Soil	GALVAKFGYEPATDGALLIAHGDAAGTHADTVPTVGRATTTADTSPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW
Ga0310915_110685591	3300031573	Soil	TAEVSPVPEGSATACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPSPTDAANSDVPAPAVAIPQSSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGRYQPAWRSPW
Ga0318542_103209151	3300031668	Soil	VGRAAMTAEISPVPDGSVTACEGDVSNRSDAKCGVGKVHKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPADAADSETPAPAVANPQSSRAPKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSAW
Ga0318561_102688891	3300031679	Soil	NRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318496_102256782	3300031713	Soil	RDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318493_105591622	3300031723	Soil	IIGALPLGRIALVAPEPSAAAPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318493_106624231	3300031723	Soil	SPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW
Ga0306918_101874621	3300031744	Soil	VPEGSVTACEGDVSNRDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSVATPGPTDTANSETPAPAVANPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWGARAYAPDNPYLRGHYQPAWRSPW
Ga0318494_109438721	3300031751	Soil	VSPVPEGSATACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPSPTDAANSDVPAPAVAIPQSSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGRYQPAWRSPW
Ga0318537_103822081	3300031763	Soil	EVSPAPEGSATACEGDASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANIDVPAPAVATPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318554_105997811	3300031765	Soil	DASNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPSPTDAANSDVPAPAVAIPQSSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGRYQPAWRSPW
Ga0318546_105855412	3300031771	Soil	PTVGRTAMTAEISPTPADSVTACEGDVSNRSDAKCGVGKVRRLKSRRAANEGAIIGALPLGRIALVAPEPSGATPGPTDAANSEIPAPVVANPQSPRATKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0318546_112966511	3300031771	Soil	AIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318566_102145641	3300031779	Soil	AEVSLVPEGSVTACEGDVSNRDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSVATPGPTDTANSETPAPAVANPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWGARAYAPDNPYLRGHYQPAWRSPW
Ga0318552_100609871	3300031782	Soil	SNRDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSVATPGPTDTANSETPAPAVANPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWGARAYAPDNPYLRGHYQPAWRSP
Ga0318552_106378841	3300031782	Soil	SVTACEGDVSNRSDAKCGVGKVHKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPADAADSETPAPAVANPQSSRAPKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSAW
Ga0318497_107477881	3300031805	Soil	ISPTPADSVTACEGDVSNRSDAKCGVGKVRRLKSRRAANEGAIIGALPLGRIALVAPEPSGATPGPTDAANSEIPAPVVANPQSPRATKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0318568_105648311	3300031819	Soil	PAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPADAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW
Ga0318551_103109982	3300031896	Soil	ISPTPADSVTACEGDVSNRSDAKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAAPPGPTDAANIEIPAPAVANPQSPRTQKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSAW
Ga0318520_109182991	3300031897	Soil	PTPADSVTACEGDVSNRSDAKCGVGKVRRLKSRRAANEGAIIGALPLGRIALVAPEPSGATPGPTDAANSEIPAPVVANPQSPRATKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0310909_108278241	3300031947	Soil	PTVGRATTTADTSPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPADAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW
Ga0306926_102638392	3300031954	Soil	LKSRRAANEGAIIGALPLGRIALVAPEPSGATPGPTDAANSEIPAPVVANPQSPRATKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0306926_114734472	3300031954	Soil	SRRAANEGAIIGALPLGRIALVAPEPSVATPGPTDTANSETPAPAVANPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWGARAYAPDNPYLRGHYQPAWRSPW
Ga0318530_100244041	3300031959	Soil	DPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAAAPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318531_101897791	3300031981	Soil	KCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318562_102135672	3300032008	Soil	AEVSSVPEGSASACEGDVSNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318563_107177621	3300032009	Soil	KSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDTANSDVPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318569_100158733	3300032010	Soil	KCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSVATPGPTDTANSETPAPAVANPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWGARAYAPDNPYLRGHYQPAWRSPW
Ga0318569_103851862	3300032010	Soil	PEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPADAADSETPAPAVANPQSSRAPKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0318569_104202121	3300032010	Soil	ADTVPTVGRATTTADTSPAPEGDATACEGDAKCGVGKVRKLKNRRAANEGAIIGALPLGRVVLLAPEPSAAAPNPTDAANSDVPTPAVADPPGSRAPKKVRKASRKTGGRDWSREWRVPASQWSAQAYAPDNRYLRGRYDQSWGRPW
Ga0318507_100857382	3300032025	Soil	TAEISPTPADSVTACEGDVSNRSDAKCGVGKVRRLKSRRAANEGAIIGALPLGRIALVAPEPSGATPGPTDAANSEIPAPVVANPQSPRATKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0318507_104261571	3300032025	Soil	SNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSDIPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSP
Ga0318549_100387222	3300032041	Soil	CGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSVATPGPTDTANSETPAPAVANPQGSRAPKKARKPSRRAGGHDWARGWRVPGSQWGARAYAPDNPYLRGHYQPAWRSPW
Ga0318545_100814101	3300032042	Soil	AMTAEVSSVPEGSATACEGDVSNRDPKCGMGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPAPTDTANSDIPAPAVAIPQGSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGHYQPAWRSPW
Ga0318558_100219661	3300032044	Soil	AKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPADAADSETPAPAVANPQSSRAPKKARKPSRRTGGHDWAREWRVPASQWSARAYAPDNPYLRGHYQPSWRSAW
Ga0318553_102930731	3300032068	Soil	ISPVPEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARAYAPDNPYLRGHYQPSWRSPW
Ga0306924_124375871	3300032076	Soil	TEVAPTVGRAAMTAEISPVPEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARAYAPDNPYLRGHYQPSWRSAW
Ga0318518_100591331	3300032090	Soil	SRRAANEGAIIGALPLGRIALVAPEPSAATPSPTDAANSDVPAPAVAIPQSSRAPKKARKPSRRTGGHDWAREWRVPGSQWSARAYAPDNPYLRGRYQPAWRSPW
Ga0318519_108419831	3300033290	Soil	AEISPVPEDSVTACEGDASNRSDPKCGVGKVRKLKSRRAANEGAIIGALPLGRIALVAPEPSAATPGPTDAANSEIPAPAVANPQSPRAAKKARKPSRRTGGRDWAREWRLPASQWSARAYAPDNPYLRGHYQPSWRSAW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092666

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences