Metagenome / Metatranscriptome Family F092617

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092617
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	107 residues
Representative Sequence	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAAD
Number of Associated Samples	96
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.71 %
% of genes near scaffold ends (potentially truncated)	92.52 %
% of genes from short scaffolds (< 2000 bps)	86.92 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.047 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.822 % of family members)
Environment Ontology (ENVO)	Unclassified (27.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.402 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.32% β-sheet: 0.00% Coil/Unstructured: 39.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF01850	PIN	4.67
PF13640	2OG-FeII_Oxy_3	2.80
PF00106	adh_short	0.93
PF01402	RHH_1	0.93
PF08240	ADH_N	0.93
PF03729	DUF308	0.93
PF13577	SnoaL_4	0.93
PF13358	DDE_3	0.93
PF13683	rve_3	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.98 %
Unclassified	root	N/A	14.02 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.05 %
Unclassified	root	N/A	14.02 %
Viruses	superkingdom	All Organisms → Viruses	0.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.05 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.18 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.18 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.44 %
Unclassified	root	N/A	14.02 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	50.47 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	18.69 %
Unclassified	root	N/A	14.02 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.87 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.93 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.47 %
Unclassified	root	N/A	14.02 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	13.08 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5.61 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.93 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.93 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.47 %
Unclassified	root	N/A	14.02 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	13.08 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	3.74 %
unclassified Streptosporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae	0.93 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.93 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.93 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.47 %
Unclassified	root	N/A	14.02 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	13.08 %
Saccharopolyspora pogona	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	3.74 %
Kibdelosporangium philippinense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium philippinense	0.93 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	0.93 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.93 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103930243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1555	Open in IMG/M
3300001356\|JGI12269J14319_10183546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	844	Open in IMG/M
3300003218\|JGI26339J46600_10150212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300003368\|JGI26340J50214_10083579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300004479\|Ga0062595_101632385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300005329\|Ga0070683_100314277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	1491	Open in IMG/M
3300005541\|Ga0070733_10683547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300005578\|Ga0068854_100578794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	956	Open in IMG/M
3300005764\|Ga0066903_103486171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300005921\|Ga0070766_11029632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300006046\|Ga0066652_101847422	Not Available	544	Open in IMG/M
3300006059\|Ga0075017_101647741	Not Available	507	Open in IMG/M
3300006173\|Ga0070716_100218835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1278	Open in IMG/M
3300006573\|Ga0074055_11853057	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300006575\|Ga0074053_10018860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	708	Open in IMG/M
3300006804\|Ga0079221_10817863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300006904\|Ga0075424_100444431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1383	Open in IMG/M
3300009029\|Ga0066793_10793230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300009525\|Ga0116220_10176503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300009683\|Ga0116224_10306979	Not Available	755	Open in IMG/M
3300009683\|Ga0116224_10569537	Not Available	541	Open in IMG/M
3300009698\|Ga0116216_10914257	Not Available	525	Open in IMG/M
3300009700\|Ga0116217_10084391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	2199	Open in IMG/M
3300010048\|Ga0126373_12626347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300010326\|Ga0134065_10078229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1065	Open in IMG/M
3300010329\|Ga0134111_10195063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	817	Open in IMG/M
3300010373\|Ga0134128_11781211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300010379\|Ga0136449_100283534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3039	Open in IMG/M
3300010379\|Ga0136449_102036480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	846	Open in IMG/M
3300010398\|Ga0126383_13552421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300010876\|Ga0126361_10971700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1010	Open in IMG/M
3300010880\|Ga0126350_11278550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1547	Open in IMG/M
3300012199\|Ga0137383_11040084	Not Available	595	Open in IMG/M
3300012201\|Ga0137365_10404994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300012207\|Ga0137381_11056867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	699	Open in IMG/M
3300012207\|Ga0137381_11631456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300012350\|Ga0137372_10362115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1107	Open in IMG/M
3300012350\|Ga0137372_10509319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium philippinense	894	Open in IMG/M
3300012359\|Ga0137385_10002899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14808	Open in IMG/M
3300012359\|Ga0137385_10017556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	6373	Open in IMG/M
3300012359\|Ga0137385_11404345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300012362\|Ga0137361_10629548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	982	Open in IMG/M
3300012363\|Ga0137390_11492138	Not Available	617	Open in IMG/M
3300012924\|Ga0137413_11312733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300012948\|Ga0126375_11431107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300013307\|Ga0157372_10104877	All Organisms → Viruses → Predicted Viral	3233	Open in IMG/M
3300014969\|Ga0157376_10060624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3178	Open in IMG/M
3300015242\|Ga0137412_10858702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300015374\|Ga0132255_101293990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300015374\|Ga0132255_102505355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300016404\|Ga0182037_11184278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300017821\|Ga0187812_1060449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1266	Open in IMG/M
3300017926\|Ga0187807_1099378	Not Available	914	Open in IMG/M
3300017943\|Ga0187819_10535976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300017966\|Ga0187776_10235121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1166	Open in IMG/M
3300017972\|Ga0187781_10076013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2319	Open in IMG/M
3300017973\|Ga0187780_10218558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1330	Open in IMG/M
3300017973\|Ga0187780_10470489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	896	Open in IMG/M
3300018044\|Ga0187890_10705985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300018468\|Ga0066662_12504469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300020579\|Ga0210407_10240967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1408	Open in IMG/M
3300020581\|Ga0210399_10999743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	674	Open in IMG/M
3300021406\|Ga0210386_10156948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1906	Open in IMG/M
3300021444\|Ga0213878_10232273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300021479\|Ga0210410_11645925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	535	Open in IMG/M
3300021559\|Ga0210409_10206506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	1788	Open in IMG/M
3300025464\|Ga0208076_1071065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300025915\|Ga0207693_10150848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	1828	Open in IMG/M
3300025922\|Ga0207646_11198972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300025944\|Ga0207661_10363178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1308	Open in IMG/M
3300026819\|Ga0207765_113824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300027676\|Ga0209333_1196896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300027775\|Ga0209177_10215892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300027812\|Ga0209656_10086865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1670	Open in IMG/M
3300028784\|Ga0307282_10571221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	549	Open in IMG/M
3300031708\|Ga0310686_119462316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1817	Open in IMG/M
3300031779\|Ga0318566_10086344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1530	Open in IMG/M
3300031781\|Ga0318547_10818702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300031819\|Ga0318568_10882487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300031860\|Ga0318495_10023562	Not Available	2654	Open in IMG/M
3300031890\|Ga0306925_11035401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300031910\|Ga0306923_11563675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300031945\|Ga0310913_11134778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300032025\|Ga0318507_10169346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300032055\|Ga0318575_10268966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300032060\|Ga0318505_10157391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1055	Open in IMG/M
3300032060\|Ga0318505_10533242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300032063\|Ga0318504_10384417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300032076\|Ga0306924_11809339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300032160\|Ga0311301_11101961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1033	Open in IMG/M
3300032770\|Ga0335085_11581375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300032783\|Ga0335079_10098126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3323	Open in IMG/M
3300032783\|Ga0335079_11014430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	846	Open in IMG/M
3300032828\|Ga0335080_11904261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300032895\|Ga0335074_11330836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300032898\|Ga0335072_11237399	Not Available	660	Open in IMG/M
3300032954\|Ga0335083_11360043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300033134\|Ga0335073_10445687	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300033134\|Ga0335073_11186015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	768	Open in IMG/M
3300033158\|Ga0335077_10697050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300033289\|Ga0310914_10779454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300033803\|Ga0314862_0065315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	805	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.39%
Host-Associated	Host-Associated	5.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.92%
Aquatic	Environmental → Aquatic	7.48%
Plants	Host-Associated → Plants	5.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.92%
Freshwater	Environmental → Aquatic → Freshwater	6.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.80%
Sediment	Environmental → Aquatic → Sediment	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.95%
Loam	Environmental → Terrestrial → Soil → Loam	10.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.02%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.67%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.93%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.93%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.74%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.87%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.93%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.93%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.93%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.93%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.93%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1039302431	3300000955	Soil	VHPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITAKLRALRASGPVSVDTGRGRVLDVLQPYIDDLTRRKERGAR
JGI12269J14319_101835461	3300001356	Peatlands Soil	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASETVSVDTGRGRVLDVLQPYIDDLTRRNERGARRAAADIAIAVLFGLYECREDTDEDLLLVRMSLPGA
JGI26339J46600_101502121	3300003218	Bog Forest Soil	VVRPWKRQLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSVDAGQARVLDALQPYIDDLTWRKERGARRAAADIAIAVLLGLHGCRDDTDQDMLLVRMDL
JGI26340J50214_100835792	3300003368	Bog Forest Soil	VVSPWKRQLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSVDAGQARVLDALQPYIDDLTWRKERGARRAAADIAIAVLLGL
Ga0062595_1016323851	3300004479	Soil	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAVLLGLYQCRDDADEDMLLVRMGLPGAADDL
Ga0070683_1003142772	3300005329	Corn Rhizosphere	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAV
Ga0070733_106835471	3300005541	Surface Soil	MRPWKGRLSDDERFVLLSELLLRHPELVAEADEIISTLLVVEDDRELAGEITAKLRALRAGGPVSVDTGRGRVLDVLQPYIDDLTGRNERGAWRAAADIAIAVLFGLYECREDTDED
Ga0068854_1005787941	3300005578	Corn Rhizosphere	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDF
Ga0066903_1034861711	3300005764	Tropical Forest Soil	VGSRKRRLSDDEQSVLLSELLLRHPELAAEAEEITSALLVVNDQELTGEITTRLRALRPGRPVSVDAGRERVLEVLQPYIDDLARRKERGARRAAADIAIAVMLGLHECREDTDEDMLLVRMGLPG
Ga0070766_110296321	3300005921	Soil	VPGPQHPAATRSAKRHDGAVCPWKRRLSDEERSVLLSELLLRHPELVAEAEEITSALLVVENDQELADDITARLRALRPNGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAAGIAI
Ga0066652_1018474222	3300006046	Soil	VCPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQQLADEITARLRALRASGPVSVDTGRGQVLDVLQPYIDDLTR
Ga0075017_1016477412	3300006059	Watersheds	VCPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITAKLRALRASGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRA
Ga0070716_1002188353	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VSSWKRRLSDDERSVLLSELLFRHPELAAEAEQITCTLLLVENDQELADEITATLRALRSSGPVSVDAGQGRALGVLQPYIDDLIRRAEHGARRAAAD
Ga0074055_118530572	3300006573	Soil	VRPRKRRLSDHERSVLLSELLLRHPELVTEAEEITSTLLVVENDQELADEITARLRALRPSGPVSVDAGRARALDVLQPYIDDLTWRKQSGARRAATDIAIAVLLGLYECRDDTDEDMLLVRMGLPGAADD
Ga0074053_100188601	3300006575	Soil	VRPRKRRLSDHERSVLLSELLLRHPELVTEAEEITSTLLVVENDQELADEITARLRALRPSGPVSVDAGRARALDVLQPYIDDLTWRKQSGARRAATDIAIA
Ga0079221_108178632	3300006804	Agricultural Soil	VGSWKRRLSDDERSVLLSELLLRHPELAAETEEITSALLIVDDRELTGEITTRLRTLRLRGLVSVDAGRERVLEVLQPYVDDLTWRKERGARRAAADIAAA
Ga0075424_1004444311	3300006904	Populus Rhizosphere	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVADDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDFTRRKERGARRAAADIAI
Ga0066793_107932301	3300009029	Prmafrost Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQEFGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARRAAADIAIAVLSGLY
Ga0116220_101765031	3300009525	Peatlands Soil	VRPWKRRLSDAERSVLLSELLLRHPELVAEAEEITSALLVVEDDQELADEITARLRALRASGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAAGIATAVLFGRYECREDTDQDMLLVRMGLPGAA
Ga0116224_103069791	3300009683	Peatlands Soil	VRPWKRRLSDAERSVLLSELLLRHPELVAEAEEITSALLVVEDDQELADEITARLRALRASGPVSVDTGRGRVLDVLQPYIDDLTRR
Ga0116224_105695371	3300009683	Peatlands Soil	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASETVSVDTGRGRVLDVLQPYIGDLTRRNERG
Ga0116216_109142572	3300009698	Peatlands Soil	VRPWKRQLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRPSGPVSVDTRQGRVLDVLQPYIDDLIRRKERGARRAA
Ga0116217_100843912	3300009700	Peatlands Soil	VRPRKRRLSDHERSVLLSELLLRHPELVTETEEITSTLLVVENDQELAYEITARLRALRPSGPVSVDAGRARALDVLQPYIDDLTWRKQ
Ga0126373_126263472	3300010048	Tropical Forest Soil	VGSRKWRLSDDEQAVLLSELLLRHPELAAEAEEITSALLVVDDQELVDEVTARLRALRPGGPVSVDAGRARILEVLQPYIDDLTWRKERGARRAAAGI
Ga0134065_100782291	3300010326	Grasslands Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVETEQEFGDEITAKLRALRASGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARLAAADIAIAVLSGLYGCREDTGEDGLLVRMGLPGAADDL
Ga0134111_101950631	3300010329	Grasslands Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQEFGDEITAKLRALCANGPVSVDTGRGRVLEVLQPYIDDLTRRKECGARRAAADIVIAVLSGM
Ga0134128_117812111	3300010373	Terrestrial Soil	VRSWKRRLSADERSVLLAELLRRHPELGREAEEISCALLVVDDQELTSEITARLRALSLRGPVSVEAGRGRVLEVLQPYIDDLTRRKERGALRAAA
Ga0136449_1002835341	3300010379	Peatlands Soil	VHPWRRRLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENEQELGDEITAKLRALCANGPVPVDAGRGRVLEVLQPYIDDLTRRKERGAG
Ga0136449_1020364801	3300010379	Peatlands Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQELGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARRAAADI
Ga0126383_135524211	3300010398	Tropical Forest Soil	VLLSELLLRHPELVAEAEEITSTLLVVENDQELADEITGRLRALRPSGPVSVDAGRGRVLDVLQPYIDDLTWRKERGARRAAADIAIAVLSGLYECREDTEEDMLLVRMGL
Ga0126361_109717003	3300010876	Boreal Forest Soil	VRPWKRRLSDDERSVLLSELLLRHPELAVDAEEITSTLLVVENEQELADEITAKLRALRPSGPVSIDTARAQVLDVLQPYIDDLTWRKERGARRAATDITTA
Ga0126350_112785503	3300010880	Boreal Forest Soil	LSDDERSVLLSELLLRHPELVAEAEEITSALLVVENDQELADEITATLRALRPNGPASVDMGRGRVLDVLQPYIDDLTRRKERGARRAAAGIAI
Ga0137383_110400841	3300012199	Vadose Zone Soil	DERSVLLAELLLRHPELAAEAEEITSTLLVVGDEQELADEITARLRALRASGPVSLDAGRGRVLEVLQPYFDDLTRRKERGLTVEDYEIA*
Ga0137365_104049942	3300012201	Vadose Zone Soil	VGSWKRRLSDDERSVLLAELLLRHPELAAEAEEITSALLAVDDQELIDEITTRLRTLRLRGPVSVDAGRGRVLEVLQPYIDDLTWRKE
Ga0137381_110568672	3300012207	Vadose Zone Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQESGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARRAAADIAIAVLSGLY
Ga0137381_116314561	3300012207	Vadose Zone Soil	LLLRHPELVAEAEEITSTLLIVENDQDLADEITARLRALRPSGPLSVDAGRTRILDVLQPYINDLTWRKERGGRRAAADIAAAVLLGLYECRDDTDED
Ga0137372_103621151	3300012350	Vadose Zone Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQEFGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARRAAADIAI
Ga0137372_105093192	3300012350	Vadose Zone Soil	VRLWKRRLSDDERSVLLSELLLRHPELVAEAEEIASTLLVVENDQELADEITARLRALRPSGPVSVDAGQARALDILQPYIDDLTWRKERG
Ga0137385_100028991	3300012359	Vadose Zone Soil	VGSWKRRLSDDERSVLLAELLLRHPELAAEAEEITSALLAVDDQELIDEITTRLRTLRLRGPVSVDAGRGRVLEVLQPYIDDLTWRKERGAQRAAADTAAAVMLGLYECREDTDEDMLLVRMGLPGAADDLA
Ga0137385_100175567	3300012359	Vadose Zone Soil	VRPWKRRLSDAERSVLLSELLLRHPELVAEAEEITSALLVVEDDQELADEITARLRALRASGPVSVDTGRGRVLDVLQPYIDDLTGRKERGARRAAADIAIAVLLGLYECRQDTDEDLLLVRMGLPGAADD
Ga0137385_114043451	3300012359	Vadose Zone Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQEFGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARRAAADIAIAVLSGL
Ga0137361_106295482	3300012362	Vadose Zone Soil	VRPWKRRLSDDECSVLLAELLLRHPELVAEAEEITSTLLVVENEQEFGDQITAKLRALRANGPVSVDTGRGRVLDVLRPYIDDLTRRKERGARRAAADIAIAVLSGLYGCRED
Ga0137390_114921382	3300012363	Vadose Zone Soil	VRPWKRRLSDDERSVLVSELLLRHPELVAEAEEITSTLLVVEDDQELAEEITARLRALRASGPVSVDTGRGRVLDVLQPYIDDPAKR
Ga0137413_113127332	3300012924	Vadose Zone Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEPELGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARRAAAD
Ga0126375_114311071	3300012948	Tropical Forest Soil	VRPWKRRLSDDECAVLLAELLLRHPELAAEAEEITSTLLVVENQQELDEEITAKLRALRANGPVSVDAERGRVLNVLQPYIDDLTLRKQRGARRAAADIAIAVL
Ga0157372_101048774	3300013307	Corn Rhizosphere	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDFTRRK
Ga0157376_100606243	3300014969	Miscanthus Rhizosphere	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAVLLGLYQCRDDAGEDMLLVRMG
Ga0137412_108587021	3300015242	Vadose Zone Soil	VRPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVEDDQELADEITARLRALRPSGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAADIAIAVLLGLYECREDTDEDMLLVRMGL
Ga0132255_1012939901	3300015374	Arabidopsis Rhizosphere	VSSWKRRLSDDERSVLLSELLFRHPELAAEAEQITCTLLLVENDQELADEITATLRALRSSGPVSVDAGQGRALGVLQPYIDDLIRRAEHGARR
Ga0132255_1025053552	3300015374	Arabidopsis Rhizosphere	LSDDERSVLLSELLLRHPELVAEAEKIISALLVAENDQELADEITARLRALRPNGPVSVDTGRRRVLDILQPYIDDLTRRKERGAWQAAADIAIAILPGLYECREDTDEDMLLVRMGLPG
Ga0182037_111842781	3300016404	Soil	VRPRKRRLSDDERSVLLSELLLRHPEPVAEAEEITSTLLVVENDQKLADEITARLRALSPSGPVSVDAGQARVLDALQPYIDDLTWRKERGARRAAADIAI
Ga0187812_10604491	3300017821	Freshwater Sediment	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSKLLVVEDDQELAGEITAKLRALRASGPVSVDTGRGRVLDVLQPYIDDLIRRKERGARRAAADIAIAVLL
Ga0187807_10993781	3300017926	Freshwater Sediment	MHPWKRRLSHDERSVLLSELLLRHPELVAEAEEITSTLLVVENDQELADEITARLRALRPSGPVSVDSGRRQVLDLLQPYIDDLTWRKERGARRAAADIAIAVL
Ga0187819_105359761	3300017943	Freshwater Sediment	VRPWKRRLSDDECAVLLAELLLRHPELAAEAEEITSTLLVVENEQELGDEITAKLRALRANGPVPVDAGRGRVLGVLQPYIADLTRRKERGARRAAADIAIA
Ga0187776_102351211	3300017966	Tropical Peatland	VRPWKRRLSDGERSVLLSELLLRHPELVAEAEEITSTLLIVEDDQKLADEITARLRALRASGPVSVDAGQARVLDALQPYIDDLTWRKERG
Ga0187781_100760131	3300017972	Tropical Peatland	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELAGEITARLRALRPSGPVSVDAGRGRVLEVLQPYIDDLTWRKERGARRAAADVAIAVLLGLYECRE
Ga0187780_102185581	3300017973	Tropical Peatland	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITATLLVVENDQKLADEITARLRALRPSGPVSIDAGQARVLDALQPYIDDLTWRKERGARRAAAD
Ga0187780_104704892	3300017973	Tropical Peatland	MRPWERRLSDDERSVLLSELLLRHPELAAEAEEVTSSLLIVENDQELADEITARLRALRASGPVSLNAGRGRVLDLLQPYIDDLTRRQERGARRAA
Ga0187890_107059851	3300018044	Peatland	VPGPQHPAATRSAKRHDGAVCPWKRRLSDDERSVLLSELLLRHPELVAEAEQITSALLVVENDQELADEITARLRALRPDGPVSVDTGQGRVLDVLQSYIDDLTRRKERGARRAAAGIAIAVLLGLYECREDIDED
Ga0066662_125044691	3300018468	Grasslands Soil	MVRVRPWKRRLSDDECSVLLAALLLRHPELAAEAEEITSTLLVVEDDQELADEITAKLRALRASGPMSVDTGRGRVLDVLQPYIEDLTRRKERGARRAAADIAT
Ga0210407_102409672	3300020579	Soil	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAEQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAVLLGLYQCRDDTDEDMLLVRMG
Ga0210399_109997431	3300020581	Soil	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAEQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAVLLGLYQCRDD
Ga0210405_108755931	3300021171	Soil	VPGPQHPAATRSAKRHDSAVCPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSALLVVENDQELADEITARLRALRPNGPVSVDTGRGRVLDVLQ
Ga0210387_103176281	3300021405	Soil	VPGPQHPAATRSAKRHDSAVCPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSALLVVENDQELADEITARLRALRPNGPVSVDTGRGRVLDVLQPYIDDLTR
Ga0210386_101569484	3300021406	Soil	VPGPQHPAATRSAKRHDSAVCPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSALLVVENDQELADEITARLRALRPNGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAADIAI
Ga0213878_102322731	3300021444	Bulk Soil	MRPWKRQLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSIYAGQARVLHALQPYIDDLTWRKERGARRAAADIAIAILLGLH
Ga0210410_116459251	3300021479	Soil	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAEQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAVLL
Ga0210409_102065061	3300021559	Soil	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAEQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAVLLGLYQCRDDTDEDMLLVR
Ga0208076_10710651	3300025464	Arctic Peat Soil	VRPWKRRLSDDERSVLLSELLLRHPELVTEAEEITSALLVVENDQELADEITARLRALRPNGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAADIAIAVLLGLYECRED
Ga0207693_101508481	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VNAVLGHDGAVGSWRRRLSDDEQSVLLSELLLRHPELAAEAEEITSALLAVDDRELTGEITTRLRALRLRGPVSVDAGRGRVLEVLQPYIDDLTWRKERGARRA
Ga0207646_111989721	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAAD
Ga0207661_103631781	3300025944	Corn Rhizosphere	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDFTRRKERGARRAAADIAIAVLLGLYQCRDDAD
Ga0207765_1138241	3300026819	Tropical Forest Soil	VSPWKRQLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSIDAGQARVLDALQPYIDDLTWRKERGARRAAADIA
Ga0208604_10047151	3300027090	Forest Soil	VPGPQYPAATRSAKRHDSAVCPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSALLVVENDQELADEITARLRALRPNGPVSVDTGRGRVLD
Ga0208042_10744271	3300027568	Peatlands Soil	VPGPQHPAATRSAKRHDGAVRPWKRRLSDAERSVLLSELLLRHPELVAEAEEITSALLVVEDDQELADEITARLRALRASGPVSVDTGRGRVLDVLQPYIDDLTRRKERGARRAAAGIATAVLFGRYECREDTDQDMLLVRMGLPGAA
Ga0209333_11968961	3300027676	Forest Soil	VGSRKRRLSDDERSVVLSELLLRHPELAAEAEEVTSALLVVDDRELIDEITIRLRTLGLRGPVSVDAGRRRVLEVLEPYIDDLTWRKERGARRAAADIAAAVMLGLYECR
Ga0207862_10067951	3300027703	Tropical Forest Soil	AASRSAWRHDGVVRPWERRLSDNERSVLLSELLVRHPELAAEAEEITSTLLVVENHQELADEITARLRALCPSGPVSVDAGRAQVLARRCLRPSRCARLTWLFP
Ga0209177_102158922	3300027775	Agricultural Soil	MRPWKRRLSDDERSVLLSELLLRHPELIAEAREITSTLLVVDDDQELADEITARLRALRPSDPVSVDAGQRRVLGVLQPYIDDFTRRKERGARRAACSGRILGRWFDLGALTPT
Ga0209656_100868654	3300027812	Bog Forest Soil	VVSPWKRQLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSVDAGQARVLDALQPYIDDLTWRKERGARRAAADIVSAVLLELHGCRDDTDQDMLLVR
Ga0307282_105712211	3300028784	Soil	VRPWKRQLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQELGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRK
Ga0310686_1194623161	3300031708	Soil	VLSELLLRHPELAAEAEEITSALLVVNDRELIGEIMARLRALRLRGPVSVDAGRGRVLEVLQPYIDDLTWRKERGARRAAA
Ga0318566_100863442	3300031779	Soil	LPCEKAASRSAWRHDGVVRPRKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEKDLGAEITAKLRVLRPSGPVSVDGWRARVLEVLQPYIDDLTW
Ga0318547_108187022	3300031781	Soil	LPCEKAASRSAWRHDGVVRPRKRRLSDDERSVLLSELLVRHPELVAEAEEITSTLLVVEKDLGAEITAKLRVLRPSGPVSVDGWRARVLEVLQPYIDDLTWRKERGARRAAADIAIAVLLALHECRGY
Ga0318568_108824871	3300031819	Soil	VRPWRRRLSDGERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASGPVSVDAGRARVLDVLRPYIDDLTRRKERGARRAAADIATAVLLGLYECREDTD
Ga0318495_100235623	3300031860	Soil	LPCEKAASRSAWRHDGVVRPRKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEKDLGAEITAKLRALRPSGPVSVDGWRARVLEVLQPYIDDLTW
Ga0306925_110354013	3300031890	Soil	PETSLLSAWRHDGVVRPWKRRLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENDQELADEITARLRALRPSGPVSVDAGRGRVLDVLQPYIDDLTWRKERGARRAAADIAIAILLGLRMPR
Ga0306923_115636751	3300031910	Soil	VRPRKRRLSDDERSVLLSELLLRHPEPVAEAEEITSTLLVVENDQELADEITARLRALRPSGPVSIDAGQARVLHALQPYIDDLAWRKERGARRAAADIAIAILLGL
Ga0310913_111347781	3300031945	Soil	VRPWKRQLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSVDAGQARVLDALQPYIDDLTWRKERGARRAAADIAIAILLGLHGCRADTDQ
Ga0318507_101693462	3300032025	Soil	VRPWKRQLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSVDAGQARVLDALQPYIDDLTWRKERGARRAAADIAIAILLGLHGCRDDTDQDMLLVRMGLPGAA
Ga0318575_102689662	3300032055	Soil	VRPWRRRLSDGERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASGPVSVDAGRARVLDVLRPYIDDLTRRKERGARRAAADIATAV
Ga0318505_101573911	3300032060	Soil	LPCEKAASRSAWRHDGVVRPRKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEKDLGAEITAKLRALRPSGPVSVDGWRARVLEVLQPYIDDLTWRKERGARRAAAD
Ga0318505_105332421	3300032060	Soil	VRPWRRRLSDGERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASGPVSVDAGRARVLDVLRPYIDDLTRRKERGARRAAADIATAVLLGLYEC
Ga0318504_103844171	3300032063	Soil	LLLRHPELVAEAEEITSTLLVVEDDQELADEITARLRALRASGPVSVDAGRARVLDVLRPYIDDLTRRKERGARRAAADIATAVLLGLYECREDTDEDMLLVRMGLPGAADDLA
Ga0306924_118093392	3300032076	Soil	VRPWKRQLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVENDQKLADEITARLRALRPSGPVSVDAGQARVLDALQPYIDDLTWRKERGARRAAADIAIAILLGLHGCRDDTD
Ga0311301_111019612	3300032160	Peatlands Soil	VRPWKRQLSDDERSVLLSELLVRHPDLAAGAEEITSTLLIVEKDLADEIIAGLRALRPSGPVSVDAGRARVLEVLQPYIDDLTWRKERGARRAAADIAIAVLLGLYECRDDTDEDMLLVRMGLP
Ga0335085_115813752	3300032770	Soil	VGSRKRRLSDDERSVLPSELLLRHPELAAEAEEITSALLVVDDRKLTGEITSRLRALRLRGPVSVDAGQALVLEVLQPYIDDLTWRKERGARRAAADIAVAVMLGLYECRE
Ga0335079_100981261	3300032783	Soil	VRPWKRRLSDDERSVLLSELLLRHPELAAEAEEITATLLVVEDDQGLADEITARLRALRASGPVSVDTGRAQALDLLQPYIDDLTRRKERGARRAAADVATAVLLGLYE
Ga0335079_110144302	3300032783	Soil	VRPWKRQLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVEDDQELADEITTKLRALRASGPVSVDTGRGRVLDVLQPYINDLTRRKERGARRAAADVATAVLLGLYE
Ga0335080_119042611	3300032828	Soil	VHPWKRRLSDDECSVLLAELLLRHPELAAEAEEITSTLLVVENEQEFGDEITAKLRALRANGPVSVDAGRGRVLDVLQPYIDDLTRRKERGARRAAADIAIAVLSGLYGCREDT
Ga0335074_113308361	3300032895	Soil	VGSWKRRLSDDERSVLLAELLLRHPELAAEAEEITSALLVVDDRELTGEITARLRTLRLRGPVSVDAMRERVLEVLQPYIKDLTWRKERGARRAAADIAAVMLGLYECREDTGEDMLL
Ga0335072_112373992	3300032898	Soil	VQPWKRRLSDAERSVLLSELLLRHPELAAEAAEITSTLLVVENDQELTDEIMTRLRALCPGTPVSVDAGQGLVLDLLQPYIDDLTWRKERGAGR
Ga0335083_113600431	3300032954	Soil	VGPESGEDEPAGRCPDLQGRRPPRSTRRHDGVVRLWKRRLSDGERSVLLSELLLRHPELAAEAEEITSTLLVVDNDQELANEITAKLRALRPTGPVSVDAGRARVLEVVQPYIDDLTWRKERGARWAAADIAI
Ga0335073_104456871	3300033134	Soil	VRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQELADEITAKLRALRASGLVLVDTGRGRVLDVLQPYIDDLTWRKERGARRAAADIAIAVLLGLYECRGDTD
Ga0335073_111860151	3300033134	Soil	MRPWERRLSDEERSVLLSELLLRHPELAAEAEEITSTLLVAERDQDLAEEITARLRSLRPGGPVSVDAGRARILEVLQPYIDDLTWRKERG
Ga0335077_106970502	3300033158	Soil	VVRPWKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEDDQKLADEITARLRALRPTGPVSVDAGQARALDALQPYIDDLTWRKERGARRAAADIAIAILLGLHGCRDDTDQDMLLVRMG
Ga0310914_107794542	3300033289	Soil	VRPRKRRLSDDERSVLLSELLLRHPELVAEAEEITSTLLVVEKDLGAEITAKLRALRPSGPVSVDGWRARVLEVLQPYIDDLTW
Ga0314862_0065315_517_804	3300033803	Peatland	MRPWKRRLSDDERSVLLSELLLRHPELAAEAEEITSTLLVVENDQELADEITARLRALRPSGPVSVDAGRGRVLDVLQPYIDDLIWRKERGARRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092617

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences