NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092589

Metagenome Family F092589

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092589
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 99 residues
Representative Sequence MDPADESASIQGQLLRRSERREVAIYLRDGKLWIADFVDGIGELIDPAAWFRFNCGTPWARRAHRRMLFESATPLSAELAARIERLHHPSADRGEASERPP
Number of Associated Samples 76
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 54.21 %
% of genes near scaffold ends (potentially truncated) 42.99 %
% of genes from short scaffolds (< 2000 bps) 78.50 %
Associated GOLD sequencing projects 66
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(12.149 % of family members)
Environment Ontology (ENVO) Unclassified
(47.664 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.009 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.16%    β-sheet: 23.26%    Coil/Unstructured: 56.59%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF00486Trans_reg_C 25.23
PF13401AAA_22 3.74
PF00463ICL 2.80
PF13181TPR_8 1.87
PF02604PhdYeFM_antitox 0.93
PF00931NB-ARC 0.93
PF01668SmpB 0.93
PF02834LigT_PEase 0.93
PF13292DXP_synthase_N 0.93
PF13229Beta_helix 0.93
PF00211Guanylate_cyc 0.93
PF13424TPR_12 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG2224Isocitrate lyaseEnergy production and conversion [C] 2.80
COG0691tmRNA-binding proteinPosttranslational modification, protein turnover, chaperones [O] 0.93
COG1514RNA 2',3'-cyclic phosphodiesterase (2'-5' RNA ligase)Translation, ribosomal structure and biogenesis [J] 0.93
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.93
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.93
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.93

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000953|JGI11615J12901_11695438All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium927Open in IMG/M
3300003319|soilL2_10184544All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1205Open in IMG/M
3300003321|soilH1_10155161All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria6581Open in IMG/M
3300003321|soilH1_10192955All Organisms → cellular organisms → Bacteria → Proteobacteria1976Open in IMG/M
3300003324|soilH2_10171441All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium3116Open in IMG/M
3300004463|Ga0063356_101247063All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1083Open in IMG/M
3300005327|Ga0070658_10006691All Organisms → cellular organisms → Bacteria → Proteobacteria9334Open in IMG/M
3300005327|Ga0070658_10020419All Organisms → cellular organisms → Bacteria → Proteobacteria5309Open in IMG/M
3300005331|Ga0070670_100022083All Organisms → cellular organisms → Bacteria → Proteobacteria5478Open in IMG/M
3300005337|Ga0070682_100243004All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1293Open in IMG/M
3300005344|Ga0070661_100043356All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium3286Open in IMG/M
3300005344|Ga0070661_100540257All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium937Open in IMG/M
3300005344|Ga0070661_100759236All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium793Open in IMG/M
3300005434|Ga0070709_10667179All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales806Open in IMG/M
3300005435|Ga0070714_100006300All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales9144Open in IMG/M
3300005457|Ga0070662_100788350All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium807Open in IMG/M
3300005458|Ga0070681_10012551All Organisms → cellular organisms → Bacteria → Proteobacteria8408Open in IMG/M
3300005458|Ga0070681_11721760All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium553Open in IMG/M
3300005530|Ga0070679_100037491All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium4817Open in IMG/M
3300005530|Ga0070679_101054331All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium757Open in IMG/M
3300005530|Ga0070679_101465463All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300005563|Ga0068855_101071475All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium844Open in IMG/M
3300005564|Ga0070664_100016888All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5990Open in IMG/M
3300005564|Ga0070664_100606889All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1015Open in IMG/M
3300005578|Ga0068854_100785339All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium829Open in IMG/M
3300005614|Ga0068856_101212095All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300005834|Ga0068851_10099251All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1543Open in IMG/M
3300005834|Ga0068851_10585217All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium678Open in IMG/M
3300006173|Ga0070716_100684895All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium781Open in IMG/M
3300006175|Ga0070712_100061495All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2653Open in IMG/M
3300006237|Ga0097621_101960323All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium559Open in IMG/M
3300006642|Ga0075521_10538417All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium573Open in IMG/M
3300006755|Ga0079222_10239545All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1130Open in IMG/M
3300006806|Ga0079220_10095327All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1530Open in IMG/M
3300006806|Ga0079220_10724697All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium736Open in IMG/M
3300006914|Ga0075436_100071608All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2397Open in IMG/M
3300009174|Ga0105241_10484900All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1100Open in IMG/M
3300009174|Ga0105241_11232147All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium710Open in IMG/M
3300009545|Ga0105237_10402878All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300009545|Ga0105237_10761680All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium975Open in IMG/M
3300009545|Ga0105237_11303030All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium733Open in IMG/M
3300009545|Ga0105237_12035064All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium583Open in IMG/M
3300009551|Ga0105238_10019490All Organisms → cellular organisms → Bacteria6908Open in IMG/M
3300010361|Ga0126378_10020242All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria5727Open in IMG/M
3300010371|Ga0134125_10261312All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1923Open in IMG/M
3300010373|Ga0134128_10378900All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1580Open in IMG/M
3300010373|Ga0134128_10984959All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium932Open in IMG/M
3300010375|Ga0105239_13466805All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium513Open in IMG/M
3300010396|Ga0134126_11190907All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium847Open in IMG/M
3300010397|Ga0134124_12604726All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium548Open in IMG/M
3300010399|Ga0134127_10261002All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1647Open in IMG/M
3300012931|Ga0153915_10549678All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga vignae1324Open in IMG/M
3300012957|Ga0164303_11475927All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium512Open in IMG/M
3300012960|Ga0164301_11062289All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium641Open in IMG/M
3300012971|Ga0126369_10739573All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1063Open in IMG/M
3300013100|Ga0157373_10288744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga vignae1163Open in IMG/M
3300013100|Ga0157373_10417469All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium963Open in IMG/M
3300013104|Ga0157370_11543333All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium597Open in IMG/M
3300013104|Ga0157370_12041369All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium514Open in IMG/M
3300013105|Ga0157369_11734453All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium634Open in IMG/M
3300013307|Ga0157372_11146575All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium899Open in IMG/M
3300016422|Ga0182039_12061193All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium525Open in IMG/M
3300021560|Ga0126371_10601202All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1249Open in IMG/M
3300024232|Ga0247664_1086498All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium725Open in IMG/M
3300025321|Ga0207656_10050123All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1802Open in IMG/M
3300025911|Ga0207654_11387825All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium512Open in IMG/M
3300025912|Ga0207707_10291561All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1412Open in IMG/M
3300025912|Ga0207707_11247198All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium600Open in IMG/M
3300025913|Ga0207695_10014760All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Filomicrobium insigne9232Open in IMG/M
3300025913|Ga0207695_11678629All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium516Open in IMG/M
3300025914|Ga0207671_10261758All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300025914|Ga0207671_10993846All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium661Open in IMG/M
3300025920|Ga0207649_10329148All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300025925|Ga0207650_10045319All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium3236Open in IMG/M
3300025925|Ga0207650_11325210All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium613Open in IMG/M
3300025929|Ga0207664_10971572All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium761Open in IMG/M
3300025945|Ga0207679_10152918All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1880Open in IMG/M
3300025949|Ga0207667_10116152All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2758Open in IMG/M
3300025949|Ga0207667_10782575All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium952Open in IMG/M
3300025949|Ga0207667_11108952All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium774Open in IMG/M
3300025949|Ga0207667_11362984All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium684Open in IMG/M
3300026078|Ga0207702_10050649All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium3506Open in IMG/M
3300026078|Ga0207702_10335408All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1443Open in IMG/M
3300026142|Ga0207698_11506679All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium688Open in IMG/M
3300027775|Ga0209177_10023329All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1553Open in IMG/M
3300031561|Ga0318528_10239451All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium973Open in IMG/M
3300031573|Ga0310915_11147615All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium539Open in IMG/M
3300031744|Ga0306918_11514949All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium512Open in IMG/M
3300031771|Ga0318546_11187810All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium536Open in IMG/M
3300031799|Ga0318565_10444117All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium628Open in IMG/M
3300031912|Ga0306921_11751509All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium670Open in IMG/M
3300031938|Ga0308175_100007873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria7794Open in IMG/M
3300031938|Ga0308175_100029516All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium4510Open in IMG/M
3300031938|Ga0308175_100967925All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium939Open in IMG/M
3300031938|Ga0308175_102977087All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium527Open in IMG/M
3300031939|Ga0308174_10010028All Organisms → cellular organisms → Bacteria → Proteobacteria5407Open in IMG/M
3300031939|Ga0308174_11268685All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium629Open in IMG/M
3300031941|Ga0310912_10774775All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium742Open in IMG/M
3300031941|Ga0310912_10945906All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium662Open in IMG/M
3300031996|Ga0308176_10546777All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga vignae1183Open in IMG/M
3300032001|Ga0306922_10841027All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium957Open in IMG/M
3300032074|Ga0308173_10171502All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1776Open in IMG/M
3300032205|Ga0307472_100560382All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1000Open in IMG/M
3300033412|Ga0310810_10347311All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1563Open in IMG/M
3300033480|Ga0316620_10125210All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium2007Open in IMG/M
3300033480|Ga0316620_10856780All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium875Open in IMG/M
3300033513|Ga0316628_100183332All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2495Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere12.15%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere12.15%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere9.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.48%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere7.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.54%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil5.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.74%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil3.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.80%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.80%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.87%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.93%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.93%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.93%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.93%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.93%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006642Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-DEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11615J12901_1169543823300000953SoilMTMQADVEIGPIQGQLLRLSERRQVAIYLRQGKLWIADFIDDHGELVEPETWFRFNCGWQAPDGLHRMLLESALPLFSEIVAKIERMHQEDRP*
soilL2_1018454423300003319Sugarcane Root And Bulk SoilMRRDEHEGGWQIQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLFESATPLYSELASRIEQLHRMSPNTAQREAPP*
soilH1_1015516183300003321Sugarcane Root And Bulk SoilMERIDRDDPPIQGQLLRRSERREVAIYLRDGVLWIADFVDGVGQLAEPEAWFRFNCGTPWARRAHRRMLFESATPLSADLVARIERLHHASLAAAQENEQPP*
soilH1_1019295523300003321Sugarcane Root And Bulk SoilMLPALVRRGRRIDRNMDRTDESTTLQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLFESATPLYSELASRIEQLHRMSPNTAQREAPP*
soilH2_1017144123300003324Sugarcane Root And Bulk SoilMRRDEHEGGWQIQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLFESATPLYSELASRIEQLHRTSPNTAQREAPP*
Ga0063356_10124706323300004463Arabidopsis Thaliana RhizosphereMNSTDIDRAPVIQGQLLRRSERREVAIYLRDGKLWIADFVDGVGELIEPGDWFRFNCGTPWARRAHRRMLFEAATPLSVELAARIERLHARSADVVENPRPP*
Ga0070658_1000669153300005327Corn RhizosphereMDRTDDASSIQGQILRRSERREVAIYLRDGELWIADFIDGIGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSSDLAARIERLHEPPAGDETERPP*
Ga0070658_1002041933300005327Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP*
Ga0070670_10002208323300005331Switchgrass RhizosphereMNSGDDDSSRLQGQLLRRSERHEVAIYLRDGTLWIADFIDGVGELIEPAAWFRFNCATLRARRAHRRMLLESAMPLSAELAAKIENLHRALSGISAVNEPPL*
Ga0070682_10024300413300005337Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEVWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP*
Ga0070661_10004335623300005344Corn RhizosphereRADESPTMQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP*
Ga0070661_10054025723300005344Corn RhizosphereMMIVGPERVRPKASMATGDPDGRFPIQGQLLRRSERHEVAIYLRDGRLWVADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFEAATPLSVELAARIERLHGPSADVEENPRPP*
Ga0070661_10075923613300005344Corn RhizosphereMDPSDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0070709_1066717913300005434Corn, Switchgrass And Miscanthus RhizosphereMDPTDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0070714_10000630013300005435Agricultural SoilDPTDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0070662_10078835023300005457Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP*
Ga0070681_1001255123300005458Corn RhizosphereMDRTDDAASIQGQILRRSERREVAIYLRDGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESATPLSADLAARIERLHHQGANCGDASERPP*
Ga0070681_1172176013300005458Corn RhizosphereESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0070679_10003749123300005530Corn RhizosphereMDPADESASIQGQLLRRSERREVAIYLRDGKLWIADFVDGIGELIDPAAWFRFNCGTPWARRAHRRMLFESATPLSAELAARIERLHHPSADRGEASERPP*
Ga0070679_10105433123300005530Corn RhizosphereMERAGESPSIQGQLLRRSERREVAIYLRDGELWIADFIDGIGELIEPAVWFRFNCGTPSARRAHRRTLFESAVPLSADLAAKIEDLHHPPRGSGGGDTEPG*
Ga0070679_10146546313300005530Corn RhizosphereVARADESPSIQGQLLRRSERREVAIYLREGQLWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESAVPLSTELAARIECLHCASPVDSENREDPR*
Ga0068855_10107147523300005563Corn RhizosphereMDPTDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGDLIEPVAWFRFNCATPWARRAHRRMLFESATPLSADLAARIERLHHPRADDGEESERPP*
Ga0070664_10001688823300005564Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESATPLYDELVSRIEQLHCASPDIADSEAPP*
Ga0070664_10060688923300005564Corn RhizosphereMDPADESASIQGQLLRRSERREVAIYLRDGKLWIADFVDGIGELIDPAAWFRFNCGTPWARRAHRRMLFESATPLSADLAARIERLHHTSADRGEASERPP*
Ga0068854_10078533923300005578Corn RhizosphereLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0068856_10121209523300005614Corn RhizosphereERAGESPSIQGQLLRRSERREVAIYLRDGELWIADFIDGIGELIEPAVWFRFNCGTPSARRAHRRTLFESAVPLSADLAAKIEDLHHPPRGSGGGDTEPG*
Ga0068851_1009925113300005834Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKLWIADFVDGVGELIEPGDWFRFNCGTPWARRAHRRMLFEAATPLSVELAARIERLH
Ga0068851_1058521713300005834Corn RhizosphereMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP*
Ga0070716_10068489523300006173Corn, Switchgrass And Miscanthus RhizosphereMATGDPDGRFPIQGQLLRRSERHEVAIYLRDGRLSVADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLMEAATPLSVELAARIERLHGPSADVEENPRPP*
Ga0070712_10006149533300006175Corn, Switchgrass And Miscanthus RhizosphereMATGDPDGRFPIQGQLLRRSERHEVAIYLRDGRLWVADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLMEAATPLSVELAARIERLHGPSADVEENPRPP*
Ga0097621_10196032323300006237Miscanthus RhizosphereQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0075521_1053841713300006642Arctic Peat SoilMSSIQGQLLRLSERREVAIYLRQDSIWIADFIDGCGELIEPAIWFRFNCGAPATEQARNRLLLESAMPLSAGLAARIEFLHRLGLH
Ga0079222_1023954513300006755Agricultural SoilSERDMDWADDASSIQGQILRRSERREVAIYLRDGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSADLAARIERLHHPPADSLESSERPP*
Ga0079220_1009532723300006806Agricultural SoilMDWADDASSIQGQILRRSERREVAIYLRDGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSADLAARIERLHHPPADSLESSERPP*
Ga0079220_1072469713300006806Agricultural SoilMDRADESPTMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQ
Ga0075436_10007160833300006914Populus RhizosphereVTSQAPIAQTGAVASPCDRDHVDENPSIQGQLLRRSERREVAIYLRSGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESATPLSPELAARIERLHEPPAGDETERPP*
Ga0105241_1048490023300009174Corn RhizosphereVSGRRYRNAADEAQSMDPTDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0105241_1123214713300009174Corn RhizosphereRPKASMATGDPDGRFPIQGQLLRRSERHEVAIYLRDGRLWVADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLIEAATPLSVELAARIERLHGPSADVEENPRPP*
Ga0105237_1040287823300009545Corn RhizosphereQILRRSERREVAIYLRDGELWIADFIDGIGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSSDLAARIERLHEPPAGDETERPP*
Ga0105237_1076168013300009545Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESATPLYDELVSRIEQLHCASPDIADS
Ga0105237_1130303023300009545Corn RhizosphereRRSERREVAIYLRDGKVWIADFIDGVGELIEPEVWFRFNCGTPWARRAHRRMLIEAATPLSVELAARIERLHGPSADVEENPRPP*
Ga0105237_1203506423300009545Corn RhizosphereLRRSERREVAIYLRDGQLWIADFIDGVGELIEPASWFRFNCGTPWARRANRRMVIESATPLSSELAARIERLHHPPADSGEATERPP*
Ga0105238_1001949023300009551Corn RhizosphereMDRADESATMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP*
Ga0126378_1002024223300010361Tropical Forest SoilMDLDPDNRATGTIQGQLLRLSKRREVAIYLREGSLWIADFIDGHGELVEPRIWFRFNCATTGKGHARRRMLLESAVPLSAELAVKIESLHRPPVVSCKEEEP*
Ga0134125_1026131233300010371Terrestrial SoilMDRTDETSTIQGQLLRQSERREVAIYLRDGQLWIADFIDGVGELIEPTAWFRFNCATPWARRAHRRMLFESAVPLSTELATRIEDLHQAPRRSSDGDEESGRRHP*
Ga0134128_1037890023300010373Terrestrial SoilMDPADESASIQGQILRRSERREVAIYLRDGKLWIADFVDGIGELIDPAAWFRFNCGTPWARRAHRRMLFESATPLSADLAARIERLHHTSADRGEASERPP*
Ga0134128_1098495923300010373Terrestrial SoilMDRVDESSTIQGQLLRQSERREVAIYLRDGQLWVADFIDGVGELIEPAAWFRFNCATPWARRAHRRMLFESAVPLSAELASRIEDLHHTNRRSSDCDEESGRRHP*
Ga0105239_1346680523300010375Corn RhizosphereRREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP*
Ga0134126_1119090733300010396Terrestrial SoilMDPADESASIQGQLLRRSERREVAIYLRDGKLWIADFVDGIGELIDPAAWFRFNCGTPWARRAHRRMLFESATPLSAELAARIERLHHPSADRGEASER
Ga0134124_1260472623300010397Terrestrial SoilVDPIDPSQSIQGQLLRRSERREVAIYLRDGELWIADFIDGVGELMEPAAWFRFNCGTPWAHRAHRRMLFESAMPLSAELVSRIEV
Ga0134127_1026100223300010399Terrestrial SoilVSGRRYRNAADEAQSMDPSDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP*
Ga0153915_1054967823300012931Freshwater WetlandsGMDDNADEDGAPPIQGQLLRRSGRREVAIYLRDGRLWIADFIDGHGELVEPAAWFRFNCGTPWARRAHGRMRFESAAPLSAELASRIEDLHRASAVARDRGEEPP*
Ga0164303_1147592723300012957SoilQGQLLRRSERREVAIYLRDGELWIADYIDGIGELIEPAVWFRFNCGTPWARRAHRRTLFESAVPLSADLAARIEDLHHPPRGSGGGDMEPGGG*
Ga0164301_1106228923300012960SoilMERAAESPSIQGQLLRRSERREVAIYLRDGELWIADFIDGIGELIEPAVWFRFNCGTPWARRAHRRTLFESAVPLSADLAARIEDLHHPPRGSGGGDMEPGGG*
Ga0126369_1073957323300012971Tropical Forest SoilMDLDPQDPRASPILGQLLRLSKRRQVAIYLREGSLCIADFIDGRGELVDPKIWFRFNCATTGTGLARRRMLLESAVPLCAELVAKIESLHRPSTVSRKEDGP*
Ga0157373_1028874413300013100Corn RhizosphereSIQGHVLRRSERREVAIYLRDGELWIADFIDGIGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSSDLAARIERLHEPPAGDETERPP*
Ga0157373_1041746913300013100Corn RhizosphereMDRTDDAASIQGQILRRSERREVAIYLRDGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESATPLSADLAARIERLHHPSADRGEASERPP*
Ga0157370_1154333313300013104Corn RhizosphereMDRADESATMQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESATPLYDELVSRIEQLHCASPDIADSEAPP*
Ga0157370_1204136923300013104Corn RhizosphereMDRVDESSTIQGQLLRQSERREVAIYLRDGQLWIADFIDGVGELIEPAAWFRFNCATPWARRAHRRMLFESAVPLSAELASRIEDLHQAPRRSSDGDEESGRRHP*
Ga0157369_1173445313300013105Corn RhizosphereMGHADECSSIQGQLLRRSERREVAIYLRDGQLWIADFIDGVGELIEPASWFRFNCGTPWARRANRRMVIESATPLSSELAARIERLHHPPADSGEATERPP*
Ga0157372_1114657523300013307Corn RhizosphereMDRVDESSTIQGQLLRQSERREVAIYLRDGQLWIADFIDGVGELIEPAAWFRFNCATPWARRAHRRMLFESAVPLSAELASRIEDL
Ga0182039_1206119323300016422SoilLRLSKRREVATYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIERLHHPNAVSSKENRS
Ga0126371_1060120213300021560Tropical Forest SoilQLLRLSKRREVAIYLREGSLWIADFIDGHGELVEPRIWFRFNCATTGKGHARRRMLLESAVPLSAELAVKIESLHRPPVVSCKEEEP
Ga0247664_108649823300024232SoilLLRLSERRQVAIYLRQGKLWIADFIDDHGELVEPETWFRFNCGWQAPDGLHRMLLESALPLFSEIVAKIERMHQEDRP
Ga0207656_1005012323300025321Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIEQLHCASPDIADSEAPP
Ga0207654_1138782513300025911Corn RhizosphereADEAQSMDPSDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP
Ga0207707_1029156123300025912Corn RhizosphereMDPADESASIQGQLLRRSERREVAIYLRDGKLWIADFVDGIGELIDPAAWFRFNCGTPWARRAHRRMLFESATPLSAELAARIERLHHPSADRGEASERPP
Ga0207707_1124719813300025912Corn RhizospherePTYRESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP
Ga0207695_1001476063300025913Corn RhizosphereMERAGESPSIQGQLLRRSERREVAIYLRDGELWIADFIDGIGELIEPAVWFRFNCGTPSARRAHRRTLFESAVPLSADLAAKIEDLHHPPRGSGGGDTEPG
Ga0207695_1167862923300025913Corn RhizosphereMDPTDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRA
Ga0207671_1026175823300025914Corn RhizosphereRSERREVAIYLRDGELWIADFIDGIGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSSDLAARIERLHEPPAGDETERPP
Ga0207671_1099384623300025914Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRI
Ga0207649_1032914813300025920Corn RhizosphereLRRSERREVAIYLREGQLWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESAVPLSTELAARIECLHCASPVDSENREDPR
Ga0207650_1004531923300025925Switchgrass RhizosphereMNSGDDDSSRLQGQLLRRSERHEVAIYLRDGTLWIADFIDGVGELIEPAAWFRFNCATLRARRAHRRMLLESAMPLSAELAAKIENLHRALSGISAVNEPPL
Ga0207650_1132521013300025925Switchgrass RhizosphereMRRRGRRAVQTGYNMDHADESPPIQGQLLRRSERREVAIYLREGQLWIADFIDGIGELIEPEAWFRFNCGTPWARRAHRRMLFESAVPLSADLA
Ga0207664_1097157213300025929Agricultural SoilEAQSMDPTDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP
Ga0207679_1015291823300025945Corn RhizosphereMDRADESPTMQGQLLRRSERREVAIYLRDGKVWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESAIPLYDELASRIE
Ga0207667_1011615223300025949Corn RhizosphereMERAGESPSIQGQLLRRSERREVAIYLRDGELWIADFIDGIGELIEPAVWFRFNCGTPSARRAHRRTLFESAVPLSADLAAKIEDLHHPPRGSG
Ga0207667_1078257523300025949Corn RhizosphereVDPTDEPLSIQGQLLRRSERREVAIYLRDGKLWIADFIDGVGEIIEPAAWFRFNCGTPWARRAHRRMLFESATPLSAELAARIERLHHLASHEGEDRERPP
Ga0207667_1110895213300025949Corn RhizosphereMDPTDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGDLIEPVAWFRFNCATPWARRAHRRMLFESATPLSADLAARIERLHHPRADDGEESERPP
Ga0207667_1136298413300025949Corn RhizosphereMATGDPDGRFPIQGQLLRRSERHEVAIYLRDGRLWVADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLIEAATPLSVELAARIERLHG
Ga0207702_1005064923300026078Corn RhizosphereMDPSDESSPIQGQLLRQSERREVAIYLRDGQLWIADFIDGIGELIEPVSWFRFNCATPWARRAHRRMLFESATPLSTELAARIERLHHPRADCDHASERPP
Ga0207702_1033540823300026078Corn RhizosphereMDPADESASIQGQILRRSERREVAIYLRDGKLWIADFVDGVGELIDPAAWFRFNCGTPWARRAHRRMLFESATPLSAELAARIERLHHPSADRGEASERPP
Ga0207698_1150667923300026142Corn RhizosphereMDPADESASIQGQILRRSERREVAIYLRDGKLWIADFVDGIGELIDPAAWFRFNCATPWARRAHRRMLFESATPLSAELAARIERLHHPSADRGEASERPP
Ga0209177_1002332923300027775Agricultural SoilMDWADDASSIQGQILRRSERREVAIYLRDGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSADLAARIERLHHPPADSLESSERPP
Ga0318528_1023945113300031561SoilMDLDPQNFRVSPILGQLLRLSKRREVAIYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIERLHHPNAVSSKENRS
Ga0310915_1114761523300031573SoilMDLDPQNFRVSPILGQLLRLSKRREVAIYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIER
Ga0306918_1151494913300031744SoilRVSPILGQLLRLSKRREVAIYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIERLHHPNAVSSKENRS
Ga0318546_1118781023300031771SoilPILGQLLRLSKRREVAIYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIERLHHPNAVSSKENRS
Ga0318565_1044411723300031799SoilMDLDPQNFRVSPILGQLLRLSKRREVAIYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIERLH
Ga0306921_1175150913300031912SoilVDINLENRLPGFVQGQLLRRNERREVAIYLRDNVLWIADFIDGHGELIDPVSWFRFNCGGPTTWPVQRRMLLESAVPLSTELAAKIERLHCPDAVSCKEDRS
Ga0308175_10000787323300031938SoilMDRADESSTIQGQLLRQSERREVAIYLRNGTLWIADFINGVGELIDPPTWFRFNCGTPWARRAHRRILFESATPLSVELAERIERLHTSPAQLAETDPTQAAPIKGAAGT
Ga0308175_10002951643300031938SoilVKSHASIAPTGAIHTGCDMDRVDENPSIQGQLLRRSERREVAIYLRSGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHHRMLFESATPLSVDLATRIERLHHPCAERADECEQPP
Ga0308175_10096792523300031938SoilVTSQAPIAQTGAVASPCDGDHVDENPSIQGQLLRRSERREVAIYLRSGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESATPLSIDLATRIERLHHPSADRGEASERPP
Ga0308175_10297708713300031938SoilADESPTMQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESATPLYDELVSRIEQLHCASPDIADSEAPP
Ga0308174_1001002833300031939SoilMTSQAPITQTGAVASPCDGDHVDENPSIQGQLLRRSERREVAIYLRSGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESAMPLSADLATRIERLHRPRADRADESEQPP
Ga0308174_1126868513300031939SoilMDRADESSTIQGQLLRQSERREVAIYLRNGTLWIADFINGVGELIDPPTWFRFNCGTPWARRAHRRILFESATPLSVELAERIERLHTSPAQLAETDPTQAAPI
Ga0310912_1077477513300031941SoilPGFVQGQLLRRNERREVAIYLRDNVLWIADFIDGHGELIDPVSWFRFNCGGPTTWPVQRRMLLESAVPLSTELAAKIERLHCPDAVSCKEDRS
Ga0310912_1094590623300031941SoilMDPDPQNPRISPILGQLLQLSKRREVAIYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIERLHHPNAVSSKENRS
Ga0308176_1054677723300031996SoilNAEPNVTSQAPIAQTGAVASPCDGDHVDENPSIQGQLLRRSERREVAIYLRSGELWIADFIDGVGELIEPAAWFRFNCGTPWARRAHRRMLFESATPLSIDLATRIERLHHPSADRGEASERPP
Ga0306922_1084102713300032001SoilLADEDSRMDLDPQNFRVSPILGQLLRLSKRREVAIYLRDGSLWIADFIDGHGELVEPKIWFRFNCATAGKGLARRRMLLESAVPLSAELAAKIERLHHPNAVSSKENRS
Ga0308173_1017150223300032074SoilMDRTDESPTMQGQLLRRSERREVAIYLRDGKLWIADFIDGVGELIEPEAWFRFNCGTPWARRAHRRMLVESATPLYDELVSRIEQLHCASPDIADSEAPP
Ga0307472_10056038223300032205Hardwood Forest SoilMDLDPQNSRASLILGQLLRLSNRREVAIYLRDGSLWIADFIDGHGELVDPAAWFRFNCGSPTARQSRRRMLLESAFPLSAELAAKIESLHCPDA
Ga0310810_1034731123300033412SoilMNSTDIDRAPVIQGQLLRRSERREVAIYLRDGKLWIADFVDGVGELIEPGDWFRFNCGTPWARRAHRRMLFEAATPLSVELAARIERLHARSADVVENPRPP
Ga0316620_1012521023300033480SoilMSNAERERGTSIQGQLLRRSDRRQVAIYLRNGEIWIADFIDGIGELTDPAAWFRFNCGTAWAPHAVRRMLLESAMPLSAELVARIERLHGASLGSGDESAR
Ga0316620_1085678023300033480SoilMDDNADEDGAPPIQGQLLRRSGRREVAIYLRDGRLWIADFIDGHGELVEPAAWFRFNCGTPWARRAHGRMRFESAAPLSAELASRIEDLHRASAVACDRGEEPP
Ga0316628_10018333223300033513SoilMDDNADEDGAPPIQGQLLRRSGRREVAIYLRDGRLWIADFIDGHGELVEPAAWFRFNCGTPWARRAHGRMRFESAAPLSAELASRIEDLHRASAVARDRGEEPP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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