Metagenome / Metatranscriptome Family F092609

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F092609
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	101 residues
Representative Sequence	KYVRSSGKYSWELKTLVPAVATVPGAPFASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Number of Associated Samples	93
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	97.20 %
% of genes from short scaffolds (< 2000 bps)	95.33 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.495 % of family members)
Environment Ontology (ENVO)	Unclassified (28.972 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.402 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.56% Coil/Unstructured: 67.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF12802	MarR_2	8.41
PF01047	MarR	4.67
PF01243	Putative_PNPOx	2.80
PF00005	ABC_tran	2.80
PF00903	Glyoxalase	1.87
PF01734	Patatin	0.93
PF00583	Acetyltransf_1	0.93
PF12680	SnoaL_2	0.93
PF00440	TetR_N	0.93
PF13011	LZ_Tnp_IS481	0.93
PF14336	DUF4392	0.93
PF00892	EamA	0.93
PF04229	GrpB	0.93
PF13466	STAS_2	0.93
PF08327	AHSA1	0.93
PF00749	tRNA-synt_1c	0.93
PF03965	Penicillinase_R	0.93
PF12681	Glyoxalase_2	0.93
PF13601	HTH_34	0.93
PF01725	Ham1p_like	0.93
PF13185	GAF_2	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.93
COG0127	Inosine/xanthosine triphosphate pyrophosphatase, all-alpha NTP-PPase family	Nucleotide transport and metabolism [F]	0.93
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.93
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.93
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.93
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.93
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.93
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.13 %
Unclassified	root	N/A	1.87 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.46 %
Unclassified	root	N/A	1.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.46 %
Unclassified	root	N/A	1.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	85.05 %
Unclassified	root	N/A	1.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	85.05 %
Unclassified	root	N/A	1.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	85.05 %
Unclassified	root	N/A	1.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001413\|JGI20180J14839_1012390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300001417\|JGI20196J14858_1005764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300002245\|JGIcombinedJ26739_100971743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300004479\|Ga0062595_101306232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300005171\|Ga0066677_10589959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300005174\|Ga0066680_10939745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300005176\|Ga0066679_10164301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1398	Open in IMG/M
3300005179\|Ga0066684_10179422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1360	Open in IMG/M
3300005180\|Ga0066685_10461883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	881	Open in IMG/M
3300005184\|Ga0066671_10295670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300005332\|Ga0066388_103444883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300005434\|Ga0070709_10156419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1581	Open in IMG/M
3300005435\|Ga0070714_102089443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005439\|Ga0070711_101232436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300005447\|Ga0066689_10672807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300005518\|Ga0070699_101581722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300005540\|Ga0066697_10586340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300005561\|Ga0066699_10540010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300005561\|Ga0066699_10543794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	832	Open in IMG/M
3300005561\|Ga0066699_10853817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300005569\|Ga0066705_10107187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1669	Open in IMG/M
3300005575\|Ga0066702_10977738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300005764\|Ga0066903_100693716	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300006031\|Ga0066651_10321847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300006046\|Ga0066652_100961189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300006173\|Ga0070716_100283033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1145	Open in IMG/M
3300006795\|Ga0075520_1215632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300006797\|Ga0066659_11563640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300006797\|Ga0066659_11671532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300006797\|Ga0066659_11674708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300006800\|Ga0066660_10487198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1035	Open in IMG/M
3300006800\|Ga0066660_10970896	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006854\|Ga0075425_103161663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300006893\|Ga0073928_10826744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300006914\|Ga0075436_101541815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300009012\|Ga0066710_100304249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2337	Open in IMG/M
3300009012\|Ga0066710_101354605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1104	Open in IMG/M
3300009012\|Ga0066710_104031021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300009137\|Ga0066709_104508824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300009551\|Ga0105238_10633696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1078	Open in IMG/M
3300010303\|Ga0134082_10426790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300010361\|Ga0126378_11415813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300010371\|Ga0134125_11329070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300010375\|Ga0105239_12887177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300010403\|Ga0134123_10794320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300012199\|Ga0137383_10300720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1175	Open in IMG/M
3300012200\|Ga0137382_10438204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300012285\|Ga0137370_10329102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300012351\|Ga0137386_10518968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300012372\|Ga0134037_1190057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300012927\|Ga0137416_10651788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300012957\|Ga0164303_11327157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300012977\|Ga0134087_10619092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300012988\|Ga0164306_10583209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300013297\|Ga0157378_10212355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1836	Open in IMG/M
3300014166\|Ga0134079_10378868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300016341\|Ga0182035_11131195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300016422\|Ga0182039_10907990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300018433\|Ga0066667_10402975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1106	Open in IMG/M
3300018433\|Ga0066667_10642802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300018468\|Ga0066662_10808871	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300019887\|Ga0193729_1036705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2044	Open in IMG/M
3300020022\|Ga0193733_1101558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300020061\|Ga0193716_1028234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2762	Open in IMG/M
3300021180\|Ga0210396_10063418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3370	Open in IMG/M
3300024288\|Ga0179589_10128744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300025504\|Ga0208356_1034446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300025878\|Ga0209584_10210733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300025906\|Ga0207699_11243127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300025906\|Ga0207699_11424646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300025924\|Ga0207694_10408998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300025939\|Ga0207665_10365213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300025939\|Ga0207665_10644015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300026530\|Ga0209807_1119932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1080	Open in IMG/M
3300026557\|Ga0179587_11003557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300027895\|Ga0209624_10423969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300028047\|Ga0209526_10051810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2889	Open in IMG/M
3300028047\|Ga0209526_10144557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1667	Open in IMG/M
3300028536\|Ga0137415_11227263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300028828\|Ga0307312_10200019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1283	Open in IMG/M
3300031572\|Ga0318515_10223469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1010	Open in IMG/M
3300031573\|Ga0310915_10211361	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300031680\|Ga0318574_10652871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300031680\|Ga0318574_10774502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300031681\|Ga0318572_10614249	Not Available	648	Open in IMG/M
3300031720\|Ga0307469_11295929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300031765\|Ga0318554_10364623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300031770\|Ga0318521_11044361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300031782\|Ga0318552_10435595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300031796\|Ga0318576_10128879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1172	Open in IMG/M
3300031798\|Ga0318523_10284056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300031798\|Ga0318523_10663098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300031799\|Ga0318565_10184775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1014	Open in IMG/M
3300031893\|Ga0318536_10242731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300031897\|Ga0318520_10953755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300031942\|Ga0310916_10757365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300031942\|Ga0310916_11290777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300031946\|Ga0310910_10768336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300031954\|Ga0306926_10553575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1409	Open in IMG/M
3300031962\|Ga0307479_11951545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300031981\|Ga0318531_10535849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300032001\|Ga0306922_11644011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300032010\|Ga0318569_10076908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1483	Open in IMG/M
3300032043\|Ga0318556_10577219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300032066\|Ga0318514_10447496	Not Available	686	Open in IMG/M
3300032067\|Ga0318524_10786684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300032180\|Ga0307471_103502450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.39%
Host-Associated	Host-Associated	5.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.46%
Plants	Host-Associated → Plants	5.61%
Aquatic	Environmental → Aquatic	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.50%
Loam	Environmental → Terrestrial → Soil → Loam	14.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.61%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.67%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.93%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.69%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.61%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.93%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001413	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012	Environmental	Open in IMG/M
3300001417	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20180J14839_10123903	3300001413	Arctic Peat Soil	PVATVPGAPLASVSKIHLKAGAAFRSHGKVVPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGISPKTVTKVIRVPCPRR*
JGI20196J14858_10057641	3300001417	Arctic Peat Soil	YTQGSSPVSLEVVSTGKYVRSSGKYSWELEALVPPVTTVPGAPLASVSKIHLKAGAAFRAHGKVVPYGTVPKKGECPKGGFFGKTEVTFGGMFGREREFGISPKTVTNVIRVPCPRR*
JGIcombinedJ26739_1009717432	3300002245	Forest Soil	SGKYSWELETLVPAVATVPGAPFASVSKIHIKAGAAFRAHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKTVTKVIRVPCPRR*
Ga0062595_1013062321	3300004479	Soil	QAFFGPGGSLLFYTQGSTPVSLEVVSTGRYVRSSGKYSWELKTLVPAVATVPGAPLASVSRIHIKAGAAYRSHGKVVPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR*
Ga0066677_105899591	3300005171	Soil	FYTQGATPVSLEVVSAGKYVRSSGKYSWELKTLVPAVPTVPGAPLASVSKIHIKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKMVTKVIRVPCPRR*
Ga0066680_109397452	3300005174	Soil	VRSSGKYSWELKTLVPPVASVPGAPLASARNIHIKGGAAYRKHGKVVPYGTVPKKGECPHGGFFGKVEVTFGGMYGGEREFGIPPKTVTKVIRVPCPKH*
Ga0066679_101643013	3300005176	Soil	GAPFASVSKIHIQAGAAIRKRGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTNVIRVPCPRR*
Ga0066684_101794221	3300005179	Soil	FAPGGGLLFYTQGTSPVSLEVVSAGRYVRSSGEYSWELETLVPAVATVPGAPFASVSRIHLKAGAAYRSHGRVIPYGTVPKKGECPKGGFFGKTEITFGGMFGGEREFGIPPKTVTKVIRVPCPRR*
Ga0066685_104618831	3300005180	Soil	QTLVPAVATVPGAPFASVSKVHIKAGAAMRSHGKVIPYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVSKEVRVPCPRR*
Ga0066671_102956701	3300005184	Soil	LVPPVASVPGAPLASAKRIHIKVGAAIRKHGKVVPYGTVPKKGECPKGGFFGKVELVFGGMEGGEREFGIPAKTVTDVIRVPCPKR*
Ga0066388_1034448831	3300005332	Tropical Forest Soil	TLVPAVATVPGAPLASVSRIRLKAGAAFRKHGKVIPYGTVPKRGECPKGGFFGKTEVTFGGMFGGQREFGIPAKTVTNVIRVPCPRR*
Ga0070709_101564193	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TGRFVRSSGKYSWELKTLVPPVATVPGAPLASVSRIHIKSGAAYRSHGKVIPYGTVPQKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR*
Ga0070714_1020894431	3300005435	Agricultural Soil	PVTVEVVSTGKWVRSSGKYSWELETLVPAVATVPGAPFASVSKVHIKAGAAMRSHGKVIPYGTVPRKGECPKGGFYGKLEVTFGGMFGGEREFGIAPKTVTKIVRAPCPRR*
Ga0070711_1012324362	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LFYTQGSTPVSLEVVSTGRYVRSSGKYSWELKTLVPAVATVPGAPLASVSRIHIKAGAAYRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPEKTVTNVIRVPCPRR*
Ga0066689_106728071	3300005447	Soil	EVVSSGRYVRSSGNYSWELQTLVPAVATVPGAPLASVSRIHIKAGAAYRAHGKVIPYGTVPRKGECPKGGFFGKTEVTFGGMFGGDREFGIPAKTVTDVIRVPCPRR*
Ga0070699_1015817221	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KWVRSSGKYSWELETLVPAVATVPGAPFASVSKVHIKAGAAIRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPPKTVTTVIRVPCPRR*
Ga0066697_105863402	3300005540	Soil	RSSGNYSWELKTLVPAVATVPGAPFASVSKIHIKAGAAFRSHGKVISYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKTVTKVIRVPCPRR*
Ga0066699_105400101	3300005561	Soil	VVSTGSFVRSSGNYSWELKTLVPAVATVPGAPFASVSKIHIKAGAAFRSHGKVISYGTVPKKGECPKGGFFGKTEVTFGGMFGGDRDFGIPPKTVTKVIRVPCPRR*
Ga0066699_105437941	3300005561	Soil	GAPLASVSKIHIKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEITFGGMFGGEREFGIPPKTVTKVIRVPCPRR*
Ga0066699_108538171	3300005561	Soil	VRSSGKYSWELKTLVPPVASVPGAPLASARKIHIKVGAAYRKNGKVVPYGTVPKKGECPHGGFFGKTEVTFGGMYGGEREFGIPPKTVTKVIRVPCPKR*
Ga0066705_101071871	3300005569	Soil	TGSFVRSSGNYSWELKTLVPAVATVPGAPFASVSKIHIKAGAAFRSHGKVISYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKTVTKVIRVPCPRR*
Ga0066702_109777381	3300005575	Soil	GKYSWELKTLVPAVPTVPGAPLASVSKIHIKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEITFGGMFGGEREFGIPPKTVTKVIRVPCPRR*
Ga0066903_1006937164	3300005764	Tropical Forest Soil	GKYVRSSGKYSWELKTLVPAVATVPGAPLASVSRIRIKAGAAFRKHGKVIPYGTVPRKGECPRGGFFGRTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR*
Ga0066651_103218472	3300006031	Soil	ISTGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASRIHLKAGAAFRKHGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIPAKTVTKEVRTPCPRR*
Ga0066652_1009611891	3300006046	Soil	KTLVPPVPTVPGAPLASASKIHLKAGAAFRKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0070716_1002830331	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PPVPTVPGAPLASASRIHIKAGAAYKKKGKVISYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0075520_12156321	3300006795	Arctic Peat Soil	VPGAPLASVSKIHLKAGAAFRSHGKVVPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGISPKTVTKVIRVPCPRR*
Ga0066659_115636401	3300006797	Soil	SGKYSWELQTLVPAVATVPGEPFASVSKVHIKAGAAMRSHGKVIPYGTVPKKGECPKGGFFGKLEVTFGGMFGGEREFGIPPKTVTKIVRAPCPRR*
Ga0066659_116715322	3300006797	Soil	SARKIHIKVGAAIRRHGKVIPYGTVPKKGECPHGGFFGKVELIFGGMYGGEREFGIAPKPVSQVIRVPCPKH*
Ga0066659_116747081	3300006797	Soil	VPGAPLASARMIHIKVGAAYRSHGKVVPYGTVPKKGECPHGGFFGKTEVTFGGMYGGEREFGIPPKTVTKVIRVPCPKR*
Ga0066660_104871982	3300006800	Soil	PGAPLASARKIHIKVGAAIRRHGKVIPYGTVPKKGECPHGGFFGKVELIFGGMYGGEREFGIAPKPVSKVIRVPCPKH*
Ga0066660_109708961	3300006800	Soil	RIHIKVGAAIRKHGKVVPYGTVPKKGECPKGGFFGKVELVFGGMEGGEREFGIPAKTVTDVIRVPCPKR*
Ga0075425_1031616631	3300006854	Populus Rhizosphere	LKTLVPPVPTVPGAPLASVSKIRLKAGAAFRKNGKVIPYGTVPKRGECPKGGFFGKTEVTFGGMFGGEREFGIPPKTVTEVIRVPCPRR*
Ga0073928_108267441	3300006893	Iron-Sulfur Acid Spring	AFFAPGAGVLFYTVGRSPVSLEVVSAGKYVRSTGKYSWELETLVPAVASVPGAPFASVSKLPITAGAAYRSHGKVIPYGTVPKKGECPRGGFFGKTEVTFGGMFGGTREFGIPPKTVTDVIRVPCPRH*
Ga0075436_1015418151	3300006914	Populus Rhizosphere	AFFAPGGGLLFYVQGSTPVSLEVLSTGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASRIHIKAGAAYKKNGKVISYGTVPKKGECPNGGFFGKLEITFGGSNQYGEFGIAPKTVSKEVRAPCPRR*
Ga0066710_1003042494	3300009012	Grasslands Soil	RSSGKYSWELETLVPAVATVPGAPLASVSKIHIKAGAALRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPAKTVTDVIRVPCPRR
Ga0066710_1013546051	3300009012	Grasslands Soil	FAPGGGLLFYTQGSTPVSLEVVSTGRYVRSSGKYSWELKTLVPAVPTVPGAPLATVSRIHIKAGAAIRRNGKVIPYGTVPKRGECPKSGFFGKTEITFGGNFGGEREFGIPAKTVTNVIRERCPRR
Ga0066710_1040310211	3300009012	Grasslands Soil	GKYAWELKTLVPPVATVPGAPLASARRIHIKAGAAYRKNGKVISYGTVPKKGQCPKGGFFGKTEVTFGGMYGGEREFGIPPKTVTKVIRVPCPRR
Ga0066709_1045088241	3300009137	Grasslands Soil	EVVSRGKWVRSSGKYSWELQTLVPAVATVPGAPFASVSRVHIKAGAAMRSHGEVIPYGTVPKKGECPKGGFFGKLEVTFGGMFGGEREFGIPPKTVTKIVRAPCPRR*
Ga0105238_106336962	3300009551	Corn Rhizosphere	IHLKAGAAIRSHGKVIPYGTVPKKGECPKGGFFGKTEITFGGMFGGDREFGIPPKTVTQVIRVPCPRR*
Ga0134082_104267901	3300010303	Grasslands Soil	VRSSGKYSWELKTLVPPVPTVPGAPLASASKIHLKAGAAFRKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0126378_114158131	3300010361	Tropical Forest Soil	TLVPAVATVPGAPLASVSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR*
Ga0134125_113290701	3300010371	Terrestrial Soil	YTQGSSPVSLEVVSTGRFVRSSGKYSWELKTLVPPVATVPGAPLASVSRIHIKSGAAYRSHGKLIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR*
Ga0105239_128871771	3300010375	Corn Rhizosphere	WELETLVPAVATVPGAPLASVSKIHLKAGAAIRSHGKVIPYGTVPKKGECPKGGFFGKTEITFGGMFGGDREFGIPPKTVTQVIRVPCPRR*
Ga0134123_107943202	3300010403	Terrestrial Soil	VPGAPLGSASKIHLKAGAAFKKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0137383_103007201	3300012199	Vadose Zone Soil	KGSSPVSLEIVSAGKYVRSSGKYSWELKTLVPPVASVPGAPLASARKIHIKVGAAYRKNGKVVPYGTVPKKGECPHGGFFGKTEVTFGGMYGGEREFGIPPKTVTKVIRVPCPKR*
Ga0137382_104382042	3300012200	Vadose Zone Soil	AFFAPGGGLLFYVQGSTPVSLEVLSTGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASKIHLKAGAAFRKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0137370_103291022	3300012285	Vadose Zone Soil	SIGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASKIHLKAGAAFRKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0137386_105189682	3300012351	Vadose Zone Soil	WELKTLVPAVATVPGAPFATVSKIHIKAGAAFRAHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKTVTQVIRVPCPRR*
Ga0134037_11900572	3300012372	Grasslands Soil	FTKGSSPVSLEIVSAGHYVRSSGKYSWELKTLVPPVASVPGAPLASARMIHIKVGAAYRSHGKVVPYGTVPKKGECPHGGFFGKTEVTFGGMYGGEREFGIPPKTVTKVIRVPCPKR*
Ga0137416_106517881	3300012927	Vadose Zone Soil	PVSIEVVSRGKWARSSGKYSWKLETLVPAVATVPGAPFASVSKIHIKAGAAIRKNGKVIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVVRVPCPRR*
Ga0164303_113271572	3300012957	Soil	STPVSLEVLSTGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASKIHLKAGAAFKKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGANQYGEFGIAPKTVTKEVRVPCPRR*
Ga0134087_106190922	3300012977	Grasslands Soil	VATVPGAPLASVSKIHIKAGAAFRSHGKVISYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKTVTKVIRVPCPRR*
Ga0164306_105832091	3300012988	Soil	EVVSTGRYVRSSGKYSWELKTLVPAVATVPGAPLASVSRIHIKAGAAYRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR*
Ga0157378_102123553	3300013297	Miscanthus Rhizosphere	VRSSGKYSWELKTLVPPVPTVPGAPLASASRIHIKAGAAYKKKGKVISYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0134079_103788682	3300014166	Grasslands Soil	FFAPGGGLLFYVQGSTPVSLEVLSIGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASKIHLKAGAAFRKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR*
Ga0182035_111311951	3300016341	Soil	TVPGAPFASVSKIHLKAGAAFRKHGKVIPYGTVPKKGECPRGGFFGRTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0182039_109079901	3300016422	Soil	VPGAPFASVSKIHLKAGAAYRSHGKVIPYGTVPKKGECPKGGFYGKVEITFGGMFGGTREFGIAPKTVTDVIRVPCPRR
Ga0066667_104029751	3300018433	Grasslands Soil	TLVPPVPTVPGAPLASASRIHIKAGAAYKKKGKVISYGTVPKKGECPKGGFFGTLEITFGGSNQYGEFGIAPKTVSKEVRVPCPRR
Ga0066667_106428023	3300018433	Grasslands Soil	VPGAPLASVSKIHIKAGAAFRSHGKVISYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKTVTKVIRVPCPRR
Ga0066662_108088713	3300018468	Grasslands Soil	ASVSRIHIKAGAAIRSHGKVIPYGTVPKKGECPQGGFFGKTEVTFGGMFGGDRECGIPAKTVTDVIRVPCPRR
Ga0193729_10367051	3300019887	Soil	STGKYVRSSGKYSWELQTLVPAVATVPGAPLASVSKIHLKAGAAFRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPPKTVTKVIRVPCPRR
Ga0193733_11015582	3300020022	Soil	TPVSLEVLSIGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASKIHLKAGAAFRKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR
Ga0193716_10282342	3300020061	Soil	VRSSGKYSWELETLVPPVATVPGAPLASVSKIHLKAGAAYKSHGKVVPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR
Ga0210396_100634186	3300021180	Soil	ETLVPAVATVPGAPLASVSKIHLKAGAAYRSHGKVVPYGTVPKKGECPKGGFFGKVEVTFGGTFGGEREFGIPAKTVTSVIRVPCPRS
Ga0179589_101287442	3300024288	Vadose Zone Soil	VSPVSLEVVSAGKYVRSSGKYSWELETLVPPVATVPGAPLASVSKIHLKAGAAIRSHGKVISYGTVPKKGECPKGGFFGKVEVTFGGSFGGEREFGIPAKTVTQVIRVPCPRR
Ga0208356_10344461	3300025504	Arctic Peat Soil	VQGSSPVSLDVVSAGRFVRSSGEYSWELKTLVPAVATVPGAPLASVSKIYIKAGAAFRSHGKVVSYGTVPKKGECPKGGFYGKVEVTFGGTFGG
Ga0209584_102107331	3300025878	Arctic Peat Soil	FYTQGSSPVSLEVVSTGKYVRSSGKYSWELEALVPPVTTVPGAPLASVSKIHLKAGAAFRAHGKVVPYGTVPKKGECPKGGFFGKTEVTFGGMFGREREFGISPKTVTNVIRVPCPRR
Ga0207699_112431271	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LVPPVPTVPGAPLASVSKIRLKAGAAFRKHGKVIPYGTVPKRGECPKGGFFGKTEVTFGGMFGGEREFGIPPKTVTEVIRVPCPRR
Ga0207699_114246461	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LFYTQGSSPVSLEVVSTGRFVRSSGKYSWELKTLVPPVATVPGAPLASVSRIHIKAGAAYRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR
Ga0207694_104089982	3300025924	Corn Rhizosphere	PAVATVPGAPLASVSKIHLKAGAAIRSHGKVIPYGTVPKKGECPKGGFFGKTEITFGGMFGGDREFGIPPKTVTQVIRVPCPRR
Ga0207665_103652133	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	YSWELKTLVPPVPSLPGAPLASARNIHIKVGAAYRKNGKVVPYGTVPKKGECPHGGFFGRTEVTFGGSNSFGEFGIPAKTVTKVIRVPCPKR
Ga0207665_106440151	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LSTGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASRIHIKAGAAYKKKGKVISYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR
Ga0209807_11199323	3300026530	Soil	LEVVSTGSFVRSSGNYSWELKTLVPAVATVPGAPFASVSKIHIKAGAAFRSHGKVISYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGIPPKTVTKVIRVPCPRR
Ga0179587_110035571	3300026557	Vadose Zone Soil	FFGPGGSLIFYTQGSTPVSLEVVSTGRYVRSSGKYSWELKTLVPPVATVPGAPLASVRRIHLKAGAAYRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR
Ga0209624_104239692	3300027895	Forest Soil	KTLVPPVATVPGAPLASVSKIHLKAGAAYRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVIRVPCPRR
Ga0209526_100518101	3300028047	Forest Soil	GTSPVSIEVVSGGKWVRSSGKYSWELETLVPAVATVPGAPFASVSKIHIKAGAAIRSHGKVVPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPPKTVTTVIRVPCPRR
Ga0209526_101445573	3300028047	Forest Soil	GRYVRSSGKYSWELETLVPAVATVPGAPLASVSRIHIRAGAAFRTHGKTISYGTVPKKGECPKGGFFGKTEVTFGGMFGGDREFGISPKTVTEVIRVPCPRR
Ga0137415_112272631	3300028536	Vadose Zone Soil	FAPGGGLPFFPQGTSPVRIEVLSRGTWARSSGKCSWKLETLVPAVATVPGAPFASVSKIHIKAGAAIRKNGKVIPYGTVPKKGECPKGGFFGKTEVTFGGTFGGEREFGIPAKTVTNVVRVPCPRR
Ga0307312_102000193	3300028828	Soil	SLEVVSTGRYVRSSGKYSWELETLVPAVATVPGAPLASVSKIHLKAGAAFRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPPKTVTKVIRVPCPRR
Ga0318515_102234693	3300031572	Soil	YSWELKTLVPAVATVPGAPFASVSRIHIKAGAAFRKHGKVIPYGTVPKKGECPRGGFFGRTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0310915_102113611	3300031573	Soil	VATVPGAPLASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGRTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318574_106528712	3300031680	Soil	QGSSPVSIEVVSSGRYVRSSGKYSWELKTLVPAVATVPGAPFASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318574_107745021	3300031680	Soil	RSSGQYSWELETLVPAVATVPGAPFASVSKIHLKAGAAYRSHGKVIPYGTVPKKGECPKGGFYGKVEITFGGMFGGTREFGIAPKTVTDVIRVPCPRR
Ga0318572_106142491	3300031681	Soil	IHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0307469_112959291	3300031720	Hardwood Forest Soil	STPVSLEVLSTGKWVRSSGKYSWELKTLVPPVPTVPGAPLASASKIHLKAGAAFKKNGKVTSYGTVPKKGECPKGGFFGKLEITFGGSNQYGEFGIAPKTVTKEVRVPCPRR
Ga0318554_103646231	3300031765	Soil	YTQGTSPVALEVVSAGRYVRSSGQYSWELETLVPAVATVPGAPFASVSKIHLKAGAAYRSHGKVIPYGTVPKKGECPKGGFYGKVEITFGGMFGGTREFGIAPKTVTDVIRVPCPRR
Ga0318521_110443611	3300031770	Soil	IEVVSSGKYVRSSGKYSWELETLVPAVATVPGAPLASVSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR
Ga0318552_104355952	3300031782	Soil	SWELETLVPAVATVPGAPLASVSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR
Ga0318576_101288791	3300031796	Soil	APGGGLLFYTQGSSPVSIEVVSSGRYVRSSGKYSWELKTLVPAVATVPGAPFASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318523_102840562	3300031798	Soil	SGKYVRSSGKYSWELETLVPAVATVPGAPLASVSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR
Ga0318523_106630982	3300031798	Soil	AVATVPGAPFASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318565_101847751	3300031799	Soil	SVSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318536_102427312	3300031893	Soil	VSIEVVSSGKYVRSSGKYSWELKTLVPAVATVPGAPFASVSRIHIKAGAAFRKHGKVIPYGTVPKKGECPRGGFFGRTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318520_109537552	3300031897	Soil	FYTQGTSPVALEVVSAGRYVRSSGQYSWELETLVPAVATVPGAPFASVSKIHLKAGAAYRSHGKVIPYGTVPKKGECPKGGFYGKVEITFGGMFGGTREFGIAPKTVTDVIRVPCPRR
Ga0310916_107573652	3300031942	Soil	FFGPGGGLLFFAHGFSPVSIEVVSSGKYVRSSGKYSWELETLVPAVATVPGAPLASVSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR
Ga0310916_112907771	3300031942	Soil	LLFFAQGHSPVSLEVVSSGKYVRSSGKYSWELKTLVPAVATVPGAPLASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0310910_107683361	3300031946	Soil	SLQAFFAPGGGFLFYTHGSSPVSIEVVSAGKYVRSSGKYSWELKTLVPAVATVPGAPLASVSRIHIKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0306926_105535752	3300031954	Soil	VPAVATVPGAPFASVSRIRLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKIETTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0307479_119515451	3300031962	Hardwood Forest Soil	WELETLVPAVATVPGAPFASVSKIHVRAGAAIRSHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318531_105358491	3300031981	Soil	GGGLLFYTQGSSPVSIEVVSSGRYVRSSGKYSWELKTLVPAVATVPGAPFASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0306922_116440111	3300032001	Soil	PVSIEVVSSGRYVRSSGKYSWELKTLVPAVATVPGAPFASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318569_100769083	3300032010	Soil	EVVSAGRYVRSSGQYSWELETLVPAVATVPGAPFASVSKIHLKAGAAYRSHGKVIPYGTVPKKGECPKGGFYGKVEITFGGMFGGTREFGIAPKTVTDVIRVPCPRR
Ga0318556_105772192	3300032043	Soil	KYVRSSGKYSWELKTLVPAVATVPGAPFASVSRIHLKAGAAFRKHGKVIPYGTVPKKGECPKGGFFGKTEVTFGGMFGGEREFGIPAKTVTTVIRVPCPRR
Ga0318514_104474962	3300032066	Soil	VSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR
Ga0318524_107866841	3300032067	Soil	FGPGGGLLFFAHGSSPVSIEVVSSGKYVRSSGKYSWELETLVPAVATVPGAPLASVSRIRLKAGAAIRKHGKVIPYGTVPKRGECPRGGFFGKTEVTFGGMFGGEREFGIPAKTVTKVIRVPCPRR
Ga0307471_1035024501	3300032180	Hardwood Forest Soil	PGGGLLFFTRGSSPVSLEVVSSGRYVRSSGKYSWELETLVPPVASVPGAPLASARVIHIKVGAAIRKHGKVIPYGTVPKKGECPKGGFNGKVELVFGGTEGGEREFGIAAKPLIALIRVPCPKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F092609

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences